>MYOJ_DICDI (P54697) Myosin IJ heavy chain|
          Length = 2245

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 23/112 (20%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
 Frame = +2

Query: 2    KAGLDELEHWCHWLTEEYAGSSWDELKHIRQAVTLLILEEKHNKSLKEITDGFCPALSMQ 181
            K  +D L  W   +   + G   +  + +R+ + +L +++K      +I   +CP L+  
Sbjct: 2096 KTKIDFLTRWADDIGNVWVGDVANAFQQVREVINVLNIKDKEKIIDDKIRKQYCPTLNSN 2155

Query: 182  QLYRISTMYCDDKFGTLGIPSDVVSSMRAKMIGGSSSPSVQDD--INSFLLD 331
            QL ++ +++   +FG   + + V++S+       +    VQD+  +N+  +D
Sbjct: 2156 QLKQVLSLFSPGEFGGKRVSAKVIASICPPNKSSAGQSFVQDENKLNTIPID 2207

>PCNA_THEVO (Q979S2) DNA polymerase sliding clamp (Proliferating cell nuclear|
           antigen homolog) (PCNA)
          Length = 246

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -2

Query: 378 ISLATSSTENGMLKSSSRRKELMSSCTDG--LLDPPIILARMLDTTSDGMPKVPNLSSQY 205
           I LA SS   G+ K   + K  + + +    LLDP  I+           PK+PN++S+Y
Sbjct: 78  IRLANSSENVGITKDKEKLKFDLGNISKSVSLLDPSTIVT----------PKIPNIASEY 127

Query: 204 IVLIRYS 184
             +I+ S
Sbjct: 128 YAIIKRS 134

>UCK2_MOUSE (Q99PM9) Uridine-cytidine kinase 2 (EC 2.7.1.48) (UCK 2) (Uridine|
           monophosphokinase 2) (Cytidine monophosphokinase 2)
          Length = 261

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 465 QNHIQASNGEPFFSCISGGRSMSAMSTC 382
           QNH Q + GEPF   +SGG +    S C
Sbjct: 10  QNHQQPNGGEPFLIGVSGGTASGKSSVC 37

>UCK2_HUMAN (Q9BZX2) Uridine-cytidine kinase 2 (EC 2.7.1.48) (UCK 2) (Uridine|
           monophosphokinase 2) (Cytidine monophosphokinase 2)
          Length = 261

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 465 QNHIQASNGEPFFSCISGGRSMSAMSTC 382
           QNH Q + GEPF   +SGG +    S C
Sbjct: 10  QNHQQPNGGEPFLIGVSGGTASGKSSVC 37

>ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase ATXR3 (EC|
            2.1.1.43) (Trithorax-related protein 3) (TRX-related
            protein 3) (Protein SET DOMAIN GROUP 2)
          Length = 2351

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
 Frame = -2

Query: 423  CISGG------RSMSAMSTCTISLATSSTENGMLKSSSRRKELMSSCTDG 292
            CI GG      + M+ +    I LAT   E  M+ SS  R ELM S  DG
Sbjct: 1408 CIQGGGIEGGSKDMNRIIALFIQLATRLEEVSMITSSYGRDELMKSWQDG 1457

>PCNA_THEAC (Q9HJQ0) DNA polymerase sliding clamp (Proliferating cell nuclear|
           antigen homolog) (PCNA)
          Length = 246

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -2

Query: 378 ISLATSSTENGMLKSSSRRKELMSSCTDG--LLDPPIILARMLDTTSDGMPKVPNLSSQY 205
           I LA+SS   G+ K   + K  + +      LLDP  I+           PK+PN++S+Y
Sbjct: 78  IRLASSSENVGITKDGEKLKFELGTINKSISLLDPSTIVT----------PKIPNITSEY 127

Query: 204 IVLIRYS 184
             +++ S
Sbjct: 128 YAVLKKS 134

>RRPL_PUUMH (P27176) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 2156

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +2

Query: 233 GIPSDVVSSMRAKMIGGSSSPSVQDDINSF--LLDDDFSIPFSVDDVARLMVHVDMADMD 406
           G+P+DV+ SM  ++I GS S  +   + SF  +  D++ I  ++ +   + V  D+A   
Sbjct: 65  GVPNDVIQSMEKRIIPGSPSGQI---LRSFFKMTPDNYKITGNLIEFIEVTVTADVARGV 121

Query: 407 LPPLIQEKNGSPF 445
              +++ + G  F
Sbjct: 122 REKILKYQGGLEF 134

>SPB4_KLULA (Q6CN92) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)|
          Length = 596

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/26 (50%), Positives = 21/26 (80%)
 Frame = +2

Query: 245 DVVSSMRAKMIGGSSSPSVQDDINSF 322
           D +  +R++++ G+SS SV+DDINSF
Sbjct: 112 DNLYPIRSQLLVGTSSASVRDDINSF 137

>ERF2_ARATH (O80338) Ethylene-responsive transcription factor 2|
           (Ethylene-responsive element-binding factor 2) (EREBP-2)
           (AtERF2)
          Length = 243

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 19/50 (38%), Positives = 30/50 (60%)
 Frame = -2

Query: 456 IQASNGEPFFSCISGGRSMSAMSTCTISLATSSTENGMLKSSSRRKELMS 307
           ++ ++GEP    I+  RS S+ S+ + S  TSS+ENG LK   + + L S
Sbjct: 175 LRVNSGEPDPVRITSKRSSSSSSSSSSS--TSSSENGKLKRRRKAENLTS 222

>ZO6_XENLA (P18749) Oocyte zinc finger protein XLCOF6 (Fragment)|
          Length = 453

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -2

Query: 465 QNHIQASNGEPFFSCISGGRSMSAMSTCTISLATSSTE 352
           +NH +   GE  F+C   G+S SAMST      T + E
Sbjct: 335 RNHQRTHTGEKPFTCTECGKSYSAMSTLKSDRRTHTGE 372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,562,029
Number of Sequences: 219361
Number of extensions: 1297088
Number of successful extensions: 4175
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4170
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)