ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet96f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GTR8_RAT (Q9JJZ1) Solute carrier family 2, facilitated glucose t... 36 0.055
2GTR8_MOUSE (Q9JIF3) Solute carrier family 2, facilitated glucose... 34 0.16
3GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose... 32 0.61
4GTR8_HUMAN (Q9NY64) Solute carrier family 2, facilitated glucose... 32 0.79
5GTR8_BOVIN (P58354) Solute carrier family 2, facilitated glucose... 32 0.79
6ITCH_MOUSE (Q8C863) Itchy E3 ubiquitin protein ligase (EC 6.3.2.-) 29 5.1
7MCM3_SCHPO (P30666) DNA replication licensing factor mcm3 (Minic... 29 6.7
8DPP2_MOUSE (Q9ET22) Dipeptidyl-peptidase 2 precursor (EC 3.4.14.... 29 6.7

>GTR8_RAT (Q9JJZ1) Solute carrier family 2, facilitated glucose transporter|
           member 8 (Glucose transporter type 8) (Glucose
           transporter type X1)
          Length = 478

 Score = 35.8 bits (81), Expect = 0.055
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +3

Query: 297 FLCTMIVALGPIQFGFTGGFSSPTQDAIIRD----LNLSISEFSVFGSLST 437
           FL T   ALGP+ FGF  G+SSP   ++ R     L L  +  S FG++ T
Sbjct: 27  FLATFAAALGPLSFGFALGYSSPAIPSLRRTAPPALRLGDTAASWFGAVVT 77



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>GTR8_MOUSE (Q9JIF3) Solute carrier family 2, facilitated glucose transporter|
           member 8 (Glucose transporter type 8) (Glucose
           transporter type X1)
          Length = 477

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +3

Query: 297 FLCTMIVALGPIQFGFTGGFSSPTQDAIIRD----LNLSISEFSVFGSLST 437
           FL +   ALGP+ FGF  G+SSP   ++ R     L L  +  S FG++ T
Sbjct: 27  FLASFAAALGPLSFGFALGYSSPAIPSLRRTAPPALRLGDNAASWFGAVVT 77



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>GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose transporter|
           member 6 (Glucose transporter type 6) (Glucose
           transporter type 9)
          Length = 507

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +3

Query: 297 FLCTMIVALGPIQFGFTGGFSSPTQDAIIR----DLNLSISEFSVFGSLST 437
           FL T    LG   FG+   ++SP   A+ R    DL+L+ S+ S FGS+ T
Sbjct: 39  FLATFAAVLGNFSFGYALVYTSPVIPALERSLDPDLHLTKSQASWFGSVFT 89



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>GTR8_HUMAN (Q9NY64) Solute carrier family 2, facilitated glucose transporter|
           member 8 (Glucose transporter type 8) (Glucose
           transporter type X1)
          Length = 477

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 297 FLCTMIVALGPIQFGFTGGFSSPTQDAIIR 386
           FL     ALGP+ FGF  G+SSP   ++ R
Sbjct: 27  FLAAFAAALGPLSFGFALGYSSPAIPSLQR 56



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>GTR8_BOVIN (P58354) Solute carrier family 2, facilitated glucose transporter|
           member 8 (Glucose transporter type 8) (Glucose
           transporter type X1)
          Length = 478

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 297 FLCTMIVALGPIQFGFTGGFSSPTQDAIIR 386
           FL     ALGP+ FGF  G+SSP   ++ R
Sbjct: 27  FLAAFAAALGPLSFGFALGYSSPAIPSLRR 56



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>ITCH_MOUSE (Q8C863) Itchy E3 ubiquitin protein ligase (EC 6.3.2.-)|
          Length = 864

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 20/86 (23%), Positives = 36/86 (41%)
 Frame = -3

Query: 433 DSEPNTENSEMERLRSRMMASWVGEEKPPVKPNWMGPSATIMVQRKAETWDSRMMAMEEV 254
           DS P  ++     ++S++  + +  +    K NW GPS  + V    ++  +        
Sbjct: 3   DSGPQLDSMGSLTMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNS 62

Query: 253 PAVRLDWRDPIRYQLPVLTSSGCFRV 176
           P     W+ P+   +   TS  CFRV
Sbjct: 63  P----KWKQPLTV-IVTPTSKLCFRV 83



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>MCM3_SCHPO (P30666) DNA replication licensing factor mcm3 (Minichromosome|
           maintenance protein 3)
          Length = 879

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = +3

Query: 174 DTRKQPLLVNTGSWYR-MGSRQSSLTAGTSSMAIMRESHVSAFLCTMIVALGPIQ-FGFT 347
           DT K    VN    YR MGS+ S  T+ T    ++  +         +V LG     G  
Sbjct: 232 DTVKPGDRVNIVGQYRSMGSKTSGNTSATFRTVLLANN---------VVLLGNKPGLGNV 282

Query: 348 GGFSSPTQDAIIRDLNLSISEFSVFGSLSTS 440
           GG +    DA IR++N    + +VF  LSTS
Sbjct: 283 GGGALDITDADIRNINKLARKKNVFELLSTS 313



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>DPP2_MOUSE (Q9ET22) Dipeptidyl-peptidase 2 precursor (EC 3.4.14.2)|
           (Dipeptidyl-peptidase II) (DPP II) (Dipeptidyl
           aminopeptidase II) (Quiescent cell proline dipeptidase)
           (Dipeptidyl peptidase 7)
          Length = 506

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
 Frame = -3

Query: 457 GADHGADV---DSEPNTENSEMERLRSRMMASWVGEE--KPPVKPNWMGP 323
           G  H  D+   +SE      E+ +L S ++  WV     K P  P W+GP
Sbjct: 450 GGAHHLDLRASNSEDPPSVVEVRKLESTLIREWVAAARLKQPAMPRWLGP 499


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,430,405
Number of Sequences: 219361
Number of extensions: 409502
Number of successful extensions: 1408
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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