ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet95f09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 662 bits (334), Expect = 0.0 Identities = 397/418 (94%) Strand = Plus / Plus Query: 1 cgacgagcttcgacgcgtacgtgctggaggggagcgcgccggcgctgccggagacgaagc 60 ||||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||| Sbjct: 2250 cgacgagcttcgacgcgtacgtgatggaggggagtgcaccggtgctgccggagacgaagc 2309 Query: 61 ggctctactacaagctactcaaggtgggcatcaagccggtgttcatcacaggccggacgg 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2310 ggctctactacaagctactcaaggtgggcatcaagccggtattcatcacaggccggacgg 2369 Query: 121 aggacaagagggccgtcaccgtcgggaacctccgcagccagggcttctccgggtggatga 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2370 aggataagagggccgtcaccgtcgggaacctccgcagccagggcttctccgggtggatga 2429 Query: 181 acctgacgctcaagcagcacggattcaagggctccgccatatcctacaagtccgccgaga 240 ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct: 2430 gcctgacgctcaagcaacatgggttcaagggctccgccatatcctacaagtccgccgaga 2489 Query: 241 ggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 300 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2490 ggaagaagctggaggatgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 2549 Query: 301 acatcctcggcgcgcccgagggcgctcgcaccttcaagctgcctgaccccatttactaca 360 |||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| Sbjct: 2550 acatcctcggcgcgcccgagggcgctcgcaccttcagccggcctgaccccatgtactaca 2609 Query: 361 tcgcctaggtcggctgcggccatttggttgccccatgctcgtgctccacgaataataa 418 ||||||||||||| |||||| ||||| ||||||| |||||||| |||||||||||||| Sbjct: 2610 tcgcctaggtcggttgcggctatttgattgccccgtgctcgtggtccacgaataataa 2667
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 662 bits (334), Expect = 0.0 Identities = 397/418 (94%) Strand = Plus / Plus Query: 1 cgacgagcttcgacgcgtacgtgctggaggggagcgcgccggcgctgccggagacgaagc 60 ||||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||| Sbjct: 654 cgacgagcttcgacgcgtacgtgatggaggggagtgcaccggtgctgccggagacgaagc 713 Query: 61 ggctctactacaagctactcaaggtgggcatcaagccggtgttcatcacaggccggacgg 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 714 ggctctactacaagctactcaaggtgggcatcaagccggtattcatcacaggccggacgg 773 Query: 121 aggacaagagggccgtcaccgtcgggaacctccgcagccagggcttctccgggtggatga 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 aggataagagggccgtcaccgtcgggaacctccgcagccagggcttctccgggtggatga 833 Query: 181 acctgacgctcaagcagcacggattcaagggctccgccatatcctacaagtccgccgaga 240 ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct: 834 gcctgacgctcaagcaacatgggttcaagggctccgccatatcctacaagtccgccgaga 893 Query: 241 ggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 300 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 ggaagaagctggaggatgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 953 Query: 301 acatcctcggcgcgcccgagggcgctcgcaccttcaagctgcctgaccccatttactaca 360 |||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| Sbjct: 954 acatcctcggcgcgcccgagggcgctcgcaccttcagccggcctgaccccatgtactaca 1013 Query: 361 tcgcctaggtcggctgcggccatttggttgccccatgctcgtgctccacgaataataa 418 ||||||||||||| |||||| ||||| ||||||| |||||||| |||||||||||||| Sbjct: 1014 tcgcctaggtcggttgcggctatttgattgccccgtgctcgtggtccacgaataataa 1071
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 311 bits (157), Expect = 1e-81 Identities = 310/361 (85%) Strand = Plus / Plus Query: 1 cgacgagcttcgacgcgtacgtgctggaggggagcgcgccggcgctgccggagacgaagc 60 ||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||| ||| Sbjct: 175 cgacgagcttcaacgagtacgtgctggaggggagcgcgccggtgctcccggagacgcagc 234 Query: 61 ggctctactacaagctactcaaggtgggcatcaagccggtgttcatcacaggccggacgg 120 |||| | | | ||||| || | |||||||||||||||||||| | || ||||| || | Sbjct: 235 ggctgttcaagaagctcgtctcgctgggcatcaagccggtgttcctgacgggccgcaccg 294 Query: 121 aggacaagagggccgtcaccgtcgggaacctccgcagccagggcttctccgggtggatga 180 ||||| |||||||| |||||||| ||||||||| ||||||| | |||||| ||||||| Sbjct: 295 aggaccagagggccatcaccgtcaccaacctccgccgccaggggtactccggctggatga 354 Query: 181 acctgacgctcaagcagcacggattcaagggctccgccatatcctacaagtccgccgaga 240 ||| |||||||| ||| |||||| | ||||||| |||||||||||| |||| Sbjct: 355 cgctgctgctcaagcccgtcggcctcaaggccaccgccatcgcctacaagtccggcgagc 414 Query: 241 ggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 300 | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 gccagaagctccaggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 474 Query: 301 acatcctcggcgcgcccgagggcgctcgcaccttcaagctgcctgaccccatttactaca 360 |||||||||||||||| |||||||| |||||||||||||||||||||||| | ||||||| Sbjct: 475 acatcctcggcgcgccggagggcgcgcgcaccttcaagctgcctgaccccctctactaca 534 Query: 361 t 361 | Sbjct: 535 t 535
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 161 bits (81), Expect = 2e-36 Identities = 123/137 (89%) Strand = Plus / Minus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| || |||||||||||||||| || | | |||||||||| |||||| Sbjct: 80356 tacaagtccggcgagcggcagaagctgcaggacgctggcttcatcatcgtcgggaacatc 80297 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 80296 ggtgaccagtggagtgacatcctcggcgcgccggagggcgcccgcaccttcaagctgcct 80237 Query: 345 gaccccatttactacat 361 |||||| | |||||||| Sbjct: 80236 gaccccttatactacat 80220 Score = 143 bits (72), Expect = 6e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 227 caagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcgg 286 |||||||| |||| || |||||||| |||| ||||| | | ||||||||| |||||||| Sbjct: 89956 caagtccggcgagcggcagaagctggaggatgccggtttcaccatcgtcggtaacatcgg 89897 Query: 287 cgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcctga 346 ||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||| Sbjct: 89896 tgaccagtggagcgacatcctcggtgcgccggagggcgcccgcaccttcaagttgcctga 89837 Query: 347 ccccatttactacatcgcctaggt 370 |||| | |||||||||| |||||| Sbjct: 89836 ccccctgtactacatcggctaggt 89813 Score = 135 bits (68), Expect = 1e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 227 caagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcgg 286 |||||||| |||| || |||||||| |||| ||||| | | ||| ||||| |||||||| Sbjct: 90455 caagtccggcgagcggcagaagctggaggatgccggtttcaccattgtcggtaacatcgg 90396 Query: 287 cgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcctga 346 ||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||| Sbjct: 90395 tgaccagtggagcgacatcctcggtgcgccggagggcgcccgcaccttcaagttgcctga 90336 Query: 347 ccccatttactacatcgcctaggt 370 |||| | |||||||||| |||||| Sbjct: 90335 ccccctgtactacatcggctaggt 90312 Score = 99.6 bits (50), Expect = 7e-18 Identities = 122/146 (83%) Strand = Plus / Minus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| || | |||||| |||| ||||| | | |||| |||| ||||| Sbjct: 104342 tacaagtccggcgagcggcaaaagctggaggatgccggtttcaccatcctcggtaacatt 104283 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||| ||||| ||||||||||| | || |||||||| ||||||||||||||||| Sbjct: 104282 ggtgaccaatggagtgacatcctcggtacaccggagggcgcccgcaccttcaagctgccg 104223 Query: 345 gaccccatttactacatcgcctaggt 370 |||||||| |||||||||| |||||| Sbjct: 104222 gaccccatgtactacatcggctaggt 104197 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Minus Query: 27 gaggggagcgcgccggcgctgccggagacgaagcggctctactacaagctactcaaggtg 86 ||||||||||| ||||||||||| ||||||| | | || |||||| ||| || || | Sbjct: 80569 gaggggagcgcaccggcgctgccagagacgaggtgactgtactaccggctgcttgagctc 80510 Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcaccgtcggg 146 ||| |||||||||||||| | |||||||| || || ||| | ||| || |||||||| | Sbjct: 80509 ggcgtcaagccggtgttcctaacaggccgcaccgaagaccaaaggaccatcaccgtcacg 80450 Query: 147 aacctccgcagccagggcttctccgggtgg 176 ||||||| | | ||||| |||||||||||| Sbjct: 80449 aacctccaccgacagggattctccgggtgg 80420 Score = 60.0 bits (30), Expect = 6e-06 Identities = 120/150 (80%) Strand = Plus / Minus Query: 30 gggagcgcgccggcgctgccggagacgaagcggctctactacaagctactcaaggtgggc 89 |||||||||||||||||||||||||||| |||| | ||| ||| ||| || | ||| Sbjct: 104552 gggagcgcgccggcgctgccggagacgaggcggttgtaccggcggctgctccagctcggc 104493 Query: 90 atcaagccggtgttcatcacaggccggacggaggacaagagggccgtcaccgtcgggaac 149 |||||||||||||| | || ||||| || |||||| | ||| | |||||||| ||| Sbjct: 104492 gtcaagccggtgttcctgacgggccgcaccgaggaccaaaggaacatcaccgtcacaaac 104433 Query: 150 ctccgcagccagggcttctccgggtggatg 179 |||||| | ||||| | ||||||||||||| Sbjct: 104432 ctccgccggcagggatactccgggtggatg 104403 Score = 60.0 bits (30), Expect = 6e-06 Identities = 141/178 (79%) Strand = Plus / Minus Query: 18 tacgtgctggaggggagcgcgccggcgctgccggagacgaagcggctctactacaagcta 77 |||||| |||||||||||| || ||||||||||||||||| |||| | ||| ||| Sbjct: 90679 tacgtggtggaggggagcgggctggcgctgccggagacgaggcggttgtaccggcggctg 90620 Query: 78 ctcaaggtgggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtc 137 ||| || | ||| |||||||||||||| | ||| |||| || |||||| | ||| | || Sbjct: 90619 ctccagctcggcgtcaagccggtgttcttgacaagccgcaccgaggacgaaaggaacatc 90560 Query: 138 accgtcgggaacctccgcagccagggcttctccgggtggatgaacctgacgctcaagc 195 |||||| ||||| ||| | ||||| | ||||||||||||||| ||| |||||||| Sbjct: 90559 accgtcacaaaccttcgccggcagggatactccgggtggatgaagctgttgctcaagc 90502 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 cgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcgg 310 |||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 5360 cgccggctatgtcatcgtcggtaacatcggtgaccaatggagcgatatcctcgg 5307 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcacc 140 |||||||||||||||||| | || | ||| || |||||| |||||||||||||| Sbjct: 5530 ggcatcaagccggtgttcctgaccgaccgcaccgaggaccagagggccgtcacc 5477
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 161 bits (81), Expect = 2e-36 Identities = 123/137 (89%) Strand = Plus / Minus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| || |||||||||||||||| || | | |||||||||| |||||| Sbjct: 5547147 tacaagtccggcgagcggcagaagctgcaggacgctggcttcatcatcgtcgggaacatc 5547088 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 5547087 ggtgaccagtggagtgacatcctcggcgcgccggagggcgcccgcaccttcaagctgcct 5547028 Query: 345 gaccccatttactacat 361 |||||| | |||||||| Sbjct: 5547027 gaccccttatactacat 5547011 Score = 143 bits (72), Expect = 6e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 227 caagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcgg 286 |||||||| |||| || |||||||| |||| ||||| | | ||||||||| |||||||| Sbjct: 5556747 caagtccggcgagcggcagaagctggaggatgccggtttcaccatcgtcggtaacatcgg 5556688 Query: 287 cgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcctga 346 ||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||| Sbjct: 5556687 tgaccagtggagcgacatcctcggtgcgccggagggcgcccgcaccttcaagttgcctga 5556628 Query: 347 ccccatttactacatcgcctaggt 370 |||| | |||||||||| |||||| Sbjct: 5556627 ccccctgtactacatcggctaggt 5556604 Score = 135 bits (68), Expect = 1e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 227 caagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcgg 286 |||||||| |||| || |||||||| |||| ||||| | | ||| ||||| |||||||| Sbjct: 5557246 caagtccggcgagcggcagaagctggaggatgccggtttcaccattgtcggtaacatcgg 5557187 Query: 287 cgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcctga 346 ||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||| Sbjct: 5557186 tgaccagtggagcgacatcctcggtgcgccggagggcgcccgcaccttcaagttgcctga 5557127 Query: 347 ccccatttactacatcgcctaggt 370 |||| | |||||||||| |||||| Sbjct: 5557126 ccccctgtactacatcggctaggt 5557103 Score = 99.6 bits (50), Expect = 7e-18 Identities = 122/146 (83%) Strand = Plus / Minus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| || | |||||| |||| ||||| | | |||| |||| ||||| Sbjct: 5571133 tacaagtccggcgagcggcaaaagctggaggatgccggtttcaccatcctcggtaacatt 5571074 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||| ||||| ||||||||||| | || |||||||| ||||||||||||||||| Sbjct: 5571073 ggtgaccaatggagtgacatcctcggtacaccggagggcgcccgcaccttcaagctgccg 5571014 Query: 345 gaccccatttactacatcgcctaggt 370 |||||||| |||||||||| |||||| Sbjct: 5571013 gaccccatgtactacatcggctaggt 5570988 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 276 ggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttc 335 ||||||||||| |||||||||||| |||||||||| | ||| |||||| ||||| |||| Sbjct: 5459759 ggcaacatcggtgaccagtggagcaacatcctcggagggccagagggctgtcgcatcttc 5459700 Query: 336 aagctgcctgaccccatttactacatcgcctag 368 ||| ||| ||||||| |||||| |||||||| Sbjct: 5459699 aagtaccctaaccccatgtactacgtcgcctag 5459667 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Minus Query: 27 gaggggagcgcgccggcgctgccggagacgaagcggctctactacaagctactcaaggtg 86 ||||||||||| ||||||||||| ||||||| | | || |||||| ||| || || | Sbjct: 5547360 gaggggagcgcaccggcgctgccagagacgaggtgactgtactaccggctgcttgagctc 5547301 Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcaccgtcggg 146 ||| |||||||||||||| | |||||||| || || ||| | ||| || |||||||| | Sbjct: 5547300 ggcgtcaagccggtgttcctaacaggccgcaccgaagaccaaaggaccatcaccgtcacg 5547241 Query: 147 aacctccgcagccagggcttctccgggtgg 176 ||||||| | | ||||| |||||||||||| Sbjct: 5547240 aacctccaccgacagggattctccgggtgg 5547211 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 241 ggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 300 |||||||||| ||| ||||| || ||||| ||||||||||||| ||||||||||||| Sbjct: 5452416 ggaagaagctagtggatgccggctatgtcattatcggcaacatcggtgaccagtggagcg 5452357 Query: 301 acatcctc 308 |||||||| Sbjct: 5452356 acatcctc 5452349 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 273 gtcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacc 332 ||||| |||||||| ||||||||||||||| |||||||| || | | ||| || |||||| Sbjct: 5399462 gtcggtaacatcggtgaccagtggagcgacctcctcggcccggcggcgggagcccgcacc 5399403 Query: 333 ttcaagct 340 |||||||| Sbjct: 5399402 ttcaagct 5399395 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 268 tcatcgtcggcaacatcggcgaccagtggagcgacatcc 306 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 5416680 tcatcgtcggcaacattggcgaccagtggaacgacatcc 5416642 Score = 60.0 bits (30), Expect = 6e-06 Identities = 120/150 (80%) Strand = Plus / Minus Query: 30 gggagcgcgccggcgctgccggagacgaagcggctctactacaagctactcaaggtgggc 89 |||||||||||||||||||||||||||| |||| | ||| ||| ||| || | ||| Sbjct: 5571343 gggagcgcgccggcgctgccggagacgaggcggttgtaccggcggctgctccagctcggc 5571284 Query: 90 atcaagccggtgttcatcacaggccggacggaggacaagagggccgtcaccgtcgggaac 149 |||||||||||||| | || ||||| || |||||| | ||| | |||||||| ||| Sbjct: 5571283 gtcaagccggtgttcctgacgggccgcaccgaggaccaaaggaacatcaccgtcacaaac 5571224 Query: 150 ctccgcagccagggcttctccgggtggatg 179 |||||| | ||||| | ||||||||||||| Sbjct: 5571223 ctccgccggcagggatactccgggtggatg 5571194 Score = 60.0 bits (30), Expect = 6e-06 Identities = 141/178 (79%) Strand = Plus / Minus Query: 18 tacgtgctggaggggagcgcgccggcgctgccggagacgaagcggctctactacaagcta 77 |||||| |||||||||||| || ||||||||||||||||| |||| | ||| ||| Sbjct: 5557470 tacgtggtggaggggagcgggctggcgctgccggagacgaggcggttgtaccggcggctg 5557411 Query: 78 ctcaaggtgggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtc 137 ||| || | ||| |||||||||||||| | ||| |||| || |||||| | ||| | || Sbjct: 5557410 ctccagctcggcgtcaagccggtgttcttgacaagccgcaccgaggacgaaaggaacatc 5557351 Query: 138 accgtcgggaacctccgcagccagggcttctccgggtggatgaacctgacgctcaagc 195 |||||| ||||| ||| | ||||| | ||||||||||||||| ||| |||||||| Sbjct: 5557350 accgtcacaaaccttcgccggcagggatactccgggtggatgaagctgttgctcaagc 5557293 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 cgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcgg 310 |||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 5472151 cgccggctatgtcatcgtcggtaacatcggtgaccaatggagcgatatcctcgg 5472098 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcacc 140 |||||||||||||||||| | || | ||| || |||||| |||||||||||||| Sbjct: 5472321 ggcatcaagccggtgttcctgaccgaccgcaccgaggaccagagggccgtcacc 5472268 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 274 tcggcaacatcggcgaccagtggagcgac 302 ||||||||||||| ||||||||||||||| Sbjct: 5428979 tcggcaacatcggtgaccagtggagcgac 5428951
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 161 bits (81), Expect = 2e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| || |||||||||||||||| || | | |||||||||| |||||| Sbjct: 767 tacaagtccggcgagcggcagaagctgcaggacgctggcttcatcatcgtcgggaacatc 826 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 827 ggtgaccagtggagtgacatcctcggcgcgccggagggcgcccgcaccttcaagctgcct 886 Query: 345 gaccccatttactacat 361 |||||| | |||||||| Sbjct: 887 gaccccttatactacat 903 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Plus Query: 27 gaggggagcgcgccggcgctgccggagacgaagcggctctactacaagctactcaaggtg 86 ||||||||||| ||||||||||| ||||||| | | || |||||| ||| || || | Sbjct: 554 gaggggagcgcaccggcgctgccagagacgaggtgactgtactaccggctgcttgagctc 613 Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcaccgtcggg 146 ||| |||||||||||||| | |||||||| || || ||| | ||| || |||||||| | Sbjct: 614 ggcgtcaagccggtgttcctaacaggccgcaccgaagaccaaaggaccatcaccgtcacg 673 Query: 147 aacctccgcagccagggcttctccgggtgg 176 ||||||| | | ||||| |||||||||||| Sbjct: 674 aacctccaccgacagggattctccgggtgg 703
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 159 bits (80), Expect = 9e-36 Identities = 131/148 (88%) Strand = Plus / Plus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| | ||||||||||||||||||| | | |||||||||| |||||| Sbjct: 16055709 tacaagtccggcgagcgtcagaagctgcaggacgccggcttcatcatcgtcggtaacatc 16055768 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||||||||| |||||| | || || || ||||||||||||||||||||||||||| Sbjct: 16055769 ggagaccagtggagtgacatcttgggtgcaccggagggcgctcgcaccttcaagctgcct 16055828 Query: 345 gaccccatttactacatcgcctaggtcg 372 |||||||| |||||||||| |||||||| Sbjct: 16055829 gaccccatgtactacatcggctaggtcg 16055856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 27 gaggggagcgcgccggcgctgccggagacga 57 ||||||||||||||||||||||||||||||| Sbjct: 16055496 gaggggagcgcgccggcgctgccggagacga 16055526 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 gcgccggcgctgccggagacgaagcggc 63 |||||| |||||||||||||| |||||| Sbjct: 24124260 gcgccgccgctgccggagacggagcggc 24124233
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 159 bits (80), Expect = 9e-36 Identities = 131/148 (88%) Strand = Plus / Plus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| | ||||||||||||||||||| | | |||||||||| |||||| Sbjct: 26042 tacaagtccggcgagcgtcagaagctgcaggacgccggcttcatcatcgtcggtaacatc 26101 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||||||||| |||||| | || || || ||||||||||||||||||||||||||| Sbjct: 26102 ggagaccagtggagtgacatcttgggtgcaccggagggcgctcgcaccttcaagctgcct 26161 Query: 345 gaccccatttactacatcgcctaggtcg 372 |||||||| |||||||||| |||||||| Sbjct: 26162 gaccccatgtactacatcggctaggtcg 26189 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 27 gaggggagcgcgccggcgctgccggagacga 57 ||||||||||||||||||||||||||||||| Sbjct: 25829 gaggggagcgcgccggcgctgccggagacga 25859
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 159 bits (80), Expect = 9e-36 Identities = 131/148 (88%) Strand = Plus / Plus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| | ||||||||||||||||||| | | |||||||||| |||||| Sbjct: 137111 tacaagtccggcgagcgtcagaagctgcaggacgccggcttcatcatcgtcggtaacatc 137170 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||||||||| |||||| | || || || ||||||||||||||||||||||||||| Sbjct: 137171 ggagaccagtggagtgacatcttgggtgcaccggagggcgctcgcaccttcaagctgcct 137230 Query: 345 gaccccatttactacatcgcctaggtcg 372 |||||||| |||||||||| |||||||| Sbjct: 137231 gaccccatgtactacatcggctaggtcg 137258 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 27 gaggggagcgcgccggcgctgccggagacga 57 ||||||||||||||||||||||||||||||| Sbjct: 136898 gaggggagcgcgccggcgctgccggagacga 136928
>ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 151 bits (76), Expect = 2e-33 Identities = 127/144 (88%) Strand = Plus / Plus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| | ||||||||||||||||||| | | |||||||||| |||||| Sbjct: 268 tacaagtccggcgagcgtcagaagctgcaggacgccggcttcatcatcgtcggtaacatc 327 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||||||||| |||||| | || || || ||||||||||||||||||||||||||| Sbjct: 328 ggagaccagtggagtgacatcttgggtgcaccggagggcgctcgcaccttcaagctgcct 387 Query: 345 gaccccatttactacatcgcctag 368 |||||||| |||||||||| |||| Sbjct: 388 gaccccatgtactacatcggctag 411 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 27 gaggggagcgcgccggcgctgccggagacga 57 ||||||||||||||||||||||||||||||| Sbjct: 55 gaggggagcgcgccggcgctgccggagacga 85
>dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H02, full insert sequence Length = 1112 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 682 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 741 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 742 gccggagggc 751
>dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D12, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 682 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 741 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 742 gccggagggc 751
>dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H04, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 682 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 741 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 742 gccggagggc 751
>dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H12, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 682 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 741 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 742 gccggagggc 751
>dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A07, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 682 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 741 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 742 gccggagggc 751
>dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H06, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 682 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 741 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 742 gccggagggc 751
>dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F05, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 682 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 741 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 742 gccggagggc 751
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 99.6 bits (50), Expect = 7e-18 Identities = 122/146 (83%) Strand = Plus / Plus Query: 225 tacaagtccgccgagaggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatc 284 |||||||||| |||| || | |||||| |||| ||||| | | |||| |||| ||||| Sbjct: 741 tacaagtccggcgagcggcaaaagctggaggatgccggtttcaccatcctcggtaacatt 800 Query: 285 ggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttcaagctgcct 344 || ||||| ||||| ||||||||||| | || |||||||| ||||||||||||||||| Sbjct: 801 ggtgaccaatggagtgacatcctcggtacaccggagggcgcccgcaccttcaagctgccg 860 Query: 345 gaccccatttactacatcgcctaggt 370 |||||||| |||||||||| |||||| Sbjct: 861 gaccccatgtactacatcggctaggt 886 Score = 60.0 bits (30), Expect = 6e-06 Identities = 120/150 (80%) Strand = Plus / Plus Query: 30 gggagcgcgccggcgctgccggagacgaagcggctctactacaagctactcaaggtgggc 89 |||||||||||||||||||||||||||| |||| | ||| ||| ||| || | ||| Sbjct: 531 gggagcgcgccggcgctgccggagacgaggcggttgtaccggcggctgctccagctcggc 590 Query: 90 atcaagccggtgttcatcacaggccggacggaggacaagagggccgtcaccgtcgggaac 149 |||||||||||||| | || ||||| || |||||| | ||| | |||||||| ||| Sbjct: 591 gtcaagccggtgttcctgacgggccgcaccgaggaccaaaggaacatcaccgtcacaaac 650 Query: 150 ctccgcagccagggcttctccgggtggatg 179 |||||| | ||||| | ||||||||||||| Sbjct: 651 ctccgccggcagggatactccgggtggatg 680
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 32863 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 32804 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 32803 gccggagggc 32794 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 276 ggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttc 335 ||||||||||| |||||||||||| |||||||||| | ||| |||||| ||||| |||| Sbjct: 14090 ggcaacatcggtgaccagtggagcaacatcctcggagggccagagggctgtcgcatcttc 14031 Query: 336 aagctgcctgaccccatttactacatcgcctag 368 ||| ||| ||||||| |||||| |||||||| Sbjct: 14030 aagtaccctaaccccatgtactacgtcgcctag 13998 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 241 ggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 300 |||||||||| ||| ||||| || ||||| ||||||||||||| ||||||||||||| Sbjct: 6747 ggaagaagctagtggatgccggctatgtcattatcggcaacatcggtgaccagtggagcg 6688 Query: 301 acatcctc 308 |||||||| Sbjct: 6687 acatcctc 6680
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 254 ggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcggcgc 313 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 6483 ggacgccggctatgtcatcgtcggcaacatcggcgaccagtggaccgacatcctcggctc 6424 Query: 314 gcccgagggc 323 ||| |||||| Sbjct: 6423 gccggagggc 6414 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 cgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcgg 310 |||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 25591 cgccggctatgtcatcgtcggtaacatcggtgaccaatggagcgatatcctcgg 25538 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcacc 140 |||||||||||||||||| | || | ||| || |||||| |||||||||||||| Sbjct: 25761 ggcatcaagccggtgttcctgaccgaccgcaccgaggaccagagggccgtcacc 25708
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 276 ggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcaccttc 335 ||||||||||| |||||||||||| |||||||||| | ||| |||||| ||||| |||| Sbjct: 146433 ggcaacatcggtgaccagtggagcaacatcctcggagggccagagggctgtcgcatcttc 146374 Query: 336 aagctgcctgaccccatttactacatcgcctag 368 ||| ||| ||||||| |||||| |||||||| Sbjct: 146373 aagtaccctaaccccatgtactacgtcgcctag 146341 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 241 ggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 300 |||||||||| ||| ||||| || ||||| ||||||||||||| ||||||||||||| Sbjct: 139090 ggaagaagctagtggatgccggctatgtcattatcggcaacatcggtgaccagtggagcg 139031 Query: 301 acatcctc 308 |||||||| Sbjct: 139030 acatcctc 139023 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 273 gtcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacc 332 ||||| |||||||| ||||||||||||||| |||||||| || | | ||| || |||||| Sbjct: 86136 gtcggtaacatcggtgaccagtggagcgacctcctcggcccggcggcgggagcccgcacc 86077 Query: 333 ttcaagct 340 |||||||| Sbjct: 86076 ttcaagct 86069 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 268 tcatcgtcggcaacatcggcgaccagtggagcgacatcc 306 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 103354 tcatcgtcggcaacattggcgaccagtggaacgacatcc 103316 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 274 tcggcaacatcggcgaccagtggagcgac 302 ||||||||||||| ||||||||||||||| Sbjct: 115653 tcggcaacatcggtgaccagtggagcgac 115625
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 746 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 805 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 806 tcaagctgcc 815
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 4871506 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 4871447 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 4871446 tcaagctgcc 4871437
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 116155 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 116096 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 116095 tcaagctgcc 116086
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 769 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 828 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 829 tcaagctgcc 838
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 768 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 827 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 828 tcaagctgcc 837
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 769 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 828 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 829 tcaagctgcc 838
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 982 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 1041 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 1042 tcaagctgcc 1051
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 769 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 828 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 829 tcaagctgcc 838
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 274 tcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacct 333 ||||||||||||||||||||||||||||| | || ||| |||| |||||| || |||| Sbjct: 769 tcggcaacatcggcgaccagtggagcgacctgctgggctcgccggagggccgccggacct 828 Query: 334 tcaagctgcc 343 |||||||||| Sbjct: 829 tcaagctgcc 838
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 273 gtcggcaacatcggcgaccagtggagcgacatcctcggcgcgcccgagggcgctcgcacc 332 ||||| |||||||| ||||||||||||||| |||||||| || | | ||| || |||||| Sbjct: 84976 gtcggtaacatcggtgaccagtggagcgacctcctcggcccggcggcgggagcccgcacc 84917 Query: 333 ttcaagct 340 |||||||| Sbjct: 84916 ttcaagct 84909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 268 tcatcgtcggcaacatcggcgaccagtggagcgacatcc 306 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 102194 tcatcgtcggcaacattggcgaccagtggaacgacatcc 102156
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 241 ggaagaagctgcaggacgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcg 300 |||||||||| ||| ||||| || ||||| ||||||||||||| ||||||||||||| Sbjct: 693 ggaagaagctagtggatgccggctatgtcattatcggcaacatcggtgaccagtggagcg 752 Query: 301 acatcctc 308 |||||||| Sbjct: 753 acatcctc 760
>dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A08, full insert sequence Length = 1051 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 268 tcatcgtcggcaacatcggcgaccagtggagcgacatcc 306 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 704 tcatcgtcggcaacattggcgaccagtggaacgacatcc 742
>dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C10, full insert sequence Length = 1053 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 268 tcatcgtcggcaacatcggcgaccagtggagcgacatcc 306 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 706 tcatcgtcggcaacattggcgaccagtggaacgacatcc 744
>dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099D13, full insert sequence Length = 1059 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 268 tcatcgtcggcaacatcggcgaccagtggagcgacatcc 306 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 712 tcatcgtcggcaacattggcgaccagtggaacgacatcc 750
>dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A01, full insert sequence Length = 1074 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 268 tcatcgtcggcaacatcggcgaccagtggagcgacatcc 306 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 705 tcatcgtcggcaacattggcgaccagtggaacgacatcc 743
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 257 cgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcgg 310 |||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 733 cgccggctatgtcatcgtcggtaacatcggtgaccaatggagcgatatcctcgg 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcacc 140 |||||||||||||||||| | || | ||| || |||||| |||||||||||||| Sbjct: 563 ggcatcaagccggtgttcctgaccgaccgcaccgaggaccagagggccgtcacc 616
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 257 cgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcgg 310 |||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 733 cgccggctatgtcatcgtcggtaacatcggtgaccaatggagcgatatcctcgg 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcacc 140 |||||||||||||||||| | || | ||| || |||||| |||||||||||||| Sbjct: 563 ggcatcaagccggtgttcctgaccgaccgcaccgaggaccagagggccgtcacc 616
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 257 cgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcgg 310 |||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 733 cgccggctatgtcatcgtcggtaacatcggtgaccaatggagcgatatcctcgg 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcacc 140 |||||||||||||||||| | || | ||| || |||||| |||||||||||||| Sbjct: 563 ggcatcaagccggtgttcctgaccgaccgcaccgaggaccagagggccgtcacc 616
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 257 cgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcgg 310 |||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 733 cgccggctatgtcatcgtcggtaacatcggtgaccaatggagcgatatcctcgg 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcacc 140 |||||||||||||||||| | || | ||| || |||||| |||||||||||||| Sbjct: 563 ggcatcaagccggtgttcctgaccgaccgcaccgaggaccagagggccgtcacc 616
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 257 cgccgggtacgtcatcgtcggcaacatcggcgaccagtggagcgacatcctcgg 310 |||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 733 cgccggctatgtcatcgtcggtaacatcggtgaccaatggagcgatatcctcgg 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 87 ggcatcaagccggtgttcatcacaggccggacggaggacaagagggccgtcacc 140 |||||||||||||||||| | || | ||| || |||||| |||||||||||||| Sbjct: 563 ggcatcaagccggtgttcctgaccgaccgcaccgaggaccagagggccgtcacc 616
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 275 cggcaacatcggcgaccagtggagcgac 302 ||||||| |||||||||||||||||||| Sbjct: 12244779 cggcaacgtcggcgaccagtggagcgac 12244752
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 275 cggcaacatcggcgaccagtggagcgac 302 ||||||| |||||||||||||||||||| Sbjct: 12241542 cggcaacgtcggcgaccagtggagcgac 12241515
>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds Length = 2310 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 275 cggcaacatcggcgaccagtggagcgac 302 ||||||| |||||||||||||||||||| Sbjct: 67 cggcaacgtcggcgaccagtggagcgac 94
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 275 cggcaacatcggcgaccagtggagcgac 302 ||||||| |||||||||||||||||||| Sbjct: 14312 cggcaacgtcggcgaccagtggagcgac 14285
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 260 cgggtacgtcatcgtcggcaacatcggcgaccagt 294 |||||||| |||||||| |||| |||||||||||| Sbjct: 7652412 cgggtacgacatcgtcgccaacttcggcgaccagt 7652446
>ref|XM_366443.1| Magnaporthe grisea 70-15 hypothetical protein (MG10661.4) partial mRNA Length = 840 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 278 caacatcggcgaccagtggagcgacatcctcggc 311 ||||||||||| ||||||||||||| || ||||| Sbjct: 663 caacatcggcgcccagtggagcgacttcttcggc 696
>ref|XM_507001.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1353_F08.16-1 mRNA Length = 1411 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 717 catcgtcgccaacatcggcgaccag 741
>ref|XM_468017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1316 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 726 catcgtcgccaacatcggcgaccag 750
>emb|AL512452.7| Human DNA sequence from clone RP11-520F22 on chromosome 13, complete sequence Length = 141913 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 ataataatcaagctccatgct 432 ||||||||||||||||||||| Sbjct: 19141 ataataatcaagctccatgct 19121
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 atcgtcggcaacatcggcgaccagt 294 ||||||||||| ||||||||||||| Sbjct: 1102908 atcgtcggcaagatcggcgaccagt 1102884
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 32580450 catcgtcgccaacatcggcgaccag 32580474
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 acatcctcggcgcgcccgagg 321 ||||||||||||||||||||| Sbjct: 1107137 acatcctcggcgcgcccgagg 1107157
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 7821 catcgtcgccaacatcggcgaccag 7845
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 77423 catcgtcgccaacatcggcgaccag 77447
>dbj|AK103969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B02, full insert sequence Length = 1316 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 726 catcgtcgccaacatcggcgaccag 750
>dbj|AK071557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099D13, full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 717 catcgtcgccaacatcggcgaccag 741
>dbj|AK066805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078A14, full insert sequence Length = 3000 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 2410 catcgtcgccaacatcggcgaccag 2434
>gb|AF079589.1|AF079589 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, partial cds Length = 876 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 273 catcgtcgtcaacatcggcgaccag 297
>gb|AF049889.1|AF049889 Oryza sativa 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, complete cds Length = 1299 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 catcgtcggcaacatcggcgaccag 293 |||||||| |||||||||||||||| Sbjct: 709 catcgtcgccaacatcggcgaccag 733
>ref|XM_478983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 687 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 gcgccggcgctgccggagacgaagcggc 63 |||||| |||||||||||||| |||||| Sbjct: 625 gcgccgccgctgccggagacggagcggc 598
>gb|L29074.1|HUMFMR1S Homo sapiens fragile X mental retardation syndrome protein (FMR1) gene, alternative splice products, complete cds; and pseudogene, complete sequence Length = 185775 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ctctactacaagctactcaa 82 |||||||||||||||||||| Sbjct: 149689 ctctactacaagctactcaa 149708
>emb|AL049761.11|HSDJ863C7 Human DNA sequence from clone RP5-863C7 on chromosome 20p12.3-13 Contains the CSNK2A1 gene for casein kinase 2 alpha 1 polypeptide (EC 2.7.1.37), the 5' end of the C20orf140 gene for a novel protein similar to Drosophila CG17883 and a CpG island, complete sequence Length = 108653 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cttcaagctgcctgacccca 351 |||||||||||||||||||| Sbjct: 105928 cttcaagctgcctgacccca 105909
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcggcgcgcccgagggcg 324 |||||||||||||||||||| Sbjct: 22199 cctcggcgcgcccgagggcg 22180
>gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribosomal peptide synthetase gene cluster, partial sequence Length = 28890 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 agcttcgacgcgtacgtgctggag 29 ||||||||||||| |||||||||| Sbjct: 24590 agcttcgacgcgtccgtgctggag 24613 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 agcttcgacgcgtacgtgctggag 29 ||||||||||||| |||||||||| Sbjct: 1340 agcttcgacgcgtccgtgctggag 1363
>gb|AC006054.2| Homo sapiens Xq28 BAC GS1-382P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143738 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ctctactacaagctactcaa 82 |||||||||||||||||||| Sbjct: 119666 ctctactacaagctactcaa 119647
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcggcgcgcccgagggcg 324 |||||||||||||||||||| Sbjct: 9689993 cctcggcgcgcccgagggcg 9689974
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gagaggaagaagctgcagga 256 |||||||||||||||||||| Sbjct: 280176 gagaggaagaagctgcagga 280157
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gaagaagctgcaggacgccg 261 |||||||||||||||||||| Sbjct: 28643909 gaagaagctgcaggacgccg 28643928
>gb|L20214.1|XELASH3A Xenopus laevis achaete-scute homologous protein mRNA, complete cds Length = 591 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 gcgctgccggagacgaagcggctc 65 |||||||| ||||||||||||||| Sbjct: 186 gcgctgccagagacgaagcggctc 209
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 aggggagcgcgccggcgctgccgg 51 |||| ||||||||||||||||||| Sbjct: 931235 agggcagcgcgccggcgctgccgg 931212
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cctcggcgcgcccgagggcg 324 |||||||||||||||||||| Sbjct: 1123678 cctcggcgcgcccgagggcg 1123697
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gaagaagctgcaggacgccg 261 |||||||||||||||||||| Sbjct: 135387 gaagaagctgcaggacgccg 135406
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gaagaagctgcaggacgccg 261 |||||||||||||||||||| Sbjct: 44475 gaagaagctgcaggacgccg 44494
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 gcgccggcgctgccggagacgaagcggc 63 |||||| |||||||||||||| |||||| Sbjct: 57675 gcgccgccgctgccggagacggagcggc 57648
>dbj|AK099132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051M04, full insert sequence Length = 3065 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gagaggaagaagctgcagga 256 |||||||||||||||||||| Sbjct: 587 gagaggaagaagctgcagga 606
>dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150I16, full insert sequence Length = 3183 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gagaggaagaagctgcagga 256 |||||||||||||||||||| Sbjct: 702 gagaggaagaagctgcagga 721
>tpe|BN000621.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx92 gene for class III peroxidase 92 precursor, exons 1-3 Length = 1183 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gaagaagctgcaggacgccg 261 |||||||||||||||||||| Sbjct: 844 gaagaagctgcaggacgccg 825
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cgacgagcttcgacgcgtac 20 |||||||||||||||||||| Sbjct: 582851 cgacgagcttcgacgcgtac 582832
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tgggcatcaagccggtgttc 104 |||||||||||||||||||| Sbjct: 2923992 tgggcatcaagccggtgttc 2923973
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gagaggaagaagctgcagga 256 |||||||||||||||||||| Sbjct: 280176 gagaggaagaagctgcagga 280157
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 aagaagctgcaggacgccgg 262 |||||||||||||||||||| Sbjct: 1980916 aagaagctgcaggacgccgg 1980897
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gagaggaagaagctgcagga 256 |||||||||||||||||||| Sbjct: 13227 gagaggaagaagctgcagga 13208
>gb|U09768.1|XLU09768 Xenopus laevis achaete-scute homolog 3a mRNA, complete cds Length = 746 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 gcgctgccggagacgaagcggctc 65 |||||||| ||||||||||||||| Sbjct: 202 gcgctgccagagacgaagcggctc 225
>dbj|AP005020.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-486A21, complete sequences Length = 57000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ctgcctgaccccatttacta 358 |||||||||||||||||||| Sbjct: 40106 ctgcctgaccccatttacta 40125 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,786,360 Number of Sequences: 3902068 Number of extensions: 2786360 Number of successful extensions: 52298 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50917 Number of HSP's gapped (non-prelim): 1378 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
