ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet95f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetati... 125 5e-29
2VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetati... 124 1e-28
3S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetati... 117 1e-26
4PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (A... 112 4e-25
5VSP1_ARATH (O49195) Vegetative storage protein 1 precursor 103 1e-22
6VSP2_ARATH (O82122) Vegetative storage protein 2 precursor 98 1e-20
7PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein ... 32 0.53
8AAD6_YEAST (P43547) Putative aryl-alcohol dehydrogenase AAD6 (EC... 31 1.6
9YIEC_ECOLI (P26218) Putative outer membrane protein yieC precursor 29 4.5
10NODJ_AZOCA (Q07757) Nodulation protein J 29 5.9
11FEN_METAC (Q8TIY5) Flap structure-specific endonuclease (EC 3.1.... 28 7.7

>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage|
           protein A)
          Length = 254

 Score =  125 bits (314), Expect = 5e-29
 Identities = 66/123 (53%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = +3

Query: 3   TSFDAYVLEGSAPALPETKRLYYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSGWMN 182
           T +D +V +G+APALPET + Y KL+ +G K +F++GRT DK+AVT  NL+  G+  W  
Sbjct: 131 TLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHTWEK 190

Query: 183 LTLK--QHGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEG-ARTFKLPDPI 353
           L LK  Q     +A+SYK+A R+KL   GY IVG IGDQWSD+LG   G +RTFKLP+P+
Sbjct: 191 LILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLPNPL 250

Query: 354 YYI 362
           YYI
Sbjct: 251 YYI 253



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>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage|
           protein B)
          Length = 254

 Score =  124 bits (310), Expect = 1e-28
 Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   TSFDAYVLEGSAPALPETKRLYYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSGWMN 182
           T +D +V +G APALPET + Y KLL +G K VF++GR  DK AVT  NL+  GF  W  
Sbjct: 132 TLYDEWVNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHTWEQ 191

Query: 183 LTLKQ-HGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEG-ARTFKLPDPIY 356
           L LK  H    +A+SYKSA R+ L   GY IVG IGDQWSD+LG   G +RTFKLP+P+Y
Sbjct: 192 LILKDPHLITPNALSYKSAMRENLLRQGYRIVGIIGDQWSDLLGDHRGESRTFKLPNPMY 251

Query: 357 YI 362
           YI
Sbjct: 252 YI 253



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>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage|
           protein VSP25) (Fragment)
          Length = 291

 Score =  117 bits (294), Expect = 1e-26
 Identities = 63/119 (52%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
 Frame = +3

Query: 3   TSFDAYVLEGSAPALPETKRLYYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSGWMN 182
           T +D +V +G+APALPET + Y KL+ +G K +F++GRT DK+AVT  NL+  G+  W  
Sbjct: 128 TLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHTWEK 187

Query: 183 LTLK--QHGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEG-ARTFKLPDP 350
           L LK  Q     +A+SYK+A R+KL   GY IVG IGDQWSD+LG   G +RTFKLP+P
Sbjct: 188 LILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLPNP 246



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>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))|
          Length = 255

 Score =  112 bits (280), Expect = 4e-25
 Identities = 57/119 (47%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
 Frame = +3

Query: 9   FDAYVLEGSAPALPETKRLYYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSGWMNLT 188
           FD +V  G+APAL  + +LY ++LK+G K   +TGR+E  R+VTV NL + GF  W  L 
Sbjct: 136 FDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLI 195

Query: 189 LKQHGFKG-SAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEGARTFKLPDPIYYI 362
           L+     G +A +YKS  R  + + G+ IVGN GDQWSD+LG+    R+FKLP+P+YYI
Sbjct: 196 LRGSDDHGKTATTYKSERRNAMVEEGFRIVGNSGDQWSDLLGSSMSYRSFKLPNPMYYI 254



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>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor|
          Length = 270

 Score =  103 bits (258), Expect = 1e-22
 Identities = 51/110 (46%), Positives = 72/110 (65%)
 Frame = +3

Query: 33  SAPALPETKRLYYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSGWMNLTLKQHGFKG 212
           S P LPET  LY  LL++GI+P+ I+ R +    +T+ NL++ G + W +L LK +G K 
Sbjct: 160 STPGLPETLHLYENLLELGIEPIIISDRWKKLSEITIENLKAVGVTKWKHLILKPNGSKL 219

Query: 213 SAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEGARTFKLPDPIYYI 362
           + + YKS  R  L   GY IVGNIGDQW+D++    G R FKLP+P+YY+
Sbjct: 220 TQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 268



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>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor|
          Length = 265

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 48/110 (43%), Positives = 70/110 (63%)
 Frame = +3

Query: 33  SAPALPETKRLYYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSGWMNLTLKQHGFKG 212
           S P LPE   LY  ++++GI+P+ ++ R +  + VT+ NL + G + W +L LK +G   
Sbjct: 155 STPGLPEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNL 214

Query: 213 SAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEGARTFKLPDPIYYI 362
             + YKS  RK L   GY IVGNIGDQW+D++    G R FKLP+P+YY+
Sbjct: 215 RQVVYKSKVRKSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 263



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>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor|
           (PRP-1/PRP-2) (Parotid proline-rich protein 1/2)
           (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa)
           (Parotid isoelectric focusing variant protein) (PIF-S)
           (Parotid double-band
          Length = 166

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 80  QGGHQAGVHHRPDGG-QEGRHRREPPQPGLLRVDEPDAQAARIQG 211
           QGGH      RP G  Q+G H++ PP P   +   P  Q  R QG
Sbjct: 114 QGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQG 158



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>AAD6_YEAST (P43547) Putative aryl-alcohol dehydrogenase AAD6 (EC 1.1.1.-)|
          Length = 212

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 279 NIGDQWSDILGAPEGARTFKLPDPIY 356
           +IGD WS+ILG+    R F+L D  Y
Sbjct: 38  SIGDAWSEILGSMSKERAFELLDAFY 63



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>YIEC_ECOLI (P26218) Putative outer membrane protein yieC precursor|
          Length = 538

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 141 VGNLRSQG--FSGWMNLTLKQHGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWS 299
           +G+L   G  +SGW +L LKQ  +          E  K  DA  ++ GN+G Q+S
Sbjct: 148 IGSLGRFGNEYSGWFDLQLKQRVYN---------ENGKRVDAVVMMDGNVGQQYS 193



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>NODJ_AZOCA (Q07757) Nodulation protein J|
          Length = 254

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 428 WSLIIIRGARAWGNQMAAADLGDVVNGVRQLEG 330
           W+ +  R A +W  +MAA+ LG V++ +  L G
Sbjct: 8   WAAVFQRNAMSWRREMAASVLGSVIDPLIMLFG 40



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>FEN_METAC (Q8TIY5) Flap structure-specific endonuclease (EC 3.1.-.-)|
          Length = 338

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
 Frame = +3

Query: 75  LLKVGIKPVFI-TGRTEDKRAVTVG---NLRSQGFSGWMNLTLKQHGFKGSAISYKSA-- 236
           L++ GIKPVFI  G+  D ++ T+     +R      W N   K  G   +A  Y  A  
Sbjct: 68  LVEAGIKPVFIFDGKPPDLKSETLSRRKEVRETSLEKWEN--AKAEGDLEAAYKYAQASS 125

Query: 237 --ERKKLQDAGYVIVGNIGDQW 296
             +++ ++D+ Y ++G +G  W
Sbjct: 126 RVDQEIVEDSKY-LLGIMGIPW 146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,859,123
Number of Sequences: 219361
Number of extensions: 950589
Number of successful extensions: 3341
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3328
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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