ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet95a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor ... 113 2e-25
2ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor ... 105 5e-23
3ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor ... 103 2e-22
4ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor ... 92 7e-19
5NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter ... 39 0.004
6FRAH_ANASP (P46017) Protein fraH 34 0.13
7PRPE_SALTY (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propio... 30 2.5
8YOT2_CAEEL (P34648) Hypothetical protein ZK632.2 29 4.2
9AROB_BUCAI (P57604) 3-dehydroquinate synthase (EC 4.2.3.4) 28 7.2
10PRPE_ECOLI (P77495) Propionate--CoA ligase (EC 6.2.1.17) (Propio... 28 7.2
11DMA1_SCHPO (Q10322) Protein dma1 28 7.2
12PYR1_DICDI (P20054) Protein PYR1-3 [Includes: Glutamine-dependen... 28 7.2
13XYLT1_CANFA (Q5QQ56) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyl... 28 9.4

>ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 663

 Score =  113 bits (283), Expect = 2e-25
 Identities = 59/115 (51%), Positives = 69/115 (60%)
 Frame = +1

Query: 1   LIRDEQRTLSIGXXXXXXXXXXXXXXXXXQVSEIRATITCKNKGFYLTDLGSEHGTWFND 180
           L RDE    +IG                 QVSE+ A I+ K   F++TDL SEHGTW  D
Sbjct: 549 LSRDENMPCNIGSVSHANIPGKSVVIPLPQVSEMHARISYKGGAFFVTDLRSEHGTWITD 608

Query: 181 NEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRVKVLSALPYDSARGGGEVLQAA 345
           NEGRRYR  PNFP RFHPSD IEFGSDKKA FRVKV+   P  +A+   + + AA
Sbjct: 609 NEGRRYRASPNFPTRFHPSDIIEFGSDKKAAFRVKVMKFPPKTAAKEERQAVGAA 663



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>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 669

 Score =  105 bits (262), Expect = 5e-23
 Identities = 53/97 (54%), Positives = 61/97 (62%)
 Frame = +1

Query: 1   LIRDEQRTLSIGXXXXXXXXXXXXXXXXXQVSEIRATITCKNKGFYLTDLGSEHGTWFND 180
           L RDE    ++G                 QVSE+ A I+CK+  F++TDL SEHGTW  D
Sbjct: 555 LSRDEDVPCTVGSISHTNIPGKSIVLPLPQVSEMHARISCKDGAFFVTDLRSEHGTWVTD 614

Query: 181 NEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRVKVL 291
           NEGRRYR  PNFP RFHPSD IEFGSD KA FRVK +
Sbjct: 615 NEGRRYRTSPNFPTRFHPSDVIEFGSD-KAAFRVKAM 650



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>ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (PA-ZE)
          Length = 661

 Score =  103 bits (257), Expect = 2e-22
 Identities = 59/115 (51%), Positives = 69/115 (60%)
 Frame = +1

Query: 1   LIRDEQRTLSIGXXXXXXXXXXXXXXXXXQVSEIRATITCKNKGFYLTDLGSEHGTWFND 180
           L RDE+    IG                 QVSE+ A I+ K+  FYLTDL SEHGTW  D
Sbjct: 550 LNRDEKNPCIIGSAPHGDVSGISIAIPKPQVSEMHARISYKDGAFYLTDLRSEHGTWIAD 609

Query: 181 NEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRVKVLSALPYDSARGGGEVLQAA 345
            EG+RYR+PPNFP RF PSDAIE GS K A FRVKV+ + P    + G  +LQAA
Sbjct: 610 IEGKRYRVPPNFPARFRPSDAIEIGSQKVA-FRVKVMKSSPGSVEKEG--ILQAA 661



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>ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (Xanthophyll epoxidase) (Beta-cyclohexenyl
           epoxidase)
          Length = 660

 Score = 91.7 bits (226), Expect = 7e-19
 Identities = 50/115 (43%), Positives = 63/115 (54%)
 Frame = +1

Query: 1   LIRDEQRTLSIGXXXXXXXXXXXXXXXXXQVSEIRATITCKNKGFYLTDLGSEHGTWFND 180
           L RDE    +IG                 QVS++ A I+     F  T   S+HGTWF D
Sbjct: 547 LSRDENMPCTIGSVSHANIPGKSVVIPLSQVSDMHARISYNGGAFLGTAFRSDHGTWFID 606

Query: 181 NEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRVKVLSALPYDSARGGGEVLQAA 345
           NEGRRYR+ PNFP+RFH SD I FGSD KA FR+K +   P  +A+   + + AA
Sbjct: 607 NEGRRYRVSPNFPMRFHSSDVIVFGSD-KAAFRIKAMKFAPKTAAKEDRQAVGAA 660



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>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)|
           (Solute carrier family 4 anion exchanger member 1
           adapter protein) (Lung cancer oncogene 3 protein)
          Length = 796

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +1

Query: 130 GFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKK 267
           GFYL DLGS HGT+ N     + R+PP    R H    + FG   +
Sbjct: 230 GFYLYDLGSTHGTFLN-----KTRIPPRTYCRVHVGHVVRFGGSTR 270



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>FRAH_ANASP (P46017) Protein fraH|
          Length = 289

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +1

Query: 91  VSEIRATITCKNKGFYLTDLGSEHGTWFND---NEGRRYRLPPNFPVRFHPSDAIEF 252
           VS + A I  +    Y+ D+GS +GT+ N+     G R+RL P   +     D + F
Sbjct: 228 VSRVHADIRLEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 284



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>PRPE_SALTY (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propionyl-CoA|
           synthetase)
          Length = 628

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = -3

Query: 373 DKGWLKSPLMLPAELLPRLSPSRMGAR*APSPGTWPSCLNQTRWHPKGENEPGSLEVTG 197
           + GW   P+M  A  L    PSR+G+   P  G     LN+    P G NE G L + G
Sbjct: 390 ESGW---PIMALARALDD-RPSRLGSPGVPMYGYNVQLLNEVTGEPCGINEKGMLVIEG 444



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>YOT2_CAEEL (P34648) Hypothetical protein ZK632.2|
          Length = 710

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +1

Query: 127 KGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKKAM 273
           KG+++ +LGS HG+  N     + RLPP   +R       +FG   + +
Sbjct: 145 KGWHIFELGSTHGSRMN-----KKRLPPKQYIRTRVGFIFQFGESTRIL 188



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>AROB_BUCAI (P57604) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 363

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +3

Query: 18  EDTLYWKQTRSEQF*FFVVVALATSIRDPCYYHMQEQGFLFDR 146
           ED ++W     +Q        LA  ++D  +YH+++ G   D+
Sbjct: 27  EDDIFWPLKPGDQAMLVTNKTLANLLKDKVFYHLRKSGIKIDQ 69



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>PRPE_ECOLI (P77495) Propionate--CoA ligase (EC 6.2.1.17) (Propionyl-CoA|
           synthetase)
          Length = 628

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = -3

Query: 373 DKGWLKSPLMLPAELLPRLSPSRMGAR*APSPGTWPSCLNQTRWHPKGENEPGSLEVTG 197
           + GW   P+M  A  L    P+R+G+   P  G     LN+    P G NE G L V G
Sbjct: 390 ESGW---PIMAIARGLDD-RPTRLGSPGVPMYGYNVQLLNEVTGEPCGVNEKGMLVVEG 444



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>DMA1_SCHPO (Q10322) Protein dma1|
          Length = 267

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +1

Query: 91  VSEIRATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPP----NFPVRFHPSDAIEFGS 258
           VS   A I  +N  +Y+ D+GS  GT+ N       RL P    + P     +D ++ G+
Sbjct: 84  VSRRHAQIFYENNTWYIQDMGSSSGTFLN-----HVRLSPPSKTSKPYPISNNDILQLGA 138

Query: 259 D 261
           D
Sbjct: 139 D 139



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>PYR1_DICDI (P20054) Protein PYR1-3 [Includes: Glutamine-dependent|
           carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate
           carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC
           3.5.2.3)]
          Length = 2185

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
 Frame = +1

Query: 103 RATITCKNKGFYLTD----LGSEHGTWF---ND--NEGRRYRLPPNFPVRFHPSDAIEFG 255
           R  IT +N GF +       GS   T+F   ND  NEG  +   P F V+FHP +A+   
Sbjct: 271 RCHITSQNHGFVIDSNSLPAGSGWKTYFINANDASNEGIYHESKPWFSVQFHP-EAMAGP 329

Query: 256 SDKKAMF 276
           +D + +F
Sbjct: 330 TDTEYLF 336



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>XYLT1_CANFA (Q5QQ56) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)|
           (Peptide O-xylosyltransferase 1)
          Length = 950

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 293 ARSHTTRREAGEKFCRQHEWGLQPPLVTSHCSI 391
           A+S   R+E G+ +CR     L P  VT  CS+
Sbjct: 260 AKSKHCRQEIGDTYCRHKLGMLMPKKVTRFCSL 292


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,822,961
Number of Sequences: 219361
Number of extensions: 1254862
Number of successful extensions: 3012
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3011
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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