ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet94h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
2dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
3dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
4dbj|AK102831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
5dbj|AK064384.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
6gb|AY109372.1| Zea mays CL7007_1 mRNA sequence 92 2e-15
7dbj|AK108753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
8emb|CR318657.8| Zebrafish DNA sequence from clone DKEY-114G7 in ... 44 0.37
9emb|AL929103.7| Zebrafish DNA sequence from clone CH211-122O8, c... 44 0.37
10gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 44 0.37
11gb|AE005838.1| Caulobacter crescentus CB15 section 164 of 359 of... 42 1.5
12emb|AJ330650.1|HSA330650 Homo sapiens genomic sequence surroundi... 42 1.5
13gb|AE010324.1| Methanopyrus kandleri AV19 section 23 of 157 of t... 40 5.8
14ref|XM_479440.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
15ref|XM_515533.1| PREDICTED: Pan troglodytes adducin 2 (LOC459305... 40 5.8
16gb|AC105980.13| Mus musculus chromosome 3, clone RP24-234E11, co... 40 5.8
17gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 40 5.8
18gb|BC077347.1| Xenopus laevis hypothetical protein LOC445855, mR... 40 5.8
19ref|NM_017488.2| Homo sapiens adducin 2 (beta) (ADD2), transcrip... 40 5.8
20ref|NM_017483.2| Homo sapiens adducin 2 (beta) (ADD2), transcrip... 40 5.8
21ref|NM_001617.2| Homo sapiens adducin 2 (beta) (ADD2), transcrip... 40 5.8
22gb|BC065525.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone M... 40 5.8
23ref|XM_754067.1| Ustilago maydis 521 hypothetical protein (UM030... 40 5.8
24gb|BC051882.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone I... 40 5.8
25gb|AC109233.10| Mus musculus chromosome 16, clone RP23-219N5, co... 40 5.8
26gb|BC011416.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone I... 40 5.8
27gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, comple... 40 5.8
28gb|BC056881.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone I... 40 5.8
29gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 5.8
30gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.8
31ref|NM_178721.2| Mus musculus immunoglobulin superfamily, member... 40 5.8
32gb|DQ272744.1| Rattus norvegicus nectin-like protein 3 mRNA, com... 40 5.8
33emb|CR860745.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0727 (from cl... 40 5.8
34gb|AE005767.1| Caulobacter crescentus CB15 section 93 of 359 of ... 40 5.8
35emb|CR590670.1| full-length cDNA clone CS0DM006YC12 of Fetal liv... 40 5.8
36dbj|AK163636.1| Mus musculus 6 days neonate medulla oblongata cD... 40 5.8
37gb|BC010237.1|BC010237 Homo sapiens, adducin 2 (beta), clone IMA... 40 5.8
38dbj|AK165030.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 5.8
39gb|S81083.1|S81077S3 beta -ADD=adducin beta subunit 63 kda isofo... 40 5.8
40dbj|AK046800.1| Mus musculus 10 days neonate medulla oblongata c... 40 5.8
41gb|BC008709.1|BC008709 Homo sapiens, Similar to adducin 2 (beta)... 40 5.8
42dbj|AK038842.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 5.8
43gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 5.8
44dbj|AK033973.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 5.8
45dbj|AK043760.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 5.8
46gb|M69228.1|CCRFLBDBA Caulobacter crescentus putative (fliN) gen... 40 5.8
47gb|M32065.1|CCRFLBD Caulobacter crescentus transcription activat... 40 5.8
48dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, comple... 40 5.8
50ref|XM_340958.2| PREDICTED: Rattus norvegicus immunoglobulin sup... 40 5.8
51dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.8
52dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
53gb|AC153863.6| Mus musculus 10 BAC RP23-149M7 (Roswell Park Canc... 40 5.8
54dbj|AK073297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
55gb|BC041666.1| Homo sapiens adducin 2 (beta), transcript variant... 40 5.8
56emb|AM087403.1| Streptomyces venezuelae pSVH1 plasmid 40 5.8
57gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.8
58gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.8
59gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, comple... 40 5.8
60gb|U43959.1|HSU43959 Human beta 4 adducin mRNA, alternatively sp... 40 5.8
61emb|X58199.1|HSBADD Human mRNA for beta adducin 40 5.8
62gb|M30946.1|CCRFTRCX C.crescentus transcriptional protein (ftrC)... 40 5.8 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                            
Query: 254      gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctccacaa 313
                |||||||||| |||||||||||||||||  ||||||||||  |||||||||||||| |||
Sbjct: 29571362 gccggagtgcatcaactcgtcgaacccgttccacgagtgctccgactactgcctccgcaa 29571421

                                
Query: 314      gatcgccgaggccaag 329
                ||||||||||||||||
Sbjct: 29571422 gatcgccgaggccaag 29571437



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 372      ccggaggaccgcaccgtgcaccctgactgtatcaacgcctccaacccctacca 424
                |||| |||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 29571465 ccggtggaccgcaccgtccaccccgactgcatcaacgcctccaacccctacca 29571517



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 254      gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctcc 309
                |||||| |||||||||||||||||||||  ||||||||||  ||||||||||||||
Sbjct: 29558827 gccggattgcgtcaactcgtcgaacccgtaccacgagtgctccgactactgcctcc 29558882



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 397      actgtatcaacgcctccaacccctacca 424
                |||| |||||||||||||||||||||||
Sbjct: 29558937 actgcatcaacgcctccaacccctacca 29558964
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>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1663_H12
          Length = 125422

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                         
Query: 254   gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctccacaa 313
             |||||||||| |||||||||||||||||  ||||||||||  |||||||||||||| |||
Sbjct: 14947 gccggagtgcatcaactcgtcgaacccgttccacgagtgctccgactactgcctccgcaa 15006

                             
Query: 314   gatcgccgaggccaag 329
             ||||||||||||||||
Sbjct: 15007 gatcgccgaggccaag 15022



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 372   ccggaggaccgcaccgtgcaccctgactgtatcaacgcctccaacccctacca 424
             |||| |||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 15050 ccggtggaccgcaccgtccaccccgactgcatcaacgcctccaacccctacca 15102



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                    
Query: 254  gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctcc 309
            |||||| |||||||||||||||||||||  ||||||||||  ||||||||||||||
Sbjct: 2412 gccggattgcgtcaactcgtcgaacccgtaccacgagtgctccgactactgcctcc 2467



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 397  actgtatcaacgcctccaacccctacca 424
            |||| |||||||||||||||||||||||
Sbjct: 2522 actgcatcaacgcctccaacccctacca 2549
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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0655A07
          Length = 172473

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                          
Query: 254    gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctccacaa 313
              |||||||||| |||||||||||||||||  ||||||||||  |||||||||||||| |||
Sbjct: 135868 gccggagtgcatcaactcgtcgaacccgttccacgagtgctccgactactgcctccgcaa 135927

                              
Query: 314    gatcgccgaggccaag 329
              ||||||||||||||||
Sbjct: 135928 gatcgccgaggccaag 135943



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                   
Query: 372    ccggaggaccgcaccgtgcaccctgactgtatcaacgcctccaacccctacca 424
              |||| |||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 135971 ccggtggaccgcaccgtccaccccgactgcatcaacgcctccaacccctacca 136023



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                      
Query: 254    gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctcc 309
              |||||| |||||||||||||||||||||  ||||||||||  ||||||||||||||
Sbjct: 123333 gccggattgcgtcaactcgtcgaacccgtaccacgagtgctccgactactgcctcc 123388



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 397    actgtatcaacgcctccaacccctacca 424
              |||| |||||||||||||||||||||||
Sbjct: 123443 actgcatcaacgcctccaacccctacca 123470
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>dbj|AK102831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109G07, full
           insert sequence
          Length = 1312

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                       
Query: 254 gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctccacaa 313
           |||||||||| |||||||||||||||||  ||||||||||  |||||||||||||| |||
Sbjct: 72  gccggagtgcatcaactcgtcgaacccgttccacgagtgctccgactactgcctccgcaa 131

                           
Query: 314 gatcgccgaggccaag 329
           ||||||||||||||||
Sbjct: 132 gatcgccgaggccaag 147



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                
Query: 372 ccggaggaccgcaccgtgcaccctgactgtatcaacgcctccaacccctacca 424
           |||| |||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 175 ccggtggaccgcaccgtccaccccgactgcatcaacgcctccaacccctacca 227
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>dbj|AK064384.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E04, full
           insert sequence
          Length = 1353

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                       
Query: 254 gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctccacaa 313
           |||||||||| |||||||||||||||||  ||||||||||  |||||||||||||| |||
Sbjct: 99  gccggagtgcatcaactcgtcgaacccgttccacgagtgctccgactactgcctccgcaa 158

                           
Query: 314 gatcgccgaggccaag 329
           ||||||||||||||||
Sbjct: 159 gatcgccgaggccaag 174



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                
Query: 372 ccggaggaccgcaccgtgcaccctgactgtatcaacgcctccaacccctacca 424
           |||| |||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 202 ccggtggaccgcaccgtccaccccgactgcatcaacgcctccaacccctacca 254
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>gb|AY109372.1| Zea mays CL7007_1 mRNA sequence
          Length = 1445

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                       
Query: 254 gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctccacaa 313
           |||||||||| |||||||||| ||||||  |||||||||||  ||||||||||||| |||
Sbjct: 91  gccggagtgcatcaactcgtccaacccgtaccacgagtgcactgactactgcctccgcaa 150

                         
Query: 314 gatcgccgaggcca 327
           ||||||||||||||
Sbjct: 151 gatcgccgaggcca 164



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 396 gactgtatcaacgcctccaacccctacca 424
           ||||| |||||||||| ||||||||||||
Sbjct: 233 gactgcatcaacgcctgcaacccctacca 261
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>dbj|AK108753.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-F09, full
           insert sequence
          Length = 720

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 254 gccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgactactgcctcc 309
           |||||| |||||||||||||||||||||  ||||||||||  ||||||||||||||
Sbjct: 132 gccggattgcgtcaactcgtcgaacccgtaccacgagtgctccgactactgcctcc 187



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 397 actgtatcaacgcctccaacccctacca 424
           |||| |||||||||||||||||||||||
Sbjct: 242 actgcatcaacgcctccaacccctacca 269
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>emb|CR318657.8| Zebrafish DNA sequence from clone DKEY-114G7 in linkage group 20,
             complete sequence
          Length = 151250

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 117   cgccggcgctgctcctcctccctccc 142
             |||| |||||||||||||||||||||
Sbjct: 43744 cgcccgcgctgctcctcctccctccc 43719
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>emb|AL929103.7| Zebrafish DNA sequence from clone CH211-122O8, complete sequence
          Length = 168630

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 117   cgccggcgctgctcctcctccctccc 142
             |||| |||||||||||||||||||||
Sbjct: 74627 cgcccgcgctgctcctcctccctccc 74602
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 334    gcctcctcgaagaagcccccga 355
              ||||||||||||||||||||||
Sbjct: 712452 gcctcctcgaagaagcccccga 712473
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>gb|AE005838.1| Caulobacter crescentus CB15 section 164 of 359 of the complete genome
          Length = 9979

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 315  atcgccgaggccaagcgccgc 335
            |||||||||||||||||||||
Sbjct: 2468 atcgccgaggccaagcgccgc 2488
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>emb|AJ330650.1|HSA330650 Homo sapiens genomic sequence surrounding NotI site, clone
           NB1-1069S
          Length = 741

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 gccggcgctgctcctcctccc 138
           |||||||||||||||||||||
Sbjct: 534 gccggcgctgctcctcctccc 554
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>gb|AE010324.1| Methanopyrus kandleri AV19 section 23 of 157 of the complete genome
          Length = 10264

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  cgcgaaccagctcgatgggc 245
            ||||||||||||||||||||
Sbjct: 2303 cgcgaaccagctcgatgggc 2284
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>ref|XM_479440.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 gccggcgctgctcctcctcc 137
           ||||||||||||||||||||
Sbjct: 142 gccggcgctgctcctcctcc 161
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>ref|XM_515533.1| PREDICTED: Pan troglodytes adducin 2 (LOC459305), mRNA
          Length = 6774

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 6561 ctgctcctcctccctcccgt 6542
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>gb|AC105980.13| Mus musculus chromosome 3, clone RP24-234E11, complete sequence
          Length = 171161

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 218    ccaagacgcgcgaaccagctcgat 241
              |||||| |||||||||||||||||
Sbjct: 113596 ccaagaagcgcgaaccagctcgat 113573
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cccggcgctccgcctccgcg 166
             ||||||||||||||||||||
Sbjct: 45085 cccggcgctccgcctccgcg 45104
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>gb|BC077347.1| Xenopus laevis hypothetical protein LOC445855, mRNA (cDNA clone
           IMAGE:6317108), partial cds
          Length = 1773

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 agcagatccgccgcctcgaa 215
           ||||||||||||||||||||
Sbjct: 407 agcagatccgccgcctcgaa 426
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>ref|NM_017488.2| Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-4, mRNA
          Length = 4043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2519 ctgctcctcctccctcccgt 2500
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>ref|NM_017483.2| Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-3a,
            mRNA
          Length = 3039

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 1515 ctgctcctcctccctcccgt 1496
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>ref|NM_001617.2| Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-1, mRNA
          Length = 3957

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2433 ctgctcctcctccctcccgt 2414
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>gb|BC065525.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone MGC:74968
            IMAGE:6142886), complete cds
          Length = 3777

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2233 ctgctcctcctccctcccgt 2214
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>ref|XM_754067.1| Ustilago maydis 521 hypothetical protein (UM03013.1) partial mRNA
          Length = 4215

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 390  caccctgactgtatcaacgc 409
            ||||||||||||||||||||
Sbjct: 3673 caccctgactgtatcaacgc 3692
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>gb|BC051882.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone IMAGE:6142945),
            partial cds
          Length = 2561

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2406 ctgctcctcctccctcccgt 2387
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>gb|AC109233.10| Mus musculus chromosome 16, clone RP23-219N5, complete sequence
          Length = 271253

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 218    ccaagacgcgcgaaccagctcgat 241
              |||||| |||||||||||||||||
Sbjct: 216007 ccaagaagcgcgaaccagctcgat 216030
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>gb|BC011416.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone IMAGE:3875231), with
            apparent retained intron
          Length = 2226

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2069 ctgctcctcctccctcccgt 2050
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>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence
          Length = 183554

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 319   ccgaggccaagcgccgcctcctcgaagaagcccccg 354
             |||||||| ||| ||||||||||| ||| |||||||
Sbjct: 94655 ccgaggccgagccccgcctcctcggagacgcccccg 94620
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>gb|BC056881.1| Homo sapiens adducin 2 (beta), mRNA (cDNA clone IMAGE:6139987),
            partial cds
          Length = 2417

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2262 ctgctcctcctccctcccgt 2243
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     gccgaggccaagcgccgcct 337
               ||||||||||||||||||||
Sbjct: 2647243 gccgaggccaagcgccgcct 2647224
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     gcgccgcctcctcgaagaag 348
               ||||||||||||||||||||
Sbjct: 1879700 gcgccgcctcctcgaagaag 1879681
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>ref|NM_178721.2| Mus musculus immunoglobulin superfamily, member 4 (Igsf4d), mRNA
          Length = 3892

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 935 ccaagaagcgcgaaccagctcgat 912
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>gb|DQ272744.1| Rattus norvegicus nectin-like protein 3 mRNA, complete cds
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 252 ccaagaagcgcgaaccagctcgat 229
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>emb|CR860745.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0727 (from clone DKFZp459M0727)
          Length = 4511

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2018 ctgctcctcctccctcccgt 1999
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>gb|AE005767.1| Caulobacter crescentus CB15 section 93 of 359 of the complete genome
          Length = 7840

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  gccgaggccaagcgccgcct 337
            ||||||||||||||||||||
Sbjct: 7273 gccgaggccaagcgccgcct 7292
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>emb|CR590670.1| full-length cDNA clone CS0DM006YC12 of Fetal liver of Homo sapiens
            (human)
          Length = 2414

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2258 ctgctcctcctccctcccgt 2239
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>dbj|AK163636.1| Mus musculus 6 days neonate medulla oblongata cDNA, RIKEN
           full-length enriched library, clone:B730024M20
           product:immunoglobulin superfamily, member 4, full
           insert sequence
          Length = 2612

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 933 ccaagaagcgcgaaccagctcgat 910
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>gb|BC010237.1|BC010237 Homo sapiens, adducin 2 (beta), clone IMAGE:4153471, mRNA
          Length = 2572

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2413 ctgctcctcctccctcccgt 2394
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>dbj|AK165030.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130307B08 product:immunoglobulin
           superfamily, member 4, full insert sequence
          Length = 4613

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 953 ccaagaagcgcgaaccagctcgat 930
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>gb|S81083.1|S81077S3 beta -ADD=adducin beta subunit 63 kda isoform/membrane skeleton
           protein, beta -ADD=adducin beta subunit 63 kda
           isoform/membrane skeleton protein {alternatively
           spliced, exon 10 to 13 region} [human, Genomic, 1851 nt,
           segment 3 of 3]
          Length = 1851

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 ctgctcctcctccctcccgt 144
           ||||||||||||||||||||
Sbjct: 369 ctgctcctcctccctcccgt 350
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>dbj|AK046800.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
           full-length enriched library, clone:B830010O15
           product:weakly similar to BK134P22.1 (NOVEL PROTEIN
           SIMILAR TO MOUSE IMMUNOSUPERFAMILY PROTEIN BL2)
           (NECTIN-LIKE PROTEIN 1) [Homo sapiens], full insert
           sequence
          Length = 2509

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 832 ccaagaagcgcgaaccagctcgat 809
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>gb|BC008709.1|BC008709 Homo sapiens, Similar to adducin 2 (beta), clone IMAGE:3342912,
           mRNA, partial cds
          Length = 2160

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 ctgctcctcctccctcccgt 144
           ||||||||||||||||||||
Sbjct: 636 ctgctcctcctccctcccgt 617
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>dbj|AK038842.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230067L15 product:weakly
           similar to BK134P22.1 (NOVEL PROTEIN SIMILAR TO MOUSE
           IMMUNOSUPERFAMILY PROTEIN BL2) (NECTIN-LIKE PROTEIN 1)
           [Homo sapiens], full insert sequence
          Length = 3892

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 935 ccaagaagcgcgaaccagctcgat 912
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 66      cgccgcccgccggattcgac 85
               ||||||||||||||||||||
Sbjct: 1278659 cgccgcccgccggattcgac 1278678
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>dbj|AK033973.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330131D06 product:similar to
           NECTIN-LIKE PROTEIN 1 [Mus musculus], full insert
           sequence
          Length = 2397

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 556 ccaagaagcgcgaaccagctcgat 533
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>dbj|AK043760.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830029E02 product:weakly
           similar to BK134P22.1 (NOVEL PROTEIN SIMILAR TO MOUSE
           IMMUNOSUPERFAMILY PROTEIN BL2) (NECTIN-LIKE PROTEIN 1)
           [Homo sapiens], full insert sequence
          Length = 3880

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 939 ccaagaagcgcgaaccagctcgat 916
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>gb|M69228.1|CCRFLBDBA Caulobacter crescentus putative (fliN) gene, partial cds; and flbD
            (flbD) and putative (flbF) genes, complete cds
          Length = 4424

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  gccgaggccaagcgccgcct 337
            ||||||||||||||||||||
Sbjct: 1303 gccgaggccaagcgccgcct 1322
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>gb|M32065.1|CCRFLBD Caulobacter crescentus transcription activator (flbD) gene, complete
            cds
          Length = 1614

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  gccgaggccaagcgccgcct 337
            ||||||||||||||||||||
Sbjct: 1077 gccgaggccaagcgccgcct 1096
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 118      gccggcgctgctcctcctcc 137
                ||||||||||||||||||||
Sbjct: 28139076 gccggcgctgctcctcctcc 28139057
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>gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, complete sequence
          Length = 190753

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    ctgctcctcctccctcccgt 144
              ||||||||||||||||||||
Sbjct: 160623 ctgctcctcctccctcccgt 160642
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>ref|XM_340958.2| PREDICTED: Rattus norvegicus immunoglobulin superfamily, member 4
           (predicted) (Igsf4d_predicted), mRNA
          Length = 1797

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 ccaagacgcgcgaaccagctcgat 241
           |||||| |||||||||||||||||
Sbjct: 201 ccaagaagcgcgaaccagctcgat 178
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 356     ctcgtggacgcgggccccgg 375
               ||||||||||||||||||||
Sbjct: 1514252 ctcgtggacgcgggccccgg 1514233
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>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0450A04
          Length = 162545

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    gccggcgctgctcctcctcc 137
              ||||||||||||||||||||
Sbjct: 122372 gccggcgctgctcctcctcc 122353
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>gb|AC153863.6| Mus musculus 10 BAC RP23-149M7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203121

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 408    gcctccaacccctaccatgactgc 431
              |||||||||| |||||||||||||
Sbjct: 167194 gcctccaaccactaccatgactgc 167217
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>dbj|AK073297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027J22, full
           insert sequence
          Length = 1607

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 gccggcgctgctcctcctcc 137
           ||||||||||||||||||||
Sbjct: 141 gccggcgctgctcctcctcc 160
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>gb|BC041666.1| Homo sapiens adducin 2 (beta), transcript variant beta-4, mRNA (cDNA
            clone MGC:47622 IMAGE:5491324), complete cds
          Length = 2654

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2499 ctgctcctcctccctcccgt 2480
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>emb|AM087403.1| Streptomyces venezuelae pSVH1 plasmid
          Length = 12652

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 317  cgccgaggccaagcgccgcc 336
            ||||||||||||||||||||
Sbjct: 4318 cgccgaggccaagcgccgcc 4337
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 56      cgatccccgtcgccgcccgc 75
               ||||||||||||||||||||
Sbjct: 3885164 cgatccccgtcgccgcccgc 3885183



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    tcccgcccgacgccggcgct 126
              ||||||||||||||||||||
Sbjct: 875816 tcccgcccgacgccggcgct 875797
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 356     ctcgtggacgcgggccccgg 375
               ||||||||||||||||||||
Sbjct: 1190253 ctcgtggacgcgggccccgg 1190234
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>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence
          Length = 256632

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 319    ccgaggccaagcgccgcctcctcgaagaagcccccg 354
              |||||||| ||| ||||||||||| ||| |||||||
Sbjct: 196040 ccgaggccgagccccgcctcctcggagacgcccccg 196075
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>gb|U43959.1|HSU43959 Human beta 4 adducin mRNA, alternatively spliced partial cds
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 1061 ctgctcctcctccctcccgt 1042
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>emb|X58199.1|HSBADD Human mRNA for beta adducin
          Length = 2597

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  ctgctcctcctccctcccgt 144
            ||||||||||||||||||||
Sbjct: 2290 ctgctcctcctccctcccgt 2271
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>gb|M30946.1|CCRFTRCX C.crescentus transcriptional protein (ftrC) gene, complete cds
          Length = 2202

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  gccgaggccaagcgccgcct 337
            ||||||||||||||||||||
Sbjct: 1303 gccgaggccaagcgccgcct 1322


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,508,635
Number of Sequences: 3902068
Number of extensions: 2508635
Number of successful extensions: 59051
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58338
Number of HSP's gapped (non-prelim): 713
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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