>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 29/112 (25%), Positives = 44/112 (39%)
 Frame = -3

Query: 366  SRTMRPAKGKKRER*PGSAARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGE 187
            S  + P   K+RER P       E ++P PH  G +   +  G GP+  SR +T   A  
Sbjct: 1553 SARVSPFPAKRRERPPRKPELLQEESLPPPHSSG-FLGSKPEGPGPQAESR-DTGTEALT 1610

Query: 186  PGGGREARTSVREAIRRSKCLSGAISPTSSWLGVGLTAVALIDFSMALLASS 31
            P       T+      R   +   + P S +  V  T ++  D  + L   S
Sbjct: 1611 PHIWNRLHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDS 1662

>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 29/112 (25%), Positives = 44/112 (39%)
 Frame = -3

Query: 366  SRTMRPAKGKKRER*PGSAARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGE 187
            S  + P   K+RER P       E ++P PH  G +   +  G GP+  SR +T   A  
Sbjct: 1550 SAGVSPFPPKRRERPPRKPELLQEESLPPPHSSG-FLGSKPEGPGPQAESR-DTGTEALT 1607

Query: 186  PGGGREARTSVREAIRRSKCLSGAISPTSSWLGVGLTAVALIDFSMALLASS 31
            P       T+      R   +   + P S +  V  T ++  D  + L   S
Sbjct: 1608 PHIWNRLHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDS 1659

>HM20B_HUMAN (Q9P0W2) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily E member 1-related
           (SMARCE1-related protein) (HMG domain protein HMG20B)
           (Structural DNA-binding protein BRAF35)
           (BRCA2-associated factor 35) (Sox-lik
          Length = 317

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = -3

Query: 321 PGSAARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGEPGGGREARTSVR--- 151
           PG+AA  A    P  HGG   T  +  G+GPR          AGE G   E     R   
Sbjct: 8   PGAAAAPAGGKAPGQHGGFVVTVKQERGEGPR----------AGEKGSHEEEPVKKRGWP 57

Query: 150 EAIRRSKCL-SGAISPTSSWL 91
           +  +R K L +G  +P + ++
Sbjct: 58  KGKKRKKILPNGPKAPVTGYV 78

>KCNA4_MUSPF (Q28527) Potassium voltage-gated channel subfamily A member 4|
           (Voltage-gated potassium channel subunit Kv1.4) (FK1)
          Length = 654

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = -3

Query: 348 AKGKKRER*PGS----AARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGEPG 181
           A+ ++RER   S    AA  A +T      GG       SG G     +   ACT+ +P 
Sbjct: 25  ARARERERLAHSRAAAAAAVAAATAAVEGSGG-------SGGGSHHHHQSRGACTSHDPQ 77

Query: 180 GGREARTSVREAIRRSK 130
           GGR +R   R+   + K
Sbjct: 78  GGRGSRRRRRQRPEKKK 94

>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2|
          Length = 916

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
 Frame = -3

Query: 321 PGSAARTAESTVPRPHGGGA--YTQMR*SGKGPRTRS-RLETACTAGEPGGGREARTSVR 151
           PGSA   A   + RP G GA  ++  R  G G R R     TA   G  GG  +AR S R
Sbjct: 233 PGSAGGGAGGGLQRPGGAGAGGFSGPRTGGGGGRGRGPGGGTAGAFGRGGGKSKARKSKR 292

Query: 150 E-----AIRRSKCLSGAISPTSSWLGVGLTAVAL 64
                  +R +  L G   P     G G TA+ L
Sbjct: 293 AKRQEFEMREAPSLGGVTVPR----GDGGTAIRL 322

>VE2_HPV38 (Q80910) Regulatory protein E2|
          Length = 441

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
 Frame = -3

Query: 366 SRTMRPAKGKKRER*PGSAARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGE 187
           SR+    +G +  R   S   +   T  R  GGG   +     +GP TRSR  +   A  
Sbjct: 269 SRSRSTNRGGRDTRRSSSRGSSVSPTRGRRRGGGDSRR-----RGPVTRSRSRSLSRASS 323

Query: 186 PGGG---REARTSVREAIRRS 133
            GGG    +  T+VR   R+S
Sbjct: 324 AGGGISPDKVGTAVRSVGRQS 344

>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 41   RSAIEKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPPPGSPA 196
            R ++    S ++  PTP +L V   A  KH DL++ ++ +   S PP   P+
Sbjct: 3060 RESLPNVASTSSAPPTPGKLTVNVQAASKHADLQLDAKHI---SSPPVCKPS 3108

>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)|
          Length = 627

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -3

Query: 321 PGSAARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGEPGG 178
           PGSA+  A +  P   G G Y   +    GP + S    A  AG PGG
Sbjct: 349 PGSASAAAAAAGPGQQGPGGYGPGQQGPSGPGSASAAAAAAAAG-PGG 395

>SAP49_SCHPO (O14102) Spliceosome-associated protein 49|
          Length = 335

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 29/106 (27%), Positives = 48/106 (45%)
 Frame = +2

Query: 5   PSFSLHSSPELARSAIEKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPPP 184
           P FS  +    + +    +++AT++ P P+  LVG    +    L I +     A++  P
Sbjct: 212 PGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVP--PLSIPNVLPFTAAQHFP 269

Query: 185 GSPAVHAVSNLDLVLGPFPLYLICVYAPPPCGLGTVLSAVRAALPG 322
           G PA+  + N+ +  G  PL    V  PPP  +    S   A +PG
Sbjct: 270 GMPAM-PMMNVPMGPGGAPL----VPPPPPGMVMASPSPAAATIPG 310

>NBS1_SCHPO (O43070) DNA repair and telomere maintenance protein nbs1|
          Length = 613

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = +2

Query: 23  SSPELARSAIEKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPPPGSPAVH 202
           +S EL    IE+   ATA N TP +++     P +H    I    L    +P P SP   
Sbjct: 305 NSRELISKEIERLKYATASNSTPQKII----QPQRHIQKNIVD-DLFSVKKPLPCSPKSK 359

Query: 203 AVSNLD 220
            V  L+
Sbjct: 360 RVKTLE 365

>SOX30_HUMAN (O94993) Transcription factor SOX-30|
          Length = 753

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 10/110 (9%)
 Frame = +2

Query: 38  ARSAIEKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPPP--------GSP 193
           A S I+     ++V+P P    + + +P+ H              +PPP        G+P
Sbjct: 558 ATSTIQPPREYSSVSPCPRSAPIPQASPIPH----------PHVYQPPPLGHPATLFGTP 607

Query: 194 AVHAVSNLDLVLGP--FPLYLICVYAPPPCGLGTVLSAVRAALPGYLSRF 337
              +  +   + GP  FP    C Y+ PP G G   S++   L  Y  R+
Sbjct: 608 PRFSFHHPYFLPGPHYFPSST-CPYSRPPFGYGNFPSSMPECLSYYEDRY 656

>PP65_HCMVT (P18139) 64 kDa lower matrix phosphoprotein (PP64) (GP64)|
          Length = 551

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = -3

Query: 303 TAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGEPGGGR 172
           T E   PR  GGGA      S    R  +   TACTAG    GR
Sbjct: 402 TTERKTPRVTGGGAMAGASTSAGRKRKSASSATACTAGVMTRGR 445

>EGR4_HUMAN (Q05215) Early growth response protein 4 (EGR-4) (AT133)|
          Length = 486

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +2

Query: 173 RPPPGSPAVHAVSNLDLVLGPF-PLYLICVYAPPPCG-LGTVLSAVRAALP 319
           R PP SPA+ AVS      GP+ P  L+ V AP  CG  G   +A  A  P
Sbjct: 187 RRPPASPALDAVSAFK---GPYAPWELLSVGAPGNCGSQGDYQAAPEARFP 234

>CNRC_RALME (P37974) Nickel and cobalt resistance protein cnrC precursor|
          Length = 418

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = -3

Query: 243 SGKGPRTRSRLETACTAGEPGGGREARTSVREAIRRSKCLSGAISPTSSWLGVGLTAVAL 64
           SGK    RS    A  A        A     +A+ R   +SGA  P ++     LT  A+
Sbjct: 174 SGKEASLRSAQAKASVAAAQAAEAAATNDATQALARLSAMSGASEPYTAVTSSLLTTQAV 233

Query: 63  IDFSMALLASS 31
           +  + A LA S
Sbjct: 234 VPNAPAALAES 244

>SYE_METAC (Q8TT52) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 571

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = -3

Query: 234 GPRTRSRLETACTAGEPGGGREARTSVREAIRRSKCLSGAISPTSSWLGVGLTAVAL 64
           G  + S L  A  AGE  G  + R     AIRR    + A+      +GVG+T V++
Sbjct: 342 GKFSTSSLRKAIEAGEYSGWDDPRLPTIRAIRRRGIQAEALKKFMIEMGVGMTDVSI 398

>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 25/90 (27%), Positives = 30/90 (33%)
 Frame = +2

Query: 53   EKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPPPGSPAVHAVSNLDLVLG 232
            EK    TAV P P         PL H+     ++   R   P PGS     +  L     
Sbjct: 2398 EKGPQDTAVVPHP--------VPLPHWQPESINQAFTRPPPPYPGSTRSPVIPPLGPRYA 2449

Query: 233  PFPLYLICVYAPPPCGLGTVLSAVRAALPG 322
             FP      Y P   G+G      R   PG
Sbjct: 2450 VFPKDQRGPYPPEVAGMGMRPHGFRFGFPG 2479

>SOX30_MACFA (Q8WNV5) Transcription factor SOX-30|
          Length = 753

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 10/110 (9%)
 Frame = +2

Query: 38  ARSAIEKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPPP--------GSP 193
           A S I+     ++V+P P    + + +P+ H              +PPP        G+P
Sbjct: 558 ATSTIQPPKEYSSVSPCPRSAPIPQASPIPH----------PHVYQPPPLGHPATLFGTP 607

Query: 194 AVHAVSNLDLVLGP--FPLYLICVYAPPPCGLGTVLSAVRAALPGYLSRF 337
              +  +   + GP  FP    C Y+ PP G G   S++   L  Y  R+
Sbjct: 608 PRFSFHHPYFLPGPHYFPSST-CPYSRPPFGYGNFPSSMPECLGYYEDRY 656

>IF2_CORJK (Q4JV51) Translation initiation factor IF-2|
          Length = 922

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -3

Query: 321 PGSAARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAG-EPGGGRE 169
           P S+   AE   PRP GG A       G  PR  SR   A  AG +PGG ++
Sbjct: 175 PFSSGAPAERPAPRPRGGQAG-----PGDMPRPGSRPGGAKKAGPKPGGAKQ 221

>ASB2_RAT (Q5U2S6) Ankyrin repeat and SOCS box protein 2 (ASB-2)|
          Length = 634

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +2

Query: 11  FSLHSS---PELARSAIEKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPP 181
           +SL+SS    EL + AIE+S++     PTP++  V       H    I   T  R+S PP
Sbjct: 19  YSLYSSLSEEELVQMAIEQSLADKTRGPTPAETSVSSQT--NHQPGHIHPWT--RSSSPP 74

Query: 182 PGSPA 196
              PA
Sbjct: 75  ESPPA 79

>SYC1_STRCO (Q9L0Q6) Cysteinyl-tRNA synthetase 1 (EC 6.1.1.16) (Cysteine--tRNA|
           ligase 1) (CysRS 1)
          Length = 613

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 29/83 (34%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = -3

Query: 351 PAKG-KKRER*PGSAARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGEPGGG 175
           PA+G KKR R PG  AR  +   PRP       + R    G   R   + A   G P  G
Sbjct: 64  PARGDKKRARRPGVPAREDKKRAPRPGVPTRGDKKRAPRLGVPARGDKKRARRPGVPTRG 123

Query: 174 REARTSVREAIRRSKCLSGAISP 106
             AR S  +  R    L GA  P
Sbjct: 124 GVAR-SGNDGPRVPLALLGAYYP 145

>PMP15_CHLPN (Q9Z883) Probable outer membrane protein pmp15 precursor|
           (Polymorphic membrane protein 15)
          Length = 938

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 134 DLRIASRTLVRASRPPPGSPAVHAVSNLDLVLGPFPLYLICVYAP 268
           D+   + T  + +  PP   A+H+  N++L +G  P Y +  Y P
Sbjct: 339 DIIFNNNTASKHALNPPYRNAIHSTPNMNLQIGARPGYRVLFYDP 383

>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore domain|
            potassium channel Ork1)
          Length = 1001

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
 Frame = +2

Query: 2    SPSFSLHSSPELARSAIEKSMSATAVNPTPSQLLVGEM-APL------KHFDLRIASRTL 160
            SP+    ++P  ARS +E   S T      SQ+  G   AP       + F +R  +  +
Sbjct: 830  SPTGGAATAPA-ARSLLEPPPSYTERAANQSQITAGPSNAPTVQSKFRRRFSVRPTALQI 888

Query: 161  VRASRPPPGSPAVHAVSNL----DLVLGPFPLYLICVYAPPPCGLGTVLSA 301
                 PPPG+  +   S       L L P PL        PP G G+ L A
Sbjct: 889  PPGQAPPPGASLMEQSSQTALQRRLSLRPSPLARELSPTSPPGGSGSALPA 939

>CN044_MOUSE (Q8CB59) Protein C14orf44 homolog|
          Length = 589

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 219 SRLETACTAGEPGGGREARTSVREAIRRSKCLSGAISPTSSWLGVGLT 76
           S    +C A   GGG+++       + RS+ LSG  S +++ L V +T
Sbjct: 408 SHTPRSCDAATAGGGKKSPQPTATPLPRSRSLSGLASFSANTLPVHIT 455

>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +2

Query: 20  HSSPELARSAIEKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPPPGS 190
           HSS   A+S  +  +SA A +  P    V  +AP     L I++  + R S  P GS
Sbjct: 102 HSSNRAAKSVGQLVVSAAAASKPPPVASVSILAPKSLGQLVISASAMPRPSPAPLGS 158

>K0056_MOUSE (Q6ZQK0) Protein KIAA0056|
          Length = 1506

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 5   PSFSLHSSPELARSAIEKSMSATAVNPTPSQLLVGE 112
           P FSL   P+  ++ IE  ++ T+  P P + L+ +
Sbjct: 229 PKFSLKEKPQSIQTCIEVFVALTSFEPIPHKFLISQ 264

>PP65_HCMVA (P06725) 65 kDa lower matrix phosphoprotein (PP65) (Tegument|
           protein UL83)
          Length = 561

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -3

Query: 303 TAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGEPGGGR 172
           T E   PR  GGGA      S    R  +   TACT+G    GR
Sbjct: 412 TTERKTPRVTGGGAMAGASTSAGRKRKSASSATACTSGVMTRGR 455

>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1904

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 351 PAKGKKRER*PGSAARTAESTVPRPHGGGAYTQMR 247
           P  G  + R P S ++TA+   P  + GG+YT  R
Sbjct: 243 PPAGTPKTRDPYSYSQTADQHTPSYYNGGSYTSPR 277

>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa)
          Length = 1200

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -3

Query: 219 SRLETACTAGEPGGGREARTSVREAIRRSKCLSGAISPTSS 97
           S L +ACT G P   R A TS   + R    L     PTSS
Sbjct: 369 SSLASACTGGIPSSSRNAITSSYSSTRGISQLWKRSGPTSS 409

>SYE_METMA (Q8PW52) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 571

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -3

Query: 234 GPRTRSRLETACTAGEPGGGREARTSVREAIRRSKCLSGAISPTSSWLGVGLTAVAL 64
           G  + S L  A  +GE  G  + R     AIRR    + A+      +GVG+T V++
Sbjct: 342 GKFSTSTLRKAIESGEYSGWDDPRLPTIRAIRRRGIRAEALKKFMIEMGVGMTDVSI 398

>DAAM2_HUMAN (Q86T65) Disheveled-associated activator of morphogenesis 2|
          Length = 1068

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +2

Query: 167 ASRPPPGSPAV--HAVSNLDLVLGPFPLYLICVYAPPP 274
           +S PPPG P     +++  DL   P PL   C   PPP
Sbjct: 520 SSPPPPGGPLTLSSSMTTNDLPPPPPPLPFACCPPPPP 557

>DNAA_AGRT5 (Q8UIH1) Chromosomal replication initiator protein dnaA|
          Length = 487

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
 Frame = -3

Query: 366 SRTMRPAKGKKRER*P---GSAAR------TAESTVPRPHGGGAYTQMR*SGKGPRTRSR 214
           SR +RPA+ ++R +     G+A R      +  +T P      A   +R  G GP   S 
Sbjct: 83  SRPVRPAQTEERAQPVQEVGAAPRNKSFIPSQSATAPAAQPMAAQATLRQGGSGPLFGSP 142

Query: 213 LETACTAGEPGGGREARTSVREAIRRSKCLSGAI--SPTSSWLGVGLTAVALI 61
           L+T  T      G   R ++  A   ++  +GA+  +P     GVGL    L+
Sbjct: 143 LDTRFTFDTFVEGSSNRVALAAAKTIAEAGAGAVRFNPLFIHAGVGLGKTHLL 195

>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
 Frame = -3

Query: 342 GKKRER*PGSAARTAESTVPRPHGGGAYTQMR*SGKGPRTRSRLETACTAGEP-----GG 178
           G  R + PG   R +  ++PRP GGGA  +    G GPR    +     A  P     GG
Sbjct: 266 GGPRPQAPGGN-RPSPGSMPRPQGGGAGPR---PGGGPRPNPGMMPQRPAAGPRPGPGGG 321

Query: 177 GR 172
           GR
Sbjct: 322 GR 323

>GFRA4_HUMAN (Q9GZZ7) GDNF family receptor alpha-4 precursor (GFR-alpha-4)|
           (Persephin receptor)
          Length = 299

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 219 SRLETACTAGEPGGGREARTSVREAIRRSKCLSGAISPTSS 97
           +R+   C  G  G  RE   + R    R++CL GAI   +S
Sbjct: 211 ARVAPWCDCGASGNRREDCEAFRGLFTRNRCLDGAIQAFAS 251

>RL18A_HUMAN (Q02543) 60S ribosomal protein L18a|
          Length = 176

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 28  AGAS*ECHREVDERHRC*SHSQPAARGRNGAAQALRPP 141
           AGA  +C+R++  RHR  +HS    +    AA   R P
Sbjct: 103 AGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRP 140

>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)|
          Length = 2341

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 41  RSAIEKSMSATAVNPTPSQLLVGEMAPLKHFDLRIASRTLVRASRPPPGSPAVHAVS 211
           R A+ +  +A + NPTP  LL+G    L+       S   V+    PP   AV + S
Sbjct: 790 RQAVRRRHNAGS-NPTPPTLLIGSPLSLQDGQQGQQSTAQVKVQSRPPSQAAVLSAS 845

>P66A_MOUSE (Q8CHY6) Transcriptional repressor p66 alpha (GATA zinc finger|
           domain-containing protein 2A)
          Length = 629

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 17/135 (12%)
 Frame = -3

Query: 363 RTMRP------AKGKKRER*PGSAARTAES---TVPRPHGGGAYTQMR*SGKGPRTRSRL 211
           RT+ P       + KK +   GS+  T +     +P P  G A   +R       T   +
Sbjct: 13  RTLEPDLTEDDVENKKMKMEKGSSELTVDGDSRVMPEPSAGSAQGLLR-------TTEAM 65

Query: 210 ETACTAGEPGGGR-EARTSVREAIRRSK-------CLSGAISPTSSWLGVGLTAVALIDF 55
            T    G  G G  + RTS  +     +        LS +  P+S  +  GLT VAL D 
Sbjct: 66  GTGSGEGLLGDGPVDMRTSHSDMKSEKRPPSPDVIVLSDSEQPSSPRVN-GLTTVALKDT 124

Query: 54  SMALLASSGEEWREK 10
           S   L  S  E RE+
Sbjct: 125 STEALLKSSPEERER 139

>MSLN_HUMAN (Q13421) Mesothelin precursor (CAK1 antigen)|
          Length = 628

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 134 DLRIASRTLVRASRPPPGSPAVHAVSNLDLVLGPFPL 244
           D + A+R  ++   PP G P+  +VS +D + G  P+
Sbjct: 216 DQQEAARAALQGGGPPYGPPSTWSVSTMDALRGLLPV 252


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,401,262
Number of Sequences: 219361
Number of extensions: 797371
Number of successful extensions: 2902
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2902
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)