| Clone Name | baet95b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 tggtggatgttctttggatttgatg 113 ||||||||||||||||| ||||||| Sbjct: 40890 tggtggatgttctttgggtttgatg 40866
>gb|AC147839.2| Xenopus tropicalis clone CH216-9N23, complete sequence Length = 184473 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 aacaagcctagcacactctca 177 ||||||||||||||||||||| Sbjct: 11482 aacaagcctagcacactctca 11502
>ref|NM_123122.2| Arabidopsis thaliana EMB2656 AT5G37630 (EMB2656) mRNA, complete cds Length = 3375 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ttgttctgatggtttcagat 305 |||||||||||||||||||| Sbjct: 2679 ttgttctgatggtttcagat 2660
>gb|AC129588.10| Mus musculus chromosome 3, clone RP23-296L7, complete sequence Length = 180845 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tggtttcagattctcaaatg 314 |||||||||||||||||||| Sbjct: 172269 tggtttcagattctcaaatg 172250
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ctgaagcaagagcacaagga 59 |||||||||||||||||||| Sbjct: 1847856 ctgaagcaagagcacaagga 1847875
>gb|AC102849.5| Mus musculus, clone RP24-423P7, complete sequence Length = 162547 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tggtttcagattctcaaatg 314 |||||||||||||||||||| Sbjct: 6779 tggtttcagattctcaaatg 6760
>gb|AC099533.36| Pan troglodytes clone rp43-41g5, complete sequence Length = 226331 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 caacagccccaagtcattag 257 |||||||||||||||||||| Sbjct: 217903 caacagccccaagtcattag 217884
>emb|AL049845.7|HSJ485C17 Human DNA sequence from clone RP3-485C17 on chromosome 6q12-13 Contains a novel gene and the 3' part of a novel gene, complete sequence Length = 92854 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 tttcagattctcaaatgcac 317 |||||||||||||||||||| Sbjct: 41878 tttcagattctcaaatgcac 41859
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ctgaagcaagagcacaagga 59 |||||||||||||||||||| Sbjct: 1832420 ctgaagcaagagcacaagga 1832439
>gb|AC091042.6| Homo sapiens chromosome 18, clone RP11-563H6, complete sequence Length = 149173 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 aacaagcctagcacactctc 176 |||||||||||||||||||| Sbjct: 86503 aacaagcctagcacactctc 86522
>dbj|BS000051.1| Pan troglodytes chromosome 22 clone:RP43-089B14, map 22, complete sequences Length = 165502 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctttggtgatttcagatcctgaag 45 |||||||||||||||| ||||||| Sbjct: 93651 ctttggtgatttcagaccctgaag 93628
>dbj|AB018107.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K12B20 Length = 78874 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ttgttctgatggtttcagat 305 |||||||||||||||||||| Sbjct: 32650 ttgttctgatggtttcagat 32631
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 atcctgaagcaagagcacaa 56 |||||||||||||||||||| Sbjct: 395287 atcctgaagcaagagcacaa 395306
>emb|AL645928.9| Mouse DNA sequence from clone RP23-185J21 on chromosome 11, complete sequence Length = 158913 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tggatgttctttggatttga 111 |||||||||||||||||||| Sbjct: 67797 tggatgttctttggatttga 67816 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,719,275 Number of Sequences: 3902068 Number of extensions: 3719275 Number of successful extensions: 66825 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66767 Number of HSP's gapped (non-prelim): 58 length of query: 403 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 381 effective length of database: 17,147,199,772 effective search space: 6533083113132 effective search space used: 6533083113132 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)