ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet95e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1METX_RALSO (Q8Y3F3) Homoserine O-acetyltransferase (EC 2.3.1.31)... 29 5.0

>METX_RALSO (Q8Y3F3) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 403

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +2

Query: 176 TYGA-NLRRLAAVLPAKTASSQ----GLHASGDVGYWPNRV 283
           TYG  N  R  AVL     ++     G+HA G+VG+W N V
Sbjct: 64  TYGTLNAERSNAVLICHALNASHHVAGVHAEGEVGWWDNMV 104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,338,248
Number of Sequences: 219361
Number of extensions: 550099
Number of successful extensions: 1948
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1948
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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