>Y114_CHLMU (Q9PLI5) Hypothetical protein TC0114|
          Length = 122

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 22/46 (47%), Positives = 25/46 (54%)
 Frame = -2

Query: 446 PQLTFPMVGEQSNTW*ILLHNDRKSRHRRIKKQRRYERLAATSQLS 309
           P     ++GEQ N W +L   D  SRHR  K  RRYE L A S LS
Sbjct: 58  PSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLLS 103

>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)|
          Length = 634

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 124 DVPPQPNSPPDNVFRPDRPDKTGP 53
           D PPQP+ P DN  +PD+PD   P
Sbjct: 145 DNPPQPDIPCDNPPQPDQPDDNPP 168

>MMP15_MOUSE (O54732) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)|
           (MMP-15) (Membrane-type matrix metalloproteinase 2)
           (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix
           metalloproteinase) (MT2-MMP) (MT2MMP)
          Length = 657

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 118 PPQPNSPPDNVFRPDRPDKTGPWSQKEGT 32
           PP+P  PP    +P+RP K GP  Q   T
Sbjct: 327 PPRPPQPPHPGGKPERPPKPGPPPQPRAT 355

>HXC11_HUMAN (O43248) Homeobox protein Hox-C11|
          Length = 304

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -3

Query: 418 NNPTLGEFCFTMIGRADIE-GSKSNVAMNAWLPQASYPCGNFSDTSSFKLRRSKGSIGHA 242
           N+  LG FC         + G + + A N +LP  +Y    FS  SSF  +     I + 
Sbjct: 3   NSVNLGNFCSPSRKERGADFGERGSCASNLYLPSCTYYMPEFSTVSSFLPQAPSRQISYP 62

Query: 241 FTVRI 227
           ++ ++
Sbjct: 63  YSAQV 67

>MMP15_HUMAN (P51511) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)|
           (MMP-15) (Membrane-type matrix metalloproteinase 2)
           (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix
           metalloproteinase) (MT2-MMP) (MT2MMP) (SMCP-2)
          Length = 669

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 118 PPQPNSPPDNVFRPDRPDKTGPWSQKEGT 32
           PP+P  PP    +P+RP K GP  Q   T
Sbjct: 331 PPRPPQPPPPGGKPERPPKPGPPVQPRAT 359

>ENR1_HUMAN (Q14264) HERV-R_7q21.2 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (ERV3 envelope protein) (ERV-3
           envelope protein) (HERV-R envelope protein) (ERV-R
           envelope protein) [Contains: Surface protein (SU);
           Transmembrane prote
          Length = 604

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 445 PSSRSLWWVNNPTLGEFCFTMIGRA 371
           PSS+S+W++    +G+FC    G+A
Sbjct: 328 PSSQSIWFLKTSIIGKFCIARWGKA 352

>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)|
           (Chromatin assembly factor I p150 subunit) (CAF-I 150
           kDa subunit) (CAF-Ip150)
          Length = 938

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
 Frame = +2

Query: 185 NKRVKARLILISSTNTNRESVAYRSFRSSEFEARGVRKVTTG------ITGLWQPSVHSD 346
           ++++ A+L+ +   N N   V  R F+  E   RG+    TG       T L  P+   D
Sbjct: 714 DEQILAQLLPLLHGNVNGSKVIIREFQ--EHCRRGLLSNHTGSPRTPSTTYLHTPTPSED 771

Query: 347 VAF*S-------FDVGSSYHCEAEFTKCWIVHP 424
            A  S           S Y    +F  CW VHP
Sbjct: 772 AAIPSKSRLKRLISENSVYEKRPDFRMCWYVHP 804

>ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 9) (ADAM-TS
           9) (ADAM-TS9)
          Length = 1935

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -3

Query: 325 PQASYPCGNFSDTSSFKLRRSKGSIGHAFTVR-IRTGNQNQTSFY 194
           PQA Y    F     F L  + G I   FTV  + T   NQT FY
Sbjct: 96  PQAHYRLSAFGQQFLFNLTANAGFIAPLFTVTLLGTPGVNQTKFY 140

>FL3H_VITVI (P41090) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)|
           (Flavonone-3-hydroxylase) (F3H) (FHT)
          Length = 364

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 210 F*FPVRIRTVKAWPIDPLDLRSLKLEVSEKL 302
           F +P+R R    WP  P   RS+  E SEKL
Sbjct: 135 FSYPLRTRDYSRWPDKPEGWRSVTQEYSEKL 165

>CEMA_SPIOL (Q9M3L4) Chloroplast envelope membrane protein|
          Length = 229

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 394 CFTMIGRADIEGSKSNVAMNAWLPQASYPCGNFSDT 287
           CF ++G   I G+K  + +N+W+ +  Y   N SDT
Sbjct: 116 CFLILGGYSILGNKELILLNSWVQEFLY---NLSDT 148

>CEMA_ANTFO (Q85AP4) Chloroplast envelope membrane protein|
          Length = 508

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 403 GEFCFTMIGRADIEGSKSNVAMNAWLPQASYPCGNFSDT 287
           G  CFT +G   I G K    +N+W+ ++ Y   + SDT
Sbjct: 392 GMICFTTLGALFILGKKRLSVLNSWIQESFY---SLSDT 427

>COL19_CAEEL (P18835) Cuticle collagen 19 precursor|
          Length = 289

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 118 PPQPNSPPDNVFRPDRPDKTGPWSQKEGTCPASDP 14
           P  P   P   ++P +P + GP   +  T PA +P
Sbjct: 199 PAGPRGEPGTEYKPGQPGRPGPQGPRGETGPAGNP 233

>YPQR_ACICA (P07783) Hypothetical protein in PQQ-III 3'region (ORF R)|
           (Fragment)
          Length = 315

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = -3

Query: 337 NAWLPQASYPCGNFSDTSSFKLRRSKGSIGHAFTVR-IRTGNQNQTSFYPFVPHEISVLV 161
           +A  PQA     N +D     +R SKG +G  F V  +R+  Q                +
Sbjct: 230 HALCPQAR----NLTDPQLKAIRESKGMVGVNFDVAFLRSDGQRNAD----------TSI 275

Query: 160 ELILGHLRYLLTDVPP 113
           ++IL HL YL+  V P
Sbjct: 276 DVILEHLEYLMDRVAP 291

>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 96  LTMSSARIGPIKPGLGAKRRGHAPLPTH 13
           L  S+A  GP  P  GA+   H P+ TH
Sbjct: 451 LANSNAHPGPFPPSTGAQSTAHPPVSTH 478

>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (mNIFK)
          Length = 317

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 307 CGNFSDTSSFKLRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 161
           C  F D S F+L RSK           RTGN    +F  F   +++ +V
Sbjct: 67  CAQFGDISRFRLSRSK-----------RTGNSKGYAFVEFESEDVAKIV 104

>GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein)
          Length = 588

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 23  SGACPLLLAPRPGFIGPIRAEDIVRWGVWLGRHIC*KITQVS*DELNENRNL-VWNKRVK 199
           S A P  + P+P    P+  +D+V   V+LGR IC  +     D +  +  L  W  R+ 
Sbjct: 464 SSASPTGILPQP----PVNNQDLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMN 519

Query: 200 A 202
           +
Sbjct: 520 S 520

>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 96  LTMSSARIGPIKPGLGAKRRGHAPLPTH 13
           L  S+A  GP  P  GA+   H P+ TH
Sbjct: 452 LANSNAHPGPFPPSTGAQSTAHPPVSTH 479


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,108,816
Number of Sequences: 219361
Number of extensions: 1489596
Number of successful extensions: 4582
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4574
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)