>SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)|
          Length = 315

 Score = 25.0 bits (53), Expect(2) = 2.2
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 79  KCEWGREV*GRIGAWSEERRGGGVG 5
           KC W R   G  G WS  RR G +G
Sbjct: 175 KCAWSRPRGGSCGGWS--RRDGPLG 197



 Score = 23.1 bits (48), Expect(2) = 2.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 197 PIRARPRIPAGTGRRTLVGSTP 132
           P +ARPR P G+G  +  GS+P
Sbjct: 119 PAKARPRPPGGSGGGS--GSSP 138

>G3ST3_MOUSE (P61315) Galactose-3-O-sulfotransferase 3 (EC 2.8.2.-)|
           (Galbeta1-3GalNAc 3'-sulfotransferase)
           (Beta-galactose-3-O-sulfotransferase 3)
          Length = 431

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/33 (51%), Positives = 17/33 (51%)
 Frame = -2

Query: 260 QGGRPGARSPPRSFAYQLYSVPIRARPRIPAGT 162
           Q  R G RS P S        PIRA PRIP GT
Sbjct: 399 QKRRGGVRSRPESVLDNPPPRPIRALPRIPQGT 431

>RGMC_HUMAN (Q6ZVN8) Hemojuvelin precursor (Hemochromatosis type 2 protein)|
           (RGM domain family member C)
          Length = 426

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = +2

Query: 146 PTSSSLSRPGSLAGHG*ARCIIDRRTNEVVIA----RPGGLPAMARGGGNGEEELSVG 307
           PT S+L+    L GH  ++C I R   E V +    R GG     RGGG G     VG
Sbjct: 18  PTLSTLTLLLLLCGHAHSQCKILRCNAEYVSSTLSLRGGGSSGALRGGGGGGRGGGVG 75

>SYA_CORJK (Q4JVF5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 887

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 227 EVVIARPGGLPAMARGGGNGEEELSVG 307
           E V  R GG PAMA+G G+    +S G
Sbjct: 851 EKVAGRGGGKPAMAQGSGSDAAGISAG 877

>RGMC_MOUSE (Q7TQ32) Hemojuvelin precursor (Hemochromatosis type 2 protein|
           homolog) (RGM domain family member C)
          Length = 420

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
 Frame = +2

Query: 146 PTSSSLSRPGSLAGHG*ARCIIDRRTNEVVIA----RPGGLPAMARGGGNG 286
           PT S+L+    L G   ++C I R   E V +    R GG P   RGGG G
Sbjct: 15  PTLSTLTLLLLLCGQAHSQCKILRCNAEYVSSTLSLRGGGSPDTPRGGGRG 65

>PALF_NEUCR (Q7SGZ5) pH-response regulator protein palF/rim-8|
          Length = 927

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 245 GARSPPRSFAYQLYSVPIRARPRIPAGTGRRTLVGS 138
           G  +PP++    L  +  RA+ + PAG  RR+++ S
Sbjct: 187 GPLAPPKAQTVDLRPISKRAKKKRPAGGDRRSVISS 222


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,642,017
Number of Sequences: 219361
Number of extensions: 357475
Number of successful extensions: 974
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)