ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet96g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479269.1| Oryza sativa (japonica cultivar-group), mRNA 139 8e-30
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
3dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
4dbj|AK100429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 8e-30
5gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genom... 48 0.024
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.024
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
8dbj|AK100408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
9dbj|AK067797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
10ref|XM_483620.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.37
11ref|XM_507318.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.37
12ref|XM_483619.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.37
13gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 44 0.37
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
15dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
16dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
17dbj|AK108562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
18dbj|AK101517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
19dbj|AK063995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
20gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.5
21gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
22gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
23gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene clust... 42 1.5
24dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27gb|AE005102.1| Halobacterium sp. NRC-1 section 133 of 170 of the... 42 1.5
28ref|NM_196957.1| Oryza sativa (japonica cultivar-group) putative... 40 5.7
29ref|NM_187761.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
30gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genom... 40 5.7
31ref|XM_594012.2| PREDICTED: Bos taurus purinergic receptor P2X, ... 40 5.7
32gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosom... 40 5.7
33gb|AY211934.1| Trimeresurus stejnegeri phospholipase A2 isozyme ... 40 5.7
34gb|AY498614.1| Paracoccus pantotrophus strain DSM65 putative ABC... 40 5.7
35gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, comp... 40 5.7
36ref|XM_743195.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.7
37ref|XM_533608.2| PREDICTED: Canis familiaris similar to myosin b... 40 5.7
38ref|XM_858270.1| PREDICTED: Canis familiaris similar to myosin b... 40 5.7
39emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 i... 40 5.7
40gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
41emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.7
42emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 5.7
43dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.7
44emb|BX666062.6| Zebrafish DNA sequence from clone DKEY-99O18 in ... 40 5.7
45dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
46gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079... 40 5.7
47gb|AF288222.3| Xanthomonas oryzae pv. oryzae phosphoribosylformy... 40 5.7
48dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.7
49dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.7
50emb|BX000706.10| Zebrafish DNA sequence from clone CH211-204D18 ... 40 5.7
51dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.7
52dbj|AB091764.1| Pseudomonas putida sfnECR operon genes for NADH-... 40 5.7
53dbj|AK120962.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
54dbj|AK109464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
55emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.7
56dbj|AK064886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
57gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 5.7
58gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 5.7
59gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
60dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.7 
>ref|XM_479269.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2199

 Score =  139 bits (70), Expect = 8e-30
 Identities = 189/228 (82%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                       
Query: 203 gagcgccgccacaccgacggcgtctccgtcaacttcaacgcccagttcgcggacgacgtc 262
           |||||||||||||| |||||||| ||||| ||||||||||| |||||||  ||||| | |
Sbjct: 150 gagcgccgccacacggacggcgtatccgtgaacttcaacgcgcagttcgtcgacgatggc 209

                                                                       
Query: 263 ggcgaggaggtggcgttcgtgtccgagcggaccggctcggcgggcctgttcctatgccgc 322
           || |||||||||||||||||||| |||||   |||| ||||||| |||||||  ||||| 
Sbjct: 210 ggggaggaggtggcgttcgtgtcggagcgaggcggcgcggcggggctgttccggtgccgg 269

                                                                       
Query: 323 cccgagtccg---agcgcgccgtgccgctgccggtcgttgaggggagcctgttccacgac 379
           || | | |||   |||| |||| ||||||||||   || ||||||||||||||||| |||
Sbjct: 270 ccggggcccgagcagcgggccgagccgctgccgacggtggaggggagcctgttccatgac 329

                                                           
Query: 380 cgccccgccgtgaggggcgggcggctgtatttcgtctcctcgcacgag 427
           |||||  | |||||||||||| || |||| ||||||||| | ||||||
Sbjct: 330 cgcccgacggtgaggggcgggaggttgtacttcgtctccgcccacgag 377



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                       
Query: 89  gagcccaccggcacggtcgtcttcgcctccgtcggggtcaccagcttcggcttcgacgtc 148
           ||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 48  gagcccaccggcacgatcgtcttcgccaccgtcggcgtcaccaacttcggcttcgacgtc 107

                         
Query: 149 ttctccgtcgccgt 162
           ||||||| ||||||
Sbjct: 108 ttctccgccgccgt 121
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  139 bits (70), Expect = 8e-30
 Identities = 189/228 (82%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                            
Query: 203      gagcgccgccacaccgacggcgtctccgtcaacttcaacgcccagttcgcggacgacgtc 262
                |||||||||||||| |||||||| ||||| ||||||||||| |||||||  ||||| | |
Sbjct: 26489551 gagcgccgccacacggacggcgtatccgtgaacttcaacgcgcagttcgtcgacgatggc 26489610

                                                                            
Query: 263      ggcgaggaggtggcgttcgtgtccgagcggaccggctcggcgggcctgttcctatgccgc 322
                || |||||||||||||||||||| |||||   |||| ||||||| |||||||  ||||| 
Sbjct: 26489611 ggggaggaggtggcgttcgtgtcggagcgaggcggcgcggcggggctgttccggtgccgg 26489670

                                                                            
Query: 323      cccgagtccg---agcgcgccgtgccgctgccggtcgttgaggggagcctgttccacgac 379
                || | | |||   |||| |||| ||||||||||   || ||||||||||||||||| |||
Sbjct: 26489671 ccggggcccgagcagcgggccgagccgctgccgacggtggaggggagcctgttccatgac 26489730

                                                                
Query: 380      cgccccgccgtgaggggcgggcggctgtatttcgtctcctcgcacgag 427
                |||||  | |||||||||||| || |||| ||||||||| | ||||||
Sbjct: 26489731 cgcccgacggtgaggggcgggaggttgtacttcgtctccgcccacgag 26489778



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                            
Query: 89       gagcccaccggcacggtcgtcttcgcctccgtcggggtcaccagcttcggcttcgacgtc 148
                ||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 26489449 gagcccaccggcacgatcgtcttcgccaccgtcggcgtcaccaacttcggcttcgacgtc 26489508

                              
Query: 149      ttctccgtcgccgt 162
                ||||||| ||||||
Sbjct: 26489509 ttctccgccgccgt 26489522
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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1340_C08
          Length = 192167

 Score =  139 bits (70), Expect = 8e-30
 Identities = 189/228 (82%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                         
Query: 203   gagcgccgccacaccgacggcgtctccgtcaacttcaacgcccagttcgcggacgacgtc 262
             |||||||||||||| |||||||| ||||| ||||||||||| |||||||  ||||| | |
Sbjct: 34822 gagcgccgccacacggacggcgtatccgtgaacttcaacgcgcagttcgtcgacgatggc 34881

                                                                         
Query: 263   ggcgaggaggtggcgttcgtgtccgagcggaccggctcggcgggcctgttcctatgccgc 322
             || |||||||||||||||||||| |||||   |||| ||||||| |||||||  ||||| 
Sbjct: 34882 ggggaggaggtggcgttcgtgtcggagcgaggcggcgcggcggggctgttccggtgccgg 34941

                                                                         
Query: 323   cccgagtccg---agcgcgccgtgccgctgccggtcgttgaggggagcctgttccacgac 379
             || | | |||   |||| |||| ||||||||||   || ||||||||||||||||| |||
Sbjct: 34942 ccggggcccgagcagcgggccgagccgctgccgacggtggaggggagcctgttccatgac 35001

                                                             
Query: 380   cgccccgccgtgaggggcgggcggctgtatttcgtctcctcgcacgag 427
             |||||  | |||||||||||| || |||| ||||||||| | ||||||
Sbjct: 35002 cgcccgacggtgaggggcgggaggttgtacttcgtctccgcccacgag 35049



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                         
Query: 89    gagcccaccggcacggtcgtcttcgcctccgtcggggtcaccagcttcggcttcgacgtc 148
             ||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 34720 gagcccaccggcacgatcgtcttcgccaccgtcggcgtcaccaacttcggcttcgacgtc 34779

                           
Query: 149   ttctccgtcgccgt 162
             ||||||| ||||||
Sbjct: 34780 ttctccgccgccgt 34793
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>dbj|AK100429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088F04, full
           insert sequence
          Length = 2200

 Score =  139 bits (70), Expect = 8e-30
 Identities = 189/228 (82%), Gaps = 3/228 (1%)
 Strand = Plus / Plus

                                                                       
Query: 203 gagcgccgccacaccgacggcgtctccgtcaacttcaacgcccagttcgcggacgacgtc 262
           |||||||||||||| |||||||| ||||| ||||||||||| |||||||  ||||| | |
Sbjct: 150 gagcgccgccacacggacggcgtatccgtgaacttcaacgcgcagttcgtcgacgatggc 209

                                                                       
Query: 263 ggcgaggaggtggcgttcgtgtccgagcggaccggctcggcgggcctgttcctatgccgc 322
           || |||||||||||||||||||| |||||   |||| ||||||| |||||||  ||||| 
Sbjct: 210 ggggaggaggtggcgttcgtgtcggagcgaggcggcgcggcggggctgttccggtgccgg 269

                                                                       
Query: 323 cccgagtccg---agcgcgccgtgccgctgccggtcgttgaggggagcctgttccacgac 379
           || | | |||   |||| |||| ||||||||||   || ||||||||||||||||| |||
Sbjct: 270 ccggggcccgagcagcgggccgagccgctgccgacggtggaggggagcctgttccatgac 329

                                                           
Query: 380 cgccccgccgtgaggggcgggcggctgtatttcgtctcctcgcacgag 427
           |||||  | |||||||||||| || |||| ||||||||| | ||||||
Sbjct: 330 cgcccgacggtgaggggcgggaggttgtacttcgtctccgcccacgag 377



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                       
Query: 89  gagcccaccggcacggtcgtcttcgcctccgtcggggtcaccagcttcggcttcgacgtc 148
           ||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 48  gagcccaccggcacgatcgtcttcgccaccgtcggcgtcaccaacttcggcttcgacgtc 107

                         
Query: 149 ttctccgtcgccgt 162
           ||||||| ||||||
Sbjct: 108 ttctccgccgccgt 121
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>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete
             sequence
          Length = 130272

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 203   gagcgccgccacaccgacggcgtctccgtcaacttcaacg 242
             |||| ||||| |||||| |||||||||||||||| |||||
Sbjct: 29345 gagctccgcctcaccgatggcgtctccgtcaactacaacg 29384
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 203      gagcgccgccacaccgacggcgtctccgtcaacttcaacg 242
                |||| ||||| |||||| |||||||||||||||| |||||
Sbjct: 35028444 gagctccgcctcaccgatggcgtctccgtcaactacaacg 35028483



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      cgacgtcttctccgtcgccg 161
                ||||||||||||||||||||
Sbjct: 27150265 cgacgtcttctccgtcgccg 27150246



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 257     gacgtcggcgaggaggtggcgttc 280
               ||||||||||||||||| ||||||
Sbjct: 3362572 gacgtcggcgaggaggttgcgttc 3362549
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 203      gagcgccgccacaccgacggcgtctccgtcaacttcaacg 242
                |||| ||||| |||||| |||||||||||||||| |||||
Sbjct: 35118516 gagctccgcctcaccgatggcgtctccgtcaactacaacg 35118555



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      cgacgtcttctccgtcgccg 161
                ||||||||||||||||||||
Sbjct: 27241588 cgacgtcttctccgtcgccg 27241569



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 257     gacgtcggcgaggaggtggcgttc 280
               ||||||||||||||||| ||||||
Sbjct: 3362683 gacgtcggcgaggaggttgcgttc 3362660
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>dbj|AK100408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087F22, full
           insert sequence
          Length = 2287

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 203 gagcgccgccacaccgacggcgtctccgtcaacttcaacg 242
           |||| ||||| |||||| |||||||||||||||| |||||
Sbjct: 211 gagctccgcctcaccgatggcgtctccgtcaactacaacg 250
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>dbj|AK067797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D11, full
           insert sequence
          Length = 2307

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 203 gagcgccgccacaccgacggcgtctccgtcaacttcaacg 242
           |||| ||||| |||||| |||||||||||||||| |||||
Sbjct: 238 gagctccgcctcaccgatggcgtctccgtcaactacaacg 277
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>ref|XM_483620.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1131

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 250 cgcggacgacgtcggcgaggaggtgg 275
           |||||| |||||||||||||||||||
Sbjct: 483 cgcggaggacgtcggcgaggaggtgg 458
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>ref|XM_507318.1| PREDICTED Oryza sativa (japonica cultivar-group), P0623F08.37 mRNA
          Length = 1556

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 cgcggacgacgtcggcgaggaggtgg 275
           |||||| |||||||||||||||||||
Sbjct: 787 cgcggaggacgtcggcgaggaggtgg 812
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>ref|XM_483619.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 cgcggacgacgtcggcgaggaggtgg 275
           |||||| |||||||||||||||||||
Sbjct: 819 cgcggaggacgtcggcgaggaggtgg 844
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 331    cgagcgcgccgtgccgctgccg 352
              ||||||||||||||||||||||
Sbjct: 265534 cgagcgcgccgtgccgctgccg 265513
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 250      cgcggacgacgtcggcgaggaggtgg 275
                |||||| |||||||||||||||||||
Sbjct: 27310452 cgcggaggacgtcggcgaggaggtgg 27310477
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0623F08
          Length = 154540

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 250    cgcggacgacgtcggcgaggaggtgg 275
              |||||| |||||||||||||||||||
Sbjct: 133655 cgcggaggacgtcggcgaggaggtgg 133680
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 250   cgcggacgacgtcggcgaggaggtgg 275
             |||||| |||||||||||||||||||
Sbjct: 11979 cgcggaggacgtcggcgaggaggtgg 12004
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>dbj|AK108562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B12, full
           insert sequence
          Length = 1131

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 250 cgcggacgacgtcggcgaggaggtgg 275
           |||||| |||||||||||||||||||
Sbjct: 483 cgcggaggacgtcggcgaggaggtgg 458
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>dbj|AK101517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H09, full
           insert sequence
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 cgcggacgacgtcggcgaggaggtgg 275
           |||||| |||||||||||||||||||
Sbjct: 819 cgcggaggacgtcggcgaggaggtgg 844
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>dbj|AK063995.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E11, full
           insert sequence
          Length = 1556

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 cgcggacgacgtcggcgaggaggtgg 275
           |||||| |||||||||||||||||||
Sbjct: 787 cgcggaggacgtcggcgaggaggtgg 812
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 81      ccggccgcgagcccaccggca 101
               |||||||||||||||||||||
Sbjct: 2022424 ccggccgcgagcccaccggca 2022444
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>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
            complete sequence
          Length = 147704

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 133  cttcggcttcgacgtcttctc 153
            |||||||||||||||||||||
Sbjct: 7314 cttcggcttcgacgtcttctc 7294
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>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08,
             complete sequence
          Length = 95638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   cttcggcttcgacgtcttctc 153
             |||||||||||||||||||||
Sbjct: 59979 cttcggcttcgacgtcttctc 59959
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>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence
          Length = 66280

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    ccggccgcgagcccaccggca 101
             |||||||||||||||||||||
Sbjct: 23830 ccggccgcgagcccaccggca 23810
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 133      cttcggcttcgacgtcttctc 153
                |||||||||||||||||||||
Sbjct: 26362623 cttcggcttcgacgtcttctc 26362603
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 250      cgcggacgacgtcggcgaggaggtg 274
                ||||| |||||||||||||||||||
Sbjct: 28869191 cgcggccgacgtcggcgaggaggtg 28869215
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>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 250   cgcggacgacgtcggcgaggaggtg 274
             ||||| |||||||||||||||||||
Sbjct: 87234 cgcggccgacgtcggcgaggaggtg 87258
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>gb|AE005102.1| Halobacterium sp. NRC-1 section 133 of 170 of the complete genome
          Length = 11510

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 325  cgagtccgagcgcgccgtgcc 345
            |||||||||||||||||||||
Sbjct: 9759 cgagtccgagcgcgccgtgcc 9779
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>ref|NM_196957.1| Oryza sativa (japonica cultivar-group) putative RNA-binding protein
           (OSJNBa0079L16.15), mRNA
          Length = 1395

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 gcttcggcttcgacgtcttctccg 155
           |||||||||||| |||||||||||
Sbjct: 143 gcttcggcttcgtcgtcttctccg 166
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>ref|NM_187761.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 924

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 gacgtcggcgaggaggtggcgttc 280
           ||||||||||||||||| ||||||
Sbjct: 399 gacgtcggcgaggaggttgcgttc 376
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>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete
             sequence
          Length = 121849

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   cgacgtcttctccgtcgccg 161
             ||||||||||||||||||||
Sbjct: 28626 cgacgtcttctccgtcgccg 28645
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>ref|XM_594012.2| PREDICTED: Bos taurus purinergic receptor P2X, ligand-gated ion
            channel, 5 (P2RX5), mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 187  cgcagcggggctggcggagc 206
            ||||||||||||||||||||
Sbjct: 1323 cgcagcggggctggcggagc 1342
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>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence
          Length = 151221

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   cgccgtcccgcagactcccg 176
             ||||||||||||||||||||
Sbjct: 45248 cgccgtcccgcagactcccg 45267
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>gb|AY211934.1| Trimeresurus stejnegeri phospholipase A2 isozyme CTs-K49a mRNA,
           complete cds
          Length = 446

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 352 ggtcgttgaggggagcctgttcca 375
           ||||||||||||||||||| ||||
Sbjct: 52  ggtcgttgaggggagcctggtcca 75
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>gb|AY498614.1| Paracoccus pantotrophus strain DSM65 putative ABC transporter
            periplasmic binding protein (tauA) gene, partial cds;
            putative ABC transporter ATP binding protein (tauB),
            putative ABC transporter permease component (tauC),
            putative taurine dehydrogenase small subunit (tauX),
            putative taurine dehydrogenase large subunit (tauY),
            sulfoacetaldehyde acetyltransferase (xsc), and
            hypothetical membrane protein (tauZ) genes, complete cds;
            and phosphate acetyltransferase (pta) gene, partial cds
          Length = 8004

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 241  cgcccagttcgcggacgacg 260
            ||||||||||||||||||||
Sbjct: 3846 cgcccagttcgcggacgacg 3827
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>gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, complete sequence
          Length = 202151

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    cgccgtcccgcagactcccg 176
              ||||||||||||||||||||
Sbjct: 187041 cgccgtcccgcagactcccg 187060
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>ref|XM_743195.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g00510)
           partial mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gacgtcggcgaggaggtggc 276
           ||||||||||||||||||||
Sbjct: 39  gacgtcggcgaggaggtggc 20
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>ref|XM_533608.2| PREDICTED: Canis familiaris similar to myosin binding protein C,
            fast-type, transcript variant 1 (LOC476404), mRNA
          Length = 3607

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  ccccgagtccgagcgcgccg 341
            ||||||||||||||||||||
Sbjct: 2796 ccccgagtccgagcgcgccg 2777
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>ref|XM_858270.1| PREDICTED: Canis familiaris similar to myosin binding protein C,
            fast-type, transcript variant 2 (LOC476404), mRNA
          Length = 3577

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  ccccgagtccgagcgcgccg 341
            ||||||||||||||||||||
Sbjct: 2766 ccccgagtccgagcgcgccg 2747
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>emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 in linkage group 24,
              complete sequence
          Length = 175626

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    ggcggagcgccgccacaccg 218
              ||||||||||||||||||||
Sbjct: 139605 ggcggagcgccgccacaccg 139586
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>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12,
             complete sequence
          Length = 177327

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 257   gacgtcggcgaggaggtggcgttc 280
             ||||||||||||||||| ||||||
Sbjct: 66642 gacgtcggcgaggaggttgcgttc 66665
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>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    gcccggccgcgagcccaccggcac 102
             |||||||||||| |||||||||||
Sbjct: 86912 gcccggccgcgaccccaccggcac 86935
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 330    ccgagcgcgccgtgccgctgccgg 353
              |||||||||||| |||||||||||
Sbjct: 136439 ccgagcgcgccgcgccgctgccgg 136416
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    gcgccgccacaccgacggcg 224
              ||||||||||||||||||||
Sbjct: 832645 gcgccgccacaccgacggcg 832626
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>emb|BX666062.6| Zebrafish DNA sequence from clone DKEY-99O18 in linkage group 2, complete
              sequence
          Length = 233488

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    ggcggagcgccgccacaccg 218
              ||||||||||||||||||||
Sbjct: 175280 ggcggagcgccgccacaccg 175299
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 132      gcttcggcttcgacgtcttctccg 155
                |||||||||||| |||||||||||
Sbjct: 16916571 gcttcggcttcgtcgtcttctccg 16916594
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>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete
              sequence
          Length = 147452

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 132    gcttcggcttcgacgtcttctccg 155
              |||||||||||| |||||||||||
Sbjct: 101023 gcttcggcttcgtcgtcttctccg 101046
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>gb|AF288222.3| Xanthomonas oryzae pv. oryzae phosphoribosylformylglycinamidine
            synthetase (purL) gene, partial cds; outer membrane
            protein XadA (xadA) and truncated serine protease genes,
            complete cds; and XpsE gene, partial cds
          Length = 7609

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 205  gcgccgccacaccgacggcg 224
            ||||||||||||||||||||
Sbjct: 3278 gcgccgccacaccgacggcg 3259
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 200     gcggagcgccgccacaccgacggc 223
               |||| |||||||||||||||||||
Sbjct: 4276969 gcggtgcgccgccacaccgacggc 4276946
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 72      tcatggagcccggccgcgagccca 95
               ||||||||| ||||||||||||||
Sbjct: 2962259 tcatggagcacggccgcgagccca 2962236
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>emb|BX000706.10| Zebrafish DNA sequence from clone CH211-204D18 in linkage group 2,
             complete sequence
          Length = 95120

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   ggcggagcgccgccacaccg 218
             ||||||||||||||||||||
Sbjct: 23381 ggcggagcgccgccacaccg 23400
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 258     acgtcggcgaggaggtggcgttcg 281
               |||||||||| |||||||||||||
Sbjct: 2085364 acgtcggcgacgaggtggcgttcg 2085341
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>dbj|AB091764.1| Pseudomonas putida sfnECR operon genes for NADH-dependent FMN
           reductase, putative FMNH2-dependent monooxygenase,
           sigma54-dependent transcriptional regulator, complete
           cds
          Length = 3304

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ccgagcgcgccgtgccgctg 349
           ||||||||||||||||||||
Sbjct: 876 ccgagcgcgccgtgccgctg 895
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>dbj|AK120962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039O15, full
           insert sequence
          Length = 5254

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 gcttcggcttcgacgtcttctccg 155
           |||||||||||| |||||||||||
Sbjct: 273 gcttcggcttcgtcgtcttctccg 296
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>dbj|AK109464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F05, full
           insert sequence
          Length = 1862

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 257 gacgtcggcgaggaggtggcgttc 280
           ||||||||||||||||| ||||||
Sbjct: 714 gacgtcggcgaggaggttgcgttc 737
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 77      gagcccggccgcgagcccaccggc 100
               |||| |||||||||||||||||||
Sbjct: 1477707 gagcgcggccgcgagcccaccggc 1477730
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>dbj|AK064886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K11, full
           insert sequence
          Length = 1403

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 gacgtcggcgaggaggtggcgttc 280
           ||||||||||||||||| ||||||
Sbjct: 604 gacgtcggcgaggaggttgcgttc 581
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 96      ccggcacggtcgtcttcgcc 115
               ||||||||||||||||||||
Sbjct: 1206279 ccggcacggtcgtcttcgcc 1206260
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     tcaccagcttcggcttcgac 145
               ||||||||||||||||||||
Sbjct: 1581294 tcaccagcttcggcttcgac 1581313
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 132      gcttcggcttcgacgtcttctccg 155
                |||||||||||| |||||||||||
Sbjct: 16925611 gcttcggcttcgtcgtcttctccg 16925634
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 77      gagcccggccgcgagcccaccggc 100
               |||||||||| |||||||||||||
Sbjct: 2672392 gagcccggccccgagcccaccggc 2672415


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,065,348
Number of Sequences: 3902068
Number of extensions: 2065348
Number of successful extensions: 47661
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46379
Number of HSP's gapped (non-prelim): 1282
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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