ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet94g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TLR4_BOVIN (Q9GL65) Toll-like receptor 4 precursor (CD284 antigen) 28 6.7
2CP19A_MOUSE (P28649) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromat... 24 8.5
3UBIG_AGRT5 (Q8UA66) 3-demethylubiquinone-9 3-methyltransferase (... 28 8.8
4DGA1_YEAST (Q08650) Diacylglycerol O-acyltransferase 1 (EC 2.3.1... 28 8.8

>TLR4_BOVIN (Q9GL65) Toll-like receptor 4 precursor (CD284 antigen)|
          Length = 841

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = -1

Query: 365 QEALLVNHLRQMVQDTGNKKNMAIFNWAHIDCHNIRSTINNSDCGTPQEVAVIGTTVLKF 186
           Q  LLV   + M  +  + ++M + ++ +  C  +  TI +    T   V+V+G  V KF
Sbjct: 597 QRQLLVGAEQMMCAEPLDMEDMPVLSFRNATCQ-LSKTIISVSVVTVLLVSVVGVLVYKF 655

Query: 185 EEHLLL 168
             HL+L
Sbjct: 656 YFHLML 661



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>CP19A_MOUSE (P28649) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 503

 Score = 24.3 bits (51), Expect(2) = 8.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 187 NLRTVVPMTATS*GVPQSLLLIVLLMLW 270
           N+  +VP T T   +P  L++ +LL++W
Sbjct: 12  NVTIMVPETVTVSAMPLLLIMGLLLLIW 39



 Score = 22.3 bits (46), Expect(2) = 8.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 293 IWPCSSYSPCPGP 331
           IW C S S  PGP
Sbjct: 38  IWNCESSSSIPGP 50



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>UBIG_AGRT5 (Q8UA66) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 250

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +3

Query: 12  VTACETKVIPGNLGFVAQLNEGRHLKKRPTE-FRVDNVLQPFDSSKFNFTKVGQEEVL 182
           VT C   V PG L F A +N  R LK R    F  +NVL+        + K+ + E L
Sbjct: 149 VTTCAKMVRPGGLMFAATIN--RTLKARALAIFAAENVLRWLPRGTHQYEKLVRPEEL 204



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>DGA1_YEAST (Q08650) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
          Length = 418

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 320 TGNKKNMAIFNWAHIDCHNIRSTINNSDCGTPQ 222
           TGN   + +F +  +DC+N+ ST  +S  G  Q
Sbjct: 298 TGNINLVPVFAFGEVDCYNVLSTKKDSVLGKMQ 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,161,765
Number of Sequences: 219361
Number of extensions: 1193601
Number of successful extensions: 3256
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3256
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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