ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet96a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2040 Score = 412 bits (208), Expect = e-112 Identities = 318/355 (89%) Strand = Plus / Plus Query: 56 ctcccgtcgctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctc 115 |||||| |||||||||||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 832 ctcccggcgctgccgcggttcgggccgaagccccgttccaaggtgctggagatcgtgctc 891 Query: 116 ccgatcgccaccgcggcgttcgtcctcgtgctggccatcgccttcttcatgttcgtgcgc 175 |||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||| || Sbjct: 892 ccgatcgccaccgcggcgttcgtcctcgcgctggtcatcgccgccttcctgttcgtccgg 951 Query: 176 acgcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgc 235 | |||| | |||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 952 aggcgggtgaggtacgccgaggtgcgggaggactgggaggtggagttcggaccgcaccgc 1011 Query: 236 ttcgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggc 295 ||| | ||||||||||| ||| |||| |||||||||||||||||| ||||||||| ||| Sbjct: 1012 ttctcctacaaggagctctaccaggcgacaaaggggttcaagaacaagcagctgctcggc 1071 Query: 296 accggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcg 355 |||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 1072 accggcggattcggcagggtgtacaagggcgtgctcgcgaaatccaacctcgagatcgcc 1131 Query: 356 gngaagcgggtgtcgcacgactccaagcagggcatgaaggagttcatcgccgagg 410 | |||| |||||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 1132 gtgaagagggtgtcgcacgactcgaagcaagggatgaaggagttcatcgcggagg 1186
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 412 bits (208), Expect = e-112 Identities = 318/355 (89%) Strand = Plus / Plus Query: 56 ctcccgtcgctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctc 115 |||||| |||||||||||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 87621 ctcccggcgctgccgcggttcgggccgaagccccgttccaaggtgctggagatcgtgctc 87680 Query: 116 ccgatcgccaccgcggcgttcgtcctcgtgctggccatcgccttcttcatgttcgtgcgc 175 |||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||| || Sbjct: 87681 ccgatcgccaccgcggcgttcgtcctcgcgctggtcatcgccgccttcctgttcgtccgg 87740 Query: 176 acgcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgc 235 | |||| | |||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 87741 aggcgggtgaggtacgccgaggtgcgggaggactgggaggtggagttcggaccgcaccgc 87800 Query: 236 ttcgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggc 295 ||| | ||||||||||| ||| |||| |||||||||||||||||| ||||||||| ||| Sbjct: 87801 ttctcctacaaggagctctaccaggcgacaaaggggttcaagaacaagcagctgctcggc 87860 Query: 296 accggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcg 355 |||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 87861 accggcggattcggcagggtgtacaagggcgtgctcgcgaaatccaacctcgagatcgcc 87920 Query: 356 gngaagcgggtgtcgcacgactccaagcagggcatgaaggagttcatcgccgagg 410 | |||| |||||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 87921 gtgaagagggtgtcgcacgactcgaagcaagggatgaaggagttcatcgcggagg 87975 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Minus Query: 79 ccccaagccacggtccaaggtgctggagatcgtgctcccgat 120 ||||||||| ||||||||| ||| ||||||||||| ||||| Sbjct: 84410 ccccaagccgcggtccaagacgcttgagatcgtgctgccgat 84369
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 412 bits (208), Expect = e-112 Identities = 318/355 (89%) Strand = Plus / Plus Query: 56 ctcccgtcgctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctc 115 |||||| |||||||||||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 26550735 ctcccggcgctgccgcggttcgggccgaagccccgttccaaggtgctggagatcgtgctc 26550794 Query: 116 ccgatcgccaccgcggcgttcgtcctcgtgctggccatcgccttcttcatgttcgtgcgc 175 |||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||| || Sbjct: 26550795 ccgatcgccaccgcggcgttcgtcctcgcgctggtcatcgccgccttcctgttcgtccgg 26550854 Query: 176 acgcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgc 235 | |||| | |||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 26550855 aggcgggtgaggtacgccgaggtgcgggaggactgggaggtggagttcggaccgcaccgc 26550914 Query: 236 ttcgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggc 295 ||| | ||||||||||| ||| |||| |||||||||||||||||| ||||||||| ||| Sbjct: 26550915 ttctcctacaaggagctctaccaggcgacaaaggggttcaagaacaagcagctgctcggc 26550974 Query: 296 accggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcg 355 |||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 26550975 accggcggattcggcagggtgtacaagggcgtgctcgcgaaatccaacctcgagatcgcc 26551034 Query: 356 gngaagcgggtgtcgcacgactccaagcagggcatgaaggagttcatcgccgagg 410 | |||| |||||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 26551035 gtgaagagggtgtcgcacgactcgaagcaagggatgaaggagttcatcgcggagg 26551089 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Minus Query: 79 ccccaagccacggtccaaggtgctggagatcgtgctcccgat 120 ||||||||| ||||||||| ||| ||||||||||| ||||| Sbjct: 26547524 ccccaagccgcggtccaagacgcttgagatcgtgctgccgat 26547483
>dbj|AK107678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-A04, full insert sequence Length = 2366 Score = 412 bits (208), Expect = e-112 Identities = 318/355 (89%) Strand = Plus / Minus Query: 56 ctcccgtcgctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctc 115 |||||| |||||||||||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 1400 ctcccggcgctgccgcggttcgggccgaagccccgttccaaggtgctggagatcgtgctc 1341 Query: 116 ccgatcgccaccgcggcgttcgtcctcgtgctggccatcgccttcttcatgttcgtgcgc 175 |||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||| || Sbjct: 1340 ccgatcgccaccgcggcgttcgtcctcgcgctggtcatcgccgccttcctgttcgtccgg 1281 Query: 176 acgcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgc 235 | |||| | |||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1280 aggcgggtgaggtacgccgaggtgcgggaggactgggaggtggagttcggaccgcaccgc 1221 Query: 236 ttcgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggc 295 ||| | ||||||||||| ||| |||| |||||||||||||||||| ||||||||| ||| Sbjct: 1220 ttctcctacaaggagctctaccaggcgacaaaggggttcaagaacaagcagctgctcggc 1161 Query: 296 accggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcg 355 |||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 1160 accggcggattcggcagggtgtacaagggcgtgctcgcgaaatccaacctcgagatcgcc 1101 Query: 356 gngaagcgggtgtcgcacgactccaagcagggcatgaaggagttcatcgccgagg 410 | |||| |||||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 1100 gtgaagagggtgtcgcacgactcgaagcaagggatgaaggagttcatcgcggagg 1046
>dbj|AK102285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I06, full insert sequence Length = 2454 Score = 412 bits (208), Expect = e-112 Identities = 318/355 (89%) Strand = Plus / Plus Query: 56 ctcccgtcgctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctc 115 |||||| |||||||||||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 1047 ctcccggcgctgccgcggttcgggccgaagccccgttccaaggtgctggagatcgtgctc 1106 Query: 116 ccgatcgccaccgcggcgttcgtcctcgtgctggccatcgccttcttcatgttcgtgcgc 175 |||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||| || Sbjct: 1107 ccgatcgccaccgcggcgttcgtcctcgcgctggtcatcgccgccttcctgttcgtccgg 1166 Query: 176 acgcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgc 235 | |||| | |||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1167 aggcgggtgaggtacgccgaggtgcgggaggactgggaggtggagttcggaccgcaccgc 1226 Query: 236 ttcgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggc 295 ||| | ||||||||||| ||| |||| |||||||||||||||||| ||||||||| ||| Sbjct: 1227 ttctcctacaaggagctctaccaggcgacaaaggggttcaagaacaagcagctgctcggc 1286 Query: 296 accggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcg 355 |||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 1287 accggcggattcggcagggtgtacaagggcgtgctcgcgaaatccaacctcgagatcgcc 1346 Query: 356 gngaagcgggtgtcgcacgactccaagcagggcatgaaggagttcatcgccgagg 410 | |||| |||||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 1347 gtgaagagggtgtcgcacgactcgaagcaagggatgaaggagttcatcgcggagg 1401
>ref|NM_196700.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0046P18.9), mRNA Length = 3579 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 186 ggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtaca 245 ||||||| ||| | || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 2498 ggtacgccgagctccgggaggactgggaggtggagttcggcccgcaccggttcgcgtaca 2557 Query: 246 aggagctgt 254 |||| |||| Sbjct: 2558 aggacctgt 2566 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 2 ctcggctggagcttcgcgctcaacggcccggcgccgccgctcgac 46 ||||||||||||||||| | |||| || ||||||||||||||| Sbjct: 2314 ctcggctggagcttcgccatggacgggcccgcgccgccgctcgac 2358
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 186 ggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtaca 245 ||||||| ||| | || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 15361171 ggtacgccgagctccgggaggactgggaggtggagttcggcccgcaccggttcgcgtaca 15361230 Query: 246 aggagctgt 254 |||| |||| Sbjct: 15361231 aggacctgt 15361239 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 248 gagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcaccggcggcttc 307 ||||| |||| ||| || ||||||||||||||| | |||| || ||| ||||||| ||| Sbjct: 20246025 gagctctacatggcgacgaaggggttcaagaacagcgagctcctcggcgccggcggattc 20246084 Query: 308 ggcagggtgtacaagggcgtgctcc 332 ||| |||||||| ||||||||||| Sbjct: 20246085 ggcgaggtgtacaggggcgtgctcc 20246109 Score = 50.1 bits (25), Expect = 0.006 Identities = 121/153 (79%) Strand = Plus / Plus Query: 178 gcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgctt 237 |||| |||||||||| ||| ||||||| || |||||||| || || |||||||| || || Sbjct: 15364601 gcggctcaggtacgccgagctgcgcgaagattgggaggttgaatttgggccgcatcggtt 15364660 Query: 238 cgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcac 297 | | | ||| || || ||| | ||||| ||||||||| || || |||||| ||| | Sbjct: 15364661 ctcattcaaagatctttacgacgccaccggcgggttcaaggacaagcggctgctcggcgc 15364720 Query: 298 cggcggcttcggcagggtgtacaagggcgtgct 330 ||| || ||||| || ||||||||||||||||| Sbjct: 15364721 cggaggattcgggagagtgtacaagggcgtgct 15364753 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 2 ctcggctggagcttcgcgctcaacggcccggcgccgccgctcgac 46 ||||||||||||||||| | |||| || ||||||||||||||| Sbjct: 15360987 ctcggctggagcttcgccatggacgggcccgcgccgccgctcgac 15361031
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 186 ggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtaca 245 ||||||| ||| | || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 78534 ggtacgccgagctccgggaggactgggaggtggagttcggcccgcaccggttcgcgtaca 78593 Query: 246 aggagctgt 254 |||| |||| Sbjct: 78594 aggacctgt 78602 Score = 50.1 bits (25), Expect = 0.006 Identities = 121/153 (79%) Strand = Plus / Plus Query: 178 gcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgctt 237 |||| |||||||||| ||| ||||||| || |||||||| || || |||||||| || || Sbjct: 81964 gcggctcaggtacgccgagctgcgcgaagattgggaggttgaatttgggccgcatcggtt 82023 Query: 238 cgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcac 297 | | | ||| || || ||| | ||||| ||||||||| || || |||||| ||| | Sbjct: 82024 ctcattcaaagatctttacgacgccaccggcgggttcaaggacaagcggctgctcggcgc 82083 Query: 298 cggcggcttcggcagggtgtacaagggcgtgct 330 ||| || ||||| || ||||||||||||||||| Sbjct: 82084 cggaggattcgggagagtgtacaagggcgtgct 82116 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 2 ctcggctggagcttcgcgctcaacggcccggcgccgccgctcgac 46 ||||||||||||||||| | |||| || ||||||||||||||| Sbjct: 78350 ctcggctggagcttcgccatggacgggcccgcgccgccgctcgac 78394
>dbj|AK105860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H11, full insert sequence Length = 2262 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 186 ggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtaca 245 ||||||| ||| | || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1038 ggtacgccgagctccgggaggactgggaggtggagttcggcccgcaccggttcgcgtaca 1097 Query: 246 aggagctgt 254 |||| |||| Sbjct: 1098 aggacctgt 1106 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 2 ctcggctggagcttcgcgctcaacggcccggcgccgccgctcgac 46 ||||||||||||||||| | |||| || ||||||||||||||| Sbjct: 854 ctcggctggagcttcgccatggacgggcccgcgccgccgctcgac 898
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 186 ggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtaca 245 ||||||| ||| | || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 15369412 ggtacgccgagctccgggaggactgggaggtggagttcggcccgcaccggttcgcgtaca 15369471 Query: 246 aggagctgt 254 |||| |||| Sbjct: 15369472 aggacctgt 15369480 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 248 gagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcaccggcggcttc 307 ||||| |||| ||| || ||||||||||||||| | |||| || ||| ||||||| ||| Sbjct: 20257301 gagctctacatggcgacgaaggggttcaagaacagcgagctcctcggcgccggcggattc 20257360 Query: 308 ggcagggtgtacaagggcgtgctcc 332 ||| |||||||| ||||||||||| Sbjct: 20257361 ggcgaggtgtacaggggcgtgctcc 20257385 Score = 50.1 bits (25), Expect = 0.006 Identities = 121/153 (79%) Strand = Plus / Plus Query: 178 gcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgctt 237 |||| |||||||||| ||| ||||||| || |||||||| || || |||||||| || || Sbjct: 15372842 gcggctcaggtacgccgagctgcgcgaagattgggaggttgaatttgggccgcatcggtt 15372901 Query: 238 cgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcac 297 | | | ||| || || ||| | ||||| ||||||||| || || |||||| ||| | Sbjct: 15372902 ctcattcaaagatctttacgacgccaccggcgggttcaaggacaagcggctgctcggcgc 15372961 Query: 298 cggcggcttcggcagggtgtacaagggcgtgct 330 ||| || ||||| || ||||||||||||||||| Sbjct: 15372962 cggaggattcgggagagtgtacaagggcgtgct 15372994 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 2 ctcggctggagcttcgcgctcaacggcccggcgccgccgctcgac 46 ||||||||||||||||| | |||| || ||||||||||||||| Sbjct: 15369228 ctcggctggagcttcgccatggacgggcccgcgccgccgctcgac 15369272
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 189 acgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtacaagg 248 |||| ||||| || ||||||||||||||||||||||| |||||||| || |||||||||| Sbjct: 7966018 acgccgaggtccgggaggactgggaggtggagttcggcccgcaccggtttgcgtacaagg 7965959 Query: 249 a 249 | Sbjct: 7965958 a 7965958 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 240 cgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcaccg 299 ||||||||||||| |||||||| || |||||||||||| | | |||| || ||| ||| Sbjct: 5645385 cgtacaaggagctctacaaggcgaccaaggggttcaaggagagcgagctccttggcgccg 5645326 Query: 300 gcggcttcggcagggtgtacaagggcgtgctcc 332 ||||||||||| |||||||| |||||||||| Sbjct: 5645325 gcggcttcggccaggtgtacagaggcgtgctcc 5645293 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||||||||||| |||||||||||| ||||||| Sbjct: 7337597 ccggcggcttcggcaccgtgtacaagggcatgctccc 7337561 Score = 46.1 bits (23), Expect = 0.089 Identities = 50/59 (84%) Strand = Plus / Minus Query: 2 ctcggctggagcttcgcgctcaacggcccggcgccgccgctcgacacctcgaagctccc 60 ||||||||||||||||| | |||| |||||||||||||| ||| | |||||||||| Sbjct: 7966214 ctcggctggagcttcgccatggacggaccggcgccgccgctagactacgcgaagctccc 7966156
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 189 acgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtacaagg 248 |||| ||||| || ||||||||||||||||||||||| |||||||| || |||||||||| Sbjct: 73536 acgccgaggtccgggaggactgggaggtggagttcggcccgcaccggtttgcgtacaagg 73477 Query: 249 a 249 | Sbjct: 73476 a 73476 Score = 46.1 bits (23), Expect = 0.089 Identities = 50/59 (84%) Strand = Plus / Minus Query: 2 ctcggctggagcttcgcgctcaacggcccggcgccgccgctcgacacctcgaagctccc 60 ||||||||||||||||| | |||| |||||||||||||| ||| | |||||||||| Sbjct: 73732 ctcggctggagcttcgccatggacggaccggcgccgccgctagactacgcgaagctccc 73674
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 240 cgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcaccg 299 ||||||||||||| |||||||| || |||||||||||| | | |||| || ||| ||| Sbjct: 37532 cgtacaaggagctctacaaggcgaccaaggggttcaaggagagcgagctccttggcgccg 37473 Query: 300 gcggcttcggcagggtgtacaagggcgtgctcc 332 ||||||||||| |||||||| |||||||||| Sbjct: 37472 gcggcttcggccaggtgtacagaggcgtgctcc 37440
>ref|NM_197523.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0053C23.25), mRNA Length = 2025 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 248 gagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcaccggcggcttc 307 ||||| |||| ||| || ||||||||||||||| | |||| || ||| ||||||| ||| Sbjct: 1042 gagctctacatggcgacgaaggggttcaagaacagcgagctcctcggcgccggcggattc 1101 Query: 308 ggcagggtgtacaagggcgtgctcc 332 ||| |||||||| ||||||||||| Sbjct: 1102 ggcgaggtgtacaggggcgtgctcc 1126
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 248 gagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcaccggcggcttc 307 ||||| |||| ||| || ||||||||||||||| | |||| || ||| ||||||| ||| Sbjct: 123760 gagctctacatggcgacgaaggggttcaagaacagcgagctcctcggcgccggcggattc 123819 Query: 308 ggcagggtgtacaagggcgtgctcc 332 ||| |||||||| ||||||||||| Sbjct: 123820 ggcgaggtgtacaggggcgtgctcc 123844
>dbj|AK110453.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E10, full insert sequence Length = 2368 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 240 cgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcaccg 299 ||||||||||||| |||||||| || |||||||||||| | | |||| || ||| ||| Sbjct: 1154 cgtacaaggagctctacaaggcgaccaaggggttcaaggagagcgagctccttggcgccg 1213 Query: 300 gcggcttcggcagggtgtaca 320 ||||||||||| |||||||| Sbjct: 1214 gcggcttcggccaggtgtaca 1234
>ref|XM_478824.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2190 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 80 cccaagccacggtccaaggtgctggagatcgtgct 114 |||||||| ||||| |||||||||||||||||||| Sbjct: 920 cccaagccgcggtcgaaggtgctggagatcgtgct 954 Score = 40.1 bits (20), Expect = 5.5 Identities = 59/72 (81%) Strand = Plus / Plus Query: 178 gcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgctt 237 |||| |||||||||| ||| |||| ||||| |||||| | ||| ||||||||||| || Sbjct: 1018 gcggctcaggtacgccgagctgcgggaggagtgggagaccgcgtttgggccgcaccgatt 1077 Query: 238 cgcgtacaagga 249 | | |||||||| Sbjct: 1078 ctcctacaagga 1089
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 80 cccaagccacggtccaaggtgctggagatcgtgct 114 |||||||| ||||| |||||||||||||||||||| Sbjct: 23230452 cccaagccgcggtcgaaggtgctggagatcgtgct 23230418 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 209 tgggaggtggagttcgggccgcaccgcttcgcgtacaaggagctgtacaaggccacaaag 268 |||||||| ||||||||||| ||||| ||| | |||||||| |||| ||| |||||| | Sbjct: 1647151 tgggaggtcgagttcgggccacaccggttctcatacaaggatctgttcaatgccacagaa 1647092 Query: 269 gggttcaaga 278 || ||||||| Sbjct: 1647091 ggtttcaaga 1647082 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||||||||||| |||||||||||| ||||||| Sbjct: 2165176 ccggcggcttcggcaccgtgtacaagggcatgctccc 2165140 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Minus Query: 191 gcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtacaaggag 250 |||||||||||||| || |||||||| ||||| || ||||| || ||| | |||||||| Sbjct: 23236763 gcggaggtgcgcgaagattgggaggttgagtttggtccgcatcggttcacatacaaggat 23236704 Query: 251 ctgt 254 |||| Sbjct: 23236703 ctgt 23236700 Score = 44.1 bits (22), Expect = 0.35 Identities = 55/66 (83%) Strand = Plus / Minus Query: 64 gctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctcccgatcgc 123 |||||| || ||||| || ||||| ||||||||||| ||||| || ||||| ||| | || Sbjct: 23226481 gctgccacgcttcggtccgaagcctcggtccaaggtcctggacattgtgcttccgctggc 23226422 Query: 124 caccgc 129 |||||| Sbjct: 23226421 caccgc 23226416 Score = 40.1 bits (20), Expect = 5.5 Identities = 59/72 (81%) Strand = Plus / Minus Query: 178 gcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgctt 237 |||| |||||||||| ||| |||| ||||| |||||| | ||| ||||||||||| || Sbjct: 23230354 gcggctcaggtacgccgagctgcgggaggagtgggagaccgcgtttgggccgcaccgatt 23230295 Query: 238 cgcgtacaagga 249 | | |||||||| Sbjct: 23230294 ctcctacaagga 23230283
>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1562_B11 Length = 112144 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 80 cccaagccacggtccaaggtgctggagatcgtgct 114 |||||||| ||||| |||||||||||||||||||| Sbjct: 93366 cccaagccgcggtcgaaggtgctggagatcgtgct 93332 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Minus Query: 191 gcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtacaaggag 250 |||||||||||||| || |||||||| ||||| || ||||| || ||| | |||||||| Sbjct: 99677 gcggaggtgcgcgaagattgggaggttgagtttggtccgcatcggttcacatacaaggat 99618 Query: 251 ctgt 254 |||| Sbjct: 99617 ctgt 99614 Score = 44.1 bits (22), Expect = 0.35 Identities = 55/66 (83%) Strand = Plus / Minus Query: 64 gctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctcccgatcgc 123 |||||| || ||||| || ||||| ||||||||||| ||||| || ||||| ||| | || Sbjct: 89395 gctgccacgcttcggtccgaagcctcggtccaaggtcctggacattgtgcttccgctggc 89336 Query: 124 caccgc 129 |||||| Sbjct: 89335 caccgc 89330 Score = 40.1 bits (20), Expect = 5.5 Identities = 59/72 (81%) Strand = Plus / Minus Query: 178 gcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgctt 237 |||| |||||||||| ||| |||| ||||| |||||| | ||| ||||||||||| || Sbjct: 93268 gcggctcaggtacgccgagctgcgggaggagtgggagaccgcgtttgggccgcaccgatt 93209 Query: 238 cgcgtacaagga 249 | | |||||||| Sbjct: 93208 ctcctacaagga 93197
>dbj|AK105111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F11, full insert sequence Length = 2203 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 80 cccaagccacggtccaaggtgctggagatcgtgct 114 |||||||| ||||| |||||||||||||||||||| Sbjct: 933 cccaagccgcggtcgaaggtgctggagatcgtgct 967
>ref|XM_476518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2283 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Plus Query: 209 tgggaggtggagttcgggccgcaccgcttcgcgtacaaggagctgtacaaggccacaaag 268 |||||||| ||||||||||| ||||| ||| | |||||||| |||| ||| |||||| | Sbjct: 1246 tgggaggtcgagttcgggccacaccggttctcatacaaggatctgttcaatgccacagaa 1305 Query: 269 gggttcaaga 278 || ||||||| Sbjct: 1306 ggtttcaaga 1315
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0088O14 Length = 179483 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 209 tgggaggtggagttcgggccgcaccgcttcgcgtacaaggagctgtacaaggccacaaag 268 |||||||| ||||||||||| ||||| ||| | |||||||| |||| ||| |||||| | Sbjct: 115806 tgggaggtcgagttcgggccacaccggttctcatacaaggatctgttcaatgccacagaa 115747 Query: 269 gggttcaaga 278 || ||||||| Sbjct: 115746 ggtttcaaga 115737
>dbj|AK067638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109O13, full insert sequence Length = 2275 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Plus Query: 209 tgggaggtggagttcgggccgcaccgcttcgcgtacaaggagctgtacaaggccacaaag 268 |||||||| ||||||||||| ||||| ||| | |||||||| |||| ||| |||||| | Sbjct: 1068 tgggaggtcgagttcgggccacaccggttctcatacaaggatctgttcaatgccacagaa 1127 Query: 269 gggttcaaga 278 || ||||||| Sbjct: 1128 ggtttcaaga 1137
>dbj|AK066399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063L14, full insert sequence Length = 3210 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Plus Query: 209 tgggaggtggagttcgggccgcaccgcttcgcgtacaaggagctgtacaaggccacaaag 268 |||||||| ||||||||||| ||||| ||| | |||||||| |||| ||| |||||| | Sbjct: 1068 tgggaggtcgagttcgggccacaccggttctcatacaaggatctgttcaatgccacagaa 1127 Query: 269 gggttcaaga 278 || ||||||| Sbjct: 1128 ggtttcaaga 1137
>dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E09 Length = 69300 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 209 tgggaggtggagttcgggccgcaccgcttcgcgtacaaggagctgtacaaggccacaaag 268 |||||||| ||||||||||| ||||| ||| | |||||||| |||| ||| |||||| | Sbjct: 56304 tgggaggtcgagttcgggccacaccggttctcatacaaggatctgttcaatgccacagaa 56245 Query: 269 gggttcaaga 278 || ||||||| Sbjct: 56244 ggtttcaaga 56235
>ref|NM_196701.1| Oryza sativa (japonica cultivar-group) putative serine/threonine-specific kinase like protein (OSJNBa0046P18.10), mRNA Length = 2844 Score = 50.1 bits (25), Expect = 0.006 Identities = 121/153 (79%) Strand = Plus / Plus Query: 178 gcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgctt 237 |||| |||||||||| ||| ||||||| || |||||||| || || |||||||| || || Sbjct: 972 gcggctcaggtacgccgagctgcgcgaagattgggaggttgaatttgggccgcatcggtt 1031 Query: 238 cgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcac 297 | | | ||| || || ||| | ||||| ||||||||| || || |||||| ||| | Sbjct: 1032 ctcattcaaagatctttacgacgccaccggcgggttcaaggacaagcggctgctcggcgc 1091 Query: 298 cggcggcttcggcagggtgtacaagggcgtgct 330 ||| || ||||| || ||||||||||||||||| Sbjct: 1092 cggaggattcgggagagtgtacaagggcgtgct 1124
>ref|XM_476608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1704 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||||||||||| |||||||||||| ||||||| Sbjct: 540 ccggcggcttcggcaccgtgtacaagggcatgctccc 576
>gb|AF445779.1|AF445779 Triticum aestivum clone KSUK955 kinase R-like protein gene, partial sequence Length = 515 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 358 gaagcgggtgtcgcacgactccaagcagggcatgaaggagttcat 402 |||| ||||||| || || |||||||| ||||||||||||||||| Sbjct: 484 gaagagggtgtcacatgattccaagcaaggcatgaaggagttcat 440
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||||||||||| |||||||||||| ||||||| Sbjct: 44182 ccggcggcttcggcaccgtgtacaagggcatgctccc 44146
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||||||||||| |||||||||||| ||||||| Sbjct: 33078 ccggcggcttcggcaccgtgtacaagggcatgctccc 33042
>dbj|AK071359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J23, full insert sequence Length = 2374 Score = 50.1 bits (25), Expect = 0.006 Identities = 121/153 (79%) Strand = Plus / Plus Query: 178 gcggatcaggtacgcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgctt 237 |||| |||||||||| ||| ||||||| || |||||||| || || |||||||| || || Sbjct: 1093 gcggctcaggtacgccgagctgcgcgaagattgggaggttgaatttgggccgcatcggtt 1152 Query: 238 cgcgtacaaggagctgtacaaggccacaaaggggttcaagaaccggcagctgctgggcac 297 | | | ||| || || ||| | ||||| ||||||||| || || |||||| ||| | Sbjct: 1153 ctcattcaaagatctttacgacgccaccggcgggttcaaggacaagcggctgctcggcgc 1212 Query: 298 cggcggcttcggcagggtgtacaagggcgtgct 330 ||| || ||||| || ||||||||||||||||| Sbjct: 1213 cggaggattcgggagagtgtacaagggcgtgct 1245
>dbj|AK068992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G08, full insert sequence Length = 1707 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||||||||||| |||||||||||| ||||||| Sbjct: 541 ccggcggcttcggcaccgtgtacaagggcatgctccc 577
>ref|XM_478825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2079 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Plus Query: 191 gcggaggtgcgcgaggactgggaggtggagttcgggccgcaccgcttcgcgtacaaggag 250 |||||||||||||| || |||||||| ||||| || ||||| || ||| | |||||||| Sbjct: 1015 gcggaggtgcgcgaagattgggaggttgagtttggtccgcatcggttcacatacaaggat 1074 Query: 251 ctgt 254 |||| Sbjct: 1075 ctgt 1078
>ref|NM_185160.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2284 Score = 46.1 bits (23), Expect = 0.089 Identities = 67/82 (81%) Strand = Plus / Plus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcgg 356 |||||||||||||||| |||||| | |||||||| || | |||| | | ||| |||| | Sbjct: 1290 ccggcggcttcggcagcgtgtaccacggcgtgctgccgaggtccggcgtggaggtcgccg 1349 Query: 357 ngaagcgggtgtcgcacgactc 378 |||| ||||||||||||||| Sbjct: 1350 tgaagaaggtgtcgcacgactc 1371
>ref|NM_184965.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2121 Score = 46.1 bits (23), Expect = 0.089 Identities = 53/63 (84%) Strand = Plus / Plus Query: 81 ccaagccacggtccaaggtgctggagatcgtgctcccgatcgccaccgcggcgttcgtcc 140 ||||| ||||||||||||| |||| ||||| || || || || ||||||| |||||||| Sbjct: 953 ccaaggcacggtccaaggtattggatatcgttctgcccatagcaaccgcggtgttcgtcc 1012 Query: 141 tcg 143 ||| Sbjct: 1013 tcg 1015 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 206 gactgggaggtggagttcgggccgcaccgcttcgcgtacaagga 249 ||||||||||| || || ||||||||||| ||| | |||||||| Sbjct: 1078 gactgggaggttgaatttgggccgcaccgattcacatacaagga 1121
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.089 Identities = 67/82 (81%) Strand = Plus / Minus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcgg 356 |||||||||||||||| |||||| | |||||||| || | |||| | | ||| |||| | Sbjct: 34242832 ccggcggcttcggcagcgtgtaccacggcgtgctgccgaggtccggcgtggaggtcgccg 34242773 Query: 357 ngaagcgggtgtcgcacgactc 378 |||| ||||||||||||||| Sbjct: 34242772 tgaagaaggtgtcgcacgactc 34242751 Score = 46.1 bits (23), Expect = 0.089 Identities = 53/63 (84%) Strand = Plus / Plus Query: 81 ccaagccacggtccaaggtgctggagatcgtgctcccgatcgccaccgcggcgttcgtcc 140 ||||| ||||||||||||| |||| ||||| || || || || ||||||| |||||||| Sbjct: 31705396 ccaaggcacggtccaaggtattggatatcgttctgcccatagcaaccgcggtgttcgtcc 31705455 Query: 141 tcg 143 ||| Sbjct: 31705456 tcg 31705458 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 206 gactgggaggtggagttcgggccgcaccgcttcgcgtacaagga 249 ||||||||||| || || ||||||||||| ||| | |||||||| Sbjct: 31705521 gactgggaggttgaatttgggccgcaccgattcacatacaagga 31705564
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 46.1 bits (23), Expect = 0.089 Identities = 53/63 (84%) Strand = Plus / Plus Query: 81 ccaagccacggtccaaggtgctggagatcgtgctcccgatcgccaccgcggcgttcgtcc 140 ||||| ||||||||||||| |||| ||||| || || || || ||||||| |||||||| Sbjct: 30622 ccaaggcacggtccaaggtattggatatcgttctgcccatagcaaccgcggtgttcgtcc 30681 Query: 141 tcg 143 ||| Sbjct: 30682 tcg 30684 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 206 gactgggaggtggagttcgggccgcaccgcttcgcgtacaagga 249 ||||||||||| || || ||||||||||| ||| | |||||||| Sbjct: 30747 gactgggaggttgaatttgggccgcaccgattcacatacaagga 30790
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.089 Identities = 67/82 (81%) Strand = Plus / Minus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcgg 356 |||||||||||||||| |||||| | |||||||| || | |||| | | ||| |||| | Sbjct: 34333304 ccggcggcttcggcagcgtgtaccacggcgtgctgccgaggtccggcgtggaggtcgccg 34333245 Query: 357 ngaagcgggtgtcgcacgactc 378 |||| ||||||||||||||| Sbjct: 34333244 tgaagaaggtgtcgcacgactc 34333223 Score = 46.1 bits (23), Expect = 0.089 Identities = 53/63 (84%) Strand = Plus / Plus Query: 81 ccaagccacggtccaaggtgctggagatcgtgctcccgatcgccaccgcggcgttcgtcc 140 ||||| ||||||||||||| |||| ||||| || || || || ||||||| |||||||| Sbjct: 31795912 ccaaggcacggtccaaggtattggatatcgttctgcccatagcaaccgcggtgttcgtcc 31795971 Query: 141 tcg 143 ||| Sbjct: 31795972 tcg 31795974 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 206 gactgggaggtggagttcgggccgcaccgcttcgcgtacaagga 249 ||||||||||| || || ||||||||||| ||| | |||||||| Sbjct: 31796037 gactgggaggttgaatttgggccgcaccgattcacatacaagga 31796080
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 46.1 bits (23), Expect = 0.089 Identities = 67/82 (81%) Strand = Plus / Plus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctcccaaagtccaacctcgagatcgcgg 356 |||||||||||||||| |||||| | |||||||| || | |||| | | ||| |||| | Sbjct: 92166 ccggcggcttcggcagcgtgtaccacggcgtgctgccgaggtccggcgtggaggtcgccg 92225 Query: 357 ngaagcgggtgtcgcacgactc 378 |||| ||||||||||||||| Sbjct: 92226 tgaagaaggtgtcgcacgactc 92247
>dbj|AK120949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038D05, full insert sequence Length = 2125 Score = 46.1 bits (23), Expect = 0.089 Identities = 53/63 (84%) Strand = Plus / Plus Query: 81 ccaagccacggtccaaggtgctggagatcgtgctcccgatcgccaccgcggcgttcgtcc 140 ||||| ||||||||||||| |||| ||||| || || || || ||||||| |||||||| Sbjct: 846 ccaaggcacggtccaaggtattggatatcgttctgcccatagcaaccgcggtgttcgtcc 905 Query: 141 tcg 143 ||| Sbjct: 906 tcg 908 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 206 gactgggaggtggagttcgggccgcaccgcttcgcgtacaagga 249 ||||||||||| || || ||||||||||| ||| | |||||||| Sbjct: 971 gactgggaggttgaatttgggccgcaccgattcacatacaagga 1014
>ref|XM_478823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2183 Score = 44.1 bits (22), Expect = 0.35 Identities = 55/66 (83%) Strand = Plus / Plus Query: 64 gctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctcccgatcgc 123 |||||| || ||||| || ||||| ||||||||||| ||||| || ||||| ||| | || Sbjct: 909 gctgccacgcttcggtccgaagcctcggtccaaggtcctggacattgtgcttccgctggc 968 Query: 124 caccgc 129 |||||| Sbjct: 969 caccgc 974
>ref|XM_473280.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2022 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 79 ccccaagccacggtccaaggtgctggagatcgtgctcccgat 120 ||||||||| ||||||||| ||| ||||||||||| ||||| Sbjct: 861 ccccaagccgcggtccaagacgcttgagatcgtgctgccgat 902
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 298 cggcggcttcggcagggtgtacaagggcgtgctc 331 |||||||| |||| ||||||||||||||||||| Sbjct: 62746 cggcggctccggcgtggtgtacaagggcgtgctc 62713
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 gctgctgggcaccggcggcttc 307 |||||||||||||||||||||| Sbjct: 4036692 gctgctgggcaccggcggcttc 4036713 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tggccatcgccttcttcatg 166 |||||||||||||||||||| Sbjct: 6575215 tggccatcgccttcttcatg 6575234
>gb|AY117054.1| Sus scrofa epidermal growth factor receptor mRNA, complete cds Length = 5038 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggcagggtgtacaagggc 325 |||||||| |||||| ||||||| ||||||||||||| Sbjct: 2276 tgctgggctccggcgcgttcggcacggtgtacaagggc 2313
>ref|NM_214007.1| Sus scrofa epidermal growth factor receptor (EGFR), mRNA Length = 5038 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggcagggtgtacaagggc 325 |||||||| |||||| ||||||| ||||||||||||| Sbjct: 2276 tgctgggctccggcgcgttcggcacggtgtacaagggc 2313
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 298 cggcggcttcggcagggtgtacaagggcgtgctc 331 |||||||| |||| ||||||||||||||||||| Sbjct: 1548210 cggcggctccggcgtggtgtacaagggcgtgctc 1548177
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 48 cctcgaagctcccgtcgctgccgcggttcggccc 81 ||||||||| ||||||| ||||||||||||||| Sbjct: 1358352 cctcgaagcggccgtcgccgccgcggttcggccc 1358319
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 44.1 bits (22), Expect = 0.35 Identities = 55/66 (83%) Strand = Plus / Minus Query: 64 gctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctcccgatcgc 123 |||||| || ||||| || ||||| ||||||||||| ||||| || ||||| ||| | || Sbjct: 170665 gctgccacgcttcggtccgaagcctcggtccaaggtcctggacattgtgcttccgctggc 170606 Query: 124 caccgc 129 |||||| Sbjct: 170605 caccgc 170600
>dbj|AK110940.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-G10, full insert sequence Length = 1488 Score = 44.1 bits (22), Expect = 0.35 Identities = 55/66 (83%) Strand = Plus / Plus Query: 64 gctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctcccgatcgc 123 |||||| || ||||| || ||||| ||||||||||| ||||| || ||||| ||| | || Sbjct: 1044 gctgccacgcttcggtccgaagcctcggtccaaggtcctggacattgtgcttccgctggc 1103 Query: 124 caccgc 129 |||||| Sbjct: 1104 caccgc 1109
>dbj|AK105289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-F02, full insert sequence Length = 2156 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 79 ccccaagccacggtccaaggtgctggagatcgtgctcccgat 120 ||||||||| ||||||||| ||| ||||||||||| ||||| Sbjct: 821 ccccaagccgcggtccaagacgcttgagatcgtgctgccgat 862
>dbj|AK101924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071P06, full insert sequence Length = 2181 Score = 44.1 bits (22), Expect = 0.35 Identities = 55/66 (83%) Strand = Plus / Plus Query: 64 gctgccgcggttcggccccaagccacggtccaaggtgctggagatcgtgctcccgatcgc 123 |||||| || ||||| || ||||| ||||||||||| ||||| || ||||| ||| | || Sbjct: 907 gctgccacgcttcggtccgaagcctcggtccaaggtcctggacattgtgcttccgctggc 966 Query: 124 caccgc 129 |||||| Sbjct: 967 caccgc 972
>dbj|AK068045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135M14, full insert sequence Length = 2658 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 209 tgggaggtggagttcgggccgcaccgcttcgcgtacaaggagctgt 254 |||||||| ||||||||||| ||||| ||| | |||||||| |||| Sbjct: 1536 tgggaggtcgagttcgggccacaccggttctcatacaaggatctgt 1491
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 298 cggcggcttcggcagggtgtacaagggcgtgctc 331 |||||||| |||| ||||||||||||||||||| Sbjct: 1545931 cggcggctccggcgtggtgtacaagggcgtgctc 1545898
>ref|XM_507979.1| PREDICTED: Pan troglodytes conserved helix-loop-helix ubiquitous kinase (LOC450673), mRNA Length = 2715 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 60 gctgggcaccggcggcttcgg 80
>ref|XM_466984.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 382 gcagggcatgaaggagttcatcgccgagg 410 |||||| |||||||||||||| ||||||| Sbjct: 1197 gcagggaatgaaggagttcattgccgagg 1225
>ref|NM_193944.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1923 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 305 ttcggcagggtgtacaagggcgtgctccc 333 ||||||| |||||||||||||||||||| Sbjct: 946 ttcggcaatgtgtacaagggcgtgctccc 974
>ref|NM_189391.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 735 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||| ||||||| |||||||||||| ||||||| Sbjct: 461 ccggcggtttcggcaccgtgtacaagggcatgctccc 497
>ref|NM_174021.2| Bos taurus conserved helix-loop-helix ubiquitous kinase (CHUK), mRNA Length = 3442 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 106 gctgggcaccggcggcttcgg 126
>ref|XM_863907.1| PREDICTED: Bos taurus similar to Inhibitor of nuclear factor kappa-B kinase alpha subunit (I kappa-B kinase alpha) (IkBKA) (IKK-alpha) (IKK-A) (IkappaB kinase) (I-kappa-B kinase 1) (IKK1) (Conserved helix-loop-helix ubiquitous kinase) (Nuclear factor NFkappaB inhibitor ... (LOC613300), mRNA Length = 1722 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 162 gctgggcaccggcggcttcgg 182
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 tcaggtacgcggaggtgcgcg 203 ||||||||||||||||||||| Sbjct: 1711210 tcaggtacgcggaggtgcgcg 1711230
>gb|AY652653.1| Homo sapiens conserved helix-loop-helix ubiquitous kinase (CHUK) gene, complete cds Length = 45185 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 2146 gctgggcaccggcggcttcgg 2166
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aaccggcagctgctgggcacc 298 ||||||||||||||||||||| Sbjct: 37105 aaccggcagctgctgggcacc 37125
>emb|AL138921.14| Human DNA sequence from clone RP11-316M21 on chromosome 10 Contains the 3' end of gene FLJ30135, the CHUK gene for conserved helix-loop ubiquitous kinase, a novel gene (FLJ32012), a novel gene containing FLJ10998, FLJ40576, FLJ3922, FLJ30751, a prohibitin (PHB) pseudogene, a tropomyosin (TPM4) pseudogene and three CpG islands, complete sequence Length = 194916 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 143575 gctgggcaccggcggcttcgg 143555
>emb|AJ414555.1|BTA414555 Bos taurus mRNA for IkB kinase-alpha (bIKKalpha gene) Length = 3442 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 106 gctgggcaccggcggcttcgg 126
>emb|CR861245.1| Pongo pygmaeus mRNA; cDNA DKFZp459O053 (from clone DKFZp459O053) Length = 1865 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 101 gctgggcaccggcggcttcgg 121
>ref|NM_008154.2| Mus musculus G-protein coupled receptor 3 (Gpr3), mRNA Length = 2131 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctggccatcgccttcttcatg 166 ||||||||||||||||||||| Sbjct: 686 ctggccatcgccttcttcatg 706
>ref|NM_001278.3| Homo sapiens conserved helix-loop-helix ubiquitous kinase (CHUK), mRNA Length = 3539 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 115 gctgggcaccggcggcttcgg 135
>dbj|AK140464.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830043I03 product:G-protein coupled receptor 3, full insert sequence Length = 2071 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctggccatcgccttcttcatg 166 ||||||||||||||||||||| Sbjct: 669 ctggccatcgccttcttcatg 689
>dbj|AK140302.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230399B16 product:G-protein coupled receptor 3, full insert sequence Length = 2113 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctggccatcgccttcttcatg 166 ||||||||||||||||||||| Sbjct: 686 ctggccatcgccttcttcatg 706
>dbj|AK158917.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530006I19 product:G-protein coupled receptor 3, full insert sequence Length = 2105 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctggccatcgccttcttcatg 166 ||||||||||||||||||||| Sbjct: 678 ctggccatcgccttcttcatg 698
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 245 aaggagctgtacaaggccacaaagg 269 |||||||||||||| |||||||||| Sbjct: 153335 aaggagctgtacaacgccacaaagg 153359
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 298 cggcggcttcggcagggtgtacaagggcgtgct 330 |||||||| |||| |||||||||||||||||| Sbjct: 1491195 cggcggctccggcgtggtgtacaagggcgtgct 1491163
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 382 gcagggcatgaaggagttcatcgccgagg 410 |||||| |||||||||||||| ||||||| Sbjct: 25743379 gcagggaatgaaggagttcattgccgagg 25743351
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||| ||||||| |||||||||||| ||||||| Sbjct: 42552037 ccggcggtttcggcaccgtgtacaagggcatgctccc 42552073 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 305 ttcggcagggtgtacaagggcgtgctccc 333 ||||||| |||||||||||||||||||| Sbjct: 16069674 ttcggcaatgtgtacaagggcgtgctccc 16069702
>gb|BC092514.1| Homo sapiens conserved helix-loop-helix ubiquitous kinase, mRNA (cDNA clone MGC:104955 IMAGE:3063613), complete cds Length = 3508 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 76 gctgggcaccggcggcttcgg 96
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 297 ccggcggcttcggcagggtgtacaagggcgtgctccc 333 ||||||| ||||||| |||||||||||| ||||||| Sbjct: 72920 ccggcggtttcggcaccgtgtacaagggcatgctccc 72956
>dbj|AP003854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0093M23 Length = 134578 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 305 ttcggcagggtgtacaagggcgtgctccc 333 ||||||| |||||||||||||||||||| Sbjct: 25837 ttcggcaatgtgtacaagggcgtgctccc 25865
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 382 gcagggcatgaaggagttcatcgccgagg 410 |||||| |||||||||||||| ||||||| Sbjct: 146055 gcagggaatgaaggagttcattgccgagg 146027
>emb|AJ130845.1|CCO130845 Coturnix coturnix mRNA for pim-3 protein Length = 1534 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 tgggcaccggcggcttcggcagggtgtac 319 |||||| |||||||||||||| ||||||| Sbjct: 239 tgggcagcggcggcttcggcacggtgtac 267
>dbj|AK107491.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D02, full insert sequence Length = 2127 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 382 gcagggcatgaaggagttcatcgccgagg 410 |||||| |||||||||||||| ||||||| Sbjct: 1197 gcagggaatgaaggagttcattgccgagg 1225
>ref|NM_209139.1| Eremothecium gossypii ADL310Wp (ADL310W), mRNA Length = 285 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 245 aaggagctgtacaaggccacaaagg 269 |||||||||||||| |||||||||| Sbjct: 253 aaggagctgtacaacgccacaaagg 277
>gb|AF080157.1|AF080157 Homo sapiens IkB kinase-a (IKK-alpha) mRNA, complete cds Length = 3579 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 155 gctgggcaccggcggcttcgg 175
>dbj|D21062.1|MUSGPCR21 Mus musculus GPCR21 mRNA for G protein-coupled receptor, complete cds Length = 2492 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctggccatcgccttcttcatg 166 ||||||||||||||||||||| Sbjct: 1090 ctggccatcgccttcttcatg 1110
>gb|AF009225.1|AF009225 Homo sapiens IkB kinase alpha subunit (IKK alpha) mRNA, complete cds Length = 2273 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 95 gctgggcaccggcggcttcgg 115
>gb|AF012890.1|AF012890 Homo sapiens IKK-a kinase (IKK-a) mRNA, complete cds Length = 2238 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 60 gctgggcaccggcggcttcgg 80
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 298 cggcggcttcggcagggtgtacaagggcgtgct 330 |||||||| |||| |||||||||||||||||| Sbjct: 1491195 cggcggctccggcgtggtgtacaagggcgtgct 1491163
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 298 cggcggcttcggcagggtgtacaagggcgtgct 330 |||||||| |||| |||||||||||||||||| Sbjct: 134537 cggcggctccggcgtggtgtacaagggcgtgct 134569
>dbj|AB209028.1| Homo sapiens mRNA for conserved helix-loop-helix ubiquitous kinase variant protein Length = 5829 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gctgggcaccggcggcttcgg 309 ||||||||||||||||||||| Sbjct: 92 gctgggcaccggcggcttcgg 112
>emb|AL671858.6| Mouse DNA sequence from clone RP23-341B14 on chromosome 4, complete sequence Length = 121969 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ctggccatcgccttcttcatg 166 ||||||||||||||||||||| Sbjct: 99807 ctggccatcgccttcttcatg 99787
>ref|XM_475551.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 ggcttcggcagggtgtacaagggc 325 |||||||||||||| ||||||||| Sbjct: 298 ggcttcggcagggtctacaagggc 321
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tgggcaccggcggcttcggc 310 |||||||||||||||||||| Sbjct: 426909 tgggcaccggcggcttcggc 426890
>ref|XM_603267.2| PREDICTED: Bos taurus similar to PR domain containing 11 (LOC524928), mRNA Length = 4067 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gcggaggtgcgcgaggactg 210 |||||||||||||||||||| Sbjct: 2075 gcggaggtgcgcgaggactg 2056
>gb|BC017621.1| Mus musculus proviral integration site 3, mRNA (cDNA clone MGC:27707 IMAGE:4924687), complete cds Length = 2447 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 608 tgctgggcagcggcggcttcggca 631
>gb|BC026639.1| Mus musculus proviral integration site 3, mRNA (cDNA clone MGC:37517 IMAGE:4985551), complete cds Length = 2132 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 297 tgctgggcagcggcggcttcggca 320
>ref|XM_954133.1| Neurospora crassa OR74A hypothetical protein (NCU06879.1) partial mRNA Length = 393 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 ctcccaaagtccaacctcgagatc 352 ||||| |||||||||||||||||| Sbjct: 238 ctccccaagtccaacctcgagatc 261
>ref|XM_327164.1| Neurospora crassa OR74A hypothetical protein (NCU06879.1) partial mRNA Length = 393 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 ctcccaaagtccaacctcgagatc 352 ||||| |||||||||||||||||| Sbjct: 238 ctccccaagtccaacctcgagatc 261
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 ggcttcggcagggtgtacaagggc 325 |||||||||||||| ||||||||| Sbjct: 63509 ggcttcggcagggtctacaagggc 63532
>ref|NM_145478.1| Mus musculus proviral integration site 3 (Pim3), mRNA Length = 2447 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 608 tgctgggcagcggcggcttcggca 631
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tgctcccgatcgccaccgcg 130 |||||||||||||||||||| Sbjct: 1260610 tgctcccgatcgccaccgcg 1260629
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gctgggcaccggcggcttcggcag 312 |||||||||||||||| ||||||| Sbjct: 4411651 gctgggcaccggcggcatcggcag 4411628
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gtgcgcgaggactgggaggtggag 220 |||||||||||||||||| ||||| Sbjct: 4071695 gtgcgcgaggactgggagctggag 4071672
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gctgctgggcaccggcggct 305 |||||||||||||||||||| Sbjct: 512901 gctgctgggcaccggcggct 512882
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tgggcaccggcggcttcggc 310 |||||||||||||||||||| Sbjct: 84839 tgggcaccggcggcttcggc 84820
>emb|BX294141.1| Pirellula sp. strain 1 complete genome; segment 9/24 Length = 299350 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ggcaccggcggcttcggcag 312 |||||||||||||||||||| Sbjct: 273546 ggcaccggcggcttcggcag 273565
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tgggcaccggcggcttcggc 310 |||||||||||||||||||| Sbjct: 84778 tgggcaccggcggcttcggc 84759
>emb|AJ720520.1| Gallus gallus mRNA for hypothetical protein, clone 19h23 Length = 2765 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ctgggcaccggcggcttcgg 309 |||||||||||||||||||| Sbjct: 127 ctgggcaccggcggcttcgg 146
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ggtgcgcgaggactgggaggtgga 219 ||||||||||||||||||| |||| Sbjct: 895195 ggtgcgcgaggactgggagctgga 895172
>gb|AE012020.1| Xanthomonas axonopodis pv. citri str. 306, section 398 of 469 of the complete genome Length = 10044 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gctgggcaccggcggcttcggcag 312 |||||||||||||||| ||||||| Sbjct: 8406 gctgggcaccggcggcatcggcag 8383
>dbj|AK149478.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730023H09 product:Serine/threonine-protein kinase pim-3 (EC 2.7.1.37), full insert sequence Length = 2133 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 328 tgctgggcagcggcggcttcggca 351
>gb|AF445786.1|AF445786 Triticum aestivum clone KSUK962 kinase R-like protein gene, partial cds Length = 495 Score = 40.1 bits (20), Expect = 5.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 363 gggtgtcgcacgactccaagcagggcatgaaggagttcatcgccgagg 410 ||||||| || || || ||||| || || ||||||||||||||||||| Sbjct: 493 gggtgtcccatgagtcaaagcaaggaataaaggagttcatcgccgagg 446
>dbj|AK159670.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420027M08 product:Serine/threonine-protein kinase pim-3 (EC 2.7.1.37), full insert sequence Length = 2113 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 304 tgctgggcagcggcggcttcggca 327
>dbj|AK168014.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730047D14 product:Serine/threonine-protein kinase pim-3 (EC 2.7.1.37), full insert sequence Length = 2420 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 617 tgctgggcagcggcggcttcggca 640
>dbj|AK079623.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330080E07 product:Serine/threonine-protein kinase pim-3 (EC 2.7.1.37), full insert sequence Length = 2136 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 328 tgctgggcagcggcggcttcggca 351
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 ggcttcggcagggtgtacaagggc 325 |||||||||||||| ||||||||| Sbjct: 1401847 ggcttcggcagggtctacaagggc 1401870
>gb|AY026239.1| Mus musculus KID1 (Kid1) mRNA, complete cds Length = 2156 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 356 tgctgggcagcggcggcttcggca 379
>ref|NM_001012904.1| Gallus gallus conserved helix-loop-helix ubiquitous kinase (CHUK), mRNA Length = 2765 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ctgggcaccggcggcttcgg 309 |||||||||||||||||||| Sbjct: 127 ctgggcaccggcggcttcgg 146
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tggccatcgccttcttcatg 166 |||||||||||||||||||| Sbjct: 5316816 tggccatcgccttcttcatg 5316835
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gctgctgggcaccggcggct 305 |||||||||||||||||||| Sbjct: 526604 gctgctgggcaccggcggct 526585
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tggccatcgccttcttcatg 166 |||||||||||||||||||| Sbjct: 5640388 tggccatcgccttcttcatg 5640407
>gb|AC117700.22| Mus musculus chromosome 15, clone RP23-455J20, complete sequence Length = 187994 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tgctgggcaccggcggcttcggca 311 ||||||||| |||||||||||||| Sbjct: 40976 tgctgggcagcggcggcttcggca 40953
>gb|AF018955.1|AF018955 Ectothiorhodospira shaposhnikovii chlorin reductase subunit (bchZ) gene, partial cds; ORFQ' pseudogene, complete sequence; and B880 antenna beta-subunit (pufB), B880 antenna alpha-subunit (pufA), reaction center L subunit (pufL), reaction center M subunit (pufM), and reaction center four-heme cytochrome subunit (pufC) genes, complete cds Length = 4440 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 tgctggccatcgccttcttc 163 |||||||||||||||||||| Sbjct: 1832 tgctggccatcgccttcttc 1851
>dbj|AP006659.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L15, TM0344, complete sequence Length = 87645 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 242 tacaaggagctgtacaaggccacaaaggggttcaag 277 ||||||||||| ||||| | ||||||||||||||| Sbjct: 66480 tacaaggagctccacaagtcaacaaaggggttcaag 66515 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,701,370 Number of Sequences: 3902068 Number of extensions: 2701370 Number of successful extensions: 55781 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53885 Number of HSP's gapped (non-prelim): 1889 length of query: 410 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 388 effective length of database: 17,147,199,772 effective search space: 6653113511536 effective search space used: 6653113511536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
