Clone Information

BLAST Search Result

Clone Name	baet95f01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-re...	35	0.077
2	TAF4_HUMAN (O00268) Transcription initiation factor TFIID subuni...	31	0.095
3	CCD94_HUMAN (Q9BW85) Coiled-coil domain-containing protein 94	32	0.50
4	SAM68_CHICK (Q8UUW7) KH domain-containing, RNA-binding, signal t...	32	0.85
5	VRP1_YEAST (P37370) Verprolin	31	1.5
6	WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)	31	1.5
7	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	31	1.5
8	DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)	30	1.9
9	SAM68_HUMAN (Q07666) KH domain-containing, RNA-binding, signal t...	30	2.5
10	FOXL2_HUMAN (P58012) Forkhead box protein L2	30	2.5
11	DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)	30	2.5
12	IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Ir...	30	2.5
13	HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)	30	3.2
14	DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-re...	30	3.2
15	FMN_CHICK (Q05858) Formin (Limb deformity protein)	30	3.2
16	WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)	30	3.2
17	FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)	30	3.2
18	EFG1_CANAL (P43064) Enhanced filamentous growth protein	30	3.2
19	VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)	29	4.2
20	DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-re...	29	4.2
21	DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular)...	29	4.2
22	FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) ...	29	5.5
23	DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-re...	29	5.5
24	Y425_CAUCR (Q9AB09) Hypothetical UPF0324 membrane protein CC0425	29	5.5
25	APBA1_RAT (O35430) Amyloid beta A4 precursor protein-binding fam...	29	5.5
26	AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7...	29	5.5
27	RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6....	29	5.5
28	PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor	29	5.5
29	LR37A_HUMAN (O60309) Leucine-rich repeat-containing protein 37A	29	5.5
30	FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead...	29	5.5
31	UL29_HCMVA (P16764) Hypothetical protein UL29	28	7.2
32	VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)	28	7.2
33	PHC2_MOUSE (Q9QWH1) Polyhomeotic-like protein 2 (mPH2) (Early de...	28	7.2
34	Y7700_STRCO (Q9F1Y6) Hypothetical protein SCO7700	28	9.4
35	NDF2_HUMAN (Q15784) Neurogenic differentiation factor 2 (NeuroD2...	28	9.4
36	LIX1L_HUMAN (Q8IVB5) LIX1-like protein	28	9.4
37	CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)	28	9.4
38	DUS8_HUMAN (Q13202) Dual specificity protein phosphatase 8 (EC 3...	28	9.4
39	CG1_HUMAN (Q13495) CG1 protein (F18)	28	9.4
40	TRHY_RABIT (P37709) Trichohyalin	28	9.4
41	DAAM1_MOUSE (Q8BPM0) Disheveled-associated activator of morphoge...	28	9.4
42	POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)	28	9.4
43	PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor	28	9.4
44	MBA2_ECOLI (P07112) Mobilization protein A	28	9.4

>DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2)
          Length = 1101

 Score = 35.0 bits (79), Expect = 0.077
 Identities = 25/48 (52%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
 Frame = +3

Query: 117 LVVEQQPLLSSSG-RGPPTAPPLPGA------HAPRLRAHACPLPDPP 239
           L  + Q L SSSG  GPP APPLPG        AP L   A PLP PP
Sbjct: 535 LRTQAQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGA-PLPPPP 581

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>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 30.8 bits (68), Expect(2) = 0.095
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 120 VVEQQPLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPPALAS 251
           V++  P + ++    P AP  P A AP   A A P P PPA A+
Sbjct: 237 VIQTPPFVGAAAPPAPAAPSPPAAPAPAAPA-AAPPPPPPAPAT 279



 Score = 22.7 bits (47), Expect(2) = 0.095
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 335 LPRPAGVMNSGSAGA 379
           +P PA   N GSAGA
Sbjct: 297 VPPPAAAQNGGSAGA 311

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>CCD94_HUMAN (Q9BW85) Coiled-coil domain-containing protein 94|
          Length = 323

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = +3

Query: 96  RPQRRRLLVVEQQPLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPPALAS 251
           RP   RL+VV++         G P A P PG  AP+ R  A P P  P  +S
Sbjct: 257 RPPLSRLVVVKKAKADPDCSNGQPQAAPTPG--APQNRKEANPTPLTPGASS 306

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>SAM68_CHICK (Q8UUW7) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (Src-associated in
           mitosis 68 kDa protein) (Sam68)
          Length = 433

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = +3

Query: 156 RGPPTAPPLPGAHAPRLRA---HACPLPDPPA 242
           RG P  P + GA APR RA      PLP PPA
Sbjct: 321 RGVPPPPAVRGAPAPRARAAGIQRIPLPPPPA 352

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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 162 PPTAPPLPGAHAPRLRAHACPLPDPPALAS 251
           P +APP+P +HAP L   A P P  P + S
Sbjct: 311 PSSAPPIPTSHAPPLPPTAPPPPSLPNVTS 340



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +3

Query: 162 PPTAPP---LPGAHAPRLRAHACPLPDPPAL 245
           PPTAPP   LP   +   +A + P P PP L
Sbjct: 326 PPTAPPPPSLPNVTSAPKKATSAPAPPPPPL 356



 Score = 28.1 bits (61), Expect = 9.4
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +3

Query: 165 PTAPPLPGAHAPRLRAHACPL----PDPPAL 245
           P+ PPLP +  P   +HA PL    P PP+L
Sbjct: 305 PSQPPLPSSAPPIPTSHAPPLPPTAPPPPSL 335

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>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)|
          Length = 520

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 147 SSGRGPPTAPPLPGAHAPRLRAHACPLPDPP 239
           ++GR  P  PPLPGA  P       P P PP
Sbjct: 391 ATGRSGPPPPPLPGAGGPPAPPPPPPPPPPP 421

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 87  RHLRPQRRRLLVVEQQPLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPPA 242
           RH R   +  +VV   P+LSS    PP +PP P +  P        LP PP+
Sbjct: 115 RHCRLGLKLAVVVMVAPVLSSPP--PPPSPPTPRSSTPIPHPPRRSLPSPPS 164

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>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)|
          Length = 347

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
 Frame = +3

Query: 135 PLLSSSGRG-PPTAPPLPGAHAPRLRAHA------CPL 227
           PLL    RG PP  PPLP    PRLR  A      CP+
Sbjct: 129 PLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPI 166

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>SAM68_HUMAN (Q07666) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +3

Query: 156 RGPPTAPPLPGAHAPRLRA---HACPLPDPPA 242
           RG P  P + GA APR R       PLP PPA
Sbjct: 331 RGVPPPPTVRGAPAPRARTAGIQRIPLPPPPA 362

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>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
 Frame = +3

Query: 159 GPPTAPPLPG-----AHAPRLRAHACPLPDPP 239
           GPP APP P       HA  L A A P P PP
Sbjct: 279 GPPAAPPPPPHPHPHPHAHHLHAAAAPPPAPP 310

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>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)|
          Length = 347

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
 Frame = +3

Query: 135 PLLSSSGRG-PPTAPPLPGAHAPRLRAHA------CPL 227
           PLL    RG PP  PPLP    PRLR  A      CP+
Sbjct: 129 PLLPPGARGLPPPPPPLPPPLPPRLREDAEEQETTCPI 166

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>IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Iroquois|
           homeobox protein 3) (Homeodomain protein IRXB1)
          Length = 507

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 383 WAPRRTQNSSHRPGGAERTREASERSWSGSRREAEEDRKESA 258
           WAPR   +      G+ER  E  E     S+RE E + +E A
Sbjct: 196 WAPRSRTDEEGNAYGSEREEEDEEEDEEESKRELEMEEEELA 237

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>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)|
          Length = 401

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +3

Query: 162 PPTAPPLPG-AHAPRLRAHACPLPDPP 239
           PP AP LP  AH P L  H  P P PP
Sbjct: 57  PPAAPCLPPLAHHPHLPPHPPPPPPPP 83

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>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2) (mDia3)
          Length = 1098

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +3

Query: 159 GPPTAPPLPGAHAPRLRAHACPLPDPP 239
           GPP  PPLPGA         CP P PP
Sbjct: 545 GPPPPPPLPGAGP-------CPPPPPP 564

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>FMN_CHICK (Q05858) Formin (Limb deformity protein)|
          Length = 1213

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +3

Query: 153 GRGPPTAPPLPGAHAPRLRAHACPLPDPP 239
           G GPP  PPLPG+  P       P P PP
Sbjct: 728 GLGPPVPPPLPGSGLP-------PPPPPP 749

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>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)|
          Length = 501

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 147 SSGRGPPTAPPLPGAHAPRLRAHACPLPDPPA 242
           ++GR  P  PP PGA  P +     P P PP+
Sbjct: 373 ATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPS 404

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>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)|
          Length = 1094

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
 Frame = +3

Query: 162 PPTAPPLPGA----HAPRLRAHACPLPDPPALAS 251
           PP APPLPG      AP L     P P PP L +
Sbjct: 562 PPLAPPLPGCAEPPPAPPLPGDLPPPPPPPPLGT 595



 Score = 28.9 bits (63), Expect = 5.5
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = +3

Query: 135 PLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPP 239
           P L S    PP+APPL    AP L   A P P PP
Sbjct: 549 PNLQSQQEAPPSAPPL----APPLPGCAEPPPAPP 579

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>EFG1_CANAL (P43064) Enhanced filamentous growth protein|
          Length = 552

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 135 PLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDP 236
           P+ S+S  GP   PPLPG  A  +  H   +  P
Sbjct: 145 PIPSNSTSGPSQQPPLPGQQAVPIPPHVSTMQQP 178

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>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 379

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 150 SGRGPPTAPPLPGAHAP 200
           +G GPP APPLP A  P
Sbjct: 199 AGGGPPPAPPLPAAQGP 215

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>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1)
          Length = 1248

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
 Frame = +3

Query: 135 PLLSSSGRGPPTAPPLPGAHA-----PRLRAHACPLPDPPAL 245
           P L  S R PP  PPLPG+       P L   A   P PP L
Sbjct: 658 PPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL 699

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>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 859

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
 Frame = +3

Query: 126 EQQPLLSS------SGRGPPTAPPLPGAH--APRLRAHACPLPDPPA 242
           +++P LS+      SGRGP  A P PG H  AP +     PLP  P+
Sbjct: 767 QRRPTLSAPLARPTSGRGPAPAIPSPGPHSGAPPVPFRPGPLPPFPS 813

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>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte|
           formin) (CLL-associated antigen KW-13)
          Length = 1100

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 153 GRGPPTAPPLPGAHAPRLRAHACPLPDPP 239
           G  PP  PPLPG  +P+    + P   PP
Sbjct: 539 GAAPPPPPPLPGLPSPQEAPPSAPPQAPP 567



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
 Frame = +3

Query: 162 PPTAPPLPGA----HAPRLRAHACPLPDPP 239
           PP APPLPG+     AP L     P P PP
Sbjct: 562 PPQAPPLPGSPEPPPAPPLPGDLPPPPPPP 591

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>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)|
           (DRF3)
          Length = 1110

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 135 PLLSSSGRGPPTAPPLPGAHAPRLR-AHACPLPDPPAL 245
           P L S G  PP  PP P    P +R   + P+P PP L
Sbjct: 579 PPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPL 616

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>Y425_CAUCR (Q9AB09) Hypothetical UPF0324 membrane protein CC0425|
          Length = 465

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 23/55 (41%), Positives = 24/55 (43%)
 Frame = +3

Query: 87  RHLRPQRRRLLVVEQQPLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPPALAS 251
           R LRP   R L +   P    SG   P  P L      RLRAH  P   PPA AS
Sbjct: 61  RDLRPAHGRGLELWLHPAGRGSGLPHPWRPAL------RLRAHRQPDRAPPARAS 109

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>APBA1_RAT (O35430) Amyloid beta A4 precursor protein-binding family A member|
           1 (Neuron-specific X11 protein) (Neuronal
           Munc18-1-interacting protein 1) (Mint-1) (Adapter
           protein X11alpha)
          Length = 839

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 171 APPLPGAHAPR-LRAHACPLPDPP 239
           +PP P  HAP   RAH  P P PP
Sbjct: 41  SPPPPAGHAPEDHRAHPAPPPPPP 64

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>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)|
          Length = 799

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 132 QPLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPPA 242
           +P  ++ GRG    P   GA AP    HA PLP PPA
Sbjct: 303 KPATTAGGRGHGHGPS--GARAP---VHAPPLPPPPA 334

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>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 690

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
 Frame = -2

Query: 380 APRRTQNSSHRPGGAE-----RTREASERSWSGSRREAEEDRKE 264
           APR T +   R GG+E       R  SER   G RR  ++D ++
Sbjct: 128 APRETASDQDRSGGSEARDEGEDRPQSERRSRGRRRAGDDDAQQ 171

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>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor|
          Length = 1955

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 189  AHAPRLRAHACPLPDPPALA 248
            AH P +   ACPLP PP ++
Sbjct: 1735 AHPPNISPSACPLPPPPPIS 1754

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>LR37A_HUMAN (O60309) Leucine-rich repeat-containing protein 37A|
          Length = 1634

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
 Frame = +3

Query: 114 LLVVEQQPL--------LSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPP 239
           LLV E QPL        L+S+  GPP       +H PR   HA  LP  P
Sbjct: 32  LLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADP 81

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>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 8/35 (22%)
 Frame = +3

Query: 159 GPPTAPPLPGA--------HAPRLRAHACPLPDPP 239
           GPP APP P          HA  L A A P P PP
Sbjct: 275 GPPAAPPPPPPPPHPHPHPHAHHLHAAAAPPPAPP 309

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>UL29_HCMVA (P16764) Hypothetical protein UL29|
          Length = 360

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 144 SSSGRGPPT-APPLPGAHAPRLRAHACPLPD 233
           SSS   PP+  PPLPG HA R R   C +P+
Sbjct: 14  SSSSSSPPSRLPPLPG-HARRPRRKRCLVPE 43

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>VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 382

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 150 SGRGPPTAPPLPGAHAP 200
           +G GPP APPLP A  P
Sbjct: 202 AGGGPPPAPPLPTAQGP 218

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>PHC2_MOUSE (Q9QWH1) Polyhomeotic-like protein 2 (mPH2) (Early development|
           regulatory protein 2) (p36)
          Length = 850

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 117 LVVEQQPLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPP 239
           L  +Q P  ++SG  PPT P LP        + + PLP PP
Sbjct: 230 LRTQQTPAAAASGP-PPTQPVLPSLALKPTPSSSQPLPAPP 269

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>Y7700_STRCO (Q9F1Y6) Hypothetical protein SCO7700|
          Length = 440

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +3

Query: 162 PPTAPPLPGAHAPRLRAHACPLPDP 236
           P +APP  G   P L  H  P PDP
Sbjct: 108 PASAPPAAGRAVPGLYHHPVPEPDP 132

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>NDF2_HUMAN (Q15784) Neurogenic differentiation factor 2 (NeuroD2)|
           (NeuroD-related factor) (NDRF)
          Length = 382

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +3

Query: 144 SSSGRGPPTAPPLPGAHAPRLRAHACPLP 230
           S  G  PP  PP PG  AP     A P+P
Sbjct: 31  SDKGDAPPPPPPAPGPGAPGPARAAKPVP 59

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>LIX1L_HUMAN (Q8IVB5) LIX1-like protein|
          Length = 337

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +3

Query: 159 GPPTAPPLPGAHAPRLRAHACP-LPDPPALA 248
           GPP APP P    P L     P LP PP  A
Sbjct: 41  GPPPAPPPPAPPPPPLLLSGAPGLPLPPGAA 71

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>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
 Frame = +3

Query: 36  ARGQFHXXXXXXXXXXXRHLRPQRRRLL----VVEQQPLLSSSGRGPPTAPPLPGAHAPR 203
           +R +++           + L  +RR  L    ++  QP L +SG  PP  PP      P 
Sbjct: 645 SRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPPN 704

Query: 204 LRAHACPLPDP 236
                 PLP P
Sbjct: 705 -----GPLPLP 710

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>DUS8_HUMAN (Q13202) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC|
           3.1.3.16) (Dual specificity protein phosphatase hVH-5)
          Length = 625

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 141 LSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPP 239
           LS+ G   P  P  PGA AP L +   P PD P
Sbjct: 491 LSAPGLPGPGQPAGPGAWAPPLDSPGTPSPDGP 523

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>CG1_HUMAN (Q13495) CG1 protein (F18)|
          Length = 701

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +3

Query: 126 EQQPLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPP 239
           +Q P  S SG  PP   P P    P L+    PLP PP
Sbjct: 248 QQGPTPSWSGLPPPGLSP-PSRPVPSLQPPPLPLPPPP 284

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>TRHY_RABIT (P37709) Trichohyalin|
          Length = 1407

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 374 RRTQNSSHRPGGAERTREASERSWSGSR-REAEEDRKE 264
           RR Q  S RP   ER   A ER     R RE EE R+E
Sbjct: 437 RRRQRLSARPSLRERQLRAEERQEQEQRFREEEEQRRE 474

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>DAAM1_MOUSE (Q8BPM0) Disheveled-associated activator of morphogenesis 1|
          Length = 1071

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 16/37 (43%), Positives = 16/37 (43%)
 Frame = +3

Query: 135 PLLSSSGRGPPTAPPLPGAHAPRLRAHACPLPDPPAL 245
           P L S G  PP  PPLP    P       P P PP L
Sbjct: 554 PPLLSGGALPPPPPPLPAGGPP-------PPPGPPPL 583

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>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1748

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 14/68 (20%)
 Frame = +3

Query: 90  HLRPQ-------RRRLLVVEQQPLLSSSGRGPPTAP-------PLPGAHAPRLRAHACPL 227
           HL P+       RR LL+      L SS   PP +P       PLP A  P       P 
Sbjct: 537 HLHPESFTLGWKRRPLLLDSHSSFLPSSCLQPPASPSIAAAPHPLPPAQKPPRPPTTVPT 596

Query: 228 PDPPALAS 251
           P P A  S
Sbjct: 597 PKPLASPS 604

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>PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor|
          Length = 551

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 153 GRGPPTAPPLPGAHAPRLRAHACPLP 230
           G   PTAPP+  + +P L  HA P P
Sbjct: 169 GTPGPTAPPVTNSTSPDLLGHATPKP 194

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>MBA2_ECOLI (P07112) Mobilization protein A|
          Length = 708

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -2

Query: 398 PSSRWWAPRRTQNSSHRPGGAERTREASERSWSGSRREAEEDRKESA 258
           P+++W+  +R    +   GGA++T     ++W    REA  D    A
Sbjct: 135 PAAQWF--KRYNGKTPEKGGAQKTEALKPKAWLEQTREAWADHANRA 179


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,023,433
Number of Sequences: 219361
Number of extensions: 616775
Number of successful extensions: 4712
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 3720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4626
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result