ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet96h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-117
2dbj|AK099815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-117
3dbj|AK061385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-117
4gb|BT017217.1| Zea mays clone EL01N0372E04.c mRNA sequence 295 7e-77
5gb|AY105157.1| Zea mays PCO115092 mRNA sequence 295 7e-77
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
7dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
8gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete s... 54 4e-04
9gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 46 0.11
10ref|NM_193865.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
11emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 6.5
12emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cl... 40 6.5
13emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for bi... 40 6.5
14emb|AJ252202.1|DME252202 Drosophila melanogaster D-COQ7 gene for... 40 6.5
15emb|CR382291.11| Zebrafish DNA sequence from clone CH211-245G10,... 40 6.5
16gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.5
17gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell... 40 6.5
18ref|NM_132121.2| Drosophila melanogaster shifted CG3135-RA (shf)... 40 6.5
19gb|AY051622.1| Drosophila melanogaster GH27042 full length cDNA 40 6.5
20tpg|BK000323.1| TPA: TPA_exp: Oryza sativa (indica cultivar-grou... 40 6.5
21dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
23dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
24dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
25gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 ... 40 6.5
26emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chro... 40 6.5 
>dbj|AK104375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G04, full
           insert sequence
          Length = 1133

 Score =  428 bits (216), Expect = e-117
 Identities = 364/410 (88%), Gaps = 5/410 (1%)
 Strand = Plus / Plus

                                                                       
Query: 79  ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccgcgccg 138
           |||| |||||||||| |  | ||||||| || |||||||||||||||||||| |||||||
Sbjct: 24  ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 83

                                                                       
Query: 139 tcgcc---agctcgccctcctctctcagcgtgggcaccaaggtcttcgtcgggctgaagg 195
            ||||   ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 84  ccgccgccagcgcgccctcatctctcagcgtgggcaccaaggtcttcgtcgggttgaagg 143

                                                                       
Query: 196 cgcagacgaggctcggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctaca 255
           | ||||| | ||| |||||||| ||||||||||||||||| |||| |||| |||||||||
Sbjct: 144 cccagaccaagctaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctaca 203

                                                                       
Query: 256 ccgccgtcaaccggagggtctcccttgggttgtcaaacaagagggctaccagggcacgca 315
           ||||||||||||||||| |||| || || || ||||||||||||||||||||||| ||||
Sbjct: 204 ccgccgtcaaccggaggatctctctgggattatcaaacaagagggctaccagggcgcgca 263

                                                                       
Query: 316 tttcaatgatgcctgtcggcacaccacgggtaccttacagaacacctggtgaaggaacct 375
           |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 264 tttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaactt 323

                                                                       
Query: 376 ggcagtggcttgacatatggaatgctttatatcgtgaacggattatcttcattggggaca 435
           |||| |||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 324 ggcaatggcttgatatatggaatgctctatatcgcgaacgaattatcttcattggggaca 383

                                                             
Query: 436 atattgatgaagaattcagtaacc-agtactggc-agcatgctgtatctt 483
            ||| |||||||| || ||||||| |||| |||| |||||| ||||||||
Sbjct: 384 gtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatctt 433
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>dbj|AK099815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099L17, full
           insert sequence
          Length = 1243

 Score =  428 bits (216), Expect = e-117
 Identities = 364/410 (88%), Gaps = 5/410 (1%)
 Strand = Plus / Plus

                                                                       
Query: 79  ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccgcgccg 138
           |||| |||||||||| |  | ||||||| || |||||||||||||||||||| |||||||
Sbjct: 42  ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 101

                                                                       
Query: 139 tcgcc---agctcgccctcctctctcagcgtgggcaccaaggtcttcgtcgggctgaagg 195
            ||||   ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 102 ccgccgccagcgcgccctcatctctcagcgtgggcaccaaggtcttcgtcgggttgaagg 161

                                                                       
Query: 196 cgcagacgaggctcggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctaca 255
           | ||||| | ||| |||||||| ||||||||||||||||| |||| |||| |||||||||
Sbjct: 162 cccagaccaagctaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctaca 221

                                                                       
Query: 256 ccgccgtcaaccggagggtctcccttgggttgtcaaacaagagggctaccagggcacgca 315
           ||||||||||||||||| |||| || || || ||||||||||||||||||||||| ||||
Sbjct: 222 ccgccgtcaaccggaggatctctctgggattatcaaacaagagggctaccagggcgcgca 281

                                                                       
Query: 316 tttcaatgatgcctgtcggcacaccacgggtaccttacagaacacctggtgaaggaacct 375
           |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 282 tttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaactt 341

                                                                       
Query: 376 ggcagtggcttgacatatggaatgctttatatcgtgaacggattatcttcattggggaca 435
           |||| |||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 342 ggcaatggcttgatatatggaatgctctatatcgcgaacgaattatcttcattggggaca 401

                                                             
Query: 436 atattgatgaagaattcagtaacc-agtactggc-agcatgctgtatctt 483
            ||| |||||||| || ||||||| |||| |||| |||||| ||||||||
Sbjct: 402 gtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatctt 451
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>dbj|AK061385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-A01, full
           insert sequence
          Length = 1133

 Score =  428 bits (216), Expect = e-117
 Identities = 364/410 (88%), Gaps = 5/410 (1%)
 Strand = Plus / Plus

                                                                       
Query: 79  ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccgcgccg 138
           |||| |||||||||| |  | ||||||| || |||||||||||||||||||| |||||||
Sbjct: 24  ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 83

                                                                       
Query: 139 tcgcc---agctcgccctcctctctcagcgtgggcaccaaggtcttcgtcgggctgaagg 195
            ||||   ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 84  ccgccgccagcgcgccctcatctctcagcgtgggcaccaaggtcttcgtcgggttgaagg 143

                                                                       
Query: 196 cgcagacgaggctcggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctaca 255
           | ||||| | ||| |||||||| ||||||||||||||||| |||| |||| |||||||||
Sbjct: 144 cccagaccaagctaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctaca 203

                                                                       
Query: 256 ccgccgtcaaccggagggtctcccttgggttgtcaaacaagagggctaccagggcacgca 315
           ||||||||||||||||| |||| || || || ||||||||||||||||||||||| ||||
Sbjct: 204 ccgccgtcaaccggaggatctctctgggattatcaaacaagagggctaccagggcgcgca 263

                                                                       
Query: 316 tttcaatgatgcctgtcggcacaccacgggtaccttacagaacacctggtgaaggaacct 375
           |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 264 tttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaactt 323

                                                                       
Query: 376 ggcagtggcttgacatatggaatgctttatatcgtgaacggattatcttcattggggaca 435
           |||| |||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 324 ggcaatggcttgatatatggaatgctctatatcgcgaacgaattatcttcattggggaca 383

                                                             
Query: 436 atattgatgaagaattcagtaacc-agtactggc-agcatgctgtatctt 483
            ||| |||||||| || ||||||| |||| |||| |||||| ||||||||
Sbjct: 384 gtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatctt 433
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>gb|BT017217.1| Zea mays clone EL01N0372E04.c mRNA sequence
          Length = 1252

 Score =  295 bits (149), Expect = 7e-77
 Identities = 308/361 (85%)
 Strand = Plus / Plus

                                                                       
Query: 100 cggcgcccgccaactcctcctgcttccacccccgcgccgtcgccagctcgccctcctctc 159
           ||||||| |||| |||||| ||||||||||| |||||   ||||||| |||| || ||||
Sbjct: 51  cggcgccggccagctcctcatgcttccacccacgcgcgaccgccagcccgccgtcttctc 110

                                                                       
Query: 160 tcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgtcag 219
           ||||||| ||||||||||||||||||||||| | ||||||||| | |||||| ||||| |
Sbjct: 111 tcagcgtcggcaccaaggtcttcgtcgggctcagggcgcagaccaagctcggttcgtcgg 170

                                                                       
Query: 220 agtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtctccc 279
           ||||||| |||||||| |||| |||  ||||| |||| || |||||||||||  |||| |
Sbjct: 171 agtcgtcatgcccgaatgtcagcgctgggttccacactgcggtcaaccggagaatctctc 230

                                                                       
Query: 280 ttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacac 339
           |  ||||||| || |||| ||| ||||| || ||||| || ||||||||| | || || |
Sbjct: 231 tcaggttgtccaaaaagaaggcgaccagagcccgcatctcgatgatgcctattggtactc 290

                                                                       
Query: 340 cacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatg 399
           |||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 291 cacgtgtgccttaccgaacacctggtgaaggaacctggcaatggcttgacatatggaacg 350

                                                                       
Query: 400 ctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc 459
           || | || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 351 ctctgtaccgtgagcggattatcttcattggggacaatatagatgaagaattcagcaacc 410

            
Query: 460 a 460
           |
Sbjct: 411 a 411
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>gb|AY105157.1| Zea mays PCO115092 mRNA sequence
          Length = 481

 Score =  295 bits (149), Expect = 7e-77
 Identities = 308/361 (85%)
 Strand = Plus / Plus

                                                                       
Query: 100 cggcgcccgccaactcctcctgcttccacccccgcgccgtcgccagctcgccctcctctc 159
           ||||||| |||| |||||| ||||||||||| |||||   ||||||| |||| || ||||
Sbjct: 54  cggcgccggccagctcctcatgcttccacccacgcgcgaccgccagcccgccgtcttctc 113

                                                                       
Query: 160 tcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgtcag 219
           ||||||| ||||||||||||||||||||||| | ||||||||| | |||||| ||||| |
Sbjct: 114 tcagcgtcggcaccaaggtcttcgtcgggctcagggcgcagaccaagctcggttcgtcgg 173

                                                                       
Query: 220 agtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtctccc 279
           ||||||| |||||||| |||| |||  ||||| |||| || |||||||||||  |||| |
Sbjct: 174 agtcgtcatgcccgaatgtcagcgctgggttccacactgcggtcaaccggagaatctctc 233

                                                                       
Query: 280 ttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacac 339
           |  ||||||| || |||| ||| ||||| || ||||| || ||||||||| | || || |
Sbjct: 234 tcaggttgtccaaaaagaaggcgaccagagcccgcatctcgatgatgcctattggtactc 293

                                                                       
Query: 340 cacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatg 399
           |||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 294 cacgtgtgccttaccgaacacctggtgaaggaacctggcaatggcttgacatatggaacg 353

                                                                       
Query: 400 ctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc 459
           || | || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 354 ctctgtaccgtgagcggattatcttcattggggacaatatagatgaagaattcagcaacc 413

            
Query: 460 a 460
           |
Sbjct: 414 a 414
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                           
Query: 288     tcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacaccacgggta 347
               ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 1949403 tcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtg 1949462

                                                                     
Query: 348     ccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatgct 401
               |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 1949463 ccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgct 1949516



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                           
Query: 210     ggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccgg 269
               |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||
Sbjct: 1948856 ggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccgg 1948915

                       
Query: 270     agggtctc 277
               ||| ||||
Sbjct: 1948916 aggatctc 1948923



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                         
Query: 161     cagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagac 202
               |||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1948699 cagcgtgggcaccaaggtcttcgtcgggttgaaggcccagac 1948740



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 71/81 (87%), Gaps = 2/81 (2%)
 Strand = Plus / Plus

                                                                           
Query: 405     tatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc-agta 463
               ||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||||| ||||
Sbjct: 1949630 tatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagta 1949689

                                    
Query: 464     ctggc-agcatgctgtatctt 483
                |||| |||||| ||||||||
Sbjct: 1949690 ttggcgagcatgttgtatctt 1949710



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                           
Query: 79      ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccg---cg 135
               |||| |||||||||| |  | ||||||| || |||||||||||||||||||| ||   ||
Sbjct: 1948492 ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 1948551

                                           
Query: 136     ccgtcgccagctcgccctcctctctcag 163
               ||| ||||||| ||||||| ||||||||
Sbjct: 1948552 ccgccgccagcgcgccctcatctctcag 1948579
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>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548D03
          Length = 156709

 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                         
Query: 288   tcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacaccacgggta 347
             ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 78183 tcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtg 78242

                                                                   
Query: 348   ccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatgct 401
             |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 78243 ccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgct 78296



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                         
Query: 210   ggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccgg 269
             |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||
Sbjct: 77636 ggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccgg 77695

                     
Query: 270   agggtctc 277
             ||| ||||
Sbjct: 77696 aggatctc 77703



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                       
Query: 161   cagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagac 202
             |||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 77479 cagcgtgggcaccaaggtcttcgtcgggttgaaggcccagac 77520



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 71/81 (87%), Gaps = 2/81 (2%)
 Strand = Plus / Plus

                                                                         
Query: 405   tatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc-agta 463
             ||||| ||||| ||||||||||||||||||| ||| |||||||| || ||||||| ||||
Sbjct: 78410 tatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagta 78469

                                  
Query: 464   ctggc-agcatgctgtatctt 483
              |||| |||||| ||||||||
Sbjct: 78470 ttggcgagcatgttgtatctt 78490



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                         
Query: 79    ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccg---cg 135
             |||| |||||||||| |  | ||||||| || |||||||||||||||||||| ||   ||
Sbjct: 77272 ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 77331

                                         
Query: 136   ccgtcgccagctcgccctcctctctcag 163
             ||| ||||||| ||||||| ||||||||
Sbjct: 77332 ccgccgccagcgcgccctcatctctcag 77359
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>gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete sequence
          Length = 127132

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 354   agaacacctggtgaaggaacctggcagtggcttgacatatggaatgc 400
             |||||||||||||||||||| ||||| ||| ||||  ||||||||||
Sbjct: 37162 agaacacctggtgaaggaacttggcaatgggttgatttatggaatgc 37116
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 88     cgctgtgccggacggcgcccgcc 110
              |||||||||||||||||||||||
Sbjct: 384387 cgctgtgccggacggcgcccgcc 384409
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>ref|NM_193865.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 cgccagctcgccctcctctc 159
           ||||||||||||||||||||
Sbjct: 192 cgccagctcgccctcctctc 173
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     accctcttcctccgccccgt 34
              ||||||||||||||||||||
Sbjct: 200931 accctcttcctccgccccgt 200950
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>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster
          Length = 89976

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   cgcgccgtcgccagctcgccctcc 155
             ||||||||||||||||| ||||||
Sbjct: 79820 cgcgccgtcgccagctccccctcc 79797
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>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of
             glycopeptide antibiotic teicoplanin
          Length = 89713

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   cgcgccgtcgccagctcgccctcc 155
             ||||||||||||||||| ||||||
Sbjct: 81638 cgcgccgtcgccagctccccctcc 81615
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>emb|AJ252202.1|DME252202 Drosophila melanogaster D-COQ7 gene for putative COQ7 isologue, exons
            1-3
          Length = 2586

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  gagggctaccagggcacgca 315
            ||||||||||||||||||||
Sbjct: 2457 gagggctaccagggcacgca 2438
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>emb|CR382291.11| Zebrafish DNA sequence from clone CH211-245G10, complete sequence
          Length = 159807

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   agtggcttgacatatggaat 398
             ||||||||||||||||||||
Sbjct: 82648 agtggcttgacatatggaat 82629
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 132     cgcgccgtcgccagctcgcc 151
               ||||||||||||||||||||
Sbjct: 1441102 cgcgccgtcgccagctcgcc 1441083
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>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 191590

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gagggctaccagggcacgca 315
             ||||||||||||||||||||
Sbjct: 87446 gagggctaccagggcacgca 87427
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>ref|NM_132121.2| Drosophila melanogaster shifted CG3135-RA (shf), mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  gagggctaccagggcacgca 315
            ||||||||||||||||||||
Sbjct: 1263 gagggctaccagggcacgca 1282
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>gb|AY051622.1| Drosophila melanogaster GH27042 full length cDNA
          Length = 1802

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  gagggctaccagggcacgca 315
            ||||||||||||||||||||
Sbjct: 1263 gagggctaccagggcacgca 1282
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>tpg|BK000323.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) transposon
            Rim2-M44, complete sequence
          Length = 2086

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  cgccagctcgccctcctctc 159
            ||||||||||||||||||||
Sbjct: 1490 cgccagctcgccctcctctc 1471
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    caactcctcctgcttccacc 129
              ||||||||||||||||||||
Sbjct: 419440 caactcctcctgcttccacc 419459
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 140      cgccagctcgccctcctctc 159
                ||||||||||||||||||||
Sbjct: 15430557 cgccagctcgccctcctctc 15430576
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>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0017C12
          Length = 135356

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   caactcctcctgcttccacc 129
             ||||||||||||||||||||
Sbjct: 15681 caactcctcctgcttccacc 15700
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>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045D11
          Length = 142320

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    cgccagctcgccctcctctc 159
              ||||||||||||||||||||
Sbjct: 108098 cgccagctcgccctcctctc 108117
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>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete
              sequence
          Length = 299943

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    gagggctaccagggcacgca 315
              ||||||||||||||||||||
Sbjct: 233437 gagggctaccagggcacgca 233418
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>emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chromosome X, complete
             sequence
          Length = 123180

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   caactcctcctgcttccacc 129
             ||||||||||||||||||||
Sbjct: 39066 caactcctcctgcttccacc 39085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,343,220
Number of Sequences: 3902068
Number of extensions: 3343220
Number of successful extensions: 66580
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66355
Number of HSP's gapped (non-prelim): 222
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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