ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet96e01 |
|---|---|
| Clone Library Name | barley_pub |
>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) Length = 417 Score = 192 bits (489), Expect = 2e-49 Identities = 99/133 (74%), Positives = 99/133 (74%) Frame = +1 Query: 46 MASAMELSLLNPAMHHYGIAAKTASHLPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 225 MASAMELSLLNPAMHHYGIAAKTASHLPVVP Sbjct: 1 MASAMELSLLNPAMHHYGIAAKTASHLPVVPARRASSGAVRFRVRAAAAAPPAPAAKPGS 60 Query: 226 XXXXXKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFI 405 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFI Sbjct: 61 PKKRGKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFI 120 Query: 406 RNPEFKEAADKMQ 444 RNPEFKEAADKMQ Sbjct: 121 RNPEFKEAADKMQ 133
>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 125 bits (313), Expect = 6e-29 Identities = 58/68 (85%), Positives = 63/68 (92%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K E+NE+LLTPRFYTTDFDEME LFN EINK+LNQ EF+ALLQEFKTDYNQTHF+RN EF Sbjct: 54 KKEINETLLTPRFYTTDFDEMETLFNTEINKKLNQSEFEALLQEFKTDYNQTHFVRNKEF 113 Query: 421 KEAADKMQ 444 KEAADKMQ Sbjct: 114 KEAADKMQ 121
>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Copper response defect 1 protein) (Dicarboxylate diiron protein) (AtZIP Length = 409 Score = 121 bits (303), Expect = 9e-28 Identities = 56/68 (82%), Positives = 62/68 (91%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K E+ ESLLTPRFYTTDF+EMEQLFN EINK LN+ EF+ALLQEFKTDYNQTHF+RN EF Sbjct: 58 KKEIQESLLTPRFYTTDFEEMEQLFNTEINKNLNEAEFEALLQEFKTDYNQTHFVRNKEF 117 Query: 421 KEAADKMQ 444 KEAADK+Q Sbjct: 118 KEAADKLQ 125
>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 117 bits (294), Expect = 1e-26 Identities = 54/67 (80%), Positives = 60/67 (89%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 KT + E+LLTPRFYTTDFDEME LFN EINK LNQ EF++LLQEFKTDYNQTHF+RN EF Sbjct: 54 KTAIKETLLTPRFYTTDFDEMEALFNTEINKNLNQSEFESLLQEFKTDYNQTHFVRNKEF 113 Query: 421 KEAADKM 441 KEAADK+ Sbjct: 114 KEAADKI 120
>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) (Copper target homolog 1 protein) Length = 407 Score = 100 bits (248), Expect = 2e-21 Identities = 44/68 (64%), Positives = 57/68 (83%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K +E+LLTPRFYTTDFDEME+LF+ E+NK ++ +EF+A+L EFK DYNQ HF+RN F Sbjct: 56 KVASDETLLTPRFYTTDFDEMERLFSLELNKNMDMEEFEAMLNEFKLDYNQRHFVRNETF 115 Query: 421 KEAADKMQ 444 KEAA+K+Q Sbjct: 116 KEAAEKIQ 123
>CRD1_CHLRE (Q9LD46) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) (Copper response defect 1 protein) (Copper-response target 1 protein Length = 407 Score = 92.8 bits (229), Expect = 3e-19 Identities = 42/67 (62%), Positives = 51/67 (76%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K E+LLTPRFYTTDFDEMEQLF+ EIN L+ +E +A L EF+ DYN+ HF+RN F Sbjct: 56 KVAAKETLLTPRFYTTDFDEMEQLFSKEINPNLDMEELNACLNEFRNDYNKVHFVRNETF 115 Query: 421 KEAADKM 441 K AADK+ Sbjct: 116 KAAADKV 122
>ACSF_GRATL (Q6B8U1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 75.9 bits (185), Expect = 4e-14 Identities = 37/63 (58%), Positives = 48/63 (76%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 +T V E+LLTPRFYTTDFDEM +L + N DEF+ALLQEF+ DYN+ HFIR+ EF Sbjct: 9 QTPVKETLLTPRFYTTDFDEMSKL-----DISSNIDEFEALLQEFRADYNRQHFIRDQEF 63 Query: 421 KEA 429 +++ Sbjct: 64 EQS 66
>ACSF3_ANASP (Q8YRZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 3 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 3) Length = 358 Score = 72.4 bits (176), Expect = 5e-13 Identities = 34/65 (52%), Positives = 48/65 (73%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K E+LLTPRFYTTDFDEM A ++ +N+DE A+L+EF+TDYN+ HF+R+ EF Sbjct: 18 KVPAKETLLTPRFYTTDFDEM-----ARMDISVNEDELLAILEEFRTDYNRHHFVRDAEF 72 Query: 421 KEAAD 435 +++ D Sbjct: 73 EKSWD 77
>ACSF1_SYNY3 (P72584) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 358 Score = 70.9 bits (172), Expect = 1e-12 Identities = 33/65 (50%), Positives = 46/65 (70%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 KT E++LTPRFYTTDFDEM A+++ N+DE A+L+EF+ DYN+ HF+RN F Sbjct: 18 KTPAKETILTPRFYTTDFDEM-----AKMDISPNEDELRAILEEFRVDYNRHHFVRNESF 72 Query: 421 KEAAD 435 ++ D Sbjct: 73 NKSWD 77
>ACSF_PROMP (Q7V1M1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 390 Score = 70.5 bits (171), Expect = 2e-12 Identities = 31/67 (46%), Positives = 48/67 (71%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K +++LTP FYTTDF+ ME++ + +N+DE +A+ +EF+ DYN+ HF+RN EF Sbjct: 18 KDIAKDTILTPNFYTTDFEAMEKM-----DLSINEDELEAICEEFRKDYNRHHFVRNKEF 72 Query: 421 KEAADKM 441 + AADK+ Sbjct: 73 EGAADKI 79
>ACSF_SYNPX (Q7U6Y8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 356 Score = 69.7 bits (169), Expect = 3e-12 Identities = 32/67 (47%), Positives = 48/67 (71%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K V +++LTPRFYTTDFD+M A ++ + N+ E +A+ +EF+ DYN+ HF+RN +F Sbjct: 16 KDPVKDTILTPRFYTTDFDDM-----AAMDLRPNEAELEAICEEFRKDYNRHHFVRNDDF 70 Query: 421 KEAADKM 441 AADK+ Sbjct: 71 DGAADKL 77
>ACSF_SYNP6 (Q5MZZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 68.2 bits (165), Expect = 9e-12 Identities = 32/67 (47%), Positives = 45/67 (67%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K E++LTPRFYTTDF+ M A+++ N+DE A+L+EF+ DYN+ HF+R PEF Sbjct: 18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVRTPEF 72 Query: 421 KEAADKM 441 +A M Sbjct: 73 DGSAADM 79
>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 66.2 bits (160), Expect = 3e-11 Identities = 31/63 (49%), Positives = 43/63 (68%) Frame = +1 Query: 256 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEAAD 435 E+LLTPRFYTTDF+EM A +N N+ +F A+L+EF+ DYN HFIR EF ++ Sbjct: 14 ETLLTPRFYTTDFEEM-----ASMNISENEQDFFAILEEFRADYNSQHFIRGEEFNQSWS 68 Query: 436 KMQ 444 ++ Sbjct: 69 NLE 71
>ACSF2_SYNY3 (P74134) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 65.5 bits (158), Expect = 6e-11 Identities = 31/65 (47%), Positives = 43/65 (66%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K V E+LLTPRFYTTDFD++ A + L +E +A L+E + DYN+ HF+RN +F Sbjct: 18 KAPVKETLLTPRFYTTDFDKV-----ANLVLTLQDEEIEAALEELRADYNRYHFVRNDDF 72 Query: 421 KEAAD 435 K + D Sbjct: 73 KRSFD 77
>ACSF_CYAME (Q85FX6) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 335 Score = 65.1 bits (157), Expect = 7e-11 Identities = 32/62 (51%), Positives = 46/62 (74%) Frame = +1 Query: 256 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEAAD 435 ++LLTPRFYTTDFD+M + +I+K N+ E +A++ EF+ DYNQTHFIR+ EF + Sbjct: 12 QTLLTPRFYTTDFDQMAKY---DISK--NRAEIEAIVNEFRKDYNQTHFIRDDEFDQVWT 66 Query: 436 KM 441 +M Sbjct: 67 QM 68
>ACSF2_ANASP (Q8YVU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 64.3 bits (155), Expect = 1e-10 Identities = 30/65 (46%), Positives = 44/65 (67%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K V E+LLTPRFYTTDFD + A ++ N+ E A+++E + DYN+ HF+R+ EF Sbjct: 18 KAPVQETLLTPRFYTTDFDAV-----ANLDISANETEIRAIVEELRADYNRHHFVRDEEF 72 Query: 421 KEAAD 435 K++ D Sbjct: 73 KQSWD 77
>ACSF1_SYNEL (Q8DJ05) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 380 Score = 63.2 bits (152), Expect = 3e-10 Identities = 29/65 (44%), Positives = 44/65 (67%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K E++LTPRFYTTDF+ M + E N+ E +A+L+EF+ DYN+ HF+R+ EF Sbjct: 18 KAPAKETILTPRFYTTDFEAMANMDITE-----NKAELEAILEEFRCDYNRHHFVRDEEF 72 Query: 421 KEAAD 435 +++ D Sbjct: 73 EQSWD 77
>ACSF_CYACA (Q9TLR8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 354 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/60 (46%), Positives = 41/60 (68%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 K + E+LL PRFYTTDFDE+ + + N +E +A++ EF++DYN+ HFIR+ EF Sbjct: 11 KKTIKETLLAPRFYTTDFDEISRY-----DISSNFEEIEAIVNEFRSDYNKKHFIRDEEF 65
>ACSF2_SYNEL (Q8DI68) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 354 Score = 58.5 bits (140), Expect = 7e-09 Identities = 27/62 (43%), Positives = 44/62 (70%) Frame = +1 Query: 250 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEA 429 + E+LLTPRFYTTDF++ +L ++++Q Q++ +A+L E + DYN+ HF+R+ FK Sbjct: 17 IRENLLTPRFYTTDFEQAAKL---DLSRQ--QEQLEAMLAEMRADYNRHHFVRDDSFKGT 71 Query: 430 AD 435 D Sbjct: 72 WD 73
>ACSF_GLOVI (Q7NFA1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 346 Score = 57.8 bits (138), Expect = 1e-08 Identities = 29/67 (43%), Positives = 45/67 (67%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 ++E E+LLTPRFYTTDF+ + A+++ + +F+ALL EF+ DYN+ HF R+ F Sbjct: 13 QSERRETLLTPRFYTTDFEAL-----AKLDISAMEADFEALLAEFQADYNREHFQRDAGF 67 Query: 421 KEAADKM 441 E A ++ Sbjct: 68 VEQAHQI 74
>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 351 Score = 55.1 bits (131), Expect = 8e-08 Identities = 25/63 (39%), Positives = 40/63 (63%) Frame = +1 Query: 241 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 KT E++LTPRFYTTDF+ A ++ ++E A+L E + DYN+ HF+R+ F Sbjct: 11 KTPSKETVLTPRFYTTDFETA-----ANLDLSAQENELQAMLAEMRADYNRHHFVRDEAF 65 Query: 421 KEA 429 +++ Sbjct: 66 EQS 68
>ACSF_RHOPA (Q6N9J7) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 365 Score = 48.5 bits (114), Expect = 7e-06 Identities = 22/55 (40%), Positives = 37/55 (67%) Frame = +1 Query: 256 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF 420 +++LTPRFYTTD+ M++L + L + E+ A++ E + DYN++HF + EF Sbjct: 31 DTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELRADYNKSHFKKTDEF 80
>ACSF_RHOGE (Q8VPB5) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Frame = +1 Query: 259 SLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEF-KEAAD 435 +LL+PRFYTTD+ M + + I E+DA+L E++ D N HF R PEF +E A+ Sbjct: 21 TLLSPRFYTTDYAAMNAIDVSSIRA-----EWDAMLAEYEGDNNHDHFQRTPEFAQEVAE 75 Query: 436 K 438 + Sbjct: 76 R 76
>ACSF_PROMM (Q7V3Y9) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/62 (33%), Positives = 39/62 (62%) Frame = +1 Query: 250 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEA 429 ++++LLTPRFYTT+FD+ A+ + + + +F+A+ +E + DYN HF R + Sbjct: 23 LDDNLLTPRFYTTEFDKA-----AKTDLDIARKDFEAMFKEMEADYNLKHFDRKASLERL 77 Query: 430 AD 435 ++ Sbjct: 78 SE 79
>ACSF_PROMA (Q7VBV0) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 347 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/53 (39%), Positives = 37/53 (69%) Frame = +1 Query: 250 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 408 ++E+LLTPRFYTT+F++ A+ + ++ + +F+A+ +E + DYN HF R Sbjct: 21 LDENLLTPRFYTTEFEKA-----AKTDLEIARKDFEAMFKEMEADYNLKHFDR 68
>JJAZ_MOUSE (Q80U70) Polycomb protein Suz12 (Suppressor of zeste 12 protein| homolog) Length = 741 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -2 Query: 177 HAEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEEGELHGG 52 H G G GP+ G GG FGG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAAVAAAASGGKSGGG 44
>SUZ12_HUMAN (Q15022) Polycomb protein SUZ12 (Suppressor of zeste 12 protein| homolog) (Joined to JAZF1 protein) (Chromatin precipitated E2F target 9 protein) (ChET 9 protein) Length = 739 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -2 Query: 177 HAEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEEGELHGG 52 H G G GP+ G GG FGG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAVAAATASGGKSGGG 44
>UB2Q1_MOUSE (Q7TSS2) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) Length = 422 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 174 AEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEE 70 A A GAG G A G + G GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPSRGSVPGDPVRIHCNITE 110
>UB2Q1_HUMAN (Q7Z7E8) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) (Protein NICE-5) Length = 422 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 174 AEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEE 70 A A GAG G A G + G GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPPRGSVPGDPVRIHCNITE 110
>FGD4_HUMAN (Q96M96) FYVE, RhoGEF and PH domain-containing protein 4 (Actin| filament-binding protein frabin) (FGD1-related F-actin-binding protein) (Zinc finger FYVE domain-containing protein 6) Length = 766 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 253 NESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDA 360 NE LLT R Y D ++Q+F ++ ++ N+ F A Sbjct: 212 NELLLTERAYVNRLDLLDQVFYCKLLEEANRGSFPA 247
>Y081_MYCPN (P75612) Hypothetical ABC transporter ATP-binding protein MG065| homolog (R02_orf465) Length = 465 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 10/48 (20%) Frame = +1 Query: 280 YTTDFDEMEQLFNAEIN----------KQLNQDEFDALLQEFKTDYNQ 393 +TTD E+ Q+ NA +N KQL +D +A+L KT+Y + Sbjct: 16 FTTDAMELRQISNAYLNQAQAYLQKGLKQLKKDYKNAILYTPKTEYKR 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.129 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,236,385 Number of Sequences: 219361 Number of extensions: 607729 Number of successful extensions: 2738 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2583 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2716 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
