>ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing protein 3|
          Length = 948

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
 Frame = -3

Query: 426 SCEETKYSRPPLTAGRSWNRLPSTTGSGTARSDSGRHRNRPAEPVRXXXXXXXXXXXXXX 247
           SC         + AG +   +PS +  G AR  SG  + R A  V               
Sbjct: 254 SCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVTCRTNKFRKNNYKW 313

Query: 246 XALKLTETPSVWRRSASP--AADTLSGVCGTATEKTSKPKLVTPTEAKTTVP-VGSRPGS 76
            A   +++P V RR+ SP  AA+ +         K  KP+L+   E K   P   S+PGS
Sbjct: 314 VAAS-SKSPRVARRALSPRVAAENVCKASAGMANKVEKPQLIADPEPKPRKPATSSKPGS 372

>CARB_HALSA (Q9HP43) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1042

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 23/84 (27%), Positives = 34/84 (40%)
 Frame = +2

Query: 47  CQPHAITPIMEPGREPTGTVVFASVGVTSFGFDVFSVAVPQTPESVSAAGLAERRHTDGV 226
           C  HA+  + E G +    VV  +    S  +D       +   +   A + E  + DGV
Sbjct: 585 CTVHAVRALREAGID--AHVVNNNPETVSTDYDTSDGLFFEPITAEEVADVVEATNADGV 642

Query: 227 SVNFNAQFADDVGEEVAFVSERTG 298
            V F  Q + DVG  +    ER G
Sbjct: 643 MVQFGGQTSVDVGAPLEAELERRG 666

>MACF4_HUMAN (Q96PK2) Microtubule-actin crosslinking factor 1, isoform 4|
          Length = 5938

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 1/110 (0%)
 Frame = -3

Query: 405  SRPPLTAGRSWNRLPSTTGSGTARSDSGRHRNRPAEPV-RXXXXXXXXXXXXXXXALKLT 229
            SR  L    S +  P++TG+ T R+D  +  +RP                        L 
Sbjct: 5829 SRTSLAGDTSNSSSPASTGAKTNRADPKKSASRPGSRAGSRAGSRASSRRGSDASDFDLL 5888

Query: 228  ETPSVWRRSASPAADTLSGVCGTATEKTSKPKLVTPTEAKTTVPVGSRPG 79
            ET S    ++  +A   +G  G +    +KP  +     KTT      PG
Sbjct: 5889 ETQSACSDTSESSA---AGGQGNSRRGLNKPSKIPTMSKKTTTASPRTPG 5935

>MACF1_HUMAN (Q9UPN3) Microtubule-actin crosslinking factor 1, isoforms 1/2/3/5|
            (Actin cross-linking family protein 7) (Macrophin-1)
            (Trabeculin-alpha) (620 kDa actin-binding protein)
            (ABP620)
          Length = 5430

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 1/110 (0%)
 Frame = -3

Query: 405  SRPPLTAGRSWNRLPSTTGSGTARSDSGRHRNRPAEPV-RXXXXXXXXXXXXXXXALKLT 229
            SR  L    S +  P++TG+ T R+D  +  +RP                        L 
Sbjct: 5321 SRTSLAGDTSNSSSPASTGAKTNRADPKKSASRPGSRAGSRAGSRASSRRGSDASDFDLL 5380

Query: 228  ETPSVWRRSASPAADTLSGVCGTATEKTSKPKLVTPTEAKTTVPVGSRPG 79
            ET S    ++  +A   +G  G +    +KP  +     KTT      PG
Sbjct: 5381 ETQSACSDTSESSA---AGGQGNSRRGLNKPSKIPTMSKKTTTASPRTPG 5427

>SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate|
           adenylate transferase) (SAT) (ATP-sulfurylase)
          Length = 437

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 123 PTEAKTTVPVGSRPGSMIGVMACGWQSRALCK 28
           P    TTVP   RP SM       W+SR+ C+
Sbjct: 297 PAWVTTTVPSTPRPSSMTKCQRAPWRSRSSCR 328

>TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (Flocculation|
           suppressor protein) (Repressor AER2)
          Length = 713

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 228 ETPSVWRRSASPAADTLSGVCGTATEKTSKPKLVTPTEAKTTVPVGS 88
           + P+    +A+PAA+T +G       + S+P LV      TT+PV S
Sbjct: 131 QPPATTSATATPAANTTTGSPSAFPVQASRPNLVGSQLPTTTLPVVS 177

>CH60_BARBA (P35635) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
           (Immunoreactive protein Bb65) (Immunoreactive protein
           Bb63) (Heat shock protein 60) (HSP 60)
          Length = 543

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +2

Query: 239 NAQFADDVGEEVAFVSERTGSAGLFLCRPESERAVPLPVVEGSLFHDRPAVRGGRLYFVS 418
           +A  A+D+G+ +A   E+ G+ G+            L VVEG  F DR  +     YFV+
Sbjct: 150 SANGAEDIGKMIADAMEKVGNEGVITVEEAKTAETELEVVEGMQF-DRGYLSP---YFVT 205

Query: 419 SHE 427
           + E
Sbjct: 206 NSE 208

>UREE_DEIRA (Q9RYJ8) Urease accessory protein ureE|
          Length = 155

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
 Frame = +2

Query: 92  PTGTVVF-ASVGVTSFGFDVFSVAVPQTPESVSAAGLAERRHTDGVSVNFNAQFADDVGE 268
           PTGTV+   +V  T  G      A P+    V    LAE  HT     N +  F +D G 
Sbjct: 59  PTGTVLSPGTVLGTRGGVSYVVSAAPEDVAVVVPRTLAEAAHTAHAVGNLHRDFVEDAG- 117

Query: 269 EVAFVSERTGSAGLFLCRPESERAVPLPVVEGSLFHDRPA 388
             AF++       L L R      VP    E   FH RP+
Sbjct: 118 --AFLTPWDAPIELLLTR----LGVPF-TRETRPFHGRPS 150

>Y1356_AGRT5 (Q8UFP1) UPF0283 membrane protein Atu1356/AGR_C_2505|
          Length = 359

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = +2

Query: 194 GLAERRHTDGVSVNFNAQFADDVGEEVAFVSERTGSAGLFLCRPESERAVPLPVVEGSLF 373
           GLA++    G++   +A+  + V      ++ R G A + LCRP   RAV  P +   + 
Sbjct: 287 GLAQQVLGHGLASKLSARLGEGVIN--GLMTARIGIAAMDLCRPLPFRAVKRPGIGDFMS 344

Query: 374 HDRPAVRGGR 403
              P + GG+
Sbjct: 345 DLTPDLSGGK 354

>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1745

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 21/62 (33%), Positives = 28/62 (45%)
 Frame = -3

Query: 207 RSASPAADTLSGVCGTATEKTSKPKLVTPTEAKTTVPVGSRPGSMIGVMACGWQSRALCK 28
           RS SP +D  S     A+ + +KP  VT  +++     G RP S I V      S A   
Sbjct: 165 RSLSPRSDRRS----VASSQPAKPTKVTLVKSRKNEEYGLRPASHIFVKEISQDSLAARD 220

Query: 27  GD 22
           GD
Sbjct: 221 GD 222

>MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 5) (ERK-5) (ERK4)
           (BMK1 kinase)
          Length = 815

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = -3

Query: 213 WRRSASPAADTLSGVCGTATEKTSKPKLVTPTE---AKTTVPVGSRPGS 76
           W R A PAA  L+ V   A   T  P  V PT         P G +P S
Sbjct: 571 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPLAQPTGPQPQS 619

>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3|
           precursor
          Length = 556

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 20/99 (20%), Positives = 41/99 (41%)
 Frame = -3

Query: 390 TAGRSWNRLPSTTGSGTARSDSGRHRNRPAEPVRXXXXXXXXXXXXXXXALKLTETPSVW 211
           T+  + +   STT S T+ + S    +  +                    L  +E  +V 
Sbjct: 220 TSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSIFSVTSSSSSITLSSSEHTTVD 279

Query: 210 RRSASPAADTLSGVCGTATEKTSKPKLVTPTEAKTTVPV 94
            R++SP++  +     ++T  T K   +TP+   +T+P+
Sbjct: 280 SRTSSPSSTLVPVSSSSSTLSTPKVTSMTPS-TSSTIPI 317

>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing|
           protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1
           ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral
           sclerosis 2 chromosomal region candidate 9 gene protein)
          Length = 1302

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 24/106 (22%), Positives = 40/106 (37%)
 Frame = -3

Query: 414 TKYSRPPLTAGRSWNRLPSTTGSGTARSDSGRHRNRPAEPVRXXXXXXXXXXXXXXXALK 235
           T  S   + +G S + +P +  + + +SDSG    +PA  VR                 +
Sbjct: 579 TSLSSSSIKSGSSSSSIPESQSNHSNQSDSGVSDTQPAGHVRSQSIVSSVFSEAWKRGTQ 638

Query: 234 LTETPSVWRRSASPAADTLSGVCGTATEKTSKPKLVTPTEAKTTVP 97
           L E+      S +    +L          + +PK+VTP  A    P
Sbjct: 639 LEESSKARMESMNRPYTSL------VPPLSPQPKIVTPYTASQPSP 678

>GGT5_HUMAN (P36269) Gamma-glutamyltransferase 5 precursor (EC 2.3.2.2)|
           (Gamma-glutamyltranspeptidase 5)
           (Gamma-glutamyltransferase-like activity 1) (GGT-rel)
           [Contains: Gamma-glutamyltransferase 5 heavy chain;
           Gamma-glutamyltransferase 5 light chain]
          Length = 586

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 12/147 (8%)
 Frame = +2

Query: 11  YKRQSPLHKARLCQP--------HAITPIMEPGREPTGTVVFASVGVTSFGFDVFSVAVP 166
           ++R   L  A+L QP        H + P++   R    +++  S+  ++     F+   P
Sbjct: 151 HRRHGRLPWAQLFQPTIALLRGGHVVAPVLS--RFLHNSILRPSLQASTLRQLFFNGTEP 208

Query: 167 QTPESV----SAAGLAERRHTDGVSVNFNAQFADDVGEEVAFVSERTGSAGLFLCRPESE 334
             P+      + A   E   T+GV V +  +    + E++A    +     L   +PE  
Sbjct: 209 LRPQDPLPWPALATTLETVATEGVEVFYTGRLGQMLVEDIAKEGSQLTLQDLAKFQPEVV 268

Query: 335 RAVPLPVVEGSLFHDRPAVRGGRLYFV 415
            A+ +P+ + +L+   P   G  L F+
Sbjct: 269 DALEVPLGDYTLYSPPPPAGGAILSFI 295

>COBK_PSEDE (P21920) Precorrin-6A reductase (EC 1.3.1.54) (Precorrin-6X|
           reductase)
          Length = 260

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 188 AAGLAERRHTDGVSVNFNAQ--FADDVGEEVAFVSERTGSAGLFLCRPESERAVPLP 352
           A GLA   H + +++  +A   FA  +    A  ++RTG A + L RPE    VPLP
Sbjct: 65  ADGLAHFVHDENIALLVDATHPFAARISHNAADAAQRTGVALIALRRPE---WVPLP 118

>YAEF_ECOLI (P37056) Hypothetical lipoprotein yaeF precursor|
          Length = 274

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 59  AITPIMEPGREPTGTVVFASVGVTSFGFDVFSVA 160
           +I  I  P  +P   +  +S+GVTSFG  VFS +
Sbjct: 56  SIKEITAPDLKPGDLLFSSSLGVTSFGIRVFSTS 89

>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking|
            family 7)
          Length = 5327

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 1/110 (0%)
 Frame = -3

Query: 405  SRPPLTAGRSWNRLPSTTGSGTARSDSGRHRNRPAEPV-RXXXXXXXXXXXXXXXALKLT 229
            SR  L    S +  P++TG+   R+D  +  +RP                        L 
Sbjct: 5218 SRTSLAGDTSNSSSPASTGAKANRADPKKSASRPGSRAGSRAGSRASSRRGSDASDFDLL 5277

Query: 228  ETPSVWRRSASPAADTLSGVCGTATEKTSKPKLVTPTEAKTTVPVGSRPG 79
            ET S    ++  +A   +G  G++    +KP  +     KTT      PG
Sbjct: 5278 ETQSACSDTSESSA---AGGQGSSRRGLTKPSKIPTMSKKTTTASPRTPG 5324

>T2MW_METWO (O59646) Type II restriction enzyme MwoI (EC 3.1.21.4)|
           (Endonuclease MwoI) (R.MwoI)
          Length = 363

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 132 LVTPTEAKTTVPVGSRPGSMIGVMACGWQSRALCKGDCR 16
           L  P++ K TVP+G    S  GV+ C  + + + K DC+
Sbjct: 116 LENPSDFKDTVPLGINQSSYPGVLDCKIRGKNI-KADCK 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,157,288
Number of Sequences: 219361
Number of extensions: 650099
Number of successful extensions: 2756
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2755
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)