ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet95h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550632.1| Oryza sativa (japonica cultivar-group), mRNA 216 4e-53
2ref|XM_550633.1| Oryza sativa (japonica cultivar-group), mRNA 216 4e-53
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 216 4e-53
4dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic D... 216 4e-53
5dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic D... 216 4e-53
6dbj|AK106314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 4e-53
7dbj|AK063346.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 4e-53
8ref|XM_550642.1| Oryza sativa (japonica cultivar-group), mRNA 94 4e-16
9ref|XM_529834.1| PREDICTED: Pan troglodytes LOC454599 (LOC454599... 46 0.081
10ref|NM_187969.1| Oryza sativa (japonica cultivar-group), Ozsa838... 46 0.081
11gb|BC084573.1| Homo sapiens cDNA clone IMAGE:6576497 46 0.081
12gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, co... 46 0.081
13gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, co... 46 0.081
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
15dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
16emb|Z54703.1|HS156E9F H.sapiens CpG island DNA genomic Mse1 frag... 46 0.081
17ref|XM_550377.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
18ref|NM_187964.1| Oryza sativa (japonica cultivar-group), Ozsa838... 44 0.32
19ref|NM_187960.1| Oryza sativa (japonica cultivar-group), Ozsa838... 44 0.32
20ref|XM_479748.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
21ref|NM_196696.1| Oryza sativa (japonica cultivar-group) putative... 44 0.32
22gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 44 0.32
23gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Can... 44 0.32
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
27gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) ch... 44 0.32
28dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
29dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
30dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
31dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
32dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
33dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
34dbj|AK122048.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
35dbj|AK070381.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
36gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
37emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 42 1.3
38dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
39dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
40emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on ch... 42 1.3
41ref|XM_463783.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
42gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence 40 5.0
43gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
44gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.0
45gb|AY216939.1| Plasmodium vivax strain Belem YAC1H14-like sequence 40 5.0
46gb|AY216938.1| Plasmodium vivax strain IndiaVII YAC1H14-like seq... 40 5.0
47gb|AY216937.1| Plasmodium vivax strain Salvador I YAC1H14-like s... 40 5.0
48gb|AY216936.1| Plasmodium vivax strain Thai-NYU YAC1H14-like seq... 40 5.0
49gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosyntheti... 40 5.0
50gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
51ref|XM_570774.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.0
52gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.0
53gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.0
54emb|AL078583.15|HSJ119H20 Human DNA sequence from clone RP1-119H... 40 5.0
55gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
56emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 5.0
57emb|AL732570.12| Mouse DNA sequence from clone RP23-464J2 on chr... 40 5.0
58emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 5.0
59gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
60dbj|AK133343.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.0
61gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, c... 40 5.0
62gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence 40 5.0
63gb|AC153762.3| Loxodonta africana clone VMRC15-159I7, complete s... 40 5.0
64tpg|BK000295.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M15, ... 40 5.0
65gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.0
66gb|BC014752.1| Mus musculus proteasome (prosome, macropain) subu... 40 5.0
67dbj|AK043616.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 5.0
68dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
69dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
70gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) ch... 40 5.0
71gb|AF263457.1|AF263457 Zea mays SCARECROW (SCR) gene, complete cds 40 5.0
72gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.0
73dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.0
74dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
75dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
76dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
77dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
78dbj|AK106831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
79dbj|AK100567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
80dbj|AK068607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
81emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.0
82dbj|AK064959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
83gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, co... 40 5.0
84gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 40 5.0
85gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
86emb|AL591478.19| Mouse DNA sequence from clone RP23-140D14 on ch... 40 5.0
87emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chro... 40 5.0 
>ref|XM_550632.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1679

 Score =  216 bits (109), Expect = 4e-53
 Identities = 208/241 (86%)
 Strand = Plus / Plus

                                                                       
Query: 130 cttcgacctccggatcgcctcgcggacgctggtccgggcctcgcgcccgccgccgggctc 189
           ||||||||||  ||||||||| |||  ||| |||||||| |||||||||||||| |||| 
Sbjct: 84  cttcgacctcgagatcgcctcccgggagcttgtccgggcgtcgcgcccgccgccaggctt 143

                                                                       
Query: 190 ccccgccgtgcacgccgtctccaacctcgacctcgtcctcggccccttcccgctctacct 249
           |||  |||| | ||||||||||||||| |||||| ||||||||||||||||  |||||||
Sbjct: 144 cccgcccgtcctcgccgtctccaaccttgacctcatcctcggccccttccccatctacct 203

                                                                       
Query: 250 catctgcgtgtacgcgcccccgccgtgcggcctcggcacggtgctctccgccgtccgcgc 309
           | ||| ||| ||||| ||||||||| ||||| ||| | | ||| | ||||||||||||||
Sbjct: 204 cgtctccgtctacgctcccccgccgggcggcgtcgccgccgtggtgtccgccgtccgcgc 263

                                                                       
Query: 310 cgcgctcccgggctacctctcccgcttcttccccttcgccggccgcatcgtgcgcgaccc 369
           |||||||||||  |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 264 cgcgctcccggcgtacctctcccacttcttccccttcgccggccgcgtcgtgcgggaccc 323

            
Query: 370 g 370
           |
Sbjct: 324 g 324
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>ref|XM_550633.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1732

 Score =  216 bits (109), Expect = 4e-53
 Identities = 208/241 (86%)
 Strand = Plus / Minus

                                                                        
Query: 130  cttcgacctccggatcgcctcgcggacgctggtccgggcctcgcgcccgccgccgggctc 189
            ||||||||||  ||||||||| |||  ||| |||||||| |||||||||||||| |||| 
Sbjct: 1404 cttcgacctcgagatcgcctcccgggagcttgtccgggcgtcgcgcccgccgccaggctt 1345

                                                                        
Query: 190  ccccgccgtgcacgccgtctccaacctcgacctcgtcctcggccccttcccgctctacct 249
            |||  |||| | ||||||||||||||| |||||| ||||||||||||||||  |||||||
Sbjct: 1344 cccgcccgtcctcgccgtctccaaccttgacctcatcctcggccccttccccatctacct 1285

                                                                        
Query: 250  catctgcgtgtacgcgcccccgccgtgcggcctcggcacggtgctctccgccgtccgcgc 309
            | ||| ||| ||||| ||||||||| ||||| ||| | | ||| | ||||||||||||||
Sbjct: 1284 cgtctccgtctacgctcccccgccgggcggcgtcgccgccgtggtgtccgccgtccgcgc 1225

                                                                        
Query: 310  cgcgctcccgggctacctctcccgcttcttccccttcgccggccgcatcgtgcgcgaccc 369
            |||||||||||  |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 1224 cgcgctcccggcgtacctctcccacttcttccccttcgccggccgcgtcgtgcgggaccc 1165

             
Query: 370  g 370
            |
Sbjct: 1164 g 1164
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  216 bits (109), Expect = 4e-53
 Identities = 208/241 (86%)
 Strand = Plus / Plus

                                                                           
Query: 130     cttcgacctccggatcgcctcgcggacgctggtccgggcctcgcgcccgccgccgggctc 189
               ||||||||||  ||||||||| |||  ||| |||||||| |||||||||||||| |||| 
Sbjct: 2591875 cttcgacctcgagatcgcctcccgggagcttgtccgggcgtcgcgcccgccgccaggctt 2591934

                                                                           
Query: 190     ccccgccgtgcacgccgtctccaacctcgacctcgtcctcggccccttcccgctctacct 249
               |||  |||| | ||||||||||||||| |||||| ||||||||||||||||  |||||||
Sbjct: 2591935 cccgcccgtcctcgccgtctccaaccttgacctcatcctcggccccttccccatctacct 2591994

                                                                           
Query: 250     catctgcgtgtacgcgcccccgccgtgcggcctcggcacggtgctctccgccgtccgcgc 309
               | ||| ||| ||||| ||||||||| ||||| ||| | | ||| | ||||||||||||||
Sbjct: 2591995 cgtctccgtctacgctcccccgccgggcggcgtcgccgccgtggtgtccgccgtccgcgc 2592054

                                                                           
Query: 310     cgcgctcccgggctacctctcccgcttcttccccttcgccggccgcatcgtgcgcgaccc 369
               |||||||||||  |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 2592055 cgcgctcccggcgtacctctcccacttcttccccttcgccggccgcgtcgtgcgggaccc 2592114

                
Query: 370     g 370
               |
Sbjct: 2592115 g 2592115



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                           
Query: 152     cggacgctggtccgggcctcgcgcccgccgccgggctcccccgccgtgcacgccgtctcc 211
               |||||| |||||||||| ||   |||||||||||||| ||||||||||| | ||||||||
Sbjct: 2634117 cggacgttggtccgggcgtccgacccgccgccgggcttccccgccgtgctccccgtctcc 2634058

                                          
Query: 212     aacctcgacctcgtcctcggccccttc 238
               |||||||||||| |||||||| |||||
Sbjct: 2634057 aacctcgacctcatcctcggctccttc 2634031



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                    
Query: 325     cctctcccgcttcttccccttcgccggccgcatcgtg 361
               ||||||||||||||||||||||||||||||| |||||
Sbjct: 2633944 cctctcccgcttcttccccttcgccggccgcgtcgtg 2633908



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 235     cttcccgctctacctcatct 254
               ||||||||||||||||||||
Sbjct: 7260085 cttcccgctctacctcatct 7260104
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>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0710H01
          Length = 187107

 Score =  216 bits (109), Expect = 4e-53
 Identities = 208/241 (86%)
 Strand = Plus / Plus

                                                                         
Query: 130   cttcgacctccggatcgcctcgcggacgctggtccgggcctcgcgcccgccgccgggctc 189
             ||||||||||  ||||||||| |||  ||| |||||||| |||||||||||||| |||| 
Sbjct: 47216 cttcgacctcgagatcgcctcccgggagcttgtccgggcgtcgcgcccgccgccaggctt 47275

                                                                         
Query: 190   ccccgccgtgcacgccgtctccaacctcgacctcgtcctcggccccttcccgctctacct 249
             |||  |||| | ||||||||||||||| |||||| ||||||||||||||||  |||||||
Sbjct: 47276 cccgcccgtcctcgccgtctccaaccttgacctcatcctcggccccttccccatctacct 47335

                                                                         
Query: 250   catctgcgtgtacgcgcccccgccgtgcggcctcggcacggtgctctccgccgtccgcgc 309
             | ||| ||| ||||| ||||||||| ||||| ||| | | ||| | ||||||||||||||
Sbjct: 47336 cgtctccgtctacgctcccccgccgggcggcgtcgccgccgtggtgtccgccgtccgcgc 47395

                                                                         
Query: 310   cgcgctcccgggctacctctcccgcttcttccccttcgccggccgcatcgtgcgcgaccc 369
             |||||||||||  |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 47396 cgcgctcccggcgtacctctcccacttcttccccttcgccggccgcgtcgtgcgggaccc 47455

              
Query: 370   g 370
             |
Sbjct: 47456 g 47456



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 152   cggacgctggtccgggcctcgcgcccgccgccgggctcccccgccgtgcacgccgtctcc 211
             |||||| |||||||||| ||   |||||||||||||| ||||||||||| | ||||||||
Sbjct: 89458 cggacgttggtccgggcgtccgacccgccgccgggcttccccgccgtgctccccgtctcc 89399

                                        
Query: 212   aacctcgacctcgtcctcggccccttc 238
             |||||||||||| |||||||| |||||
Sbjct: 89398 aacctcgacctcatcctcggctccttc 89372



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                  
Query: 325   cctctcccgcttcttccccttcgccggccgcatcgtg 361
             ||||||||||||||||||||||||||||||| |||||
Sbjct: 89285 cctctcccgcttcttccccttcgccggccgcgtcgtg 89249
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>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0529C07
          Length = 174011

 Score =  216 bits (109), Expect = 4e-53
 Identities = 208/241 (86%)
 Strand = Plus / Plus

                                                                        
Query: 130  cttcgacctccggatcgcctcgcggacgctggtccgggcctcgcgcccgccgccgggctc 189
            ||||||||||  ||||||||| |||  ||| |||||||| |||||||||||||| |||| 
Sbjct: 3622 cttcgacctcgagatcgcctcccgggagcttgtccgggcgtcgcgcccgccgccaggctt 3681

                                                                        
Query: 190  ccccgccgtgcacgccgtctccaacctcgacctcgtcctcggccccttcccgctctacct 249
            |||  |||| | ||||||||||||||| |||||| ||||||||||||||||  |||||||
Sbjct: 3682 cccgcccgtcctcgccgtctccaaccttgacctcatcctcggccccttccccatctacct 3741

                                                                        
Query: 250  catctgcgtgtacgcgcccccgccgtgcggcctcggcacggtgctctccgccgtccgcgc 309
            | ||| ||| ||||| ||||||||| ||||| ||| | | ||| | ||||||||||||||
Sbjct: 3742 cgtctccgtctacgctcccccgccgggcggcgtcgccgccgtggtgtccgccgtccgcgc 3801

                                                                        
Query: 310  cgcgctcccgggctacctctcccgcttcttccccttcgccggccgcatcgtgcgcgaccc 369
            |||||||||||  |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 3802 cgcgctcccggcgtacctctcccacttcttccccttcgccggccgcgtcgtgcgggaccc 3861

             
Query: 370  g 370
            |
Sbjct: 3862 g 3862



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 152   cggacgctggtccgggcctcgcgcccgccgccgggctcccccgccgtgcacgccgtctcc 211
             |||||| |||||||||| ||   |||||||||||||| ||||||||||| | ||||||||
Sbjct: 45864 cggacgttggtccgggcgtccgacccgccgccgggcttccccgccgtgctccccgtctcc 45805

                                        
Query: 212   aacctcgacctcgtcctcggccccttc 238
             |||||||||||| |||||||| |||||
Sbjct: 45804 aacctcgacctcatcctcggctccttc 45778



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                  
Query: 325   cctctcccgcttcttccccttcgccggccgcatcgtg 361
             ||||||||||||||||||||||||||||||| |||||
Sbjct: 45691 cctctcccgcttcttccccttcgccggccgcgtcgtg 45655
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>dbj|AK106314.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D09, full
            insert sequence
          Length = 1732

 Score =  216 bits (109), Expect = 4e-53
 Identities = 208/241 (86%)
 Strand = Plus / Minus

                                                                        
Query: 130  cttcgacctccggatcgcctcgcggacgctggtccgggcctcgcgcccgccgccgggctc 189
            ||||||||||  ||||||||| |||  ||| |||||||| |||||||||||||| |||| 
Sbjct: 1404 cttcgacctcgagatcgcctcccgggagcttgtccgggcgtcgcgcccgccgccaggctt 1345

                                                                        
Query: 190  ccccgccgtgcacgccgtctccaacctcgacctcgtcctcggccccttcccgctctacct 249
            |||  |||| | ||||||||||||||| |||||| ||||||||||||||||  |||||||
Sbjct: 1344 cccgcccgtcctcgccgtctccaaccttgacctcatcctcggccccttccccatctacct 1285

                                                                        
Query: 250  catctgcgtgtacgcgcccccgccgtgcggcctcggcacggtgctctccgccgtccgcgc 309
            | ||| ||| ||||| ||||||||| ||||| ||| | | ||| | ||||||||||||||
Sbjct: 1284 cgtctccgtctacgctcccccgccgggcggcgtcgccgccgtggtgtccgccgtccgcgc 1225

                                                                        
Query: 310  cgcgctcccgggctacctctcccgcttcttccccttcgccggccgcatcgtgcgcgaccc 369
            |||||||||||  |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 1224 cgcgctcccggcgtacctctcccacttcttccccttcgccggccgcgtcgtgcgggaccc 1165

             
Query: 370  g 370
            |
Sbjct: 1164 g 1164
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>dbj|AK063346.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-B08, full
           insert sequence
          Length = 1679

 Score =  216 bits (109), Expect = 4e-53
 Identities = 208/241 (86%)
 Strand = Plus / Plus

                                                                       
Query: 130 cttcgacctccggatcgcctcgcggacgctggtccgggcctcgcgcccgccgccgggctc 189
           ||||||||||  ||||||||| |||  ||| |||||||| |||||||||||||| |||| 
Sbjct: 84  cttcgacctcgagatcgcctcccgggagcttgtccgggcgtcgcgcccgccgccaggctt 143

                                                                       
Query: 190 ccccgccgtgcacgccgtctccaacctcgacctcgtcctcggccccttcccgctctacct 249
           |||  |||| | ||||||||||||||| |||||| ||||||||||||||||  |||||||
Sbjct: 144 cccgcccgtcctcgccgtctccaaccttgacctcatcctcggccccttccccatctacct 203

                                                                       
Query: 250 catctgcgtgtacgcgcccccgccgtgcggcctcggcacggtgctctccgccgtccgcgc 309
           | ||| ||| ||||| ||||||||| ||||| ||| | | ||| | ||||||||||||||
Sbjct: 204 cgtctccgtctacgctcccccgccgggcggcgtcgccgccgtggtgtccgccgtccgcgc 263

                                                                       
Query: 310 cgcgctcccgggctacctctcccgcttcttccccttcgccggccgcatcgtgcgcgaccc 369
           |||||||||||  |||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 264 cgcgctcccggcgtacctctcccacttcttccccttcgccggccgcgtcgtgcgggaccc 323

            
Query: 370 g 370
           |
Sbjct: 324 g 324
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>ref|XM_550642.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                       
Query: 152 cggacgctggtccgggcctcgcgcccgccgccgggctcccccgccgtgcacgccgtctcc 211
           |||||| |||||||||| ||   |||||||||||||| ||||||||||| | ||||||||
Sbjct: 52  cggacgttggtccgggcgtccgacccgccgccgggcttccccgccgtgctccccgtctcc 111

                                      
Query: 212 aacctcgacctcgtcctcggccccttc 238
           |||||||||||| |||||||| |||||
Sbjct: 112 aacctcgacctcatcctcggctccttc 138



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 325 cctctcccgcttcttccccttcgccggccgcatcgtg 361
           ||||||||||||||||||||||||||||||| |||||
Sbjct: 225 cctctcccgcttcttccccttcgccggccgcgtcgtg 261
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>ref|XM_529834.1| PREDICTED: Pan troglodytes LOC454599 (LOC454599), mRNA
          Length = 942

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 284 ggcacggtgctctccgccgtccgcgccgcgc 314
           |||||||||||  ||||||||||||||||||
Sbjct: 396 ggcacggtgctgcccgccgtccgcgccgcgc 366
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>ref|NM_187969.1| Oryza sativa (japonica cultivar-group), Ozsa8389 predicted mRNA
          Length = 1317

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 334 cttcttccccttcgccggccgcatcgt 360
           |||||||||||||||||||||| ||||
Sbjct: 183 cttcttccccttcgccggccgcgtcgt 209
to top
>gb|BC084573.1| Homo sapiens cDNA clone IMAGE:6576497
          Length = 1479

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 284 ggcacggtgctctccgccgtccgcgccgcgc 314
           |||||||||||  ||||||||||||||||||
Sbjct: 40  ggcacggtgctgcccgccgtccgcgccgcgc 10
to top
>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence
          Length = 135692

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 284   ggcacggtgctctccgccgtccgcgccgcgc 314
             |||||||||||  ||||||||||||||||||
Sbjct: 98414 ggcacggtgctgcccgccgtccgcgccgcgc 98384
to top
>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence
          Length = 181991

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 284  ggcacggtgctctccgccgtccgcgccgcgc 314
            |||||||||||  ||||||||||||||||||
Sbjct: 3533 ggcacggtgctgcccgccgtccgcgccgcgc 3503
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 334     cttcttccccttcgccggccgcatcgt 360
               |||||||||||||||||||||| ||||
Sbjct: 8854638 cttcttccccttcgccggccgcgtcgt 8854664



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 202     cgccgtctccaacctcgacctc 223
               ||||||||||||||||||||||
Sbjct: 8834669 cgccgtctccaacctcgacctc 8834690



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 202     cgccgtctccaacctcgacctc 223
               ||||||||||||||||||||||
Sbjct: 8827083 cgccgtctccaacctcgacctc 8827062



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 202     cgccgtctccaacctcgacctc 223
               ||||||||||||||||||||||
Sbjct: 8817223 cgccgtctccaacctcgacctc 8817202



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 214     cctcgacctcgtcctcggccccttcc 239
               ||||| ||||||||||||||||||||
Sbjct: 4061866 cctcgccctcgtcctcggccccttcc 4061841
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>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0469E09
          Length = 146081

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 334   cttcttccccttcgccggccgcatcgt 360
             |||||||||||||||||||||| ||||
Sbjct: 90666 cttcttccccttcgccggccgcgtcgt 90692



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 202   cgccgtctccaacctcgacctc 223
             ||||||||||||||||||||||
Sbjct: 70697 cgccgtctccaacctcgacctc 70718



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 202   cgccgtctccaacctcgacctc 223
             ||||||||||||||||||||||
Sbjct: 63111 cgccgtctccaacctcgacctc 63090



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 202   cgccgtctccaacctcgacctc 223
             ||||||||||||||||||||||
Sbjct: 53251 cgccgtctccaacctcgacctc 53230
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>emb|Z54703.1|HS156E9F H.sapiens CpG island DNA genomic Mse1 fragment, clone 156e9,
           forward read cpg156e9.ft1a
          Length = 250

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 284 ggcacggtgctctccgccgtccgcgccgcgc 314
           |||||||||||  ||||||||||||||||||
Sbjct: 175 ggcacggtgctgcccgccgtccgcgccgcgc 145
to top
>ref|XM_550377.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1666

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 214  cctcgacctcgtcctcggccccttcc 239
            ||||| ||||||||||||||||||||
Sbjct: 1344 cctcgccctcgtcctcggccccttcc 1319
to top
>ref|NM_187964.1| Oryza sativa (japonica cultivar-group), Ozsa8384 predicted mRNA
          Length = 1383

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 202 cgccgtctccaacctcgacctc 223
           ||||||||||||||||||||||
Sbjct: 96  cgccgtctccaacctcgacctc 117
to top
>ref|NM_187960.1| Oryza sativa (japonica cultivar-group), Ozsa8380 predicted mRNA
          Length = 1383

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 202 cgccgtctccaacctcgacctc 223
           ||||||||||||||||||||||
Sbjct: 96  cgccgtctccaacctcgacctc 117
to top
>ref|XM_479748.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1625

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 331 ccgcttcttccccttcgccggccgcatcgt 360
           |||||||| |||||||||||||||| ||||
Sbjct: 245 ccgcttctaccccttcgccggccgcctcgt 274
to top
>ref|NM_196696.1| Oryza sativa (japonica cultivar-group) putative metal-binding
           protein (OSJNBa0046P18.5), mRNA
          Length = 1080

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 307 cgccgcgctcccgggctacctc 328
           ||||||||||||||||||||||
Sbjct: 627 cgccgcgctcccgggctacctc 648
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 166     ggcctcgcgcccgccgccgggc 187
               ||||||||||||||||||||||
Sbjct: 1898574 ggcctcgcgcccgccgccgggc 1898595
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>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 217249

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 317    ccgggctacctctcccgcttcttccccttc 346
              |||||||||||||||||| || ||||||||
Sbjct: 114128 ccgggctacctctcccgcctcatccccttc 114157
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 307      cgccgcgctcccgggctacctc 328
                ||||||||||||||||||||||
Sbjct: 15313920 cgccgcgctcccgggctacctc 15313941



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 325      cctctcccgcttcttccccttcgccggc 352
                |||||||| |||| ||||||||||||||
Sbjct: 15211867 cctctccctcttcctccccttcgccggc 15211840



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 2       tctccatccttctccctccattct 25
               ||||||||||||||| ||||||||
Sbjct: 2261835 tctccatccttctccttccattct 2261812
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 331    ccgcttcttccccttcgccggccgcatcgt 360
              |||||||| |||||||||||||||| ||||
Sbjct: 650804 ccgcttctaccccttcgccggccgcctcgt 650775



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 331    ccgcttcttccccttcgccggccgc 355
              |||||||| ||||||||||||||||
Sbjct: 647717 ccgcttctaccccttcgccggccgc 647693
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 311      gcgctcccgggctacctctccc 332
                ||||||||||||||||||||||
Sbjct: 24207114 gcgctcccgggctacctctccc 24207093



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    cgccgtccgcgccgcgctcc 317
              ||||||||||||||||||||
Sbjct: 113210 cgccgtccgcgccgcgctcc 113191
to top
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18,
             complete sequence
          Length = 144720

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 307   cgccgcgctcccgggctacctc 328
             ||||||||||||||||||||||
Sbjct: 31283 cgccgcgctcccgggctacctc 31304
to top
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 214   cctcgacctcgtcctcggccccttcc 239
             ||||| ||||||||||||||||||||
Sbjct: 28609 cctcgccctcgtcctcggccccttcc 28584
to top
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0699D11
          Length = 140825

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 202    cgccgtctccaacctcgacctc 223
              ||||||||||||||||||||||
Sbjct: 134680 cgccgtctccaacctcgacctc 134659
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0406H10
          Length = 156419

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 214  cctcgacctcgtcctcggccccttcc 239
            ||||| ||||||||||||||||||||
Sbjct: 8837 cctcgccctcgtcctcggccccttcc 8812
to top
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ2055_H10
          Length = 119290

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 311  gcgctcccgggctacctctccc 332
            ||||||||||||||||||||||
Sbjct: 7502 gcgctcccgggctacctctccc 7481
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 311    gcgctcccgggctacctctccc 332
              ||||||||||||||||||||||
Sbjct: 165855 gcgctcccgggctacctctccc 165834
to top
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0498H04
          Length = 151046

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 331   ccgcttcttccccttcgccggccgcatcgt 360
             |||||||| |||||||||||||||| ||||
Sbjct: 78182 ccgcttctaccccttcgccggccgcctcgt 78153



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 331   ccgcttcttccccttcgccggccgc 355
             |||||||| ||||||||||||||||
Sbjct: 75095 ccgcttctaccccttcgccggccgc 75071
to top
>dbj|AK122048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114C24, full
            insert sequence
          Length = 1668

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 214  cctcgacctcgtcctcggccccttcc 239
            ||||| ||||||||||||||||||||
Sbjct: 1345 cctcgccctcgtcctcggccccttcc 1320
to top
>dbj|AK070381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054J24, full
           insert sequence
          Length = 1624

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 331 ccgcttcttccccttcgccggccgcatcgt 360
           |||||||| |||||||||||||||| ||||
Sbjct: 243 ccgcttctaccccttcgccggccgcctcgt 272
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 307      cgccgcgctcccgggctacctc 328
                ||||||||||||||||||||||
Sbjct: 15322161 cgccgcgctcccgggctacctc 15322182



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 325      cctctcccgcttcttccccttcgccggc 352
                |||||||| |||| ||||||||||||||
Sbjct: 15220108 cctctccctcttcctccccttcgccggc 15220081



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 2       tctccatccttctccctccattct 25
               ||||||||||||||| ||||||||
Sbjct: 2261786 tctccatccttctccttccattct 2261763
to top
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 166   ggcctcgcgcccgccgccgggctcc 190
             |||||||||||||||||||| ||||
Sbjct: 12526 ggcctcgcgcccgccgccggtctcc 12502
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 202     cgccgtctccaacctcgacct 222
               |||||||||||||||||||||
Sbjct: 8091193 cgccgtctccaacctcgacct 8091213
to top
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_C08
          Length = 117923

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   cgccgtctccaacctcgacct 222
             |||||||||||||||||||||
Sbjct: 24965 cgccgtctccaacctcgacct 24985
to top
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete
             sequence
          Length = 231197

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 325   cctctcccgcttcttcccctt 345
             |||||||||||||||||||||
Sbjct: 91521 cctctcccgcttcttcccctt 91501
to top
>ref|XM_463783.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 885

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 cgccgtccgcgccgcgctcc 317
           ||||||||||||||||||||
Sbjct: 441 cgccgtccgcgccgcgctcc 460
to top
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 176   ccgccgccgggctcccccgccgtgcacg 203
             ||||||||||||| ||| ||||||||||
Sbjct: 75949 ccgccgccgggctacccggccgtgcacg 75976
to top
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 323    tacctctcccgcttcttccccttcgccg 350
              ||||||||| ||||| ||||||||||||
Sbjct: 126610 tacctctccagcttcatccccttcgccg 126637
to top
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 2      tctccatccttctccctccattct 25
              ||||||||||||||||||| ||||
Sbjct: 159862 tctccatccttctccctcccttct 159839
to top
>gb|AY216939.1| Plasmodium vivax strain Belem YAC1H14-like sequence
          Length = 101016

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   acctctcccgcttcttcccc 343
             ||||||||||||||||||||
Sbjct: 18540 acctctcccgcttcttcccc 18521
to top
>gb|AY216938.1| Plasmodium vivax strain IndiaVII YAC1H14-like sequence
          Length = 101158

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   acctctcccgcttcttcccc 343
             ||||||||||||||||||||
Sbjct: 18632 acctctcccgcttcttcccc 18613
to top
>gb|AY216937.1| Plasmodium vivax strain Salvador I YAC1H14-like sequence
          Length = 101095

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   acctctcccgcttcttcccc 343
             ||||||||||||||||||||
Sbjct: 18540 acctctcccgcttcttcccc 18521
to top
>gb|AY216936.1| Plasmodium vivax strain Thai-NYU YAC1H14-like sequence
          Length = 101002

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   acctctcccgcttcttcccc 343
             ||||||||||||||||||||
Sbjct: 18538 acctctcccgcttcttcccc 18519
to top
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster,
             complete sequence
          Length = 135638

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   gtccgggcctcgcgcccgccgccg 184
             |||||||||||||| |||||||||
Sbjct: 77011 gtccgggcctcgcgaccgccgccg 77034
to top
>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0088K21, complete sequence
          Length = 153239

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ccaacctcgacctcgtcctc 229
             ||||||||||||||||||||
Sbjct: 34335 ccaacctcgacctcgtcctc 34354
to top
>ref|XM_570774.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNE00600) partial mRNA
          Length = 897

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 2   tctccatccttctccctccattct 25
           ||||||||||||||||||| ||||
Sbjct: 547 tctccatccttctccctcccttct 570
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 164     cgggcctcgcgcccgccgcc 183
               ||||||||||||||||||||
Sbjct: 3539441 cgggcctcgcgcccgccgcc 3539460
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 101  ctcgtgggcgaaatggcgccgctc 124
            ||||||| ||||||||||||||||
Sbjct: 1513 ctcgtggtcgaaatggcgccgctc 1536
to top
>emb|AL078583.15|HSJ119H20 Human DNA sequence from clone RP1-119H20 on chromosome 6q25.3-27
             Contains a CpG island, complete sequence
          Length = 128710

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tccttctccctccattcttc 27
             ||||||||||||||||||||
Sbjct: 86802 tccttctccctccattcttc 86783
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 2       tctccatccttctccctccattct 25
               ||||||||||||||| ||||||||
Sbjct: 2261835 tctccatccttctccttccattct 2261812
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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ctcgcgcccgccgccgggct 188
              ||||||||||||||||||||
Sbjct: 116155 ctcgcgcccgccgccgggct 116174
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>emb|AL732570.12| Mouse DNA sequence from clone RP23-464J2 on chromosome 11 Contains the
             gene for a novel protein (C630032K07Rik), a novel gene,
             the 3' end of the gene for a novel protein (1700019F09Rik)
             and a CpG island, complete sequence
          Length = 102563

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gcgcccgccgccgggctccc 191
             ||||||||||||||||||||
Sbjct: 75205 gcgcccgccgccgggctccc 75224
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 201    acgccgtctccaacctcgacctcg 224
              ||||||| ||||||||||||||||
Sbjct: 174154 acgccgtgtccaacctcgacctcg 174177
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>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17,
             complete sequence
          Length = 141041

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 325   cctctcccgcttcttccccttcgccggc 352
             |||||||| |||| ||||||||||||||
Sbjct: 65566 cctctccctcttcctccccttcgccggc 65539
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>dbj|AK133343.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932437I02 product:unclassifiable, full
           insert sequence
          Length = 3558

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   atctccatccttctccctcc 20
           ||||||||||||||||||||
Sbjct: 496 atctccatccttctccctcc 477
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>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence
          Length = 156654

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     tctccatccttctccctccattct 25
             ||||||||||||||| ||||||||
Sbjct: 87489 tctccatccttctccttccattct 87466
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>gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence
          Length = 199866

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   acctctcccgcttcttcccc 343
             ||||||||||||||||||||
Sbjct: 64804 acctctcccgcttcttcccc 64785
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>gb|AC153762.3| Loxodonta africana clone VMRC15-159I7, complete sequence
          Length = 140444

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   gcctcgcgcccgccgccgggctcc 190
             ||||||||||| ||||||||||||
Sbjct: 52619 gcctcgcgccctccgccgggctcc 52596
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>tpg|BK000295.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M15, complete sequence
          Length = 1098

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 2   tctccatccttctccctccattct 25
           ||||||||||||||| ||||||||
Sbjct: 825 tctccatccttctccttccattct 802
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     cccgctctacctcatctgcg 257
               ||||||||||||||||||||
Sbjct: 2046203 cccgctctacctcatctgcg 2046222
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>gb|BC014752.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7,
           mRNA (cDNA clone IMAGE:4218885), with apparent retained
           intron
          Length = 1572

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ctccgccgtccgcgccgcgc 314
           ||||||||||||||||||||
Sbjct: 401 ctccgccgtccgcgccgcgc 382
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>dbj|AK043616.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830012H03 product:RIKEN cDNA
           9130017K11 gene, full insert sequence
          Length = 3339

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 gcgcccgccgccgggctccc 191
           ||||||||||||||||||||
Sbjct: 741 gcgcccgccgccgggctccc 760
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 210      ccaacctcgacctcgtcctc 229
                ||||||||||||||||||||
Sbjct: 22774618 ccaacctcgacctcgtcctc 22774637
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 323      tacctctcccgcttcttccccttcgccg 350
                ||||||||| ||||| ||||||||||||
Sbjct: 19195714 tacctctccagcttcatccccttcgccg 19195741
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>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11,
              complete sequence
          Length = 129420

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 325    cctctcccgcttcttccccttcgccggc 352
              |||||||| |||| ||||||||||||||
Sbjct: 120480 cctctccctcttcctccccttcgccggc 120453
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>gb|AF263457.1|AF263457 Zea mays SCARECROW (SCR) gene, complete cds
          Length = 3100

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  gccgccgggctcccccgccg 197
            ||||||||||||||||||||
Sbjct: 1086 gccgccgggctcccccgccg 1105
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    ctcggcacggtgctctccgc 300
              ||||||||||||||||||||
Sbjct: 488177 ctcggcacggtgctctccgc 488196
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 167     gcctcgcgcccgccgccggg 186
               ||||||||||||||||||||
Sbjct: 4046708 gcctcgcgcccgccgccggg 4046727
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>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0068B06
          Length = 143712

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    cttcccgctctacctcatct 254
              ||||||||||||||||||||
Sbjct: 137496 cttcccgctctacctcatct 137515
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>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0052G07
          Length = 156207

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   cttcccgctctacctcatct 254
             ||||||||||||||||||||
Sbjct: 95089 cttcccgctctacctcatct 95108
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>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1370C05
          Length = 148271

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    cgccgtccgcgccgcgctcc 317
              ||||||||||||||||||||
Sbjct: 107819 cgccgtccgcgccgcgctcc 107800
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>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1435_F07
          Length = 139041

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   cgccgtccgcgccgcgctcc 317
             ||||||||||||||||||||
Sbjct: 62237 cgccgtccgcgccgcgctcc 62218
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>dbj|AK106831.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F09, full
           insert sequence
          Length = 2329

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 ccaacctcgacctcgtcctc 229
           ||||||||||||||||||||
Sbjct: 383 ccaacctcgacctcgtcctc 402
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>dbj|AK100567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104M20, full
           insert sequence
          Length = 2127

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 ccaacctcgacctcgtcctc 229
           ||||||||||||||||||||
Sbjct: 371 ccaacctcgacctcgtcctc 390
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>dbj|AK068607.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157O06, full
           insert sequence
          Length = 1890

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 323 tacctctcccgcttcttccccttcgccg 350
           ||||||||| ||||| ||||||||||||
Sbjct: 144 tacctctccagcttcatccccttcgccg 117
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    cgcctcgcggacgctggtccgggc 168
              |||||||||||||| |||||||||
Sbjct: 549307 cgcctcgcggacgccggtccgggc 549284
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>dbj|AK064959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A13, full
           insert sequence
          Length = 1765

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 cttcccgctctacctcatct 254
           ||||||||||||||||||||
Sbjct: 391 cttcccgctctacctcatct 410
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>gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, complete sequence
          Length = 205564

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    cgcccgccgccgggctcccc 192
              ||||||||||||||||||||
Sbjct: 126311 cgcccgccgccgggctcccc 126330
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    tgctctccgccgtccgcgcc 310
              ||||||||||||||||||||
Sbjct: 397697 tgctctccgccgtccgcgcc 397716
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 210      ccaacctcgacctcgtcctc 229
                ||||||||||||||||||||
Sbjct: 23084528 ccaacctcgacctcgtcctc 23084547
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>emb|AL591478.19| Mouse DNA sequence from clone RP23-140D14 on chromosome 2, complete
             sequence
          Length = 236979

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atctccatccttctccctcc 20
             ||||||||||||||||||||
Sbjct: 22541 atctccatccttctccctcc 22560
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>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete
              sequence
          Length = 193057

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    ctccgccgtccgcgccgcgc 314
              ||||||||||||||||||||
Sbjct: 162869 ctccgccgtccgcgccgcgc 162888


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,247,898
Number of Sequences: 3902068
Number of extensions: 2247898
Number of successful extensions: 60204
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58065
Number of HSP's gapped (non-prelim): 2139
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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