| Clone Name | baet95d08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM055812.1| Hordeum vulgare subsp. vulgare mRNA for sucrose transporter 1 (sut1 gene) Length = 2044 Score = 335 bits (169), Expect = 5e-89 Identities = 175/177 (98%) Strand = Plus / Plus Query: 133 ggcgttgatccgaccaacgtcctcctccctgtcccggccgggatccttggccgggcacgg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggcgttgatccgaccaacgtcctcctccctgtcccggccgggatccttggccgggcacgg 60 Query: 193 ataggcacgctgtataattgataggcgaacgaacgaggtggtgatcgcgcgcccgggcgg 252 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ataggcacgctgtagaattgataggcgaacgaacgaggtggtgatcgcgcgcccgggcgg 120 Query: 253 cctccctgcgatggcgcgcggcggcggcaacggcgaggaggagctctcggtgggggt 309 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 cctccctgcgatggcgcgcggcggcggcaacggcgaggtggagctctcggtgggggt 177
>emb|AJ272309.1|HVU272309 Hordeum vulgare mRNA for sucrose transporter 1 (sut1 gene) Length = 2044 Score = 327 bits (165), Expect = 1e-86 Identities = 174/177 (98%) Strand = Plus / Plus Query: 133 ggcgttgatccgaccaacgtcctcctccctgtcccggccgggatccttggccgggcacgg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggcgttgatccgaccaacgtcctcctccctgtcccggccgggatccttggccgggcacgg 60 Query: 193 ataggcacgctgtataattgataggcgaacgaacgaggtggtgatcgcgcgcccgggcgg 252 |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 61 ataggcacgctgtagaattgataggcgaacgaacgaggtggtgatcgcacgcccgggcgg 120 Query: 253 cctccctgcgatggcgcgcggcggcggcaacggcgaggaggagctctcggtgggggt 309 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 cctccctgcgatggcgcgcggcggcggcaacggcgaggtggagctctcggtgggggt 177
>gb|BT009233.1| Triticum aestivum clone wle1n.pk0103.c11:fis, full insert mRNA sequence Length = 2083 Score = 198 bits (100), Expect = 7e-48 Identities = 209/242 (86%), Gaps = 15/242 (6%) Strand = Plus / Plus Query: 69 cactcgcactttccgccctcgtctcctcctcttccgcctcccgtcagcccccctcttctt 128 |||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 35 cactcgcactttccgctctcgtctcctcctcttcctcctcccgtcagaccc----ttctt 90 Query: 129 ccccggcgttgatccgaccaacgtcctcctccctgtcccggccgg-gatccttggccggg 187 ||||||||||||||||| |||||||||||||| |||| | || |||||||||||||| Sbjct: 91 ccccggcgttgatccgatcaacgtcctcctcc--gtcctgcccctagatccttggccggg 148 Query: 188 cacggataggcacgctgtataattgataggcgaacgaacgaggtggtgatcgcgcgcccg 247 || ||||| ||| ||| |||||||||||||||| |||||||||||||||| | | Sbjct: 149 cagggata----cgccgtagaattgataggcgaacggacgaggtggtgatcgc----cag 200 Query: 248 ggcggcctccctgcgatggcgcgcggcggcggcaacggcgaggaggagctctcggtgggg 307 ||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||| ||| Sbjct: 201 ggcggcctctctgccatggcgcgcggcggaggcaacggcgaggtggagctctcggtcggg 260 Query: 308 gt 309 || Sbjct: 261 gt 262
>gb|AF408844.1| Triticum aestivum sucrose transporter SUT1D mRNA, complete cds Length = 2106 Score = 198 bits (100), Expect = 7e-48 Identities = 209/242 (86%), Gaps = 15/242 (6%) Strand = Plus / Plus Query: 69 cactcgcactttccgccctcgtctcctcctcttccgcctcccgtcagcccccctcttctt 128 |||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 49 cactcgcactttccgctctcgtctcctcctcttcctcctcccgtcagaccc----ttctt 104 Query: 129 ccccggcgttgatccgaccaacgtcctcctccctgtcccggccgg-gatccttggccggg 187 ||||||||||||||||| |||||||||||||| |||| | || |||||||||||||| Sbjct: 105 ccccggcgttgatccgatcaacgtcctcctcc--gtcctgcccctagatccttggccggg 162 Query: 188 cacggataggcacgctgtataattgataggcgaacgaacgaggtggtgatcgcgcgcccg 247 || ||||| ||| ||| |||||||||||||||| |||||||||||||||| | | Sbjct: 163 cagggata----cgccgtagaattgataggcgaacggacgaggtggtgatcgc----cag 214 Query: 248 ggcggcctccctgcgatggcgcgcggcggcggcaacggcgaggaggagctctcggtgggg 307 ||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||| ||| Sbjct: 215 ggcggcctctctgccatggcgcgcggcggaggcaacggcgaggtggagctctcggtcggg 274 Query: 308 gt 309 || Sbjct: 275 gt 276
>gb|AF408845.1| Triticum aestivum sucrose transporter SUT1D gene, complete cds Length = 6582 Score = 198 bits (100), Expect = 7e-48 Identities = 209/242 (86%), Gaps = 15/242 (6%) Strand = Plus / Plus Query: 69 cactcgcactttccgccctcgtctcctcctcttccgcctcccgtcagcccccctcttctt 128 |||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 1064 cactcgcactttccgctctcgtctcctcctcttcctcctcccgtcagaccc----ttctt 1119 Query: 129 ccccggcgttgatccgaccaacgtcctcctccctgtcccggccgg-gatccttggccggg 187 ||||||||||||||||| |||||||||||||| |||| | || |||||||||||||| Sbjct: 1120 ccccggcgttgatccgatcaacgtcctcctcc--gtcctgcccctagatccttggccggg 1177 Query: 188 cacggataggcacgctgtataattgataggcgaacgaacgaggtggtgatcgcgcgcccg 247 || ||||| ||| ||| |||||||||||||||| |||||||||||||||| | | Sbjct: 1178 cagggata----cgccgtagaattgataggcgaacggacgaggtggtgatcgc----cag 1229 Query: 248 ggcggcctccctgcgatggcgcgcggcggcggcaacggcgaggaggagctctcggtgggg 307 ||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||| ||| Sbjct: 1230 ggcggcctctctgccatggcgcgcggcggaggcaacggcgaggtggagctctcggtcggg 1289 Query: 308 gt 309 || Sbjct: 1290 gt 1291
>gb|BT009324.1| Triticum aestivum clone wlm24.pk0015.g11:fis, full insert mRNA sequence Length = 2160 Score = 103 bits (52), Expect = 3e-19 Identities = 91/103 (88%), Gaps = 7/103 (6%) Strand = Plus / Plus Query: 210 ttgataggcgaacgaacgaggtggtgatcgcgcgcccgggcggcctccctgcga---tgg 266 |||||||||||||||||| || |||||||| |||||||||| |||||||| ||| Sbjct: 148 ttgataggcgaacgaacggggcggtgatcgt----ccgggcggcccccctgcgacgatgg 203 Query: 267 cgcgcggcggcggcaacggcgaggaggagctctcggtgggggt 309 |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 204 cgcgcggcggcggcaacggcgaggtggagctctcggtgggggt 246 Score = 103 bits (52), Expect = 3e-19 Identities = 80/89 (89%), Gaps = 4/89 (4%) Strand = Plus / Plus Query: 69 cactcgcactttccgccctcgtctcctcctcttccgcctcccgtcagcccccctcttctt 128 ||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||| Sbjct: 29 cactcgcgctttccgctctcgtctcctcctcttcctcctcccgtcagccc----cttctt 84 Query: 129 ccccggcgttgatccgaccaacgtcctcc 157 ||||||||||||||||| | ||||||||| Sbjct: 85 ccccggcgttgatccgatcgacgtcctcc 113
>gb|AF408843.1| Triticum aestivum sucrose transporter SUT1B mRNA, complete cds Length = 2021 Score = 103 bits (52), Expect = 3e-19 Identities = 91/103 (88%), Gaps = 7/103 (6%) Strand = Plus / Plus Query: 210 ttgataggcgaacgaacgaggtggtgatcgcgcgcccgggcggcctccctgcga---tgg 266 |||||||||||||||||| || |||||||| |||||||||| |||||||| ||| Sbjct: 72 ttgataggcgaacgaacggggcggtgatcgt----ccgggcggcccccctgcgacgatgg 127 Query: 267 cgcgcggcggcggcaacggcgaggaggagctctcggtgggggt 309 |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 128 cgcgcggcggcggcaacggcgaggtggagctctcggtgggggt 170 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 123 cttcttccccggcgttgatccgaccaacgtcctcc 157 ||||||||||||||||||||||| | ||||||||| Sbjct: 3 cttcttccccggcgttgatccgatcgacgtcctcc 37
>gb|AF408842.1| Triticum aestivum sucrose transporter SUT1A mRNA, complete cds Length = 2134 Score = 103 bits (52), Expect = 3e-19 Identities = 91/103 (88%), Gaps = 7/103 (6%) Strand = Plus / Plus Query: 210 ttgataggcgaacgaacgaggtggtgatcgcgcgcccgggcggcctccctgcga---tgg 266 |||||||||||||||||| || |||||||| |||||||||| |||||||| ||| Sbjct: 170 ttgataggcgaacgaacggggcggtgatcgt----ccgggcggcccccctgcgacgatgg 225 Query: 267 cgcgcggcggcggcaacggcgaggaggagctctcggtgggggt 309 |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 226 cgcgcggcggcggcaacggcgaggtggagctctcggtgggggt 268 Score = 103 bits (52), Expect = 3e-19 Identities = 80/89 (89%), Gaps = 4/89 (4%) Strand = Plus / Plus Query: 69 cactcgcactttccgccctcgtctcctcctcttccgcctcccgtcagcccccctcttctt 128 ||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||| Sbjct: 51 cactcgcgctttccgctctcgtctcctcctcttcctcctcccgtcagccc----cttctt 106 Query: 129 ccccggcgttgatccgaccaacgtcctcc 157 ||||||||||||||||| | ||||||||| Sbjct: 107 ccccggcgttgatccgatcgacgtcctcc 135
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.017 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 gcgcggcggcggcaacggcgaggaggag 295 ||||||||||||| |||||||||||||| Sbjct: 20178008 gcgcggcggcggctacggcgaggaggag 20177981 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cccccctcttcttccccggc 135 |||||||||||||||||||| Sbjct: 8061034 cccccctcttcttccccggc 8061053
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 48.1 bits (24), Expect = 0.017 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 gcgcggcggcggcaacggcgaggaggag 295 ||||||||||||| |||||||||||||| Sbjct: 51314 gcgcggcggcggctacggcgaggaggag 51287
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 46.1 bits (23), Expect = 0.066 Identities = 29/31 (93%) Strand = Plus / Plus Query: 248 ggcggcctccctgcgatggcgcgcggcggcg 278 ||||||| ||| ||||||||||||||||||| Sbjct: 2685497 ggcggccacccggcgatggcgcgcggcggcg 2685527
>ref|NM_188046.1| Oryza sativa (japonica cultivar-group), Ozsa8466 predicted mRNA Length = 753 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggaggag 295 ||||||||||| |||||||||||||| Sbjct: 89 gcggcggcggcgacggcgaggaggag 64
>ref|XM_470980.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 642 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 62 gcggcggcggcaacggcgagga 41
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 ccgccctcgtctcctcctcttc 102 |||||||||||||||||||||| Sbjct: 600675 ccgccctcgtctcctcctcttc 600654
>ref|XM_568474.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNM01960) partial mRNA Length = 2738 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 ccgccctcgtctcctcctcttc 102 |||||||||||||||||||||| Sbjct: 406 ccgccctcgtctcctcctcttc 385
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cgcggcggcggcaacggcgagg 290 |||||||||||||||||||||| Sbjct: 69638 cgcggcggcggcaacggcgagg 69617
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cgcggcggcggcaacggcgagg 290 |||||||||||||||||||||| Sbjct: 34863525 cgcggcggcggcaacggcgagg 34863504 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 377463 gcggcggcggcaacggcgagga 377484
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 263 atggcgcgcggcggcggcaacggcga 288 |||||||||||||||||| ||||||| Sbjct: 10458093 atggcgcgcggcggcggcgacggcga 10458068 Score = 40.1 bits (20), Expect = 4.1 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 260 gcgatggcgcgcggcggcggcaacggcgaggaggag 295 ||||||||| ||||||||||| || ||||||||||| Sbjct: 19988946 gcgatggcgagcggcggcggcgac-gcgaggaggag 19988980
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 270 gcggcggcggcaacggcgaggaggag 295 ||||||||||| |||||||||||||| Sbjct: 9328121 gcggcggcggcgacggcgaggaggag 9328146 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 cggcggcggcaacggcgagg 290 |||||||||||||||||||| Sbjct: 39672381 cggcggcggcaacggcgagg 39672362
>gb|AY183410.1| Phytophthora sojae elicitin protein (SOJ2) mRNA, complete cds Length = 702 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 67 gcggcggcggcaacggcgagga 46
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 270 gcggcggcggcaacggcgaggaggag 295 ||||||||||| |||||||||||||| Sbjct: 104715 gcggcggcggcgacggcgaggaggag 104740
>dbj|AK119511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C04, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggaggag 295 ||||||||||| |||||||||||||| Sbjct: 187 gcggcggcggcgacggcgaggaggag 162
>dbj|AK104155.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B08, full insert sequence Length = 1023 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggaggag 295 ||||||||||| |||||||||||||| Sbjct: 85 gcggcggcggcgacggcgaggaggag 60
>dbj|AK104004.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C04, full insert sequence Length = 1190 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cgcggcggcggcaacggcgagg 290 |||||||||||||||||||||| Sbjct: 104 cgcggcggcggcaacggcgagg 83
>dbj|AK073871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075F07, full insert sequence Length = 2028 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cgcggcggcggcaacggcgagg 290 |||||||||||||||||||||| Sbjct: 105 cgcggcggcggcaacggcgagg 84
>dbj|AK073275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025K21, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggaggag 295 ||||||||||| |||||||||||||| Sbjct: 182 gcggcggcggcgacggcgaggaggag 157
>dbj|AK067502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L13, full insert sequence Length = 3413 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 263 atggcgcgcggcggcggcaacggcga 288 |||||||||||||||||| ||||||| Sbjct: 93 atggcgcgcggcggcggcgacggcga 68
>dbj|AK061384.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H09, full insert sequence Length = 1232 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cgcggcggcggcaacggcgagg 290 |||||||||||||||||||||| Sbjct: 139 cgcggcggcggcaacggcgagg 118
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cgcggcggcggcaacggcgagg 290 |||||||||||||||||||||| Sbjct: 43167 cgcggcggcggcaacggcgagg 43146
>gb|DQ229240.1| Phytophthora sojae elicitin-like protein SOJ2D gene, partial cds Length = 400 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 38 gcggcggcggcaacggcgagga 17
>gb|DQ229239.1| Phytophthora sojae elicitin-like protein SOJ2C gene, complete cds Length = 603 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 38 gcggcggcggcaacggcgagga 17
>gb|DQ229238.1| Phytophthora sojae elicitin-like protein SOJ2B gene, complete cds Length = 585 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 38 gcggcggcggcaacggcgagga 17
>gb|DQ229226.1| Phytophthora ramorum elicitin-like protein RAM2D gene, complete cds Length = 324 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 38 gcggcggcggcaacggcgagga 17
>gb|DQ229225.1| Phytophthora ramorum elicitin-like protein RAM2C gene, complete cds Length = 576 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 38 gcggcggcggcaacggcgagga 17
>gb|DQ229224.1| Phytophthora ramorum elicitin-like protein RAM2B gene, complete cds Length = 576 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 38 gcggcggcggcaacggcgagga 17
>gb|DQ229223.1| Phytophthora ramorum elicitin-like protein RAM2A gene, complete cds Length = 576 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 38 gcggcggcggcaacggcgagga 17
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 266 gcgcgcggcggcggcaacggcg 287 |||||||||||||||||||||| Sbjct: 1532477 gcgcgcggcggcggcaacggcg 1532498
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 263 atggcgcgcggcggcggcaacggcga 288 |||||||||||||||||| ||||||| Sbjct: 10457975 atggcgcgcggcggcggcgacggcga 10457950 Score = 40.1 bits (20), Expect = 4.1 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 260 gcgatggcgcgcggcggcggcaacggcgaggaggag 295 ||||||||| ||||||||||| || ||||||||||| Sbjct: 19915160 gcgatggcgagcggcggcggcgac-gcgaggaggag 19915194
>emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb0094I20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130454 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 263 atggcgcgcggcggcggcaacggcga 288 |||||||||||||||||| ||||||| Sbjct: 110594 atggcgcgcggcggcggcgacggcga 110569
>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23, complete sequence Length = 115972 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 62122 gcggcggcggcaacggcgagga 62143
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 270 gcggcggcggcaacggcgagga 291 |||||||||||||||||||||| Sbjct: 16215 gcggcggcggcaacggcgagga 16236
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 cctcgtctcctcctcttccgcctcc 109 ||||||||||||||| ||||||||| Sbjct: 90947 cctcgtctcctcctcctccgcctcc 90923
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 cggcggcggcaacggcgaggaggag 295 ||||| ||||||||||||||||||| Sbjct: 49498 cggcgtcggcaacggcgaggaggag 49474
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 265 ggcgcgcggcggcggcaacggcgaggagg 293 |||||||||||||||| |||| ||||||| Sbjct: 16971 ggcgcgcggcggcggcgacggagaggagg 16999
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 cgcgcggcggcggcaacggcg 287 ||||||||||||||||||||| Sbjct: 108468 cgcgcggcggcggcaacggcg 108448
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 265 ggcgcgcggcggcggcaacggcgaggagg 293 |||||||||||||||| |||| ||||||| Sbjct: 29832490 ggcgcgcggcggcggcgacggagaggagg 29832462
>gb|AC124390.4| Mus musculus BAC clone RP24-434C11 from chromosome 12, complete sequence Length = 162663 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 tctcctcctcttccgcctccc 110 ||||||||||||||||||||| Sbjct: 99593 tctcctcctcttccgcctccc 99613
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 cgcgcggcggcggcaacggcg 287 ||||||||||||||||||||| Sbjct: 1504060 cgcgcggcggcggcaacggcg 1504040
>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence Length = 197420 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 tctcctcctcttccgcctccc 110 ||||||||||||||||||||| Sbjct: 5551 tctcctcctcttccgcctccc 5531
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 cgcgcggcggcggcaacggcg 287 ||||||||||||||||||||| Sbjct: 1087972 cgcgcggcggcggcaacggcg 1087952
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 cggcggcggcaacggcgaggaggag 295 ||||| ||||||||||||||||||| Sbjct: 25314894 cggcgtcggcaacggcgaggaggag 25314870 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 cctcgtctcctcctcttccgcctcc 109 ||||||||||||||| ||||||||| Sbjct: 14460239 cctcgtctcctcctcctccgcctcc 14460215
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 265 ggcgcgcggcggcggcaacggcgaggagg 293 |||||||||||||||| |||| ||||||| Sbjct: 29923912 ggcgcgcggcggcggcgacggagaggagg 29923884
>dbj|AK120330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058L21, full insert sequence Length = 1536 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 cctcgtctcctcctcttccgcctcc 109 ||||||||||||||| ||||||||| Sbjct: 7 cctcgtctcctcctcctccgcctcc 31
>dbj|AK107211.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C02, full insert sequence Length = 1389 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 cggcggcggcaacggcgaggaggag 295 ||||| ||||||||||||||||||| Sbjct: 630 cggcgtcggcaacggcgaggaggag 654
>dbj|AK068575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156N24, full insert sequence Length = 2050 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 265 ggcgcgcggcggcggcaacggcgaggagg 293 |||||||||||||||| |||| ||||||| Sbjct: 90 ggcgcgcggcggcggcgacggagaggagg 62
>ref|XM_511021.1| PREDICTED: Pan troglodytes lin-10 (LOC454152), mRNA Length = 2100 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gcccgggcggcctccctgcg 262 |||||||||||||||||||| Sbjct: 689 gcccgggcggcctccctgcg 670
>gb|AC165356.5| Mus musculus BAC clone RP23-142E18 from chromosome 7, complete sequence Length = 207936 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cagcccccctcttcttcccc 132 |||||||||||||||||||| Sbjct: 92873 cagcccccctcttcttcccc 92854
>ref|XM_483066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1616 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 gcggcggcggcaacggcgaggagg 293 ||||||||||| |||||||||||| Sbjct: 326 gcggcggcggcgacggcgaggagg 349
>ref|XM_463606.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cggcggcggcaacggcgagg 290 |||||||||||||||||||| Sbjct: 39 cggcggcggcaacggcgagg 58
>ref|XM_476874.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1160 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gcgatggcgcgcggcggcgg 279 |||||||||||||||||||| Sbjct: 60 gcgatggcgcgcggcggcgg 41
>ref|XM_506200.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1506_G02.1 patrial mRNA Length = 1161 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gcgatggcgcgcggcggcgg 279 |||||||||||||||||||| Sbjct: 61 gcgatggcgcgcggcggcgg 42
>gb|AY020123.1| Oryza sativa microsatellite MRG2448 containing (CT)X19, genomic sequence Length = 238 Score = 40.1 bits (20), Expect = 4.1 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 260 gcgatggcgcgcggcggcggcaacggcgaggaggag 295 ||||||||| ||||||||||| || ||||||||||| Sbjct: 92 gcgatggcgagcggcggcggcgac-gcgaggaggag 58
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 ggcggcggcaacggcgaggaggag 295 ||||||||| |||||||||||||| Sbjct: 93679 ggcggcggcgacggcgaggaggag 93656
>gb|AC159249.3| Mus musculus BAC clone RP24-177C7 from chromosome y, complete sequence Length = 146406 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tctcctcctcttccgcctcc 109 |||||||||||||||||||| Sbjct: 39985 tctcctcctcttccgcctcc 39966
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cgcgcggcggcggcaacggc 286 |||||||||||||||||||| Sbjct: 54925 cgcgcggcggcggcaacggc 54944
>ref|XM_960738.1| Neurospora crassa OR74A hypothetical protein (NCU00691.1) partial mRNA Length = 2385 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gcaacggcgaggaggagctc 298 |||||||||||||||||||| Sbjct: 1205 gcaacggcgaggaggagctc 1224
>gb|AC150558.1| Drosophila melanogaster clone BACR01N08, complete sequence Length = 174139 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ctcctcctcttccgcctccc 110 |||||||||||||||||||| Sbjct: 147438 ctcctcctcttccgcctccc 147419
>gb|AF241733.2| Homo sapiens chromosome X clone RP1-123H2 map p11.4, complete sequence Length = 133159 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tctcctcctcttccgcctcc 109 |||||||||||||||||||| Sbjct: 36693 tctcctcctcttccgcctcc 36712
>ref|XM_324870.1| Neurospora crassa OR74A hypothetical protein (NCU00691.1) partial mRNA Length = 2385 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gcaacggcgaggaggagctc 298 |||||||||||||||||||| Sbjct: 1205 gcaacggcgaggaggagctc 1224
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cgcgcggcggcggcaacggc 286 |||||||||||||||||||| Sbjct: 858770 cgcgcggcggcggcaacggc 858789
>gb|BC004556.2| Homo sapiens chromosome 16 open reading frame 70, mRNA (cDNA clone MGC:10534 IMAGE:3957147), complete cds Length = 2943 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gcccgggcggcctccctgcg 262 |||||||||||||||||||| Sbjct: 148 gcccgggcggcctccctgcg 129
>gb|AC123871.4| Mus musculus BAC clone RP23-247L8 from chromosome 7, complete sequence Length = 184312 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cagcccccctcttcttcccc 132 |||||||||||||||||||| Sbjct: 122485 cagcccccctcttcttcccc 122466
>emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on chromosome 22q12-13, complete sequence Length = 79528 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ggatccttggccgggcacgg 192 |||||||||||||||||||| Sbjct: 4392 ggatccttggccgggcacgg 4411
>ref|NM_025187.3| Homo sapiens chromosome 16 open reading frame 70 (C16orf70), mRNA Length = 2943 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gcccgggcggcctccctgcg 262 |||||||||||||||||||| Sbjct: 148 gcccgggcggcctccctgcg 129
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggagg 293 ||||||||||| |||||||||||| Sbjct: 60520 gcggcggcggcgacggcgaggagg 60497
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cgcgcggcggcggcaacggc 286 |||||||||||||||||||| Sbjct: 701193 cgcgcggcggcggcaacggc 701212
>gb|AC182629.3| Mus musculus BAC clone RP24-573O8 from chromosome 7, complete sequence Length = 168009 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cagcccccctcttcttcccc 132 |||||||||||||||||||| Sbjct: 59807 cagcccccctcttcttcccc 59788
>gb|AC142261.5| Mus musculus BAC clone RP24-469C3 from chromosome unknown, complete sequence Length = 179858 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tctcctcctcttccgcctcc 109 |||||||||||||||||||| Sbjct: 44261 tctcctcctcttccgcctcc 44242
>gb|AF161800.2| Homo sapiens chromosome 8 clone XX-189M5 map 8q24.2, complete sequence Length = 62054 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 atggcgcgcggcggcggcaacggc 286 ||||||||||||||||||| |||| Sbjct: 20807 atggcgcgcggcggcggcagcggc 20784
>gb|AF159227.7| Homo sapiens chromosome 8 clone GS1-225N9 map 8q24.2, complete sequence Length = 109219 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 atggcgcgcggcggcggcaacggc 286 ||||||||||||||||||| |||| Sbjct: 69749 atggcgcgcggcggcggcagcggc 69726
>gb|AE005926.1| Caulobacter crescentus CB15 section 252 of 359 of the complete genome Length = 10961 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cggcggcggcaacggcgagg 290 |||||||||||||||||||| Sbjct: 8425 cggcggcggcaacggcgagg 8444
>gb|AC083843.5| Homo sapiens chromosome 8, clone RP11-157B5, complete sequence Length = 159032 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 atggcgcgcggcggcggcaacggc 286 ||||||||||||||||||| |||| Sbjct: 25345 atggcgcgcggcggcggcagcggc 25322
>gb|AF176088.1|AF176088 Homo sapiens lin-10-like protein mRNA, complete cds Length = 1353 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gcccgggcggcctccctgcg 262 |||||||||||||||||||| Sbjct: 68 gcccgggcggcctccctgcg 49
>gb|AC093177.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone BACR33A07, complete sequence Length = 174726 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ctcctcctcttccgcctccc 110 |||||||||||||||||||| Sbjct: 85114 ctcctcctcttccgcctccc 85133
>gb|AC092398.1|AC092398 Drosophila melanogaster, chromosome 2L, region 36X-36X, BAC clone BACR03G19, complete sequence Length = 165839 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ctcctcctcttccgcctccc 110 |||||||||||||||||||| Sbjct: 147438 ctcctcctcttccgcctccc 147419
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 tggcgcgcggcggcggcaacggcg 287 ||||| |||||||||||||||||| Sbjct: 2523573 tggcgagcggcggcggcaacggcg 2523596
>gb|M91448.1|CCRFLGICHL Caulobacter crescentus DskA (dskA) gene, partial cds; FliX (fliX), flagellin (flgI), and chemotactic response protein (cheL) genes, complete cds; and flagellar assembly-associated protein (flbY) gene, partial cds Length = 2746 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cggcggcggcaacggcgagg 290 |||||||||||||||||||| Sbjct: 2414 cggcggcggcaacggcgagg 2433
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 ggcggcggcaacggcgaggaggag 295 ||||||||| |||||||||||||| Sbjct: 8924548 ggcggcggcgacggcgaggaggag 8924571
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggagg 293 ||||||||||| |||||||||||| Sbjct: 18699242 gcggcggcggcgacggcgaggagg 18699219
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggagg 293 ||||||||||| |||||||||||| Sbjct: 24127137 gcggcggcggcgacggcgaggagg 24127114
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gcgatggcgcgcggcggcgg 279 |||||||||||||||||||| Sbjct: 4365735 gcgatggcgcgcggcggcgg 4365754
>gb|AC074143.5| Homo sapiens chromosome 16 clone RP11-5A19, complete sequence Length = 152952 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gcccgggcggcctccctgcg 262 |||||||||||||||||||| Sbjct: 78795 gcccgggcggcctccctgcg 78776
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 cggcggcggcaacggcgagg 290 |||||||||||||||||||| Sbjct: 153337 cggcggcggcaacggcgagg 153318
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggcggcggcaacggcgag 289 |||||||||||||||||||| Sbjct: 4965831 gcggcggcggcaacggcgag 4965850
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggcgcgcggcggcggcaacggcga 288 |||||||| ||||||||||||||| Sbjct: 4349388 ggcgcgcgccggcggcaacggcga 4349411
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 cggcggcggcaacggcgagg 290 |||||||||||||||||||| Sbjct: 23280 cggcggcggcaacggcgagg 23261
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cccccctcttcttccccggc 135 |||||||||||||||||||| Sbjct: 49227 cccccctcttcttccccggc 49246
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gcgatggcgcgcggcggcgg 279 |||||||||||||||||||| Sbjct: 5584 gcgatggcgcgcggcggcgg 5603
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggagg 293 ||||||||||| |||||||||||| Sbjct: 80623 gcggcggcggcgacggcgaggagg 80600
>dbj|AK109668.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A08, full insert sequence Length = 1616 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 gcggcggcggcaacggcgaggagg 293 ||||||||||| |||||||||||| Sbjct: 326 gcggcggcggcgacggcgaggagg 349
>dbj|AK104002.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-G11, full insert sequence Length = 1256 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gcgatggcgcgcggcggcgg 279 |||||||||||||||||||| Sbjct: 60 gcgatggcgcgcggcggcgg 41
>dbj|AK101966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H08, full insert sequence Length = 997 Score = 40.1 bits (20), Expect = 4.1 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 260 gcgatggcgcgcggcggcggcaacggcgaggaggag 295 ||||||||| ||||||||||| || ||||||||||| Sbjct: 63 gcgatggcgagcggcggcggcgac-gcgaggaggag 97
>dbj|AK066734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078I01, full insert sequence Length = 1257 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gcgatggcgcgcggcggcgg 279 |||||||||||||||||||| Sbjct: 61 gcgatggcgcgcggcggcgg 42
>gb|AE003651.2| Drosophila melanogaster chromosome 2L, section 60 of 83 of the complete sequence Length = 254646 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ctcctcctcttccgcctccc 110 |||||||||||||||||||| Sbjct: 74278 ctcctcctcttccgcctccc 74259
>dbj|AB074880.1| Chlamydomonas reinhardtii PTB1 mRNA for putative Pi-transporter homologue B1, complete cds Length = 6032 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgag 289 |||||||||||||||||||| Sbjct: 3461 gcggcggcggcaacggcgag 3442
>gb|AC113936.16| Mus musculus chromosome 10, clone RP23-9F21, complete sequence Length = 205086 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tctcctcctcttccgcctcc 109 |||||||||||||||||||| Sbjct: 151506 tctcctcctcttccgcctcc 151487
>gb|AC102480.8| Mus musculus chromosome 3, clone RP24-423L4, complete sequence Length = 189940 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 gccctcgtctcctcctcttccgcctccc 110 |||||| |||||||||||||| |||||| Sbjct: 127978 gccctcctctcctcctcttcctcctccc 128005
>gb|AC174380.3| Mus musculus BAC clone RP24-196H4 from chromosome 7, complete sequence Length = 173395 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cagcccccctcttcttcccc 132 |||||||||||||||||||| Sbjct: 16181 cagcccccctcttcttcccc 16162
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gcggcggcggcaacggcgaggagg 293 ||||||||||| |||||||||||| Sbjct: 18710095 gcggcggcggcgacggcgaggagg 18710072
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 ggcggcggcaacggcgaggaggag 295 ||||||||| |||||||||||||| Sbjct: 8996211 ggcggcggcgacggcgaggaggag 8996234
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 4.1 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 260 gcgatggcgcgcggcggcggcaacggcgaggaggag 295 ||||||||| ||||||||||| || ||||||||||| Sbjct: 38314 gcgatggcgagcggcggcggcgac-gcgaggaggag 38280
>gb|AC148329.3| Mus musculus BAC clone RP24-176F13 from Y, complete sequence Length = 149159 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tctcctcctcttccgcctcc 109 |||||||||||||||||||| Sbjct: 84663 tctcctcctcttccgcctcc 84644 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,342,367 Number of Sequences: 3902068 Number of extensions: 2342367 Number of successful extensions: 90812 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 87057 Number of HSP's gapped (non-prelim): 3761 length of query: 309 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 287 effective length of database: 17,147,199,772 effective search space: 4921246334564 effective search space used: 4921246334564 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)