ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet96h01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 74 cttccaagaagcaatcatgctgcctcgagcaccttgggcccttcgccatcatcaccacca 133 |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 65132 cttccaagaagcaatcatgctgcctcgagccgcttggccccttggccatcatcaccacca 65073 Query: 134 ccttctcctct 144 || |||||||| Sbjct: 65072 ccatctcctct 65062
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 74 cttccaagaagcaatcatgctgcctcgagcaccttgggcccttcgccatcatcaccacca 133 |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 23174940 cttccaagaagcaatcatgctgcctcgagccgcttggccccttggccatcatcaccacca 23174881 Query: 134 ccttctcctct 144 || |||||||| Sbjct: 23174880 ccatctcctct 23174870 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 28191645 gcgcctccctctcctcctcc 28191626
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 74 cttccaagaagcaatcatgctgcctcgagcaccttgggcccttcgccatcatcaccacca 133 |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 13093 cttccaagaagcaatcatgctgcctcgagccgcttggccccttggccatcatcaccacca 13034 Query: 134 ccttctcctct 144 || |||||||| Sbjct: 13033 ccatctcctct 13023
>gb|AC158310.3| Mus musculus chromosome 5, clone RP23-106N8, complete sequence Length = 218714 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 126 caccaccaccttctcctctttcctc 150 ||||||||||||||||||||||||| Sbjct: 187939 caccaccaccttctcctctttcctc 187915
>gb|AC105987.21| Mus musculus chromosome 5, clone RP24-446I1, complete sequence Length = 192043 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 126 caccaccaccttctcctctttcctc 150 ||||||||||||||||||||||||| Sbjct: 76730 caccaccaccttctcctctttcctc 76754
>gb|AC158127.3| Mus musculus chromosome 19, clone RP23-135N12, complete sequence Length = 217544 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 135 cttctcctctttcctccagcacctacttc 163 |||||||||||||||||||||||| |||| Sbjct: 113289 cttctcctctttcctccagcaccttcttc 113317
>gb|AC111065.20| Mus musculus chromosome 19, clone RP23-315E4, complete sequence Length = 193977 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 135 cttctcctctttcctccagcacctacttc 163 |||||||||||||||||||||||| |||| Sbjct: 166192 cttctcctctttcctccagcaccttcttc 166164
>ref|NM_113223.1| Arabidopsis thaliana DNA binding / transcription factor AT3G23220 mRNA, complete cds Length = 387 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttctcctct 144 |||||||||||||||||| ||||||| Sbjct: 281 ccatcatcaccaccacctcctcctct 256
>ref|NM_190609.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 gcgcctccctctcctcctcccc 70 |||||||||||||||||||||| Sbjct: 31 gcgcctccctctcctcctcccc 10
>gb|AY560847.1| Arabidopsis thaliana putative AP2/EREBP transcription factor (At3g23220) mRNA, complete cds Length = 387 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttctcctct 144 |||||||||||||||||| ||||||| Sbjct: 281 ccatcatcaccaccacctcctcctct 256
>gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosome 8, complete sequence Length = 198118 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 ctccctctcctcctcccccaacttcc 78 ||||||||||| |||||||||||||| Sbjct: 11326 ctccctctccttctcccccaacttcc 11301
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcccc 70 |||||||||||||||||||||| Sbjct: 36482946 gcgcctccctctcctcctcccc 36482967
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcccc 70 |||||||||||||||||||||| Sbjct: 134785 gcgcctccctctcctcctcccc 134806
>dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14B15 Length = 83689 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttctcctct 144 |||||||||||||||||| ||||||| Sbjct: 47043 ccatcatcaccaccacctcctcctct 47018
>emb|BX571790.8| Zebrafish DNA sequence from clone CH211-199M3 in linkage group 20, complete sequence Length = 200944 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 caccaccaccttctcctctttc 147 |||||||||||||||||||||| Sbjct: 32443 caccaccaccttctcctctttc 32422 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 caccaccaccttctcctctttc 147 |||||||||||||||||||||| Sbjct: 32245 caccaccaccttctcctctttc 32224 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ccaccaccttctcctctttc 147 |||||||||||||||||||| Sbjct: 32156 ccaccaccttctcctctttc 32137
>emb|AL929220.13| Zebrafish DNA sequence from clone DKEY-65B13 in linkage group 20, complete sequence Length = 227539 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 caccaccaccttctcctctttc 147 |||||||||||||||||||||| Sbjct: 226308 caccaccaccttctcctctttc 226287
>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence Length = 200326 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 ggagcgcctccctctcctcctccccc 71 ||||||||||||||||| |||||||| Sbjct: 152358 ggagcgcctccctctccccctccccc 152333
>emb|AL845320.10| Zebrafish DNA sequence from clone DKEY-30J19, complete sequence Length = 183417 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 caccaccaccttctcctctttc 147 |||||||||||||||||||||| Sbjct: 95047 caccaccaccttctcctctttc 95068 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 caccaccaccttctcctctttc 147 |||||||||||||||||||||| Sbjct: 94849 caccaccaccttctcctctttc 94870 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ccaccaccttctcctctttc 147 |||||||||||||||||||| Sbjct: 95157 ccaccaccttctcctctttc 95176
>gb|AC122229.4| Mus musculus BAC clone RP23-132F18 from 8, complete sequence Length = 167956 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 53 ctccctctcctcctcccccaacttcc 78 ||||||||||| |||||||||||||| Sbjct: 9617 ctccctctccttctcccccaacttcc 9642
>gb|AY974196.1| Arabidopsis thaliana clone At3g23220 AP2/EREBP transcription factor mRNA, complete cds Length = 439 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttctcctct 144 |||||||||||||||||| ||||||| Sbjct: 333 ccatcatcaccaccacctcctcctct 308
>gb|AC115508.5| Rattus norvegicus 2 BAC CH230-355B17 (Children's Hospital Oakland Research Institute) complete sequence Length = 209019 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccca 72 ||||||||||||||||||||| Sbjct: 102218 cctccctctcctcctccccca 102198
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cgcctccctctcctcctcccc 70 ||||||||||||||||||||| Sbjct: 10196471 cgcctccctctcctcctcccc 10196451 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccctctcctcctcccccaac 74 |||||||||||||||||||| Sbjct: 12229144 ccctctcctcctcccccaac 12229163
>gb|AC125576.4| Rattus norvegicus 18 BAC CH230-9F9 (Children's Hospital Oakland Research Institute) complete sequence Length = 237754 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ccctctcctcctcccccaact 75 ||||||||||||||||||||| Sbjct: 131630 ccctctcctcctcccccaact 131650
>emb|AL035468.3|HS424E5 Human DNA sequence from clone RP3-424E5 on chromosome 6q13-14.3, complete sequence Length = 93805 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cctctcctcctcccccaactt 76 ||||||||||||||||||||| Sbjct: 52222 cctctcctcctcccccaactt 52242
>gb|AC095281.6| Rattus norvegicus 4 BAC CH230-10M16 (Children's Hospital Oakland Research Institute) complete sequence Length = 228330 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 atcatcaccaccaccttctcc 141 ||||||||||||||||||||| Sbjct: 164750 atcatcaccaccaccttctcc 164730
>gb|AC183527.2| Mus musculus BAC clone RP23-30G12 from chromosome 12, complete sequence Length = 208026 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 tccctctcctcctcccccaac 74 ||||||||||||||||||||| Sbjct: 43305 tccctctcctcctcccccaac 43285
>gb|AC130805.15| Medicago truncatula clone mth2-9n1, complete sequence Length = 139054 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttctcctc 143 |||||||||||||| |||||||||| Sbjct: 85553 ccatcatcaccacctccttctcctc 85577
>gb|AC092335.2| Homo sapiens chromosome 5 clone RP11-19O2, complete sequence Length = 164819 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 tccctctcctcctcccccaac 74 ||||||||||||||||||||| Sbjct: 139965 tccctctcctcctcccccaac 139985
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cgcctccctctcctcctcccc 70 ||||||||||||||||||||| Sbjct: 57884 cgcctccctctcctcctcccc 57864
>gb|AC157591.2| Mus musculus BAC clone RP23-311C13 from chromosome 9, complete sequence Length = 213461 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccca 72 ||||||||||||||||||||| Sbjct: 16694 cctccctctcctcctccccca 16674
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cgcctccctctcctcctcccc 70 ||||||||||||||||||||| Sbjct: 10194572 cgcctccctctcctcctcccc 10194552 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccctctcctcctcccccaac 74 |||||||||||||||||||| Sbjct: 12225907 ccctctcctcctcccccaac 12225926
>gb|AC156945.2| Pan troglodytes BAC clone CH251-464H12 from chromosome unknown, complete sequence Length = 184973 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 tccctctcctcctcccccaac 74 ||||||||||||||||||||| Sbjct: 43038 tccctctcctcctcccccaac 43058
>ref|XM_577655.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2610029G23 (LOC502194), mRNA Length = 1035 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 catcatcaccaccaccttctc 140 ||||||||||||||||||||| Sbjct: 213 catcatcaccaccaccttctc 233
>emb|AL669967.12| Mouse DNA sequence from clone RP23-216M21 on chromosome X, complete sequence Length = 219583 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttctcctctttcctcc 151 ||||||||| | || |||||||||||||||||| Sbjct: 83958 ccatcatcatctcctccttctcctctttcctcc 83926
>dbj|AK109072.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-G04, full insert sequence Length = 1008 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cgcctccctctcctcctcccc 70 ||||||||||||||||||||| Sbjct: 460 cgcctccctctcctcctcccc 440
>dbj|AP003721.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-881M11, complete sequence Length = 201460 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ccttcgccatcatcaccacca 133 ||||||||||||||||||||| Sbjct: 50573 ccttcgccatcatcaccacca 50593
>dbj|AP000777.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-804A23, complete sequence Length = 197856 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ccttcgccatcatcaccacca 133 ||||||||||||||||||||| Sbjct: 171983 ccttcgccatcatcaccacca 172003
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ttccagaccatgtgatgcaag 46 ||||||||||||||||||||| Sbjct: 289941 ttccagaccatgtgatgcaag 289961
>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence Length = 198582 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 catcatcaccaccaccttctc 140 ||||||||||||||||||||| Sbjct: 86731 catcatcaccaccaccttctc 86711
>gb|AC004126.1|AC004126 Human Chromosome 11q12.2 PAC clone pDJ606g6, complete sequence Length = 136328 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ccttcgccatcatcaccacca 133 ||||||||||||||||||||| Sbjct: 30179 ccttcgccatcatcaccacca 30159
>emb|CT025606.10| Mouse DNA sequence from clone RP24-120D14 on chromosome 12, complete sequence Length = 164251 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 tccctctcctcctcccccaac 74 ||||||||||||||||||||| Sbjct: 20661 tccctctcctcctcccccaac 20681
>gb|AC103359.6| Mus musculus chromosome 8, clone RP24-365B9, complete sequence Length = 178620 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 123 catcaccaccaccttctcctctttc 147 |||||||||||||| |||||||||| Sbjct: 129600 catcaccaccacctcctcctctttc 129576
>gb|U22657.1|MMU22657 Mus musculus genomic locus related to cellular morphology Length = 18278 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttctcctctttcctcc 151 ||||||||| | || |||||||||||||||||| Sbjct: 707 ccatcatcatctcctccttctcctctttcctcc 739
>ref|NM_121215.3| Arabidopsis thaliana NADH dehydrogenase (ubiquinone) AT5G11770 mRNA, complete cds Length = 1070 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 101 gcgcctccctctcctcctcc 120
>ref|XM_630337.1| Dictyostelium discoideum RNA polymerase I core subunit (DDB0216272), partial mRNA Length = 402 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 32 ccatcatcaccaccaccttc 13
>gb|AC139675.11| Mus musculus chromosome 3, clone RP23-328D16, complete sequence Length = 204280 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 89716 cctccctctcctcctccccc 89735
>gb|AC136702.19| Mus musculus chromosome 3, clone RP23-24N12, complete sequence Length = 209773 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 171183 cctccctctcctcctccccc 171202
>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete sequence Length = 188848 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 catcatcaccaccaccttctcctc 143 ||||||||||||||||| |||||| Sbjct: 182665 catcatcaccaccacctcctcctc 182688
>gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, complete sequence Length = 175586 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 48043 cctccctctcctcctccccc 48062
>gb|AC113060.11| Mus musculus chromosome 13, clone RP23-255E18, complete sequence Length = 192264 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 90872 cctccctctcctcctccccc 90891
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 catcatcagatccatgcacc 372 |||||||||||||||||||| Sbjct: 4178189 catcatcagatccatgcacc 4178208
>ref|XM_322823.1| Neurospora crassa OR74A hypothetical protein (NCU03566.1) partial mRNA Length = 813 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 158 cctccctctcctcctccccc 177
>ref|XM_951036.1| Neurospora crassa OR74A hypothetical protein (NCU03566.1) partial mRNA Length = 813 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 158 cctccctctcctcctccccc 177
>ref|XM_952324.1| Neurospora crassa OR74A hypothetical protein (NCU07192.1) partial mRNA Length = 2517 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 2321 ccatcatcaccaccaccttc 2302
>ref|XM_327477.1| Neurospora crassa OR74A hypothetical protein (NCU07192.1) partial mRNA Length = 2517 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 2321 ccatcatcaccaccaccttc 2302
>gb|AC122408.4| Mus musculus BAC clone RP24-137E16 from chromosome 10, complete sequence Length = 131580 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 36234 cctccctctcctcctccccc 36215
>gb|AY596305.1| Chlamydomonas reinhardtii cell wall protein GP2 (GP2) mRNA, partial cds Length = 4218 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgcctccctctcctcctccc 69 |||||||||||||||||||| Sbjct: 1562 cgcctccctctcctcctccc 1581
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 ccttcgccatcatcaccaccaccttctc 140 ||||| ||||||||||||||||| |||| Sbjct: 60677 ccttcaccatcatcaccaccaccatctc 60704
>gb|AC124978.19| Mus musculus chromosome 5, clone RP24-107D19, complete sequence Length = 182405 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 132535 cctccctctcctcctccccc 132554
>gb|AC141882.3| Mus musculus BAC clone RP24-177O3 from chromosome 17, complete sequence Length = 173120 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 122285 cctccctctcctcctccccc 122304
>gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, complete sequence Length = 274853 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 220110 cctccctctcctcctccccc 220091
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence Length = 247655 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 catcatcaccaccaccttctcctc 143 ||||||||||||||||| |||||| Sbjct: 241424 catcatcaccaccacctcctcctc 241447
>gb|AC125055.3| Mus musculus BAC clone RP23-397L11 from chromosome 7, complete sequence Length = 209066 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 18692 cctccctctcctcctccccc 18711
>gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome 18, complete sequence Length = 206588 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 108741 cctccctctcctcctccccc 108722
>emb|BX601645.15| Zebrafish DNA sequence from clone CH211-207J7 in linkage group 6, complete sequence Length = 223513 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcgccatcatcaccaccacc 135 |||||||||||||||||||| Sbjct: 170192 tcgccatcatcaccaccacc 170211
>gb|AC087329.10| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-383N15, Complete Sequence, complete sequence Length = 219559 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 131899 cctccctctcctcctccccc 131918
>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete sequence Length = 181626 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 164092 cctccctctcctcctccccc 164111
>gb|AC127332.3| Mus musculus BAC clone RP23-136I1 from 5, complete sequence Length = 230629 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 195095 cctccctctcctcctccccc 195076
>gb|AC122272.4| Mus musculus BAC clone RP23-225J2 from 6, complete sequence Length = 208684 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 52505 cctccctctcctcctccccc 52486
>gb|AC146086.2| Pan troglodytes BAC clone RP43-15D2 from 7, complete sequence Length = 135353 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 99555 cctccctctcctcctccccc 99574
>gb|AC006003.4| Homo sapiens PAC clone RP4-782K24 from 7, complete sequence Length = 123255 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgcctccctctcctcctccc 69 |||||||||||||||||||| Sbjct: 79182 cgcctccctctcctcctccc 79201
>gb|AC157761.6| Mus musculus chromosome 5, clone RP23-446J15, complete sequence Length = 177868 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 ccttcgccatcatcaccaccaccttctc 140 ||||| ||||||||||||||||| |||| Sbjct: 63795 ccttcaccatcatcaccaccaccatctc 63768
>gb|AC127429.25| Medicago truncatula clone mth2-9o20, complete sequence Length = 130703 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 catcatcaccaccaccttct 139 |||||||||||||||||||| Sbjct: 96359 catcatcaccaccaccttct 96340
>emb|BX322800.3| Human DNA sequence from clone RP11-762K23 on chromosome 9, complete sequence Length = 15571 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 9423 cctccctctcctcctccccc 9404 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 9303 cctccctctcctcctccccc 9284
>emb|AL593848.14| Human DNA sequence from clone RP13-100B2 on chromosome 9 Contains the 3' end of the ADAMTS13 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 13, the C9orf7 gene for chromosome 9 open reading frame 7, the SLC2A6 gene for solute carrier family 2 (facilitated glucose transporter) member 6, a novel gene and two CpG islands, complete sequence Length = 53335 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 cctccctctcctcctcccccaact 75 ||||||| |||||||||||||||| Sbjct: 40282 cctccctttcctcctcccccaact 40259
>emb|AL499627.23| Human DNA sequence from clone RP13-379O24 on chromosome 20 Contains the GATA5 gene for GATA binding protein 5 and two CpG islands, complete sequence Length = 59999 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cttcgccatcatcaccacca 133 |||||||||||||||||||| Sbjct: 48100 cttcgccatcatcaccacca 48119
>gb|AC099305.5| Rattus norvegicus 2 BAC CH230-172K3 (Children's Hospital Oakland Research Institute) complete sequence Length = 92339 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ccaccttctcctctttcctc 150 |||||||||||||||||||| Sbjct: 61422 ccaccttctcctctttcctc 61403
>emb|AL121829.30|HSJ697K14 Human DNA sequence from clone RP4-697K14 on chromosome 20 Contains the C20orf148 gene for a novel tyrosine kinase, the PTK6 gene for protein tyrosine kinase 6, a novel gene, the EEF1A2 gene for eukaryotic translation elongation factor 1 alpha 2, the 5' end of the KCNQ2 gene for potassium voltage-gated channel (KQT-like subfamily member 2), the gene for peroxisomal proliferator-activated receptor A interacting complex 285 (PRIC285)(FLJ00244, KIAA1769), the C20orf149 gene, the gene for novel protein MGC5356 (MGC5356), the gene for a novel protein (LOC200213), a novel gene and thirteen CpG islands, complete sequence Length = 113196 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 48992 cctccctctcctcctccccc 48973
>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence Length = 180338 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 catcatcaccaccaccttctcctc 143 |||||||||||||||| ||||||| Sbjct: 60958 catcatcaccaccaccatctcctc 60935
>gb|AC095504.7| Rattus norvegicus 2 BAC CH230-7P18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227012 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cctctcctcctcccccaact 75 |||||||||||||||||||| Sbjct: 18572 cctctcctcctcccccaact 18553
>gb|AY056182.1| Arabidopsis thaliana putative NADH dehydrogenase (ubiquinone) (At5g11770) mRNA, complete cds Length = 950 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 102 gcgcctccctctcctcctcc 121
>gb|AC158775.8| Mus musculus chromosome 19, clone RP23-53N8, complete sequence Length = 177315 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 73875 cctccctctcctcctccccc 73894
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 catcatcagatccatgcacc 372 |||||||||||||||||||| Sbjct: 19144 catcatcagatccatgcacc 19163
>gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosome 9, complete sequence Length = 205771 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 177028 cctccctctcctcctccccc 177009
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 agacgcgaggtgctagagag 286 |||||||||||||||||||| Sbjct: 71739 agacgcgaggtgctagagag 71720
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 catcatcagatccatgcacc 372 |||||||||||||||||||| Sbjct: 56336 catcatcagatccatgcacc 56355
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 88915 ccatcatcaccaccaccttc 88896
>emb|BX284746.1|NCB23I4 Neurospora crassa DNA linkage group II BAC contig B23I4 Length = 71047 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 68465 cctccctctcctcctccccc 68484
>gb|AY152814.1| Posidonia oceanica microsatellite Po-15 sequence Length = 801 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 659 cctccctctcctcctccccc 678
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14 Length = 107947 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 4002 cctccctctcctcctccccc 4021
>emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0078D11, complete sequence Length = 115006 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 78082 gcgcctccctctcctcctcc 78063
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence Length = 215342 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 90454 ccatcatcaccaccaccttc 90473 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 90414 ccatcatcaccaccaccttc 90433 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 90297 ccatcatcaccaccaccttc 90316 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 90217 ccatcatcaccaccaccttc 90236 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 90177 ccatcatcaccaccaccttc 90196 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 90097 ccatcatcaccaccaccttc 90116 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 90057 ccatcatcaccaccaccttc 90076 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 90017 ccatcatcaccaccaccttc 90036 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 89977 ccatcatcaccaccaccttc 89996
>emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P22 (ESSA project) Length = 93205 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 71882 gcgcctccctctcctcctcc 71863
>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence Length = 162840 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 147959 cctccctctcctcctccccc 147940
>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0076E06, from chromosome 3, complete sequence Length = 126323 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccctctcctcctcccccaac 74 |||||||||||||||||||| Sbjct: 121753 ccctctcctcctcccccaac 121772
>gb|AY128912.1| Arabidopsis thaliana NADH dehydrogenase / ubiquinone (At5g11770) mRNA, complete cds Length = 737 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 30 gcgcctccctctcctcctcc 49
>gb|AC023728.5| Drosophila melanogaster X BAC RP98-6J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175674 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcgccatcatcaccaccacc 135 |||||||||||||||||||| Sbjct: 136869 tcgccatcatcaccaccacc 136888
>gb|AC011549.7| Homo sapiens chromosome 19 clone LLNLR-274C4, complete sequence Length = 39947 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 39420 cctccctctcctcctccccc 39439
>gb|AY099848.1| Arabidopsis thaliana NADH dehydrogenase / ubiquinone (At5g11770) mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 96 gcgcctccctctcctcctcc 115
>gb|AC091643.6| Homo sapiens chromosome 18, clone RP11-727B4, complete sequence Length = 169944 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 115682 cctccctctcctcctccccc 115701
>gb|AC160566.2| Pan troglodytes BAC clone CH251-353L1 from chromosome unknown, complete sequence Length = 188544 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 138984 ccatcatcaccaccaccttc 139003
>gb|AF428300.1|AF428300 Arabidopsis thaliana AT5g11770/T22P22_160 mRNA, complete cds Length = 1039 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 101 gcgcctccctctcctcctcc 120
>gb|AC148986.5| Mus musculus BAC clone RP23-89A16 from chromosome 7, complete sequence Length = 243039 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 caccaccaccttctcctctt 145 |||||||||||||||||||| Sbjct: 223366 caccaccaccttctcctctt 223347
>gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome 16, complete sequence Length = 200787 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tcaccaccaccttctcctct 144 |||||||||||||||||||| Sbjct: 185350 tcaccaccaccttctcctct 185369
>gb|AF368464.1|AF368464 Homo sapiens carboxypeptidase M gene, exons 1 and 2 and partial cds Length = 353 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 126 gcgcctccctctcctcctcc 107
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 25331925 gcgcctccctctcctcctcc 25331906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 caccttctcctctttcctcc 151 |||||||||||||||||||| Sbjct: 19240613 caccttctcctctttcctcc 19240594
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 7889589 cctccctctcctcctccccc 7889570
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 7689420 gcgcctccctctcctcctcc 7689439
>gb|AC113009.8| Homo sapiens chromosome 8, clone RP11-7F12, complete sequence Length = 159520 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 130277 ccatcatcaccaccaccttc 130258
>emb|BX833732.1|CNS0A1ZR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZC01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 870 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 79 gcgcctccctctcctcctcc 98
>emb|BX832695.1|CNS0A0ZX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH90ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1049 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 81 gcgcctccctctcctcctcc 100
>emb|BX831393.1|CNS0A0OP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 881 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 79 gcgcctccctctcctcctcc 98
>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence Length = 206481 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 46621 cctccctctcctcctccccc 46640
>gb|AC084795.5| Homo sapiens chromosome 16 clone CTD-2007P3, complete sequence Length = 132262 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 52935 ccatcatcaccaccaccttc 52916
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete sequence Length = 182748 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 124234 cctccctctcctcctccccc 124215
>gb|AC007909.8| Homo sapiens chromosome 16 clone RP11-515G11, complete sequence Length = 183149 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 146261 ccatcatcaccaccaccttc 146242
>gb|AC025423.32| Homo sapiens 12 BAC RP11-611O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 16422 gcgcctccctctcctcctcc 16403
>gb|AC073611.29| Homo sapiens 12 BAC RP11-680A11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ctccctctcctcctccccca 72 |||||||||||||||||||| Sbjct: 71858 ctccctctcctcctccccca 71839
>gb|AY085120.1| Arabidopsis thaliana clone 13161 mRNA, complete sequence Length = 937 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 79 gcgcctccctctcctcctcc 98
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 126984 cctccctctcctcctccccc 127003
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 25685 gcgcctccctctcctcctcc 25704
>dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09, map 22, complete sequences Length = 201997 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 139691 cctccctctcctcctccccc 139710 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 139649 cctccctctcctcctccccc 139668
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0090H20 Length = 132628 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 120876 cctccctctcctcctccccc 120857
>dbj|AP005410.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0038P10 Length = 148527 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 79480 cctccctctcctcctccccc 79461
>emb|X96679.1|ATPSST A.thaliana PSST gene Length = 1855 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 1738 gcgcctccctctcctcctcc 1757
>emb|X84078.1|ATNADHUO A.thaliana mRNA for NADH:ubiquinone oxidoreductase (complex I) Length = 951 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 72 gcgcctccctctcctcctcc 91
>dbj|AK099690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D10, full insert sequence Length = 2977 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 caccttctcctctttcctcc 151 |||||||||||||||||||| Sbjct: 462 caccttctcctctttcctcc 443
>emb|AL772186.11| Mouse DNA sequence from clone RP23-281K3 on chromosome 4, complete sequence Length = 205714 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 caccaccaccttctcctctt 145 |||||||||||||||||||| Sbjct: 140486 caccaccaccttctcctctt 140467
>gb|AC149606.6| Mus musculus BAC clone RP23-466P2 from 7, complete sequence Length = 214153 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caccaccaccttctcctctt 145 |||||||||||||||||||| Sbjct: 183284 caccaccaccttctcctctt 183303
>gb|AC155257.1| Mus musculus BAC clone RP24-109N5 from 16, complete sequence Length = 185931 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tcaccaccaccttctcctct 144 |||||||||||||||||||| Sbjct: 745 tcaccaccaccttctcctct 764
>gb|AY111769.1| Zea mays CL20080_1 mRNA sequence Length = 604 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 gagtcaagaatccatcatcagatc 364 |||||||||| ||||||||||||| Sbjct: 286 gagtcaagaagccatcatcagatc 263
>gb|AC002327.1|AC002327 Mus musculus chromosome 7, clone 19K5, complete sequence Length = 159515 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caccaccaccttctcctctt 145 |||||||||||||||||||| Sbjct: 110913 caccaccaccttctcctctt 110932
>gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 of 74 of the complete sequence Length = 342195 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcgccatcatcaccaccacc 135 |||||||||||||||||||| Sbjct: 2237 tcgccatcatcaccaccacc 2256
>dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-651K21, complete sequence Length = 197360 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccatcatcaccaccaccttc 138 |||||||||||||||||||| Sbjct: 146827 ccatcatcaccaccaccttc 146846
>dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, section 87/105 Length = 219256 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 140208 cctccctctcctcctccccc 140227
>emb|CT030655.7| Mouse DNA sequence from clone RP23-259C9 on chromosome 13, complete sequence Length = 120944 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 105771 cctccctctcctcctccccc 105752
>gb|AC100967.15| Mus musculus chromosome 5, clone RP23-74L20, complete sequence Length = 229660 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 147099 cctccctctcctcctccccc 147080
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 ccttcgccatcatcaccaccaccttctc 140 ||||| ||||||||||||||||| |||| Sbjct: 249552 ccttcaccatcatcaccaccaccatctc 249525
>gb|AC164412.9| Mus musculus chromosome 3, clone RP24-360M7, complete sequence Length = 172583 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 161809 cctccctctcctcctccccc 161828
>gb|DQ196111.1| Chlamydomonas reinhardtii pherophorin-C5 protein precursor, mRNA, complete cds Length = 1626 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 640 cctccctctcctcctccccc 659
>gb|DQ196108.1| Chlamydomonas reinhardtii pherophorin-C2 protein precursor, mRNA, complete cds Length = 2562 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 895 cctccctctcctcctccccc 914 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 739 cctccctctcctcctccccc 758 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 610 cctccctctcctcctccccc 629
>gb|DQ196107.1| Chlamydomonas reinhardtii pherophorin-C1 protein precursor, mRNA, complete cds Length = 2217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 694 cctccctctcctcctccccc 713 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 634 cctccctctcctcctccccc 653
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 25260101 gcgcctccctctcctcctcc 25260082 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 caccttctcctctttcctcc 151 |||||||||||||||||||| Sbjct: 19166840 caccttctcctctttcctcc 19166821
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136155 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 caccttctcctctttcctcc 151 |||||||||||||||||||| Sbjct: 73943 caccttctcctctttcctcc 73924
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcgcctccctctcctcctcc 68 |||||||||||||||||||| Sbjct: 5265 gcgcctccctctcctcctcc 5284
>emb|CT030739.10| Mouse DNA sequence from clone RP24-496K8 on chromosome 13, complete sequence Length = 192075 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 141632 cctccctctcctcctccccc 141651
>gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosome 19, complete sequence Length = 148454 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 catcatcaccaccaccttctcctc 143 ||||||||||||||||| |||||| Sbjct: 120405 catcatcaccaccacctcctcctc 120428
>gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, complete sequence Length = 201846 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 174780 cctccctctcctcctccccc 174799
>emb|AL805976.12| Mouse DNA sequence from clone RP23-34H1 on chromosome 4, complete sequence Length = 192098 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 123247 cctccctctcctcctccccc 123266
>gb|AC001644.1|AC001644 Genomic sequence from Human 9q34, complete sequence Length = 42415 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cctccctctcctcctcccccaact 75 ||||||| |||||||||||||||| Sbjct: 6564 cctccctttcctcctcccccaact 6587
>emb|AL672219.7| Mouse DNA sequence from clone RP23-456B9 on chromosome 9, complete sequence Length = 206125 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 91863 cctccctctcctcctccccc 91882
>emb|AL844519.9| Mouse DNA sequence from clone RP23-250M11 on chromosome 2, complete sequence Length = 183051 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caccaccaccttctcctctt 145 |||||||||||||||||||| Sbjct: 26934 caccaccaccttctcctctt 26953
>dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:KB657H6, MX1-D21S171 region, complete sequence Length = 124516 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cctccctctcctcctccccc 71 |||||||||||||||||||| Sbjct: 80280 cctccctctcctcctccccc 80299 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,834,868 Number of Sequences: 3902068 Number of extensions: 3834868 Number of successful extensions: 104986 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104017 Number of HSP's gapped (non-prelim): 969 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
