Clone Name	baet94f05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for ...	575	e-161
2	dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clon...	361	1e-96
3	dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clon...	361	1e-96
4	dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clon...	353	3e-94
5	gb|AY105650.1| Zea mays PCO135935 mRNA sequence	214	2e-52
6	gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein...	214	2e-52
7	gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein...	214	2e-52
8	gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome...	170	3e-39
9	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	170	3e-39
10	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	170	3e-39
11	gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence	105	1e-19
12	emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP...	68	3e-08
13	emb|X95727.1|BJMCAB1GE B.juncea mRNA for chlorophyll a/b-binding...	58	3e-05
14	ref|XM_368803.1| Magnaporthe grisea 70-15 chromosome VI hypothet...	46	0.10
15	gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl...	44	0.40
16	emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase...	44	0.40
17	ref|NM_117102.3| Arabidopsis thaliana LHCB5 (LIGHT HARVESTING CO...	42	1.6
18	gb|AF339718.1| Arabidopsis thaliana putative chlorophyll a/b-bin...	42	1.6
19	gb|AF326900.1| Arabidopsis thaliana putative chlorophyll a/b-bin...	42	1.6
20	gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome	42	1.6
21	gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, c...	42	1.6
22	gb|AF439282.1|AF439282 Retama raetam chl a/b-binding protein mRN...	42	1.6
23	gb|AF424597.1|AF424597 Arabidopsis thaliana AT4g10340/F24G24_140...	42	1.6
24	gb|AY054126.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, c...	42	1.6
25	gb|AF380631.1|AF380631 Arabidopsis thaliana AT4g10340/F24G24_140...	42	1.6
26	emb|BX829238.1|CNS0A4DW Arabidopsis thaliana Full-length cDNA Co...	42	1.6
27	emb|BX826540.1|CNS0A4GD Arabidopsis thaliana Full-length cDNA Co...	42	1.6
28	emb|BX826592.1|CNS0A355 Arabidopsis thaliana Full-length cDNA Co...	42	1.6
29	gb|AY087939.1| Arabidopsis thaliana clone 39765 mRNA, complete s...	42	1.6
30	gb|AF134129.1| Arabidopsis thaliana Lhcb5 protein (Lhcb5) mRNA, ...	42	1.6
31	gb|AY111693.1| Zea mays CL6746_1 mRNA sequence	42	1.6
32	gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete...	40	6.3
33	gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcom...	40	6.3
34	ref|XM_527798.1| PREDICTED: Pan troglodytes similar to hypotheti...	40	6.3
35	emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ...	40	6.3
36	emb|CR931997.1| Corynebacterium jeikeium K411 complete genome	40	6.3
37	gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete...	40	6.3
38	gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, compl...	40	6.3
39	gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ...	40	6.3
40	emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chrom...	40	6.3
41	emb|AL096774.9|HSDJ144C9 Human DNA sequence from clone RP1-144C9...	40	6.3
42	gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome	40	6.3
43	emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chr...	40	6.3
44	gb|AE011785.1| Xanthomonas axonopodis pv. citri str. 306, secti...	40	6.3
45	gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, comp...	40	6.3
46	gb|AF159555.1| Eastern equine encephalomyelitis virus isolate TX...	40	6.3
47	gb|AC154749.2| Mus musculus BAC clone RP24-399C21 from 17, compl...	40	6.3
48	dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp...	40	6.3

---

>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b
           binding (CAB) protein of photosystem II (PSII)
          Length = 2689

 Score =  575 bits (290), Expect = e-161
 Identities = 290/290 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcacatcctcccttcctgctgagctgagcacgcccctctgctgcacgccccttctccct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atcacatcctcccttcctgctgagctgagcacgcccctctgctgcacgccccttctccct 754

                                                                       
Query: 61  cccaaccttgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 cccaaccttgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccgg 814

                                                                       
Query: 121 ctcgacttcgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ctcgacttcgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaag 874

                                                                       
Query: 181 atcgtctccctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 atcgtctccctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgccc 934

                                                             
Query: 241 gtggccacctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gtggccacctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 984



 Score =  170 bits (86), Expect = 3e-39
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                        
Query: 289  ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 1146

                                      
Query: 349  tacctcaacggcgaggttcccggaga 374
            ||||||||||||||||||||||||||
Sbjct: 1147 tacctcaacggcgaggttcccggaga 1172



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                  
Query: 375  ctacggctacgatccttttggtctgggcaagaggccagaggacttcgccaagta 428
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1382 ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 1435



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                     
Query: 426  gtaccaggcctttgagctcatccatgccaggtgggccatgc 466
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1550 gtaccaggcctttgagctcatccatgccaggtgggccatgc 1590

---

>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full
           insert sequence
          Length = 1101

 Score =  361 bits (182), Expect = 1e-96
 Identities = 343/398 (86%), Gaps = 9/398 (2%)
 Strand = Plus / Plus

                                                                       
Query: 69  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 128
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 68  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 127

                                                                       
Query: 129 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 188
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 128 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 187

                                                                       
Query: 189 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 248
           |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 188 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 238

                                                                       
Query: 249 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 308
           ||||||| ||| ||||| ||| || |||||||||||||||||||||||||||||||||| 
Sbjct: 239 ctcgagccccgacatcggcgatgagctcgccaagtggtacggccctgacaggaggatctt 298

                                                                       
Query: 309 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 368
           ||||||  | || ||||| ||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 299 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 358

                                                                       
Query: 369 cggagactacggctacgatccttttggtctgggcaagaggccagaggacttcgccaagta 428
           |||||||||||||||||| |||||||| ||  |||||| ||||||||||||| |||||||
Sbjct: 359 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 418

                                                 
Query: 429 ccaggcctttgagctcatccatgccaggtgggccatgc 466
           |||||||| |||||| ||||||||||||||||| ||||
Sbjct: 419 ccaggcctatgagctgatccatgccaggtgggcgatgc 456

---

>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full
           insert sequence
          Length = 1186

 Score =  361 bits (182), Expect = 1e-96
 Identities = 343/398 (86%), Gaps = 9/398 (2%)
 Strand = Plus / Plus

                                                                       
Query: 69  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 128
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 79  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 138

                                                                       
Query: 129 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 188
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 139 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 198

                                                                       
Query: 189 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 248
           |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 199 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 249

                                                                       
Query: 249 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 308
           ||||||| ||| ||||| ||| || |||||||||||||||||||||||||||||||||| 
Sbjct: 250 ctcgagccccgacatcggcgatgagctcgccaagtggtacggccctgacaggaggatctt 309

                                                                       
Query: 309 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 368
           ||||||  | || ||||| ||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 310 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 369

                                                                       
Query: 369 cggagactacggctacgatccttttggtctgggcaagaggccagaggacttcgccaagta 428
           |||||||||||||||||| |||||||| ||  |||||| ||||||||||||| |||||||
Sbjct: 370 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 429

                                                 
Query: 429 ccaggcctttgagctcatccatgccaggtgggccatgc 466
           |||||||| |||||| ||||||||||||||||| ||||
Sbjct: 430 ccaggcctatgagctgatccatgccaggtgggcgatgc 467

---

>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full
           insert sequence
          Length = 1157

 Score =  353 bits (178), Expect = 3e-94
 Identities = 342/398 (85%), Gaps = 9/398 (2%)
 Strand = Plus / Plus

                                                                       
Query: 69  tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 128
           ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 78  tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 137

                                                                       
Query: 129 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 188
           ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 138 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 197

                                                                       
Query: 189 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 248
           |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 198 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 248

                                                                       
Query: 249 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 308
           ||||||| ||| ||||| ||| || |||||| ||||||||||||||||||||||||||| 
Sbjct: 249 ctcgagccccgacatcggcgatgagctcgccgagtggtacggccctgacaggaggatctt 308

                                                                       
Query: 309 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 368
           ||||||  | || ||||| ||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 309 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 368

                                                                       
Query: 369 cggagactacggctacgatccttttggtctgggcaagaggccagaggacttcgccaagta 428
           |||||||||||||||||| |||||||| ||  |||||| ||||||||||||| |||||||
Sbjct: 369 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 428

                                                 
Query: 429 ccaggcctttgagctcatccatgccaggtgggccatgc 466
           |||||||| |||||| ||||||||||||||||| ||||
Sbjct: 429 ccaggcctatgagctgatccatgccaggtgggcgatgc 466

---

>gb|AY105650.1| Zea mays PCO135935 mRNA sequence
          Length = 1366

 Score =  214 bits (108), Expect = 2e-52
 Identities = 177/200 (88%)
 Strand = Plus / Plus

                                                                       
Query: 267 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 326
           |||||| |||||||||||||| || |||||||||||||||||| ||||  | || ||  |
Sbjct: 352 cgacgagctcgccaagtggtatggtcctgacaggaggatctacctgccggatgggctgtt 411

                                                                       
Query: 327 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 386
            |||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||
Sbjct: 412 ggaccggtcggaggtgccggagtacctcaccggagaggtccctggagactatggctacga 471

                                                                       
Query: 387 tccttttggtctgggcaagaggccagaggacttcgccaagtaccaggcctttgagctcat 446
            |||||||| |||||||||| |||||||||||||||||||||||||||||  ||||| ||
Sbjct: 472 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 531

                               
Query: 447 ccatgccaggtgggccatgc 466
           ||||||||| ||||||||||
Sbjct: 532 ccatgccagatgggccatgc 551



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 80  caatggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcct 139
           |||||||||||||||||||  ||||||| || ||||||| |||| ||||||| |||||||
Sbjct: 174 caatggcggcgctcgctccatccaagattctgggcacccagctcaacttcgcgggctcct 233

                                                               
Query: 140 ccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccct 191
           || | || ||||| || ||||| || || || || |||||||| ||||||||
Sbjct: 234 cccgctacgccaccgcagcgcccaccgcgggggctcagaagattgtctccct 285

---

>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA,
           complete cds
          Length = 1073

 Score =  214 bits (108), Expect = 2e-52
 Identities = 177/200 (88%)
 Strand = Plus / Plus

                                                                       
Query: 267 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 326
           |||||| ||||||||||||||||| |||||||||||||||||| ||||  | || ||  |
Sbjct: 208 cgacgagctcgccaagtggtacggtcctgacaggaggatctacctgccggatgggctgtt 267

                                                                       
Query: 327 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 386
            |||||||||||||| ||||||||||||| ||| ||||| || |||||||| ||||||||
Sbjct: 268 ggaccggtcggaggtaccggagtacctcaccggagaggtccctggagactatggctacga 327

                                                                       
Query: 387 tccttttggtctgggcaagaggccagaggacttcgccaagtaccaggcctttgagctcat 446
            |||||||| |||||||||| |||||||||||||||||||||||||||||  ||||| ||
Sbjct: 328 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 387

                               
Query: 447 ccatgccaggtgggccatgc 466
           ||||||||| ||||||||||
Sbjct: 388 ccatgccagatgggccatgc 407



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 80  caatggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcct 139
           |||||||||||||||||||  ||||||| || ||||||| |||| |||||||||||||||
Sbjct: 30  caatggcggcgctcgctccatccaagattctgggcacccagctcaacttcgccggctcct 89

                                                               
Query: 140 ccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccct 191
           || | || ||||| || ||||| || || || || |||||||| ||||||||
Sbjct: 90  cccgctacgccaccgcagcgcccaccgcgggggctcagaagattgtctccct 141

---

>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA,
           complete cds
          Length = 957

 Score =  214 bits (108), Expect = 2e-52
 Identities = 177/200 (88%)
 Strand = Plus / Plus

                                                                       
Query: 267 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 326
           |||||| ||||||||||||||||| |||||||||||||||||| ||||  | || ||| |
Sbjct: 210 cgacgagctcgccaagtggtacggtcctgacaggaggatctacctgccggatgggctctt 269

                                                                       
Query: 327 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 386
            ||||| |||||||| ||||||||||||| ||| ||||| || |||||||| ||||||||
Sbjct: 270 ggaccgctcggaggtaccggagtacctcaccggagaggtccctggagactatggctacga 329

                                                                       
Query: 387 tccttttggtctgggcaagaggccagaggacttcgccaagtaccaggcctttgagctcat 446
            |||||||| |||||||||| |||||||||||||||||||||||||||||  ||||| ||
Sbjct: 330 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 389

                               
Query: 447 ccatgccaggtgggccatgc 466
           ||||||||| ||||||||||
Sbjct: 390 ccatgccagatgggccatgc 409



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  atggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcctcc 141
           |||||||| || |||||  ||||||| || ||||||  |||| |||||||||||||||||
Sbjct: 34  atggcggctcttgctccatccaagattctgggcaccaagctcaacttcgccggctcctcc 93

                                                                 
Query: 142 aggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccctcttc 195
            | || ||||| || ||||| || || || || |||||||||||||||||||||
Sbjct: 94  cgctacgccaccgcagcgcccaccgcgggggctcagaagatcgtctccctcttc 147

---

>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0091I11, complete sequence
          Length = 135993

 Score =  170 bits (86), Expect = 3e-39
 Identities = 187/222 (84%), Gaps = 9/222 (4%)
 Strand = Plus / Plus

                                                                         
Query: 69    tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 128
             ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 38104 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 38163

                                                                         
Query: 129   cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 188
             ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 38164 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 38223

                                                                         
Query: 189   cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 248
             |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 38224 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 38274

                                                       
Query: 249   ctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 290
             ||||||| ||| ||||| ||| || |||||||||||||||||
Sbjct: 38275 ctcgagccccgacatcggcgatgagctcgccaagtggtacgg 38316



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                         
Query: 289   ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 348
             ||||||||||||||||||| ||||||  | || ||||| ||||| || ||||||||||| 
Sbjct: 38427 ggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggac 38486

                                       
Query: 349   tacctcaacggcgaggttcccggaga 374
             ||||||||||| ||||| ||||||||
Sbjct: 38487 tacctcaacggagaggtccccggaga 38512



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 375   ctacggctacgatccttttggtctgggcaagaggccagaggacttcgccaagta 428
             |||||||||||| |||||||| ||  |||||| ||||||||||||| |||||||
Sbjct: 39057 ctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 39110



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 426   gtaccaggcctttgagctcatccatgccaggtgggccatgc 466
             ||||||||||| |||||| ||||||||||||||||| ||||
Sbjct: 39208 gtaccaggcctatgagctgatccatgccaggtgggcgatgc 39248

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  170 bits (86), Expect = 3e-39
 Identities = 187/222 (84%), Gaps = 9/222 (4%)
 Strand = Plus / Plus

                                                                           
Query: 69      tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 128
               ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 7579018 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 7579077

                                                                           
Query: 129     cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 188
               ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 7579078 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 7579137

                                                                           
Query: 189     cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 248
               |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 7579138 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 7579188

                                                         
Query: 249     ctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 290
               ||||||| ||| ||||| ||| || |||||||||||||||||
Sbjct: 7579189 ctcgagccccgacatcggcgatgagctcgccaagtggtacgg 7579230



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                           
Query: 289     ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 348
               ||||||||||||||||||| ||||||  | || ||||| ||||| || ||||||||||| 
Sbjct: 7579341 ggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggac 7579400

                                         
Query: 349     tacctcaacggcgaggttcccggaga 374
               ||||||||||| ||||| ||||||||
Sbjct: 7579401 tacctcaacggagaggtccccggaga 7579426



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                     
Query: 375     ctacggctacgatccttttggtctgggcaagaggccagaggacttcgccaagta 428
               |||||||||||| |||||||| ||  |||||| ||||||||||||| |||||||
Sbjct: 7579971 ctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 7580024



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                        
Query: 426     gtaccaggcctttgagctcatccatgccaggtgggccatgc 466
               ||||||||||| |||||| ||||||||||||||||| ||||
Sbjct: 7580122 gtaccaggcctatgagctgatccatgccaggtgggcgatgc 7580162

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  170 bits (86), Expect = 3e-39
 Identities = 187/222 (84%), Gaps = 9/222 (4%)
 Strand = Plus / Plus

                                                                           
Query: 69      tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 128
               ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 7649105 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 7649164

                                                                           
Query: 129     cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 188
               ||||||||||||| | || ||||| ||||| |||||  |||| |||||||||||||||||
Sbjct: 7649165 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 7649224

                                                                           
Query: 189     cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 248
               |||||         ||| ||||||||| ||||||||||| ||||||||  ||||  || |
Sbjct: 7649225 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 7649275

                                                         
Query: 249     ctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 290
               ||||||| ||| ||||| ||| || |||||||||||||||||
Sbjct: 7649276 ctcgagccccgacatcggcgatgagctcgccaagtggtacgg 7649317



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                           
Query: 289     ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 348
               ||||||||||||||||||| ||||||  | || ||||| ||||| || ||||||||||| 
Sbjct: 7649428 ggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggac 7649487

                                         
Query: 349     tacctcaacggcgaggttcccggaga 374
               ||||||||||| ||||| ||||||||
Sbjct: 7649488 tacctcaacggagaggtccccggaga 7649513



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                     
Query: 375     ctacggctacgatccttttggtctgggcaagaggccagaggacttcgccaagta 428
               |||||||||||| |||||||| ||  |||||| ||||||||||||| |||||||
Sbjct: 7650058 ctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 7650111



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                        
Query: 426     gtaccaggcctttgagctcatccatgccaggtgggccatgc 466
               ||||||||||| |||||| ||||||||||||||||| ||||
Sbjct: 7650209 gtaccaggcctatgagctgatccatgccaggtgggcgatgc 7650249

---

>gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence
          Length = 1196

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Plus

                                                                       
Query: 346 gagtacctcaacggcgaggttcccggagactacggctacgatccttttggtctgggcaag 405
           |||||| | ||||| || ||||||||||||||||| ||||||||||||||| || |||||
Sbjct: 344 gagtacttgaacggagaagttcccggagactacggttacgatccttttggtttgagcaag 403

                                                                       
Query: 406 aggccagaggacttcgccaagtaccaggcctttgagctcatccatgccaggtgggccatg 465
           | |||||| ||||||||||| || ||||| | |||||| ||||| ||||| ||||| |||
Sbjct: 404 aagccagaagacttcgccaaatatcaggcatatgagctgatccacgccagatgggctatg 463

            
Query: 466 c 466
           |
Sbjct: 464 c 464



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 265 gacgacgaactcgccaagtggtacggccctgacag 299
           ||||| || ||||||||||||||||| ||||||||
Sbjct: 263 gacgatgagctcgccaagtggtacggacctgacag 297

---

>emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP29 polypeptide
          Length = 2327

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 375  ctacggctacgatccttttggtctgggcaagaggccagaggacttcgccaagta 428
            |||||| ||||||||||||||| || |||||| |||||| ||||||||||||||
Sbjct: 1018 ctacggttacgatccttttggtttgagcaagaagccagaagacttcgccaagta 1071

---

>emb|X95727.1|BJMCAB1GE B.juncea mRNA for chlorophyll a/b-binding protein
          Length = 1033

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 266 acgacgaactcgccaagtggtacggccctgacaggaggatctacttgcc 314
           ||||||| |||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 185 acgacgagctcgccaagtggtatggtcctgacaggagaatcttcttgcc 233

---

>ref|XM_368803.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00441.4) partial mRNA
          Length = 612

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 239 ccgtggccacctcgagcgccggc 261
           |||||||||||||||||||||||
Sbjct: 331 ccgtggccacctcgagcgccggc 309

---

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 219     cccgaagccgaagcccgcgccc 240
               ||||||||||||||||||||||
Sbjct: 2412357 cccgaagccgaagcccgcgccc 2412336

---

>emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase operon
          Length = 11280

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 220  ccgaagccgaagcccgcgcccg 241
            ||||||||||||||||||||||
Sbjct: 4368 ccgaagccgaagcccgcgcccg 4347

---

>ref|NM_117102.3| Arabidopsis thaliana LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM
           II 5); chlorophyll binding AT4G10340 (LHCB5) mRNA,
           complete cds
          Length = 1208

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 359 ctcgccaagtggtatggtcctgacaggag 387

---

>gb|AF339718.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein
           (At4g10340) mRNA, complete cds
          Length = 893

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 175 ctcgccaagtggtatggtcctgacaggag 203

---

>gb|AF326900.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein
           (At4g10340) mRNA, complete cds
          Length = 998

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255

---

>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   gaagccgaagcccgcgcccgt 242
             |||||||||||||||||||||
Sbjct: 29859 gaagccgaagcccgcgcccgt 29839

---

>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 1950

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 478 ctcgccaagtggtatggtcctgacaggag 450

---

>gb|AF439282.1|AF439282 Retama raetam chl a/b-binding protein mRNA, partial cds
          Length = 318

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 277 gccaagtggtacggccctgacaggaggat 305
           ||||||||||| || ||||||||||||||
Sbjct: 246 gccaagtggtatggtcctgacaggaggat 274

---

>gb|AF424597.1|AF424597 Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 1027

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255

---

>gb|AY054126.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 843

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 175 ctcgccaagtggtatggtcctgacaggag 203

---

>gb|AF380631.1|AF380631 Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 982

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255

---

>emb|BX829238.1|CNS0A4DW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL83ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 996

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 208 ctcgccaagtggtatggtcctgacaggag 236

---

>emb|BX826540.1|CNS0A4GD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB37ZC03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 989

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 207 ctcgccaagtggtatggtcctgacaggag 235

---

>emb|BX826592.1|CNS0A355 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB45ZA02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 972

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 214 ctcgccaagtggtatggtcctgacaggag 242

---

>gb|AY087939.1| Arabidopsis thaliana clone 39765 mRNA, complete sequence
          Length = 1036

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 269 ctcgccaagtggtatggtcctgacaggag 297

---

>gb|AF134129.1| Arabidopsis thaliana Lhcb5 protein (Lhcb5) mRNA, complete cds
          Length = 1029

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 ctcgccaagtggtacggccctgacaggag 302
           |||||||||||||| || |||||||||||
Sbjct: 222 ctcgccaagtggtatggtcctgacaggag 250

---

>gb|AY111693.1| Zea mays CL6746_1 mRNA sequence
          Length = 1026

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 213 gcctgccccgaagccgaagcc 233
           |||||||||||||||||||||
Sbjct: 465 gcctgccccgaagccgaagcc 485

---

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cggctcctccaggtatgcca 151
              ||||||||||||||||||||
Sbjct: 333603 cggctcctccaggtatgcca 333622

---

>gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcomycin biosynthetic gene
             cluster, partial sequence
          Length = 85915

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   gaagccgaagcccgcgcccg 241
             ||||||||||||||||||||
Sbjct: 68883 gaagccgaagcccgcgcccg 68902

---

>ref|XM_527798.1| PREDICTED: Pan troglodytes similar to hypothetical protein
           (LOC472424), mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 19  gctgagctgagcacgcccctctgc 42
           ||||||||||||||| ||||||||
Sbjct: 450 gctgagctgagcacgaccctctgc 427

---

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 233     ccgcgcccgtggccacctcg 252
               ||||||||||||||||||||
Sbjct: 1783493 ccgcgcccgtggccacctcg 1783474

---

>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     agaagcctgccccgaagccg 228
               ||||||||||||||||||||
Sbjct: 1342884 agaagcctgccccgaagccg 1342865

---

>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence
          Length = 150332

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    gctgagctgagcacgcccctctgc 42
             ||||||||||||||| ||||||||
Sbjct: 62037 gctgagctgagcacgaccctctgc 62060

---

>gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, complete sequence
          Length = 178050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    gctgagctgagcacgcccctctgc 42
             ||||||||||||||| ||||||||
Sbjct: 33553 gctgagctgagcacgaccctctgc 33576

---

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     ccgaagccgaagcccgcgcc 239
               ||||||||||||||||||||
Sbjct: 2226819 ccgaagccgaagcccgcgcc 2226800

---

>emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chromosome 6 Contains the 3'
             end of the gene for phenylalanine-tRNA synthetase (FARS1),
             complete sequence
          Length = 57423

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   acaagaagcctgccccgaag 225
             ||||||||||||||||||||
Sbjct: 38602 acaagaagcctgccccgaag 38583

---

>emb|AL096774.9|HSDJ144C9 Human DNA sequence from clone RP1-144C9 on chromosome 1p34.3-36.11
             Contains the gene for a novel protein, a ribosomal protein
             S24 (RPS24) pseudogene, the GPR3 gene for G
             protein-coupled receptor 3 and the 3' end of the WASF2
             gene for WAS protein family, member 2, complete sequence
          Length = 77322

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    ctgctgcacgccccttctcc 58
             ||||||||||||||||||||
Sbjct: 27561 ctgctgcacgccccttctcc 27542

---

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    catcgacgacgaactcgcca 280
              ||||||||||||||||||||
Sbjct: 713736 catcgacgacgaactcgcca 713717

---

>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the
             5' end of the Slc36a3 gene for solute carrier family 36
             (proton/amino acid symporter) member 3, two novel genes,
             the Tramd1 gene for tramdorin 1 (transmembrane domain rich
             protein), the Slc36a1 gene for solute carrier family 36
             (proton/amino acid symporter) member 1 and the gene for
             the ortholog of human and rat FAT tumor suppressor homolog
             2 (Drosophila) FAT2, complete sequence
          Length = 188782

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   accaggcctttgagctcatc 447
             ||||||||||||||||||||
Sbjct: 56511 accaggcctttgagctcatc 56492

---

>gb|AE011785.1| Xanthomonas axonopodis pv. citri str. 306,  section 163 of 469 of the
            complete genome
          Length = 11903

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  ccgcgcccgtggccacctcg 252
            ||||||||||||||||||||
Sbjct: 8873 ccgcgcccgtggccacctcg 8854

---

>gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, complete sequence
          Length = 197191

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 49    ccccttctccctcccaaccttggg 72
             |||||||||| |||||||||||||
Sbjct: 70853 ccccttctccttcccaaccttggg 70830

---

>gb|AF159555.1| Eastern equine encephalomyelitis virus isolate TX95-PV5-2547
           structural polyprotein gene, complete cds
          Length = 4114

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 207 caagaagcctgccccgaagccgaagcccgcgc 238
           |||||||||||| || ||||| ||||||||||
Sbjct: 262 caagaagcctgcgcccaagcctaagcccgcgc 293

---

>gb|AC154749.2| Mus musculus BAC clone RP24-399C21 from 17, complete sequence
          Length = 155483

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ctcccttcctgctgagctga 28
              ||||||||||||||||||||
Sbjct: 137483 ctcccttcctgctgagctga 137502

---

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 233     ccgcgcccgtggccacctcg 252
               ||||||||||||||||||||
Sbjct: 1736444 ccgcgcccgtggccacctcg 1736425


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,106,656
Number of Sequences: 3902068
Number of extensions: 3106656
Number of successful extensions: 66445
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65876
Number of HSP's gapped (non-prelim): 567
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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