>POLS_SINDV (P03316) Structural polyprotein (p130) [Contains: Capsid protein (EC|
            3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3 protein
            (Spike glycoprotein E3); E2 envelope glycoprotein (Spike
            glycoprotein E2); 6K protein; E1 envelope glycoprotein
            (Spike g
          Length = 1245

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 66   GGAWPFLVGGAICLVNSVNERDLSLLTSYAEPTAAPHVK 182
            GG +PF+ GGA C  +S N +        +   A+ H +
Sbjct: 888  GGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQ 926

>IDLC_STRPU (Q26630) 33 kDa inner dynein arm light chain, axonemal (p33)|
          Length = 260

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -1

Query: 94  PPTKNGHAPPPIESRKSSQ------SVNPCYVWT 11
           PP K G   PP+ES+K+ Q      S+ P   WT
Sbjct: 47  PPPKGGSKLPPVESQKAQQTDEILNSILPPREWT 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,132,302
Number of Sequences: 219361
Number of extensions: 480848
Number of successful extensions: 1183
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)