Clone Information

BLAST Search Result

Clone Name	baet94f05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	150	1e-36
2	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	75	6e-14
3	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	74	2e-13
4	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	73	4e-13
5	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	72	5e-13
6	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	72	9e-13
7	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	72	9e-13
8	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	72	9e-13
9	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	71	1e-12
10	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	70	2e-12
11	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	70	3e-12
12	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	70	3e-12
13	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	70	3e-12
14	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	70	3e-12
15	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	70	3e-12
16	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	70	3e-12
17	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	70	3e-12
18	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	69	5e-12
19	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	69	5e-12
20	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	69	5e-12
21	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	69	5e-12
22	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	69	5e-12
23	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	69	5e-12
24	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	69	5e-12
25	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	69	6e-12
26	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	69	6e-12
27	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	69	6e-12
28	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	69	6e-12
29	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	69	6e-12
30	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	69	6e-12
31	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	69	6e-12
32	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	69	6e-12
33	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	69	6e-12
34	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	69	6e-12
35	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	68	1e-11
36	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	68	1e-11
37	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	68	1e-11
38	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	68	1e-11
39	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	67	2e-11
40	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	67	2e-11
41	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	67	3e-11
42	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	67	3e-11
43	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	66	4e-11
44	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	66	5e-11
45	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	65	9e-11
46	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	65	9e-11
47	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	65	1e-10
48	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	65	1e-10
49	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	65	1e-10
50	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	65	1e-10
51	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	65	1e-10
52	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	65	1e-10
53	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	65	1e-10
54	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	65	1e-10
55	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	60	3e-09
56	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	60	4e-09
57	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	58	1e-08
58	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	58	1e-08
59	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	57	2e-08
60	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	57	2e-08
61	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	56	4e-08
62	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	54	2e-07
63	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	50	2e-06
64	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	48	1e-05
65	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	48	1e-05
66	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	45	7e-05
67	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	44	2e-04
68	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	41	0.002
69	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	40	0.003
70	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	40	0.004
71	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	37	0.019
72	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	35	0.095
73	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	35	0.095
74	PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing famil...	32	0.81
75	PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing famil...	32	1.1
76	UBIE_PORGI (Q7MVR7) Menaquinone biosynthesis methyltransferase u...	30	2.3
77	ADH3_HAEIN (P44557) Putative alcohol dehydrogenase class 3 (EC 1...	30	3.1
78	NLPD_SALTI (Q56131) Lipoprotein nlpD precursor	30	3.1
79	NLPD_SALTY (P40827) Lipoprotein nlpD precursor	30	3.1
80	NLPD_SALDU (P39700) Lipoprotein nlpD precursor	30	3.1
81	INLA_LISMF (Q723K6) Internalin A precursor	29	5.2
82	SSPO_BOVIN (P98167) SCO-spondin (Fragment)	29	5.2
83	PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EI...	29	6.8
84	INLA_LISMO (P25146) Internalin A precursor	28	8.9
85	PRSA_CLOPE (Q8XHK0) Foldase protein prsA precursor (EC 5.2.1.8)	28	8.9

>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score =  150 bits (380), Expect = 1e-36
 Identities = 77/128 (60%), Positives = 92/128 (71%)
 Frame = +1

Query: 82  MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAG 261
           MA+L  ++MLGT L+F   SR  ++AP A +         F+           V+ +S  
Sbjct: 1   MASLGVSEMLGTPLNFRAVSR--SSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETS-- 56

Query: 262 IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFE 441
             DELAKWYGPDRRI+LP+GLLDRSE+PEYLNGEV GDYGYDPFGLGK+PE+FAKYQAFE
Sbjct: 57  --DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFE 114

Query: 442 LIHARWAM 465
           LIHARWAM
Sbjct: 115 LIHARWAM 122

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 44/106 (41%), Positives = 52/106 (49%)
 Frame = +1

Query: 148 ATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLL 327
           A+ A TA +  +V                  VA  SA        WYGPDR  YL     
Sbjct: 2   ASMAATASSTTVVKATPFLGQTKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPF-- 59

Query: 328 DRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
             ++ P YLNGE PGDYG+D  GL   PE FAK +A E+IH RWAM
Sbjct: 60  -SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAM 104



 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 355 NGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           N   PG   +DP GL   P  FA+ +  E+ + R AM
Sbjct: 185 NDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAM 221

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 33/62 (53%), Positives = 43/62 (69%)
 Frame = +1

Query: 280 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARW 459
           ++YGPDR  +L  G    ++ PEYL GE PGDYG+D  GL   P+ FA+Y+  ELIHARW
Sbjct: 32  EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARW 89

Query: 460 AM 465
           A+
Sbjct: 90  AL 91

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 36/61 (59%), Positives = 41/61 (67%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 49  WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 36/61 (59%), Positives = 40/61 (65%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 49  WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 34/61 (55%), Positives = 39/61 (63%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR +YL        E P YL GE PGDYG+D  GL   PE+FAK +  E+IH RWA
Sbjct: 58  WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWA 114

Query: 463 M 465
           M
Sbjct: 115 M 115

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL       ++ P YLNGE PGDYG+D  GL   PE FA+ +A E+IH RWA
Sbjct: 50  WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 106

Query: 463 M 465
           M
Sbjct: 107 M 107

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 37/71 (52%), Positives = 44/71 (61%)
 Frame = +1

Query: 253 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQ 432
           +A ID   + WYGPDR +YL        E P YL GE PGDYG+D  GL   PE FAK +
Sbjct: 55  AASID---SPWYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 108

Query: 433 AFELIHARWAM 465
             E+IH+RWAM
Sbjct: 109 ELEVIHSRWAM 119

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 37/71 (52%), Positives = 44/71 (61%)
 Frame = +1

Query: 253 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQ 432
           +A ID   + WYGPDR +YL        E P YL GE PGDYG+D  GL   PE FAK +
Sbjct: 55  AASID---SPWYGPDRVMYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 108

Query: 433 AFELIHARWAM 465
             E+IH+RWAM
Sbjct: 109 ELEVIHSRWAM 119

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 37/73 (50%), Positives = 43/73 (58%)
 Frame = +1

Query: 247 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAK 426
           T  A + D  + WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK
Sbjct: 38  TVKAPVSD--SPWYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAK 92

Query: 427 YQAFELIHARWAM 465
            +  E+IH+RWAM
Sbjct: 93  NRELEVIHSRWAM 105

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 33/61 (54%), Positives = 38/61 (62%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        ++P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 49  WYGPDRPKYLGPF---SDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 36/71 (50%), Positives = 43/71 (60%)
 Frame = +1

Query: 253 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQ 432
           SAGI+     WYGPDR  +L       +  P YL GE PGDYG+D  GL   PE F KY+
Sbjct: 34  SAGIE-----WYGPDRAKWLGPF---STNTPAYLTGEFPGDYGWDTAGLSADPETFKKYR 85

Query: 433 AFELIHARWAM 465
             E+IHARWA+
Sbjct: 86  ELEVIHARWAL 96

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 35/61 (57%), Positives = 40/61 (65%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 49  WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 50  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 106

Query: 463 M 465
           M
Sbjct: 107 M 107

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 35/61 (57%), Positives = 40/61 (65%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 45  WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 101

Query: 463 M 465
           M
Sbjct: 102 M 102

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 35/61 (57%), Positives = 39/61 (63%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR +YL  G L   E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 50  WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 106

Query: 463 M 465
           M
Sbjct: 107 M 107



 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 382 YDPFGLGKRPEDFAKYQAFELIHARWAM 465
           +DP GL +RP+ FA+ +  E+ + R AM
Sbjct: 195 FDPLGLAERPQAFAELKVKEIKNGRLAM 222

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 44/110 (40%), Positives = 52/110 (47%)
 Frame = +1

Query: 136 SSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLP 315
           +S  A ++P AG  K V L    +              S A      + WYGPDR  YL 
Sbjct: 3   ASTTALSSPFAG--KAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60

Query: 316 NGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
                  E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWAM
Sbjct: 61  PF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 107

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 34/61 (55%), Positives = 38/61 (62%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 46  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 102

Query: 463 M 465
           M
Sbjct: 103 M 103

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 34/61 (55%), Positives = 38/61 (62%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 39  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 95

Query: 463 M 465
           M
Sbjct: 96  M 96

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 34/61 (55%), Positives = 38/61 (62%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 29  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 85

Query: 463 M 465
           M
Sbjct: 86  M 86

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 34/61 (55%), Positives = 38/61 (62%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 47  WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 103

Query: 463 M 465
           M
Sbjct: 104 M 104

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        ++P YL GE PGDYG+D  GL   PE FA+ +  E+IH+RWA
Sbjct: 49  WYGPDRPKYLGPF---SEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 35/74 (47%), Positives = 45/74 (60%)
 Frame = +1

Query: 244 ATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFA 423
           A  S+G++     +YGP+R  +L  G    +  P YL GE PGDYG+D  GL   PE F 
Sbjct: 28  APKSSGVE-----FYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFK 80

Query: 424 KYQAFELIHARWAM 465
           +Y+  ELIHARWAM
Sbjct: 81  RYRELELIHARWAM 94

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 50  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 106

Query: 463 M 465
           M
Sbjct: 107 M 107

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 48  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWA 104

Query: 463 M 465
           M
Sbjct: 105 M 105

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 33/61 (54%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        + P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 48  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104

Query: 463 M 465
           M
Sbjct: 105 M 105

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 49  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 49  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 33/61 (54%), Positives = 38/61 (62%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE F+K +  E+IH+RWA
Sbjct: 52  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWA 108

Query: 463 M 465
           M
Sbjct: 109 M 109

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 33/61 (54%), Positives = 38/61 (62%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   PE F+K +  E+IH+RWA
Sbjct: 53  WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWA 109

Query: 463 M 465
           M
Sbjct: 110 M 110

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 32/61 (52%), Positives = 38/61 (62%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH+RWA
Sbjct: 47  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103

Query: 463 M 465
           M
Sbjct: 104 M 104

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR +YL  G    S  P YL+GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 49  WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 33/61 (54%), Positives = 36/61 (59%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE P DYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 33/61 (54%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGP+R  YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 51  WYGPNRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 34/61 (55%), Positives = 39/61 (63%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR +YL  G L  S  P YL GE PGDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 48  WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWA 104

Query: 463 M 465
           +
Sbjct: 105 I 105



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 307 YLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           ++  G L     P YL G       +DP GLG  PE FA+ +  E+ + R AM
Sbjct: 174 HVAGGRLGEVVDPLYLGGS------FDPLGLGDDPERFAELKVKEIKNGRLAM 220

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 33/61 (54%), Positives = 36/61 (59%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D   L   PE FAK +  E+IH RWA
Sbjct: 51  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWA 107

Query: 463 M 465
           M
Sbjct: 108 M 108

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 36/73 (49%), Positives = 42/73 (57%)
 Frame = +1

Query: 247 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAK 426
           + SAG D     WYG DR  +L        E P YLNGE  GDYG+D  GL   PE FA+
Sbjct: 43  SKSAGSD---TIWYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFAR 96

Query: 427 YQAFELIHARWAM 465
            +  E+IHARWAM
Sbjct: 97  NRELEVIHARWAM 109

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 32/61 (52%), Positives = 35/61 (57%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE PGDYG+D  GL   P  FAK +  E+IH RW 
Sbjct: 50  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWT 106

Query: 463 M 465
           M
Sbjct: 107 M 107

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 32/61 (52%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR  YL        E P YL GE PGDYG+D  GL   PE FA+ +  E+IH+RWA
Sbjct: 50  WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106

Query: 463 M 465
           M
Sbjct: 107 M 107

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 32/61 (52%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR  YL        E P YL GE PGDYG+D  GL   PE FA+ +  E+IH+RWA
Sbjct: 50  WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106

Query: 463 M 465
           M
Sbjct: 107 M 107

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 31/61 (50%), Positives = 36/61 (59%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 31/61 (50%), Positives = 36/61 (59%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 31/61 (50%), Positives = 36/61 (59%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 49  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 32/61 (52%), Positives = 36/61 (59%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR  YL        E P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 49  WYGSDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 463 M 465
           M
Sbjct: 106 M 106

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 32/61 (52%), Positives = 36/61 (59%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL  G       P YL GE PGDYG+D   +   PE FAK +  E+IH RWA
Sbjct: 50  WYGPDRPKYL--GPFSEG-TPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWA 106

Query: 463 M 465
           M
Sbjct: 107 M 107

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 32/61 (52%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           W+GPD   YL        E P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 12  WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 68

Query: 463 M 465
           M
Sbjct: 69  M 69

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 31/61 (50%), Positives = 37/61 (60%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR  +L        + P YL GE PGDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 48  WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 104

Query: 463 M 465
           M
Sbjct: 105 M 105

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 31/61 (50%), Positives = 36/61 (59%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYG DR  YL        + P YL GE PGDYG+D  GL   PE FA+ +  E+IH RWA
Sbjct: 21  WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 77

Query: 463 M 465
           M
Sbjct: 78  M 78

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = +1

Query: 292 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           PDR ++ P      S  PE+L+G +PGD+G+DP GLG  PE        EL+H+RWAM
Sbjct: 63  PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAM 115

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = +1

Query: 343 PEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           PE+L+G +PGDYG+DP GLGK P     Y+  ELIH RWAM
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM 108

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +1

Query: 343 PEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           PE+L+G +PGD+G+DP GLGK P     Y+  ELIH RWAM
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAM 108

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +1

Query: 343 PEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           PE+L+G +PGD+G+DP GLGK P     Y+  ELIH RWAM
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAM 113

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +1

Query: 337 EVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           E P YL GE PGDYG+D  GL   PE FAK +  E+IH+ WAM
Sbjct: 5   EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAM 47

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = +1

Query: 292 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           PDR ++ P      S  P +L+G +PGD+G+DP GL   PE     Q  EL+H RWAM
Sbjct: 63  PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAM 115

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 343 PEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           P YL+G  PGD+G+D  GLG+ P +  +Y+  ELIH RWAM
Sbjct: 56  PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAM 96

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +1

Query: 337 EVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           E P YL GE PGDYG+D  GL   PE FAK +  E+IH+R AM
Sbjct: 68  EWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAM 110

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 26/59 (44%), Positives = 34/59 (57%)
 Frame = +1

Query: 280 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHAR 456
           ++YGPD      +G   + + P    GE PGDYG+D  GL   PE F +Y+  ELIHAR
Sbjct: 56  QFYGPDAT----SGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHAR 110

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 29/89 (32%), Positives = 41/89 (46%)
 Frame = +1

Query: 199 RFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDY 378
           R N             TSS  ++ +  +W        LP GL      P+YL G + GD 
Sbjct: 29  RLNRDLSFTSIGSSAKTSSFKVEAKKGEW--------LP-GLAS----PDYLTGSLAGDN 75

Query: 379 GYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           G+DP GL + PE+   +   EL++ RWAM
Sbjct: 76  GFDPLGLAEDPENLKWFVQAELVNGRWAM 104

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 28/61 (45%), Positives = 31/61 (50%)
 Frame = +1

Query: 283 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           WYGPDR  YL        E P YL GE          GL   PE FAK +  E+IH+RWA
Sbjct: 48  WYGPDRVKYLGPF---SGEAPSYLTGEF--------HGLSADPETFAKNRELEVIHSRWA 96

Query: 463 M 465
           M
Sbjct: 97  M 97

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 25/56 (44%), Positives = 34/56 (60%)
 Frame = +1

Query: 277 AKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFEL 444
           AK    DR ++ P      ++ PEYL+G + GDYG+DPFGLGK     A+Y  F+L
Sbjct: 45  AKTVISDRPLWFPG-----AKSPEYLDGSLVGDYGFDPFGLGKP----AEYLQFDL 91



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 367 PGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           PG   +DP GL   P   A+ Q  E+ HAR AM
Sbjct: 215 PGGKFFDPLGLASDPVKKAQLQLAEIKHARLAM 247

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = +1

Query: 304 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           ++ PN L      P +LNGE  GD G+DP GL   P+ F + +  E+ H R AM
Sbjct: 4   LWFPNTL-----APSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAM 52



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +1

Query: 295 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           +R ++ PN +      P YL GE  GD G+DP GL   P  F + Q  E+ H R +M
Sbjct: 370 ERELWFPNIV-----PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSM 421



 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +1

Query: 304 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           ++ PN     +E P  L GE P D G+DP  L   P+ +A+ +  E+ H R AM
Sbjct: 189 LWFPN-----AEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAM 237

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +1

Query: 295 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPE 414
           DR ++ P  +      P++L+G + GDYG+DPFGLGK  E
Sbjct: 54  DRPLWYPGAIS-----PDWLDGSLVGDYGFDPFGLGKPAE 88



 Score = 32.7 bits (73), Expect = 0.47
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 367 PGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           PG   +DP GL   PE  A+ Q  E+ HAR AM
Sbjct: 218 PGGKFFDPLGLAADPEKTAQLQLAEIKHARLAM 250

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +1

Query: 295 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKY 429
           DR ++ P      +  PE+L+G + GD G+DPFGLGK P ++ +Y
Sbjct: 55  DRLVWFPG-----ANPPEWLDGSMIGDRGFDPFGLGK-PAEYLQY 93

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +1

Query: 334 SEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIHARWAM 465
           ++ P +L GE P D G+DP  +   P  +A+ +  E+ HAR +M
Sbjct: 166 AQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSM 209

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +1

Query: 304 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDF 420
           ++LPN     +  PE+L+G +PGD G+DP GL K P +F
Sbjct: 51  LWLPN-----TTRPEWLDGSLPGDRGFDPLGLSK-PSEF 83

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 35.0 bits (79), Expect = 0.095
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
 Frame = +1

Query: 349 YLNGEVPGDYGYDPFGLGKRPEDFA-----KYQAF-ELIHARWAM 465
           YL+G +PGD+G+DP GL   PE        K+ A+ E+I+ R+AM
Sbjct: 65  YLDGRLPGDFGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRFAM 108

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 35.0 bits (79), Expect = 0.095
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 358 GEVPGDYGYDPFGLG-KRPEDFAKYQAFELIHARWAM 465
           G  PGD G+DP GL    P++F   Q  EL H R AM
Sbjct: 146 GYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAM 182

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>PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing family A member 6|
           (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3)
          Length = 1048

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
 Frame = +1

Query: 268 DELAKWYGPDRRIYLPNGLLDRSE-------VPEYL---NGEVPGDYGYDPFGLGKRPED 417
           ++L +W    R +  P  L   S        VPEY    + + P DY Y P G+  RPE 
Sbjct: 316 NQLQQWVNLRRGVPPPEDLRSPSRFYPVSRRVPEYYGPYSSQYPDDYQYYPPGV--RPES 373

Query: 418 FAKYQAFELIHARWAM 465
                A++ I   WA+
Sbjct: 374 ICSMPAYDRISPPWAL 389

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>PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing family A member 6|
           (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3)
          Length = 1173

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
 Frame = +1

Query: 268 DELAKWYGPDRRIYLPNGLLDRSE-------VPEYLN---GEVPGDYGYDPFGLGKRPED 417
           ++L +W    R +  P  L   S        VP+Y N    + P DY Y P G+  RP+ 
Sbjct: 316 NQLQQWVNLRRGVPPPEDLRSPSRFYPMPRRVPDYYNPYSSQYPDDYQYYPPGV--RPDS 373

Query: 418 FAKYQAFELIHARWAM 465
                A++ I   WA+
Sbjct: 374 ICSMPAYDRISPPWAL 389

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>UBIE_PORGI (Q7MVR7) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 245

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -2

Query: 453 GMDELKGLVLGEVLWPLA-QTKRIVAVVSGNLAVEVLRHLRPVKEAVGQVDPPVRAVPLG 277
           GMD +       ++ P A  T   VA  +G+LA+E+ RH+  VK+  G VD  +  + +G
Sbjct: 41  GMDRVWRQKAIRMIEPFAPHTVLDVATGTGDLAIEICRHIPSVKQVTG-VDLSLEMMRIG 99

Query: 276 E 274
           E
Sbjct: 100 E 100

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>ADH3_HAEIN (P44557) Putative alcohol dehydrogenase class 3 (EC 1.1.1.1)|
           (Alcohol dehydrogenase class III)
           (S-(hydroxymethyl)glutathione dehydrogenase) (EC
           1.1.1.284) (Glutathione-dependent formaldehyde
           dehydrogenase) (FDH) (FALDH)
          Length = 378

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 319 GLLDRSEVPEYLNGEVPGDYGYDPFGLGKRPEDFAKYQAFELIH 450
           G+  RSE+P+ +   + GD   +PF     P D    +AFEL+H
Sbjct: 325 GVKGRSELPQMVEDSMKGDIQLEPFVTHTMPLDKIN-EAFELMH 367

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>NLPD_SALTI (Q56131) Lipoprotein nlpD precursor|
          Length = 373

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 272 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 361
           N P+GT +T   T PT S T     STST+
Sbjct: 219 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 248

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>NLPD_SALTY (P40827) Lipoprotein nlpD precursor|
          Length = 377

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 272 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 361
           N P+GT +T   T PT S T     STST+
Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252

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>NLPD_SALDU (P39700) Lipoprotein nlpD precursor|
          Length = 377

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 272 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 361
           N P+GT +T   T PT S T     STST+
Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252

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>INLA_LISMF (Q723K6) Internalin A precursor|
          Length = 800

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 272 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 388
           N+P  T   G +T P+A++ G    +TST     TT+T+
Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSNTSNTSTGNSASTTSTM 754

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>SSPO_BOVIN (P98167) SCO-spondin (Fragment)|
          Length = 867

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 367 PGDYGYDPFGLGKRPEDFAKYQAFELIHARWA 462
           PGD  Y P GL + PE      + +L H  WA
Sbjct: 340 PGDPCYSPLGLARLPEGSLPASSQQLEHPAWA 371

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>PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EIICBA component|
           [Includes: Glucosamine permease IIC component (PTS
           system glucosamine-specific EIIC component);
           Glucosamine-specific phosphotransferase enzyme IIB
           component (EC 2.7.1.69) (PTS
          Length = 631

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 182 IFCAPAVGAAVAYLEEPAKSSRVPSILVGAS 90
           IFC PAV  A+ +   P K   +  +++ A+
Sbjct: 252 IFCLPAVALAIIHTARPEKKKMISGVMISAA 282

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>INLA_LISMO (P25146) Internalin A precursor|
          Length = 800

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 272 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 388
           N+P  T   G +T P+A++ G    +TST     TT+T+
Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTM 754

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>PRSA_CLOPE (Q8XHK0) Foldase protein prsA precursor (EC 5.2.1.8)|
          Length = 342

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -2

Query: 408 PLAQTKRIVAVVSGNLAVEVLRHLRPVKEAVGQVDPPVRAVPLGEFVVDAGA 253
           P+A+   +V   +  L  E +  L+P+KE  G++  P++    G  ++ AGA
Sbjct: 236 PIAENLGVVPAENSGLVQEFVDGLKPLKE--GEISKPIK-TQFGYHIIQAGA 284


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,681,391
Number of Sequences: 219361
Number of extensions: 925944
Number of successful extensions: 3210
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 3057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3167
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result