ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet95h09 |
|---|---|
| Clone Library Name | barley_pub |
>XTH32_ARATH (Q9SJL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 32 precursor (EC 2.4.1.207) (At-XTH32) (XTH-32) Length = 299 Score = 102 bits (255), Expect = 3e-22 Identities = 52/106 (49%), Positives = 67/106 (63%) Frame = +1 Query: 106 AISHLMVIVVGAVILLQGEAQPSPGYYPSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALT 285 +I HL+V+ +V PSPGY+PSSKV S F + + LWGPQHQ + DQ ALT Sbjct: 10 SIFHLLVLWGSSV---NAYWPPSPGYWPSSKVGSLNFYKGFRNLWGPQHQRM--DQNALT 64 Query: 286 LWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTAGVNTXFYLSNNE 423 +W+D +R+GYFG ++K+QPGYTAGV T YLSNNE Sbjct: 65 IWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNE 110
>XTH31_ARATH (P93046) Probable xyloglucan endotransglucosylase/hydrolase protein| 31 precursor (EC 2.4.1.207) (At-XTH31) (XTH-31) (AtXTR8) Length = 293 Score = 101 bits (251), Expect = 8e-22 Identities = 45/88 (51%), Positives = 60/88 (68%) Frame = +1 Query: 160 EAQPSPGYYPSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYR 339 + PSPGYYPSS+V ++PF + + TLWG QHQ +Q +TLW+D YR Sbjct: 21 QRSPSPGYYPSSRVPTSPFDREFRTLWGSQHQRR--EQDVVTLWLDKSTGSGFKSLRPYR 78 Query: 340 NGYFGVSMKVQPGYTAGVNTXFYLSNNE 423 +GYFG S+K+QPG+TAGV+T YLSNN+ Sbjct: 79 SGYFGASIKLQPGFTAGVDTSLYLSNNQ 106
>XTH27_ARATH (Q8LDS2) Probable xyloglucan endotransglucosylase/hydrolase protein| 27 precursor (EC 2.4.1.207) (At-XTH27) (XTH-27) Length = 333 Score = 45.8 bits (107), Expect = 4e-05 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = +1 Query: 208 TPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTA 387 T F + Y+ L+G ++ + D ++ L +D Y +G+F S+K+ YTA Sbjct: 29 TSFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTA 88 Query: 388 GVNTXFYLSNNE 423 GV FY+SN + Sbjct: 89 GVVVAFYMSNGD 100
>XTH_BRAOB (Q6YDN9) Xyloglucan endotransglucosylase/hydrolase precursor (EC| 2.4.1.207) (BobXET16A) Length = 295 Score = 45.4 bits (106), Expect = 5e-05 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Frame = +1 Query: 187 PSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMK 366 P K PF + Y W HQ + L L +D Y G+F + +K Sbjct: 25 PPRKAIDVPFGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIK 84 Query: 367 VQPGYTAGVNTXFYLS--NNE 423 + G TAGV T FYLS NNE Sbjct: 85 LPAGDTAGVVTAFYLSSTNNE 105
>XTH4_ARATH (Q39099) Xyloglucan endotransglucosylase/hydrolase protein 4| precursor (EC 2.4.1.207) (At-XTH4) (XTH-4) Length = 296 Score = 45.4 bits (106), Expect = 5e-05 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Frame = +1 Query: 187 PSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMK 366 P K PF + Y W HQ + L L +D Y G+F + +K Sbjct: 26 PPRKAIDVPFGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIK 85 Query: 367 VQPGYTAGVNTXFYLS--NNE 423 + G TAGV T FYLS NNE Sbjct: 86 LPAGDTAGVVTAFYLSSTNNE 106
>XTH28_ARATH (Q38909) Probable xyloglucan endotransglucosylase/hydrolase protein| 28 precursor (EC 2.4.1.207) (At-XTH28) (XTH-28) Length = 332 Score = 44.3 bits (103), Expect = 1e-04 Identities = 23/76 (30%), Positives = 38/76 (50%) Frame = +1 Query: 196 KVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQP 375 K+ F + Y+ L+G Q+ + D ++ L +D Y +G+F S+K+ Sbjct: 25 KLPLIQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPA 84 Query: 376 GYTAGVNTXFYLSNNE 423 Y+AGV FYLSN + Sbjct: 85 DYSAGVVIAFYLSNGD 100
>XTH30_ARATH (Q38908) Probable xyloglucan endotransglucosylase/hydrolase protein| 30 precursor (EC 2.4.1.207) (At-XTH30) (XTH-30) Length = 343 Score = 43.5 bits (101), Expect = 2e-04 Identities = 21/77 (27%), Positives = 38/77 (49%) Frame = +1 Query: 193 SKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQ 372 + +++ F + S L+G + SPD ++ L +D Y++G++ +K+ Sbjct: 25 TNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLP 84 Query: 373 PGYTAGVNTXFYLSNNE 423 YTAGV FY SN + Sbjct: 85 ADYTAGVVVAFYTSNGD 101
>XTH29_ARATH (Q8L7H3) Probable xyloglucan endotransglucosylase/hydrolase protein| 29 precursor (EC 2.4.1.207) (At-XTH29) (XTH-29) Length = 357 Score = 43.1 bits (100), Expect = 3e-04 Identities = 21/70 (30%), Positives = 34/70 (48%) Frame = +1 Query: 214 FSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTAGV 393 F + S L+G + SPD ++ L +D Y++G+F +K+ YTAG+ Sbjct: 40 FDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGI 99 Query: 394 NTXFYLSNNE 423 FY SN + Sbjct: 100 VVAFYTSNGD 109
>XTH3_ARATH (Q9LJR7) Probable xyloglucan endotransglucosylase/hydrolase protein| 3 precursor (EC 2.4.1.207) (At-XTH3) (XTH-3) Length = 290 Score = 42.7 bits (99), Expect = 4e-04 Identities = 22/68 (32%), Positives = 30/68 (44%) Frame = +1 Query: 214 FSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTAGV 393 F Q Y WG H S + L+MD Y +G F + +KV G T G+ Sbjct: 35 FGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGI 94 Query: 394 NTXFYLSN 417 T FYL++ Sbjct: 95 VTAFYLTS 102
>XTH1_LYCES (Q40144) Probable xyloglucan endotransglucosylase/hydrolase 1| precursor (EC 2.4.1.207) (LeXTH1) Length = 296 Score = 41.6 bits (96), Expect = 8e-04 Identities = 25/79 (31%), Positives = 33/79 (41%) Frame = +1 Query: 184 YPSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSM 363 YP V PF + Y W H T L +D Y G+F + M Sbjct: 24 YPRRPVD-VPFWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKM 82 Query: 364 KVQPGYTAGVNTXFYLSNN 420 ++ G +AGV T FYLS+N Sbjct: 83 RLVGGDSAGVVTAFYLSSN 101
>XTH_TOBAC (P93349) Probable xyloglucan endotransglucosylase/hydrolase protein| precursor (EC 2.4.1.207) Length = 295 Score = 41.2 bits (95), Expect = 0.001 Identities = 24/79 (30%), Positives = 34/79 (43%) Frame = +1 Query: 184 YPSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSM 363 YP V PF + Y W H + + L +D Y G+F + + Sbjct: 23 YPRKPVD-VPFWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKL 81 Query: 364 KVQPGYTAGVNTXFYLSNN 420 K+ G +AGV T FYLS+N Sbjct: 82 KLVGGDSAGVVTAFYLSSN 100
>XTH8_ARATH (Q8L9A9) Probable xyloglucan endotransglucosylase/hydrolase protein| 8 precursor (EC 2.4.1.207) (At-XTH8) (XTH-8) Length = 292 Score = 40.8 bits (94), Expect = 0.001 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = +1 Query: 190 SSKVSSTP---FSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVS 360 SS +++TP F ++ +W H + S D L +D YR G+F + Sbjct: 14 SSSIAATPTQSFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMK 73 Query: 361 MKVQPGYTAGVNTXFYL 411 +K+ G +AGV T +Y+ Sbjct: 74 LKLVGGDSAGVVTAYYM 90
>XTH11_ARATH (Q9SMP1) Probable xyloglucan endotransglucosylase/hydrolase protein| 11 precursor (EC 2.4.1.207) (At-XTH11) (XTH-11) Length = 267 Score = 38.9 bits (89), Expect = 0.005 Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 4/102 (3%) Frame = +1 Query: 118 LMVIVVGAVILLQGEAQPSPGYYPSSKVSSTPFSQW---YSTLWGPQHQSLSPDQTA-LT 285 ++++VV V QG+ + +T F W Y WG HQ+L ++T+ L Sbjct: 1 MVMVVVAVVAAAQGQEE------------TTGFVTWGNNYYQTWG--HQALVINKTSELQ 46 Query: 286 LWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTAGVNTXFYL 411 L +D Y +GYF V +K + GV T FYL Sbjct: 47 LTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYL 88
>XTH_WHEAT (Q41542) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) Length = 293 Score = 37.4 bits (85), Expect = 0.015 Identities = 28/104 (26%), Positives = 41/104 (39%) Frame = +1 Query: 106 AISHLMVIVVGAVILLQGEAQPSPGYYPSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALT 285 A + ++ VV AV+L A P K PF + Y W H + Sbjct: 3 ATAGALLAVVAAVLLRGVAAAPR-------KPVDVPFDKNYVPTWAQDHIHYVNGGREVQ 55 Query: 286 LWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTAGVNTXFYLSN 417 L +D Y G+F + +K+ G +AG T FYLS+ Sbjct: 56 LSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSS 99
>XTHA_PHAAN (Q41638) Xyloglucan endotransglucosylase/hydrolase protein A| precursor (EC 2.4.1.207) (VaXTH1) Length = 292 Score = 37.4 bits (85), Expect = 0.015 Identities = 20/69 (28%), Positives = 30/69 (43%) Frame = +1 Query: 211 PFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTAG 390 PF + Y W H + + L +D Y G+F + +K+ PG +AG Sbjct: 30 PFGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAG 89 Query: 391 VNTXFYLSN 417 T FYLS+ Sbjct: 90 TVTAFYLSS 98
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 36.6 bits (83), Expect = 0.025 Identities = 21/77 (27%), Positives = 32/77 (41%) Frame = +1 Query: 187 PSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMK 366 P K + PF + Y W H + + L +D Y G+F + +K Sbjct: 23 PPKKSINVPFGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIK 82 Query: 367 VQPGYTAGVNTXFYLSN 417 + G +AG T FYLS+ Sbjct: 83 MVAGDSAGTVTAFYLSS 99
>XTH1_ARATH (Q9SV61) Putative xyloglucan endotransglucosylase/hydrolase protein| 1 precursor (EC 2.4.1.207) (At-XTH1) (XTH-1) Length = 295 Score = 36.6 bits (83), Expect = 0.025 Identities = 20/72 (27%), Positives = 30/72 (41%) Frame = +1 Query: 202 SSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGY 381 S F Y WG + + L +D Y +G+F + +KV P Sbjct: 35 SKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKD 94 Query: 382 TAGVNTXFYLSN 417 T+GV T FYL++ Sbjct: 95 TSGVVTAFYLTS 106
>XTH10_ARATH (Q9ZVK1) Probable xyloglucan endotransglucosylase/hydrolase protein| 10 precursor (EC 2.4.1.207) (At-XTH10) (XTH-10) Length = 299 Score = 36.6 bits (83), Expect = 0.025 Identities = 19/78 (24%), Positives = 36/78 (46%) Frame = +1 Query: 190 SSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKV 369 +S VSS F++ + W P H + S D + TL +D + G + +K+ Sbjct: 29 ASVVSSGDFNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKL 88 Query: 370 QPGYTAGVNTXFYLSNNE 423 G + G +Y+S+++ Sbjct: 89 IRGSSQGTVVAYYMSSDQ 106
>XTH2_ARATH (Q9SV60) Putative xyloglucan endotransglucosylase/hydrolase protein| 2 precursor (EC 2.4.1.207) (At-XTH2) (XTH-2) Length = 292 Score = 35.8 bits (81), Expect = 0.043 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +1 Query: 226 YSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTAGVNTXF 405 Y WG H + L MD Y +G+F + +K+ P +AGV T F Sbjct: 36 YVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAF 95 Query: 406 YLSN 417 YL++ Sbjct: 96 YLTS 99
>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein| 21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21) Length = 305 Score = 35.4 bits (80), Expect = 0.056 Identities = 20/73 (27%), Positives = 30/73 (41%) Frame = +1 Query: 199 VSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPG 378 V F+Q WG ++ + T L L +D Y G + +K+ PG Sbjct: 23 VHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPG 82 Query: 379 YTAGVNTXFYLSN 417 +AG T FYL + Sbjct: 83 NSAGTVTTFYLKS 95
>XTH24_ARATH (P24806) Xyloglucan endotransglucosylase/hydrolase protein 24| precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) Length = 269 Score = 35.0 bits (79), Expect = 0.074 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = +1 Query: 199 VSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPG 378 VS+ F+ + WG + + LTL +D Y G + +K+ PG Sbjct: 19 VSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPG 78 Query: 379 YTAGVNTXFYLSN 417 +AG T FYL + Sbjct: 79 NSAGTVTTFYLKS 91
>XTH_SOYBN (Q39857) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) (Fragment) Length = 295 Score = 34.3 bits (77), Expect = 0.13 Identities = 19/68 (27%), Positives = 29/68 (42%) Frame = +1 Query: 214 FSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYTAGV 393 F + Y W H + + L +D Y G+F + +K+ PG +AG Sbjct: 33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGT 92 Query: 394 NTXFYLSN 417 T FYLS+ Sbjct: 93 VTAFYLSS 100
>XTH33_ARATH (Q8LC45) Probable xyloglucan endotransglucosylase/hydrolase protein| 33 precursor (EC 2.4.1.207) (At-XTH33) (XTH-33) Length = 310 Score = 33.9 bits (76), Expect = 0.16 Identities = 20/78 (25%), Positives = 32/78 (41%) Frame = +1 Query: 190 SSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKV 369 + + S +S +G + ++ LTL D Y G+F +K+ Sbjct: 35 TDQFSKIAIENGFSRRFGAHNIQVNGSLAKLTL--DKSSGAGLVSKNKYHYGFFSARLKL 92 Query: 370 QPGYTAGVNTXFYLSNNE 423 G+ +GV FYLSN E Sbjct: 93 PAGFASGVVVAFYLSNAE 110
>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein| 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) Length = 284 Score = 32.7 bits (73), Expect = 0.37 Identities = 19/75 (25%), Positives = 30/75 (40%) Frame = +1 Query: 193 SKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQ 372 S V + F + WG + + LTL +D Y G + +K+ Sbjct: 23 SPVFAGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLV 82 Query: 373 PGYTAGVNTXFYLSN 417 PG +AG T +YL + Sbjct: 83 PGNSAGTVTAYYLKS 97
>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22| precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) Length = 284 Score = 32.3 bits (72), Expect = 0.48 Identities = 19/71 (26%), Positives = 27/71 (38%) Frame = +1 Query: 205 STPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYT 384 S F + WG + + LTL +D Y G + MK+ PG + Sbjct: 20 SANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNS 79 Query: 385 AGVNTXFYLSN 417 AG T YL + Sbjct: 80 AGTVTTLYLKS 90
>BTBDC_HUMAN (Q8IY92) BTB/POZ domain-containing protein 12| Length = 1151 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = -1 Query: 404 KXVLTPAV*PGWTFMETPK*PFRYDRFDLNPLPELRSIQRVRAVW 270 K +TP P ++ METP DRF + PLP+ + + +++ ++ Sbjct: 874 KVPITPM--PQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIF 916
>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein| 23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23) Length = 286 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/71 (23%), Positives = 28/71 (39%) Frame = +1 Query: 205 STPFSQWYSTLWGPQHQSLSPDQTALTLWMDXXXXXXXXXXXXYRNGYFGVSMKVQPGYT 384 S F + WG ++ + LTL +D Y G + +K+ G + Sbjct: 23 SANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNS 82 Query: 385 AGVNTXFYLSN 417 AG T +YL + Sbjct: 83 AGTVTAYYLKS 93
>BFR1_SCHPO (P41820) Brefeldin A resistance protein| Length = 1530 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = -1 Query: 233 VLYHCE---NGVELTLELG*YPGDGCASPCSSITAPTTITMRCE 111 +L HC N EL + LG PG GC++ S+T+ T R E Sbjct: 176 ILSHCHALANAGELVMVLG-QPGSGCSTFLRSVTSDTVHYKRVE 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,159,194 Number of Sequences: 219361 Number of extensions: 893828 Number of successful extensions: 2419 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2359 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2416 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
