ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet94e05 |
|---|---|
| Clone Library Name | barley_pub |
>AGAL_COFAR (Q42656) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) Length = 378 Score = 89.0 bits (219), Expect = 5e-18 Identities = 38/59 (64%), Positives = 44/59 (74%) Frame = +2 Query: 269 LNNGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWSYVKR 445 L NGL L P MGWNSWN F CN+ E LIRETADA+VS L LGY Y+N+DDCW+ + R Sbjct: 16 LANGLGLTPPMGWNSWNHFRCNLDEKLIRETADAMVSKGLAALGYKYINLDDCWAELNR 74
>AGAL_ORYSA (Q9FXT4) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) Length = 417 Score = 88.2 bits (217), Expect = 9e-18 Identities = 39/57 (68%), Positives = 42/57 (73%) Frame = +2 Query: 275 NGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWSYVKR 445 NGL PQMGWNSWN F C I E +IRETADALV+T L LGY YVNIDDCW+ R Sbjct: 58 NGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSR 114
>AGAL_CYATE (P14749) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) Length = 411 Score = 86.3 bits (212), Expect = 3e-17 Identities = 35/57 (61%), Positives = 43/57 (75%) Frame = +2 Query: 275 NGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWSYVKR 445 NGL P MGWNSWN F C+I E ++RETADA+VST L LGY Y+N+DDCW+ + R Sbjct: 50 NGLGQTPPMGWNSWNHFGCDINENVVRETADAMVSTGLAALGYQYINLDDCWAELNR 106
>MEL_ZYGMR (Q9P4V4) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) (MELr) Length = 470 Score = 80.9 bits (198), Expect = 1e-15 Identities = 37/66 (56%), Positives = 45/66 (68%) Frame = +2 Query: 236 LYETSNYGMLQLNNGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVN 415 L ET+ G+ NGL L PQMGWN+WN FACN+ E L+ TAD + L D+GYNYV Sbjct: 12 LVETA-LGVSPSYNGLGLTPQMGWNNWNTFACNVTEQLLLGTADRISELGLKDVGYNYVI 70 Query: 416 IDDCWS 433 +DDCWS Sbjct: 71 LDDCWS 76
>MEL_TORDE (Q9UVD6) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) (MELt) Length = 474 Score = 79.7 bits (195), Expect = 3e-15 Identities = 31/53 (58%), Positives = 40/53 (75%) Frame = +2 Query: 275 NGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 NGL L PQMGWN+WN FACN++E L+ T D + + L D+GY+YV +DDCWS Sbjct: 25 NGLGLTPQMGWNNWNTFACNVSEDLLLSTVDRIAALGLRDIGYHYVILDDCWS 77
>MEL_SACPA (Q09187) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) (MELp) Length = 471 Score = 79.0 bits (193), Expect = 5e-15 Identities = 33/60 (55%), Positives = 42/60 (70%) Frame = +2 Query: 254 YGMLQLNNGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 + +L NGL L PQMGW++WN FACN++E L+ TAD + L DLGY YV +DDCWS Sbjct: 17 FWVLPSYNGLGLTPQMGWDNWNTFACNVSEDLLLNTADRISDIGLKDLGYKYVILDDCWS 76
>MEL5_YEAST (P41946) Alpha-galactosidase 5 precursor (EC 3.2.1.22) (Melibiase| 5) (Alpha-D-galactoside galactohydrolase 5) Length = 471 Score = 79.0 bits (193), Expect = 5e-15 Identities = 32/60 (53%), Positives = 43/60 (71%) Frame = +2 Query: 254 YGMLQLNNGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 +G+ NGL L PQMGW+SWN FAC+++E L+ +TAD + L D+GY YV +DDCWS Sbjct: 17 FGVSPSYNGLGLTPQMGWDSWNTFACDVSEQLLLDTADRISDLGLKDMGYKYVILDDCWS 76
>MEL6_YEAST (P41947) Alpha-galactosidase 6 precursor (EC 3.2.1.22) (Melibiase| 6) (Alpha-D-galactoside galactohydrolase 6) Length = 471 Score = 77.8 bits (190), Expect = 1e-14 Identities = 31/60 (51%), Positives = 43/60 (71%) Frame = +2 Query: 254 YGMLQLNNGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 +G+ NGL L PQMGW++WN FAC+++E L+ +TAD + L D+GY YV +DDCWS Sbjct: 17 FGVSPSYNGLGLTPQMGWDNWNTFACDVSEQLLLDTADRISDLGLKDMGYKYVILDDCWS 76
>MEL_SACPS (Q03647) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) (MELx) Length = 471 Score = 77.4 bits (189), Expect = 2e-14 Identities = 31/53 (58%), Positives = 40/53 (75%) Frame = +2 Query: 275 NGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 NGL L PQMGW++WN FAC+++E L+ +TAD + L DLGY YV +DDCWS Sbjct: 24 NGLGLTPQMGWDNWNTFACDVSEQLLLDTADRISEIGLKDLGYTYVILDDCWS 76
>MEL2_YEAST (P41945) Alpha-galactosidase 2 precursor (EC 3.2.1.22) (Melibiase| 2) (Alpha-D-galactoside galactohydrolase 2) Length = 471 Score = 77.4 bits (189), Expect = 2e-14 Identities = 30/60 (50%), Positives = 43/60 (71%) Frame = +2 Query: 254 YGMLQLNNGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 +G+ NGL L PQMGW++WN FAC+++E L+ +TAD + L D+GY Y+ +DDCWS Sbjct: 17 FGVSPSYNGLGLTPQMGWDNWNTFACDVSEQLLLDTADRISDLGLKDMGYKYIILDDCWS 76
>MEL1_YEAST (P04824) Alpha-galactosidase 1 precursor (EC 3.2.1.22) (Melibiase| 1) (Alpha-D-galactoside galactohydrolase 1) Length = 471 Score = 77.4 bits (189), Expect = 2e-14 Identities = 30/60 (50%), Positives = 43/60 (71%) Frame = +2 Query: 254 YGMLQLNNGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 +G+ NGL L PQMGW++WN FAC+++E L+ +TAD + L D+GY Y+ +DDCWS Sbjct: 17 FGVSPSYNGLGLTPQMGWDNWNTFACDVSEQLLLDTADRISDLGLKDMGYKYIILDDCWS 76
>MEL_SACMI (Q11129) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) (MELj) Length = 471 Score = 76.6 bits (187), Expect = 3e-14 Identities = 31/53 (58%), Positives = 39/53 (73%) Frame = +2 Query: 275 NGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 NGL L PQMGW++WN FAC+++E L+ TAD + L DLGY YV +DDCWS Sbjct: 24 NGLGLTPQMGWDNWNTFACDVSEQLLLNTADRISEIGLKDLGYKYVILDDCWS 76
>MEL_ZYGCI (Q99172) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) Length = 469 Score = 76.3 bits (186), Expect = 3e-14 Identities = 30/53 (56%), Positives = 39/53 (73%) Frame = +2 Query: 275 NGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 NGL L PQMGW++WN F C++ E L+ TA+ +V L DLGYNY+ +DDCWS Sbjct: 23 NGLGLTPQMGWDNWNSFGCSVKEELLLGTAEKIVKLGLKDLGYNYIILDDCWS 75
>AGAL_SCHPO (Q9URZ0) Probable alpha-galactosidase precursor (EC 3.2.1.22)| (Melibiase) (Alpha-D-galactoside galactohydrolase) Length = 436 Score = 74.7 bits (182), Expect = 1e-13 Identities = 32/57 (56%), Positives = 40/57 (70%) Frame = +2 Query: 275 NGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWSYVKR 445 NGL L PQMGWNSWN +AC+I E++I A A+ L DLGY Y+ +DDCWS +R Sbjct: 27 NGLGLKPQMGWNSWNKYACDIDESIILNNAKAIKEEGLLDLGYEYIVMDDCWSKHER 83
>AGAL_ASPNG (P28351) Alpha-galactosidase A precursor (EC 3.2.1.22) (Melibiase)| Length = 545 Score = 63.5 bits (153), Expect = 2e-10 Identities = 28/64 (43%), Positives = 39/64 (60%) Frame = +2 Query: 254 YGMLQLNNGLALAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCWS 433 YG ++ L P MG+N+W F C++ ETL ETAD + + L D GYN +N+DDCW Sbjct: 30 YGSIE-QPSLLPTPPMGFNNWARFMCDLNETLFTETADTMAANGLRDAGYNRINLDDCWM 88 Query: 434 YVKR 445 +R Sbjct: 89 AYQR 92
>NAGAB_CHICK (Q90744) Alpha-N-acetylgalactosaminidase (EC 3.2.1.49)| (Alpha-galactosidase B) Length = 405 Score = 62.8 bits (151), Expect = 4e-10 Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 10/69 (14%) Frame = +2 Query: 269 LNNGLALAPQMGWNSWNFFACN----------IAETLIRETADALVSTXLTDLGYNYVNI 418 L NGLA P MGW +W F CN I+E L E AD + +LGY Y+NI Sbjct: 1 LENGLARTPPMGWLAWERFRCNVNCREDPRQCISEMLFMEMADRIAEDGWRELGYKYINI 60 Query: 419 DDCWSYVKR 445 DDCW+ +R Sbjct: 61 DDCWAAKQR 69
>NAGAB_RAT (Q66H12) Alpha-N-acetylgalactosaminidase precursor (EC 3.2.1.49)| (Alpha-galactosidase B) Length = 415 Score = 62.0 bits (149), Expect = 7e-10 Identities = 31/67 (46%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Frame = +2 Query: 260 MLQLNNGLALAPQMGWNSWNFFACNI----------AETLIRETADALVSTXLTDLGYNY 409 +L L NGL P MGW +W F CNI +E L E AD L DLGY Y Sbjct: 15 VLMLENGLLRTPPMGWLAWERFRCNINCEEDPKNCISERLFMEMADRLAQDGWRDLGYVY 74 Query: 410 VNIDDCW 430 +NIDDCW Sbjct: 75 LNIDDCW 81
>NAGAB_MOUSE (Q9QWR8) Alpha-N-acetylgalactosaminidase precursor (EC 3.2.1.49)| (Alpha-galactosidase B) Length = 415 Score = 62.0 bits (149), Expect = 7e-10 Identities = 31/67 (46%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Frame = +2 Query: 260 MLQLNNGLALAPQMGWNSWNFFACNI----------AETLIRETADALVSTXLTDLGYNY 409 +L L NGL P MGW +W F CNI +E L E AD L DLGY Y Sbjct: 15 VLMLENGLLRTPPMGWLAWERFRCNIDCVEDPKNCISERLFMEMADRLAQDGWRDLGYVY 74 Query: 410 VNIDDCW 430 +NIDDCW Sbjct: 75 LNIDDCW 81
>NAGAB_HUMAN (P17050) Alpha-N-acetylgalactosaminidase precursor (EC 3.2.1.49)| (Alpha-galactosidase B) Length = 411 Score = 62.0 bits (149), Expect = 7e-10 Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 10/67 (14%) Frame = +2 Query: 260 MLQLNNGLALAPQMGWNSWNFFACNI----------AETLIRETADALVSTXLTDLGYNY 409 +L L+NGL P MGW +W F CNI +E L E AD + D+GY Y Sbjct: 15 VLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTY 74 Query: 410 VNIDDCW 430 +NIDDCW Sbjct: 75 LNIDDCW 81
>NAGAB_BOVIN (Q58DH9) Alpha-N-acetylgalactosaminidase precursor (EC 3.2.1.49)| (Alpha-galactosidase B) Length = 411 Score = 60.8 bits (146), Expect = 1e-09 Identities = 31/67 (46%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Frame = +2 Query: 260 MLQLNNGLALAPQMGWNSWNFFACNI----------AETLIRETADALVSTXLTDLGYNY 409 +L L NGL P MGW +W F CNI +E L E AD L DLGY Y Sbjct: 15 VLVLENGLLRKPPMGWLAWERFRCNIDCSEDPKNCISEQLFMEMADRLAQDGWRDLGYVY 74 Query: 410 VNIDDCW 430 +NIDDCW Sbjct: 75 LNIDDCW 81
>AGAL_HUMAN (P06280) Alpha-galactosidase A precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) (Alpha-D-galactosidase A) (Agalsidase alfa) Length = 429 Score = 59.3 bits (142), Expect = 4e-09 Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Frame = +2 Query: 257 GMLQLNNGLALAPQMGWNSWNFFACN----------IAETLIRETADALVSTXLTDLGYN 406 G L+NGLA P MGW W F CN I+E L E A+ +VS D GY Sbjct: 28 GARALDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYE 87 Query: 407 YVNIDDCWSYVKR 445 Y+ IDDCW +R Sbjct: 88 YLCIDDCWMAPQR 100
>AGAL_MOUSE (P51569) Alpha-galactosidase A precursor (EC 3.2.1.22) (Melibiase)| (Alpha-D-galactoside galactohydrolase) (Alpha-D-galactosidase A) Length = 419 Score = 59.3 bits (142), Expect = 4e-09 Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 10/73 (13%) Frame = +2 Query: 257 GMLQLNNGLALAPQMGWNSWNFFACN----------IAETLIRETADALVSTXLTDLGYN 406 G+ L+NGLA P MGW W F CN I+E L + A+ +VS D GY+ Sbjct: 28 GVRALDNGLARTPTMGWLHWERFMCNLDCQEEPDACISEQLFMQMAELMVSDGWRDAGYD 87 Query: 407 YVNIDDCWSYVKR 445 Y+ IDDCW +R Sbjct: 88 YLCIDDCWMAPER 100
>Y619_METMP (Q6LZK8) UPF0251 protein MMP0619| Length = 131 Score = 29.6 bits (65), Expect = 3.6 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +2 Query: 290 APQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDC 427 A +MG + F+ NI ++ ++ ADAL++ + D+G Y I DC Sbjct: 60 ADEMGISRRVFW--NILKSARKKVADALINGKMIDIGGGYYKIRDC 103
>COAT_SPMV (Q86993) Coat protein (Capsid protein)| Length = 157 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +2 Query: 287 LAPQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNYVNIDDCW 430 L P++G N+W F AET++ D LVST + N V + C+ Sbjct: 102 LTPRVGQNNWFFGNTEEAETIL--AIDGLVSTKGANAPSNTVIVTGCF 147
>ALR_WIGBR (Q8D2H8) Alanine racemase (EC 5.1.1.1)| Length = 357 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +2 Query: 221 AALRRLYETSNYGMLQLNNGLALAPQMGWN 310 AAL+ L ETS + +L+LN + L + GWN Sbjct: 45 AALKGLKETSGFAVLELNEAVLLR-ENGWN 73
>MLE_DROME (P24785) Dosage compensation regulator (EC 3.6.1.-) (ATP-dependent| RNA helicase mle) (Protein male-less) (Protein no action potential) Length = 1293 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 293 PQMGWNSWNFFACNIAETLIRETADALVSTXLTDLGYNY 409 PQ WN+W+ ACNI E L +T + DL +Y Sbjct: 331 PQANWNTWH--ACNIDE-------GELATTSIDDLSMDY 360 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,109,606 Number of Sequences: 219361 Number of extensions: 594058 Number of successful extensions: 2174 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2167 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
