ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet96g03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1700 Score = 278 bits (140), Expect = 1e-71 Identities = 268/311 (86%) Strand = Plus / Plus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||| | |||||||| ||||||||||| || ||||||||| Sbjct: 826 cacgaggcaatgagcaacgaatggatggaaaatgggcagtgcccacttgcccggtcttac 885 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 886 cgagcaatgagtggcattctgccccttgttgcaaaggctttacaaccaccagcaggtgtg 945 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||||||||| | || ||| ||| |||||||| ||||| || || Sbjct: 946 aagctgaagtgcccgcctgctgtggtcgctatacgtgcagcccttgcacggactgaactt 1005 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| |||||||| |||||||||||||||||||| || |||| || Sbjct: 1006 gtgaagtctctccgtccccagcccctgcctgcaaagatggtagccattgcgttgcttgga 1065 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1066 atggcagcaaacatccctctcggggtgtggcgtgagcacaccaagaaattctccccgcag 1125 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 1126 tggtttgcagc 1136
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 278 bits (140), Expect = 1e-71 Identities = 268/311 (86%) Strand = Plus / Minus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||| | |||||||| ||||||||||| || ||||||||| Sbjct: 3216368 cacgaggcaatgagcaacgaatggatggaaaatgggcagtgcccacttgcccggtcttac 3216309 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 3216308 cgagcaatgagtggcattctgccccttgttgcaaaggctttacaaccaccagcaggtgtg 3216249 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||||||||| | || ||| ||| |||||||| ||||| || || Sbjct: 3216248 aagctgaagtgcccgcctgctgtggtcgctatacgtgcagcccttgcacggactgaactt 3216189 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| |||||||| |||||||||||||||||||| || |||| || Sbjct: 3216188 gtgaagtctctccgtccccagcccctgcctgcaaagatggtagccattgcgttgcttgga 3216129 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 3216128 atggcagcaaacatccctctcggggtgtggcgtgagcacaccaagaaattctccccgcag 3216069 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 3216068 tggtttgcagc 3216058
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 278 bits (140), Expect = 1e-71 Identities = 268/311 (86%) Strand = Plus / Minus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||| | |||||||| ||||||||||| || ||||||||| Sbjct: 131358 cacgaggcaatgagcaacgaatggatggaaaatgggcagtgcccacttgcccggtcttac 131299 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 131298 cgagcaatgagtggcattctgccccttgttgcaaaggctttacaaccaccagcaggtgtg 131239 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||||||||| | || ||| ||| |||||||| ||||| || || Sbjct: 131238 aagctgaagtgcccgcctgctgtggtcgctatacgtgcagcccttgcacggactgaactt 131179 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| |||||||| |||||||||||||||||||| || |||| || Sbjct: 131178 gtgaagtctctccgtccccagcccctgcctgcaaagatggtagccattgcgttgcttgga 131119 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 131118 atggcagcaaacatccctctcggggtgtggcgtgagcacaccaagaaattctccccgcag 131059 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 131058 tggtttgcagc 131048
>dbj|AK065419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021B09, full insert sequence Length = 1699 Score = 278 bits (140), Expect = 1e-71 Identities = 268/311 (86%) Strand = Plus / Plus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||| | |||||||| ||||||||||| || ||||||||| Sbjct: 825 cacgaggcaatgagcaacgaatggatggaaaatgggcagtgcccacttgcccggtcttac 884 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 885 cgagcaatgagtggcattctgccccttgttgcaaaggctttacaaccaccagcaggtgtg 944 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||||||||| | || ||| ||| |||||||| ||||| || || Sbjct: 945 aagctgaagtgcccgcctgctgtggtcgctatacgtgcagcccttgcacggactgaactt 1004 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| |||||||| |||||||||||||||||||| || |||| || Sbjct: 1005 gtgaagtctctccgtccccagcccctgcctgcaaagatggtagccattgcgttgcttgga 1064 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1065 atggcagcaaacatccctctcggggtgtggcgtgagcacaccaagaaattctccccgcag 1124 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 1125 tggtttgcagc 1135
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 278 bits (140), Expect = 1e-71 Identities = 268/311 (86%) Strand = Plus / Minus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||| | |||||||| ||||||||||| || ||||||||| Sbjct: 26061 cacgaggcaatgagcaacgaatggatggaaaatgggcagtgcccacttgcccggtcttac 26002 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 26001 cgagcaatgagtggcattctgccccttgttgcaaaggctttacaaccaccagcaggtgtg 25942 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||||||||| | || ||| ||| |||||||| ||||| || || Sbjct: 25941 aagctgaagtgcccgcctgctgtggtcgctatacgtgcagcccttgcacggactgaactt 25882 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| |||||||| |||||||||||||||||||| || |||| || Sbjct: 25881 gtgaagtctctccgtccccagcccctgcctgcaaagatggtagccattgcgttgcttgga 25822 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 25821 atggcagcaaacatccctctcggggtgtggcgtgagcacaccaagaaattctccccgcag 25762 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 25761 tggtttgcagc 25751
>ref|XM_550510.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1116 Score = 270 bits (136), Expect = 3e-69 Identities = 267/311 (85%) Strand = Plus / Plus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 496 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 555 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 556 cgagcaatgagtggcattctgccccttgttgccaaggctttacaaccaccagccggtgtg 615 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||| ||||| | || |||| || |||||||| ||||| || || Sbjct: 616 aagctgaagtgcccacctgctgtggtcgctgtgcgtgcagcccttgcacggactgaactt 675 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| ||||| || |||||||||||||||||||| || ||||||| Sbjct: 676 gtgaagtctctccgtccccagcctctgcctgcaaagatggtagccattgcgttgctcgga 735 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 736 atggcagcaaacatccctcttggggtgtggcgtgagcacaccaagaaattctcccctcag 795 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 796 tggtttgcagc 806
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 270 bits (136), Expect = 3e-69 Identities = 267/311 (85%) Strand = Plus / Minus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 876833 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 876774 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 876773 cgagcaatgagtggcattctgccccttgttgccaaggctttacaaccaccagccggtgtg 876714 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||| ||||| | || |||| || |||||||| ||||| || || Sbjct: 876713 aagctgaagtgcccacctgctgtggtcgctgtgcgtgcagcccttgcacggactgaactt 876654 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| ||||| || |||||||||||||||||||| || ||||||| Sbjct: 876653 gtgaagtctctccgtccccagcctctgcctgcaaagatggtagccattgcgttgctcgga 876594 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 876593 atggcagcaaacatccctcttggggtgtggcgtgagcacaccaagaaattctcccctcag 876534 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 876533 tggtttgcagc 876523
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 270 bits (136), Expect = 3e-69 Identities = 267/311 (85%) Strand = Plus / Minus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 57728 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 57669 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 57668 cgagcaatgagtggcattctgccccttgttgccaaggctttacaaccaccagccggtgtg 57609 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||| ||||| | || |||| || |||||||| ||||| || || Sbjct: 57608 aagctgaagtgcccacctgctgtggtcgctgtgcgtgcagcccttgcacggactgaactt 57549 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| ||||| || |||||||||||||||||||| || ||||||| Sbjct: 57548 gtgaagtctctccgtccccagcctctgcctgcaaagatggtagccattgcgttgctcgga 57489 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 57488 atggcagcaaacatccctcttggggtgtggcgtgagcacaccaagaaattctcccctcag 57429 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 57428 tggtttgcagc 57418
>dbj|AK062240.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E07, full insert sequence Length = 1116 Score = 270 bits (136), Expect = 3e-69 Identities = 267/311 (85%) Strand = Plus / Plus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 232 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 291 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 292 cgagcaatgagtggcattctgccccttgttgccaaggctttacaaccaccagccggtgtg 351 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||| ||||| | || |||| || |||||||| ||||| || || Sbjct: 352 aagctgaagtgcccacctgctgtggtcgctgtgcgtgcagcccttgcacggactgaactt 411 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| ||||| || |||||||||||||||||||| || ||||||| Sbjct: 412 gtgaagtctctccgtccccagcctctgcctgcaaagatggtagccattgcgttgctcgga 471 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 472 atggcagcaaacatccctcttggggtgtggcgtgagcacaccaagaaattctcccctcag 531 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 532 tggtttgcagc 542
>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) Length = 11618 Score = 262 bits (132), Expect = 6e-67 Identities = 266/311 (85%) Strand = Plus / Minus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 8921 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 8862 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 8861 cgagcaatgagtggcattctgccccttgttgccaaggctttacaaccaccagccggtgtg 8802 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||| ||||| | || |||| || |||||||| ||||| || || Sbjct: 8801 aagctgaagtgcccacctgctgtggtcgctgtgcgtgcagcccttgcacggactgaactt 8742 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||||| ||||| || |||||||||||||||||||| || |||| || Sbjct: 8741 gtgaagtctctccgtccccagcctctgcctgcaaagatggtagccattgcgttgcttgga 8682 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 8681 atggcagcaaacatccctcttggggtgtggcgtgagcacaccaagaaattctcccctcag 8622 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 8621 tggtttgcagc 8611
>dbj|AK069560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020P18, full insert sequence Length = 3418 Score = 262 bits (132), Expect = 6e-67 Identities = 266/311 (85%) Strand = Plus / Plus Query: 18 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 77 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 2610 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 2669 Query: 78 cgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagccaccagctggtatg 137 || ||||||||||| ||||||||||||| || ||||| |||| |||||||| ||| || Sbjct: 2670 cgagcaatgagtggcattctgccccttgttgccaaggctttacaaccaccagccggtgtg 2729 Query: 138 aagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgcacgcacaaccctc 197 |||||||||||||| ||||| | || |||| || |||||||| ||||| || || Sbjct: 2730 aagctgaagtgcccacctgctgtggtcgctgtgcgtgcagcccttgcacggactgaactt 2789 Query: 198 gtgaagtccctccgtccacagcccctacctgcaaagatggtagccatcgcaatgctcggg 257 |||||||| |||||| | ||||| || |||||||||||||||||||| || ||||||| Sbjct: 2790 gtgaagtctctccgtacccagcctctgcctgcaaagatggtagccattgcgttgctcgga 2849 Query: 258 atggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctccccccag 317 |||||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 2850 atggcagcaaacatccctcttggggtgtggcgtgagcacaccaagaaattctcccctcag 2909 Query: 318 tggttcgcagc 328 ||||| ||||| Sbjct: 2910 tggtttgcagc 2920
>gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence Length = 1457 Score = 256 bits (129), Expect = 4e-65 Identities = 275/324 (84%) Strand = Plus / Plus Query: 5 caacccaccgtcccacgaggcaatgagcgatgaatggctagaaaatggacagtgcccact 64 ||||||||| || || |||||| | |||||||| ||| | |||||||| ||||||||||| Sbjct: 552 caacccaccatcacatgaggcattcagcgatgagtggttggaaaatggccagtgcccact 611 Query: 65 cgctcggtcttaccgggcaatgagtggtgttctgccccttgtcgcgaaggcactacagcc 124 || ||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||| Sbjct: 612 tgcgcggtcttaccgggcaatgagtggtgttttgcccctcgtcgccaaggctttacagcc 671 Query: 125 accagctggtatgaagctgaagtgcccgcctgcaattgttgctgcacgagcagccctcgc 184 ||||| ||||||||||||||||||||| ||||| | ||||||| ||||| ||||| || Sbjct: 672 accaggtggtatgaagctgaagtgcccacctgctgtggttgctgtccgagctgcccttgc 731 Query: 185 acgcacaaccctcgtgaagtccctccgtccacagcccctacctgcaaagatggtagccat 244 ||| || | || ||||| ||||| || ||||||||||| || |||||||||||||||| Sbjct: 732 acgaactgcgcttgtgaaatccctgcgaccacagcccctgccctcaaagatggtagccat 791 Query: 245 cgcaatgctcgggatggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaa 304 ||| | || |||||||| |||||| ||||||| || |||||||| |||||||||||||| Sbjct: 792 tgcactactggggatggcggcaaacatccctcttggggtgtggcgggagcacaccaagaa 851 Query: 305 attctccccccagtggttcgcagc 328 ||||| || |||||||| ||||| Sbjct: 852 gttctctcctcagtggtttgcagc 875
>gb|AF192975.1|AF192975 Oryza sativa unknown gene Length = 673 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/73 (91%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 256 ggatggcagcaaacgtccctctcggngtgtggcgtgagcacaccaagaaattctcccccc 315 |||||||||||||| ||| ||| || |||||||||||||||||||||||||||||||| | Sbjct: 17 ggatggcagcaaac-tccatcttggggtgtggcgtgagcacaccaagaaattctcccctc 75 Query: 316 agtggttcgcagc 328 ||||||| ||||| Sbjct: 76 agtggtttgcagc 88
>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete sequence Length = 217187 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 aatggctagaaaatggacagtgcc 60 ||||||||||| |||||||||||| Sbjct: 160034 aatggctagaatatggacagtgcc 160011
>ref|NM_191489.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3867 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 agaaaatggacagtgcccac 63 |||||||||||||||||||| Sbjct: 804 agaaaatggacagtgcccac 823
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 agaaaatggacagtgcccac 63 |||||||||||||||||||| Sbjct: 33093938 agaaaatggacagtgcccac 33093957
>gb|AC104809.5| Homo sapiens BAC clone RP11-637O3 from 2, complete sequence Length = 167196 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gaaggcactacagccaccag 129 |||||||||||||||||||| Sbjct: 84721 gaaggcactacagccaccag 84740
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 agaaaatggacagtgcccac 63 |||||||||||||||||||| Sbjct: 30848 agaaaatggacagtgcccac 30867
>dbj|AK068412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154B18, full insert sequence Length = 4412 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 agaaaatggacagtgcccac 63 |||||||||||||||||||| Sbjct: 1188 agaaaatggacagtgcccac 1207
>emb|CT010473.14| Mouse DNA sequence from clone RP23-238D5 on chromosome 17, complete sequence Length = 173998 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 aatggctagaaaatggacagtgcc 60 ||||||||||| |||||||||||| Sbjct: 9778 aatggctagaatatggacagtgcc 9755 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,853,367 Number of Sequences: 3902068 Number of extensions: 1853367 Number of successful extensions: 32719 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 32670 Number of HSP's gapped (non-prelim): 48 length of query: 332 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 310 effective length of database: 17,147,199,772 effective search space: 5315631929320 effective search space used: 5315631929320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
