ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet95h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 240 3e-60
2dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic D... 240 3e-60
3dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic D... 240 3e-60
4ref|XM_468005.1| Oryza sativa (japonica cultivar-group), mRNA 234 2e-58
5dbj|AK066977.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 2e-58
6dbj|AK101234.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
7gb|BT018613.1| Zea mays clone EL01N0501C04.d mRNA sequence 168 1e-38
8dbj|AB218781.1| Prunus mume Pm27 mRNA, complete cds 101 2e-18
9ref|NM_001036173.1| Arabidopsis thaliana unknown protein AT1G681... 80 7e-12
10ref|NM_105484.3| Arabidopsis thaliana unknown protein AT1G68140 ... 80 7e-12
11gb|AY093375.1| Arabidopsis thaliana unknown protein (At1g68140) ... 80 7e-12
12gb|AY062576.1| Arabidopsis thaliana Unknown protein (At1g68140; ... 80 7e-12
13gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23... 80 7e-12
14emb|BX813707.1|CNS0ADO0 Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
15emb|BX815191.1|CNS0AD01 Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
16emb|BX815717.1|CNS0ACW9 Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
17emb|BX818045.1|CNS0ACKE Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
18gb|AC016447.5|AC016447 Arabidopsis thaliana chromosome 1 BAC T22... 80 7e-12
19ref|NM_192758.1| Oryza sativa (japonica cultivar-group), predic... 58 3e-05
20dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
21dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
22dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
23dbj|AK066561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
24ref|NM_106426.2| Arabidopsis thaliana unknown protein AT1G77770 ... 56 1e-04
25ref|NM_202434.1| Arabidopsis thaliana unknown protein AT1G77770 ... 56 1e-04
26gb|DQ086848.1| Arabidopsis thaliana At1g77770 mRNA, complete cds 56 1e-04
27gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32... 56 1e-04
28gb|BT004937.1| Arabidopsis thaliana clone U20649 unknown protein... 56 1e-04
29gb|BT004119.1| Arabidopsis thaliana clone RAFL15-20-E13 (R20649)... 56 1e-04
30emb|BX816298.1|CNS0AAV1 Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
31gb|BT014040.1| Lycopersicon esculentum clone 133105F, mRNA sequence 42 1.6
32gb|AC140433.3| Mus musculus BAC clone RP23-96L16 from chromosome... 42 1.6
33gb|AC122381.2| Mus musculus BAC clone RP23-477C4 from chromosome... 42 1.6
34gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
35gb|BC062632.1| Homo sapiens hypothetical LOC400590, mRNA (cDNA c... 40 6.3
36emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete ... 40 6.3
37emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in... 40 6.3
38emb|BX927337.10| Zebrafish DNA sequence from clone CH211-139D20 ... 40 6.3
39gb|AC027793.9| Homo sapiens chromosome 17, clone RP11-229K15, co... 40 6.3
40ref|XR_000654.1| PREDICTED: Homo sapiens hypothetical LOC400590 ... 40 6.3
41ref|XR_000581.1| PREDICTED: Homo sapiens hypothetical LOC400590 ... 40 6.3
42gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.3
43gb|AC138207.3| Homo sapiens chromosome 17, clone RP11-848P1, com... 40 6.3
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
45gb|AC017069.12| Homo sapiens BAC clone RP11-380P3 from 2, comple... 40 6.3
46dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.3
47dbj|BS000024.1| Pan troglodytes chromosome 22 clone:PTB-078F18, ... 40 6.3
48dbj|AP001666.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.3
49gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosom... 40 6.3
50dbj|AP001346.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 6.3 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  240 bits (121), Expect = 3e-60
 Identities = 253/297 (85%)
 Strand = Plus / Plus

                                                                            
Query: 169      gacaggtttccaagaaaatggcaagaaatgcaagggcgaagaggcatgcggctcgtcgtc 228
                ||||||||||| |  |||||||||||| ||||||||| | |||||||| ||||||||  |
Sbjct: 32516238 gacaggtttccgaagaaatggcaagaagtgcaagggcaaggaggcatgtggctcgtcagc 32516297

                                                                            
Query: 229      tcagggccacgccgtatcctattccttcgtaccgctggaaggcaatgaaaggagccaacc 288
                | ||  || | |||||||| || ||||||||||||||||| |||||||||| | | ||||
Sbjct: 32516298 ttagatccgcaccgtatcccatcccttcgtaccgctggaaagcaatgaaagaatcaaacc 32516357

                                                                            
Query: 289      ggaagaaagcactgccaactgtgcagaagatggactgggaagatgccaactgctctgtgt 348
                | |||||| | |||||| |||  |||||||||||||||||||||||||||||||||||||
Sbjct: 32516358 gaaagaaaactctgccagctgcacagaagatggactgggaagatgccaactgctctgtgt 32516417

                                                                            
Query: 349      gcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgcc 408
                ||||||| ||||| || |||||||| || ||||||||||| || ||||| || || || |
Sbjct: 32516418 gcatggaatacccgcataatgctgttctcctcctttgttcttcgcatgataaaggttgtc 32516477

                                                                         
Query: 409      gcccttacatgtgtggaacgagctaccggcactcgaattgtctcgatcagttcaaga 465
                ||||||||||||||||||| ||| |||| ||||| ||||| || ||||| |||||||
Sbjct: 32516478 gcccttacatgtgtggaactagccaccgccactcaaattgccttgatcaattcaaga 32516534
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>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1079_F11
          Length = 122402

 Score =  240 bits (121), Expect = 3e-60
 Identities = 253/297 (85%)
 Strand = Plus / Plus

                                                                          
Query: 169    gacaggtttccaagaaaatggcaagaaatgcaagggcgaagaggcatgcggctcgtcgtc 228
              ||||||||||| |  |||||||||||| ||||||||| | |||||||| ||||||||  |
Sbjct: 119631 gacaggtttccgaagaaatggcaagaagtgcaagggcaaggaggcatgtggctcgtcagc 119690

                                                                          
Query: 229    tcagggccacgccgtatcctattccttcgtaccgctggaaggcaatgaaaggagccaacc 288
              | ||  || | |||||||| || ||||||||||||||||| |||||||||| | | ||||
Sbjct: 119691 ttagatccgcaccgtatcccatcccttcgtaccgctggaaagcaatgaaagaatcaaacc 119750

                                                                          
Query: 289    ggaagaaagcactgccaactgtgcagaagatggactgggaagatgccaactgctctgtgt 348
              | |||||| | |||||| |||  |||||||||||||||||||||||||||||||||||||
Sbjct: 119751 gaaagaaaactctgccagctgcacagaagatggactgggaagatgccaactgctctgtgt 119810

                                                                          
Query: 349    gcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgcc 408
              ||||||| ||||| || |||||||| || ||||||||||| || ||||| || || || |
Sbjct: 119811 gcatggaatacccgcataatgctgttctcctcctttgttcttcgcatgataaaggttgtc 119870

                                                                       
Query: 409    gcccttacatgtgtggaacgagctaccggcactcgaattgtctcgatcagttcaaga 465
              ||||||||||||||||||| ||| |||| ||||| ||||| || ||||| |||||||
Sbjct: 119871 gcccttacatgtgtggaactagccaccgccactcaaattgccttgatcaattcaaga 119927
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>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1353_F08
          Length = 101988

 Score =  240 bits (121), Expect = 3e-60
 Identities = 253/297 (85%)
 Strand = Plus / Plus

                                                                         
Query: 169   gacaggtttccaagaaaatggcaagaaatgcaagggcgaagaggcatgcggctcgtcgtc 228
             ||||||||||| |  |||||||||||| ||||||||| | |||||||| ||||||||  |
Sbjct: 13211 gacaggtttccgaagaaatggcaagaagtgcaagggcaaggaggcatgtggctcgtcagc 13270

                                                                         
Query: 229   tcagggccacgccgtatcctattccttcgtaccgctggaaggcaatgaaaggagccaacc 288
             | ||  || | |||||||| || ||||||||||||||||| |||||||||| | | ||||
Sbjct: 13271 ttagatccgcaccgtatcccatcccttcgtaccgctggaaagcaatgaaagaatcaaacc 13330

                                                                         
Query: 289   ggaagaaagcactgccaactgtgcagaagatggactgggaagatgccaactgctctgtgt 348
             | |||||| | |||||| |||  |||||||||||||||||||||||||||||||||||||
Sbjct: 13331 gaaagaaaactctgccagctgcacagaagatggactgggaagatgccaactgctctgtgt 13390

                                                                         
Query: 349   gcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgcc 408
             ||||||| ||||| || |||||||| || ||||||||||| || ||||| || || || |
Sbjct: 13391 gcatggaatacccgcataatgctgttctcctcctttgttcttcgcatgataaaggttgtc 13450

                                                                      
Query: 409   gcccttacatgtgtggaacgagctaccggcactcgaattgtctcgatcagttcaaga 465
             ||||||||||||||||||| ||| |||| ||||| ||||| || ||||| |||||||
Sbjct: 13451 gcccttacatgtgtggaactagccaccgccactcaaattgccttgatcaattcaaga 13507
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>ref|XM_468005.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1488

 Score =  234 bits (118), Expect = 2e-58
 Identities = 241/282 (85%)
 Strand = Plus / Plus

                                                                       
Query: 184 aaatggcaagaaatgcaagggcgaagaggcatgcggctcgtcgtctcagggccacgccgt 243
           |||||||||||| ||||||||| | |||||||| ||||||||  || ||  || | ||||
Sbjct: 161 aaatggcaagaagtgcaagggcaaggaggcatgtggctcgtcagcttagatccgcaccgt 220

                                                                       
Query: 244 atcctattccttcgtaccgctggaaggcaatgaaaggagccaaccggaagaaagcactgc 303
           |||| || ||||||||||||||||| |||||||||| | | ||||| |||||| | ||||
Sbjct: 221 atcccatcccttcgtaccgctggaaagcaatgaaagaatcaaaccgaaagaaaactctgc 280

                                                                       
Query: 304 caactgtgcagaagatggactgggaagatgccaactgctctgtgtgcatggagtacccac 363
           || |||  |||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 281 cagctgcacagaagatggactgggaagatgccaactgctctgtgtgcatggaatacccgc 340

                                                                       
Query: 364 acaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatgtgtg 423
           | |||||||| || ||||||||||| || ||||| || || || ||||||||||||||||
Sbjct: 341 ataatgctgttctcctcctttgttcttcgcatgataaaggttgtcgcccttacatgtgtg 400

                                                     
Query: 424 gaacgagctaccggcactcgaattgtctcgatcagttcaaga 465
           |||| ||| |||| ||||| ||||| || ||||| |||||||
Sbjct: 401 gaactagccaccgccactcaaattgccttgatcaattcaaga 442
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>dbj|AK066977.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089K11, full
           insert sequence
          Length = 1488

 Score =  234 bits (118), Expect = 2e-58
 Identities = 241/282 (85%)
 Strand = Plus / Plus

                                                                       
Query: 184 aaatggcaagaaatgcaagggcgaagaggcatgcggctcgtcgtctcagggccacgccgt 243
           |||||||||||| ||||||||| | |||||||| ||||||||  || ||  || | ||||
Sbjct: 161 aaatggcaagaagtgcaagggcaaggaggcatgtggctcgtcagcttagatccgcaccgt 220

                                                                       
Query: 244 atcctattccttcgtaccgctggaaggcaatgaaaggagccaaccggaagaaagcactgc 303
           |||| || ||||||||||||||||| |||||||||| | | ||||| |||||| | ||||
Sbjct: 221 atcccatcccttcgtaccgctggaaagcaatgaaagaatcaaaccgaaagaaaactctgc 280

                                                                       
Query: 304 caactgtgcagaagatggactgggaagatgccaactgctctgtgtgcatggagtacccac 363
           || |||  |||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 281 cagctgcacagaagatggactgggaagatgccaactgctctgtgtgcatggaatacccgc 340

                                                                       
Query: 364 acaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatgtgtg 423
           | |||||||| || ||||||||||| || ||||| || || || ||||||||||||||||
Sbjct: 341 ataatgctgttctcctcctttgttcttcgcatgataaaggttgtcgcccttacatgtgtg 400

                                                     
Query: 424 gaacgagctaccggcactcgaattgtctcgatcagttcaaga 465
           |||| ||| |||| ||||| ||||| || ||||| |||||||
Sbjct: 401 gaactagccaccgccactcaaattgccttgatcaattcaaga 442
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>dbj|AK101234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031J23, full
            insert sequence
          Length = 3859

 Score =  224 bits (113), Expect = 2e-55
 Identities = 251/297 (84%)
 Strand = Plus / Plus

                                                                        
Query: 169  gacaggtttccaagaaaatggcaagaaatgcaagggcgaagaggcatgcggctcgtcgtc 228
            ||||||||||| |  |||||||||||| ||||||||| | |||||||| ||||||||  |
Sbjct: 2489 gacaggtttccgaagaaatggcaagaagtgcaagggcaaggaggcatgtggctcgtcagc 2548

                                                                        
Query: 229  tcagggccacgccgtatcctattccttcgtaccgctggaaggcaatgaaaggagccaacc 288
            | ||  || | |||||||| |  ||||||||||||||||| |||||||||| | | ||||
Sbjct: 2549 ttagatccgcaccgtatcccaccccttcgtaccgctggaaagcaatgaaagaatcaaacc 2608

                                                                        
Query: 289  ggaagaaagcactgccaactgtgcagaagatggactgggaagatgccaactgctctgtgt 348
            | |||||| | |||||| |||  ||||||||||||||||||||||| |||||||||||||
Sbjct: 2609 gaaagaaaactctgccagctgcacagaagatggactgggaagatgcgaactgctctgtgt 2668

                                                                        
Query: 349  gcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgcc 408
            ||||||| ||||| || |||||||| || ||||||||||| || ||||| || || || |
Sbjct: 2669 gcatggaatacccgcataatgctgttctcctcctttgttcttcgcatgataaaggttgtc 2728

                                                                     
Query: 409  gcccttacatgtgtggaacgagctaccggcactcgaattgtctcgatcagttcaaga 465
            ||||||||||||||||||| ||| |||| ||||| ||||| || ||||| |||||||
Sbjct: 2729 gcccttacatgtgtggaactagccaccgccactcaaattgccttgatcaattcaaga 2785
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>gb|BT018613.1| Zea mays clone EL01N0501C04.d mRNA sequence
          Length = 1457

 Score =  168 bits (85), Expect = 1e-38
 Identities = 145/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 301 tgccaactgtgcagaagatggactgggaagatgccaactgctctgtgtgcatggagtacc 360
           |||||||  |||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 303 tgccaaccttgcaaaagatggactgggaagatgccaattgctctgtgtgcatggaatacc 362

                                                                       
Query: 361 cacacaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatgt 420
           |||| |||||||||||  ||||||||||||| ||||| ||||| || || ||||| ||||
Sbjct: 363 cacataatgctgtgctcatcctttgttcatcccatgataagggttgtcgtccttatatgt 422

                                                        
Query: 421 gtggaacgagctaccggcactcgaattgtctcgatcagttcaaga 465
           ||||||| |||||||| ||||| |||||  | |||||||||||||
Sbjct: 423 gtggaactagctaccgccactctaattgcttggatcagttcaaga 467
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>dbj|AB218781.1| Prunus mume Pm27 mRNA, complete cds
          Length = 1622

 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Plus

                                                                       
Query: 321 gactgggaagatgccaactgctctgtgtgcatggagtacccacacaatgctgtgcttctc 380
           |||||||| ||||| |  || ||||||||||||||||| || |||||||| || ||||||
Sbjct: 364 gactgggatgatgcaacatgttctgtgtgcatggagtatcctcacaatgccgttcttctc 423

                                                          
Query: 381 ctttgttcatctcatgacaagggctgccgcccttacatgtgtggaac 427
           || ||||| |||||||||||||| ||||| || ||||||||||||||
Sbjct: 424 ctatgttcctctcatgacaagggttgccgaccctacatgtgtggaac 470
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>ref|NM_001036173.1| Arabidopsis thaliana unknown protein AT1G68140 transcript variant
           AT1G68140.2 mRNA, complete cds
          Length = 1571

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 393 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 452

                               
Query: 408 cgcccttacatgtgtggaac 427
           || |||||||||||||||||
Sbjct: 453 cgtccttacatgtgtggaac 472
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>ref|NM_105484.3| Arabidopsis thaliana unknown protein AT1G68140 transcript variant
           AT1G68140.1 mRNA, complete cds
          Length = 1649

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 393 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 452

                               
Query: 408 cgcccttacatgtgtggaac 427
           || |||||||||||||||||
Sbjct: 453 cgtccttacatgtgtggaac 472
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>gb|AY093375.1| Arabidopsis thaliana unknown protein (At1g68140) mRNA, complete cds
          Length = 1053

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 172 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 231

                               
Query: 408 cgcccttacatgtgtggaac 427
           || |||||||||||||||||
Sbjct: 232 cgtccttacatgtgtggaac 251
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>gb|AY062576.1| Arabidopsis thaliana Unknown protein (At1g68140; T23K23.1) mRNA,
           complete cds
          Length = 1521

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 392 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 451

                               
Query: 408 cgcccttacatgtgtggaac 427
           || |||||||||||||||||
Sbjct: 452 cgtccttacatgtgtggaac 471
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>gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23K23 genomic sequence,
            complete sequence
          Length = 101966

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                        
Query: 348  tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
            ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 4147 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 4206

                                
Query: 408  cgcccttacatgtgtggaac 427
            || |||||||||||||||||
Sbjct: 4207 cgtccttacatgtgtggaac 4226
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>emb|BX813707.1|CNS0ADO0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB35ZC11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1292

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 354 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 413

                               
Query: 408 cgcccttacatgtgtggaac 427
           || |||||||||||||||||
Sbjct: 414 cgtccttacatgtgtggaac 433
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>emb|BX815191.1|CNS0AD01 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS40ZC05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1460

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 365 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 424

                               
Query: 408 cgcccttacatgtgtggaac 427
           || |||||||||||||||||
Sbjct: 425 cgtccttacatgtgtggaac 444
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>emb|BX815717.1|CNS0ACW9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS87ZD08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1304

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 332 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 391

                               
Query: 408 cgcccttacatgtgtggaac 427
           || |||||||||||||||||
Sbjct: 392 cgtccttacatgtgtggaac 411
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>emb|BX818045.1|CNS0ACKE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL58ZE07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1432

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 322 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 381

                               
Query: 408 cgcccttacatgtgtggaac 427
           || |||||||||||||||||
Sbjct: 382 cgtccttacatgtgtggaac 401
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>gb|AC016447.5|AC016447 Arabidopsis thaliana chromosome 1 BAC T22E19 genomic sequence, complete
              sequence
          Length = 107816

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                          
Query: 348    tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
              ||||||||||  |||||||| ||||| ||||| || || ||||||||||||||||| || 
Sbjct: 103622 tgcatggagtgtccacacaacgctgtccttcttctctgctcatctcatgacaagggatgt 103681

                                  
Query: 408    cgcccttacatgtgtggaac 427
              || |||||||||||||||||
Sbjct: 103682 cgtccttacatgtgtggaac 103701
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>ref|NM_192758.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 981

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 348 tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
           ||||||||  |||||||||| ||||| || ||| | || || || ||||| |||||||||
Sbjct: 175 tgcatggatcacccacacaacgctgttctgctcgtctgctcgtcgcatgagaagggctgc 234

                                                    
Query: 408 cgcccttacatgtgtggaacgagctaccggcactcgaattg 448
           ||||||| |||||| |  || |||||||| ||||| |||||
Sbjct: 235 cgccctttcatgtgcgacacaagctaccgacactccaattg 275
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                            
Query: 348      tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
                ||||||||  |||||||||| ||||| || ||| | || || || ||||| |||||||||
Sbjct: 24280244 tgcatggatcacccacacaacgctgttctgctcgtctgctcgtcgcatgagaagggctgc 24280185

                                                         
Query: 408      cgcccttacatgtgtggaacgagctaccggcactcgaattg 448
                ||||||| |||||| |  || |||||||| ||||| |||||
Sbjct: 24280184 cgccctttcatgtgcgacacaagctaccgacactccaattg 24280144
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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0046B10
          Length = 142596

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                          
Query: 348    tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
              ||||||||  |||||||||| ||||| || ||| | || || || ||||| |||||||||
Sbjct: 104808 tgcatggatcacccacacaacgctgttctgctcgtctgctcgtcgcatgagaagggctgc 104749

                                                       
Query: 408    cgcccttacatgtgtggaacgagctaccggcactcgaattg 448
              ||||||| |||||| |  || |||||||| ||||| |||||
Sbjct: 104748 cgccctttcatgtgcgacacaagctaccgacactccaattg 104708
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E01
          Length = 166753

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                         
Query: 348   tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
             ||||||||  |||||||||| ||||| || ||| | || || || ||||| |||||||||
Sbjct: 26148 tgcatggatcacccacacaacgctgttctgctcgtctgctcgtcgcatgagaagggctgc 26089

                                                      
Query: 408   cgcccttacatgtgtggaacgagctaccggcactcgaattg 448
             ||||||| |||||| |  || |||||||| ||||| |||||
Sbjct: 26088 cgccctttcatgtgcgacacaagctaccgacactccaattg 26048
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>dbj|AK066561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D14, full
            insert sequence
          Length = 2396

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                        
Query: 348  tgcatggagtacccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgc 407
            ||||||||  |||||||||| ||||| || ||| | || || || ||||| |||||||||
Sbjct: 1175 tgcatggatcacccacacaacgctgttctgctcgtctgctcgtcgcatgagaagggctgc 1234

                                                     
Query: 408  cgcccttacatgtgtggaacgagctaccggcactcgaattg 448
            ||||||| |||||| |  || |||||||| ||||| |||||
Sbjct: 1235 cgccctttcatgtgcgacacaagctaccgacactccaattg 1275
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>ref|NM_106426.2| Arabidopsis thaliana unknown protein AT1G77770 transcript variant
           AT1G77770.1 mRNA, complete cds
          Length = 1070

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 360 ccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatg 419
           ||||||||||| || |||||||| ||||| ||| || |||| || ||||| |||||||||
Sbjct: 217 ccacacaatgcggttcttctcctgtgttcgtcttatcacaaaggatgccgtccttacatg 276

               
Query: 420 tgtg 423
           ||||
Sbjct: 277 tgtg 280
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>ref|NM_202434.1| Arabidopsis thaliana unknown protein AT1G77770 transcript variant
           AT1G77770.2 mRNA, complete cds
          Length = 1188

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 360 ccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatg 419
           ||||||||||| || |||||||| ||||| ||| || |||| || ||||| |||||||||
Sbjct: 229 ccacacaatgcggttcttctcctgtgttcgtcttatcacaaaggatgccgtccttacatg 288

               
Query: 420 tgtg 423
           ||||
Sbjct: 289 tgtg 292
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>gb|DQ086848.1| Arabidopsis thaliana At1g77770 mRNA, complete cds
          Length = 798

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 360 ccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatg 419
           ||||||||||| || |||||||| ||||| ||| || |||| || ||||| |||||||||
Sbjct: 112 ccacacaatgcggttcttctcctgtgttcgtcttatcacaaaggatgccgtccttacatg 171

               
Query: 420 tgtg 423
           ||||
Sbjct: 172 tgtg 175
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>gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete
             sequence
          Length = 82454

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 360   ccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatg 419
             ||||||||||| || |||||||| ||||| ||| || |||| || ||||| |||||||||
Sbjct: 54521 ccacacaatgcggttcttctcctgtgttcgtcttatcacaaaggatgccgtccttacatg 54462

                 
Query: 420   tgtg 423
             ||||
Sbjct: 54461 tgtg 54458
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>gb|BT004937.1| Arabidopsis thaliana clone U20649 unknown protein (At1g77770) mRNA,
           complete cds
          Length = 829

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 360 ccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatg 419
           ||||||||||| || |||||||| ||||| ||| || |||| || ||||| |||||||||
Sbjct: 112 ccacacaatgcggttcttctcctgtgttcgtcttatcacaaaggatgccgtccttacatg 171

               
Query: 420 tgtg 423
           ||||
Sbjct: 172 tgtg 175
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>gb|BT004119.1| Arabidopsis thaliana clone RAFL15-20-E13 (R20649) unknown protein
           (At1g77770) mRNA, complete cds
          Length = 1104

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 360 ccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatg 419
           ||||||||||| || |||||||| ||||| ||| || |||| || ||||| |||||||||
Sbjct: 217 ccacacaatgcggttcttctcctgtgttcgtcttatcacaaaggatgccgtccttacatg 276

               
Query: 420 tgtg 423
           ||||
Sbjct: 277 tgtg 280
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>emb|BX816298.1|CNS0AAV1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH3ZD01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1187

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 360 ccacacaatgctgtgcttctcctttgttcatctcatgacaagggctgccgcccttacatg 419
           ||||||||||| || |||||||| ||||| ||| || |||| || ||||| |||||||||
Sbjct: 230 ccacacaatgcggttcttctcctgtgttcgtcttatcacaaaggatgccgtccttacatg 289

              
Query: 420 tgt 422
           |||
Sbjct: 290 tgt 292
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>gb|BT014040.1| Lycopersicon esculentum clone 133105F, mRNA sequence
          Length = 1423

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 351 atggagtacccacacaatgctgtgcttctcctttgttcatc 391
           |||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 382 atggagcatccacacaatgctgtccttctactttgctcatc 422
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>gb|AC140433.3| Mus musculus BAC clone RP23-96L16 from chromosome 16, complete sequence
          Length = 231593

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   cacacaatgctgtgcttctcc 381
             |||||||||||||||||||||
Sbjct: 23810 cacacaatgctgtgcttctcc 23830
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>gb|AC122381.2| Mus musculus BAC clone RP23-477C4 from chromosome 16, complete sequence
          Length = 188889

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 361    cacacaatgctgtgcttctcc 381
              |||||||||||||||||||||
Sbjct: 121897 cacacaatgctgtgcttctcc 121917
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>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04,
             complete sequence
          Length = 122599

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 105   cgccgtgcccgactccgccgggaccgcc 132
             ||||| ||||||| ||||||||||||||
Sbjct: 77523 cgccgcgcccgacaccgccgggaccgcc 77496
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>gb|BC062632.1| Homo sapiens hypothetical LOC400590, mRNA (cDNA clone MGC:70830
           IMAGE:5248762), complete cds
          Length = 1675

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 caggtttccaagaaaatggc 190
           ||||||||||||||||||||
Sbjct: 646 caggtttccaagaaaatggc 665
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>emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete genome; segment 7/10
          Length = 348950

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    accgcccggaccagcgcccc 146
              ||||||||||||||||||||
Sbjct: 285900 accgcccggaccagcgcccc 285881
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>emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in linkage group 10,
              complete sequence
          Length = 199715

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    acccacacaatgctgtgctt 377
              ||||||||||||||||||||
Sbjct: 154698 acccacacaatgctgtgctt 154717
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>emb|BX927337.10| Zebrafish DNA sequence from clone CH211-139D20 in linkage group 17,
             complete sequence
          Length = 113790

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   actgccaactgtgcagaaga 318
             ||||||||||||||||||||
Sbjct: 94560 actgccaactgtgcagaaga 94541
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>gb|AC027793.9| Homo sapiens chromosome 17, clone RP11-229K15, complete sequence
          Length = 137230

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   caggtttccaagaaaatggc 190
             ||||||||||||||||||||
Sbjct: 69941 caggtttccaagaaaatggc 69960
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>ref|XR_000654.1| PREDICTED: Homo sapiens hypothetical LOC400590 (LOC400590), misc
           RNA
          Length = 1960

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 caggtttccaagaaaatggc 190
           ||||||||||||||||||||
Sbjct: 969 caggtttccaagaaaatggc 988
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>ref|XR_000581.1| PREDICTED: Homo sapiens hypothetical LOC400590 (LOC400590), misc
           RNA
          Length = 1960

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 caggtttccaagaaaatggc 190
           ||||||||||||||||||||
Sbjct: 969 caggtttccaagaaaatggc 988
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 125     ggaccgcccggaccagcgcc 144
               ||||||||||||||||||||
Sbjct: 2870858 ggaccgcccggaccagcgcc 2870877



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 125     ggaccgcccggaccagcgcc 144
               ||||||||||||||||||||
Sbjct: 2850798 ggaccgcccggaccagcgcc 2850817
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>gb|AC138207.3| Homo sapiens chromosome 17, clone RP11-848P1, complete sequence
          Length = 212934

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   caggtttccaagaaaatggc 190
             ||||||||||||||||||||
Sbjct: 85728 caggtttccaagaaaatggc 85709
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 105      cgccgtgcccgactccgccgggaccgcc 132
                ||||| ||||||| ||||||||||||||
Sbjct: 24391733 cgccgcgcccgacaccgccgggaccgcc 24391706
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>gb|AC017069.12| Homo sapiens BAC clone RP11-380P3 from 2, complete sequence
          Length = 143252

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   tgcttctcctttgttcatct 392
             ||||||||||||||||||||
Sbjct: 94280 tgcttctcctttgttcatct 94261
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    cccctcgccgaccccgccgc 162
              ||||||||||||||||||||
Sbjct: 307668 cccctcgccgaccccgccgc 307649
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>dbj|BS000024.1| Pan troglodytes chromosome 22 clone:PTB-078F18, map 22, complete
             sequences
          Length = 70803

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   ttctcctttgttcatctcat 395
             ||||||||||||||||||||
Sbjct: 20554 ttctcctttgttcatctcat 20573
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>dbj|AP001666.1| Homo sapiens genomic DNA, chromosome 21q, section 10/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    ttctcctttgttcatctcat 395
              ||||||||||||||||||||
Sbjct: 187081 ttctcctttgttcatctcat 187100
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>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   gaaagcactgccaactgtgc 312
             ||||||||||||||||||||
Sbjct: 82937 gaaagcactgccaactgtgc 82918
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>dbj|AP001346.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B783C3, LL56-APP
              region, complete sequence
          Length = 124587

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    ttctcctttgttcatctcat 395
              ||||||||||||||||||||
Sbjct: 109358 ttctcctttgttcatctcat 109377


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,967,715
Number of Sequences: 3902068
Number of extensions: 2967715
Number of successful extensions: 58561
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58209
Number of HSP's gapped (non-prelim): 346
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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