ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet94e03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA sequence Length = 770 Score = 123 bits (62), Expect = 5e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 316 gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 375 ||||| ||||| |||||||||| ||||| ||||||||| ||||| ||||| ||||| Sbjct: 153 gttaactatgtcgctggtgacctcttccataccgtcccaccagctcaggccgtcatgctc 212 Query: 376 aagcttgttctgcacttctggagcgacgaggattgcatcaagatcctcgc 425 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 213 aagcttgttctacacttctggagcgacgaggattgcatcaagatcctcgc 262 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 178 gagtctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcc 237 ||||| |||||||||||| | ||||||||||| ||||| || ||| |||||||| ||||| Sbjct: 24 gagtcactcaccgactgctgtggtggtgatgggacgaccgcaagggccatcgtcaaggcc 83 Query: 238 tacccgcacatcaactgcaccgtgctcgaccttccaaaggt 278 | |||||| ||||| |||| ||| | |||||||||||||| Sbjct: 84 ttcccgcatatcaagtgcaatgtgttggaccttccaaaggt 124
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 152 agtgccgtgagctgttcgaggggcttgagtctctcaccgactgcggcggtggtgatggca 211 ||||||||||| ||||| ||||| | ||||| |||||||| ||| |||||||||| |||| Sbjct: 141087 agtgccgtgaggtgttccagggggtggagtcgctcaccgattgccgcggtggtgacggca 141028 Query: 212 cgacggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttc 271 | |||||| | ||||||||||||||| ||| |||||||| | ||||||||| ||| ||| Sbjct: 141027 gggcggcgaaggccatcgtcgaggccttcccacacatcaagttcaccgtgctggactttc 140968 Query: 272 c 272 | Sbjct: 140967 c 140967 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 19 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 78 |||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 141220 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 141161 Query: 79 ccggag 84 |||||| Sbjct: 141160 ccggag 141155 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 178 gagtctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcc 237 ||||| || |||||||||||||| || || |||||| |||||||| |||||| ||||||| Sbjct: 88826 gagtcgctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgaggcc 88767 Query: 238 tacccgcacatcaa 251 | ||||||| |||| Sbjct: 88766 ttcccgcacgtcaa 88753 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 19 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 78 |||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| || Sbjct: 117581 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 117522 Query: 79 ccggag 84 |||||| Sbjct: 117521 ccggag 117516 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || |||||| | |||||| | ||||||||||||| | ||| || Sbjct: 117413 accgactgccgcggcggcgatggcgcagcggcgaaggccatcgtcgaggcgttcccacat 117354 Query: 247 atcaactgcaccgtgctcgaccttcc 272 ||||| ||||||||||| ||| |||| Sbjct: 117353 atcaagtgcaccgtgctggactttcc 117328 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tggagcgacgaggattgcatcaagatcct 422 |||||||||||||| ||||| |||||||| Sbjct: 81166 tggagcgacgaggactgcataaagatcct 81138 Score = 40.1 bits (20), Expect = 5.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 331 ggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctcaag 378 |||||| |||||| || | |||||||||||||||| || |||||||| Sbjct: 117278 ggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaag 117231
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Plus Query: 152 agtgccgtgagctgttcgaggggcttgagtctctcaccgactgcggcggtggtgatggca 211 |||| |||||| ||||| ||||||| ||||| || || ||||||||||| || || ||| Sbjct: 60486 agtgtcgtgaggtgttccaggggctggagtcgctgacagactgcggcggcggcgacggcg 60545 Query: 212 cgacggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttc 271 ||||||||||| ||||||||||||||| ||| ||| |||| ||||| ||||| ||||||| Sbjct: 60546 cgacggcgaggaccatcgtcgaggccttcccacacgtcaagtgcactgtgctggaccttc 60605 Query: 272 c 272 | Sbjct: 60606 c 60606 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || || ||||||||||||||| |||||| | |||||||||| || Sbjct: 5264 accgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctcat 5323 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 |||| ||||| ||||| |||||||| ||||| || ||||| Sbjct: 5324 gtcaagtgcactgtgctggaccttcccaaggtgatcgacaa 5364 Score = 61.9 bits (31), Expect = 2e-06 Identities = 121/151 (80%) Strand = Plus / Minus Query: 122 accacatggggatcggccccgtgctccgtcagtgccgtgagctgttcgaggggcttgagt 181 |||||||||||||||||| | |||||| || |||| | ||||||||||||| |||| Sbjct: 16720 accacatggggatcggcctggcgctccgcgagagccgccgggtgttcgaggggctggagt 16661 Query: 182 ctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacc 241 | || |||||||||||| || || ||| || |||||||| |||||||| ||| | || Sbjct: 16660 cgctggtcgactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcc 16601 Query: 242 cgcacatcaactgcaccgtgctcgaccttcc 272 || ||||| ||||||||||| |||||||| Sbjct: 16600 cgggaatcaagtgcaccgtgctggaccttcc 16570 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 316 gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 375 ||||| |||||| | |||||| |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 5384 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 5443 Query: 376 aag 378 ||| Sbjct: 5444 aag 5446 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 22 ccgttcgaggacgtgcacggcgc 44 ||||||||||||||||||||||| Sbjct: 5099 ccgttcgaggacgtgcacggcgc 5121
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 152 agtgccgtgagctgttcgaggggcttgagtctctcaccgactgcggcggtggtgatggca 211 |||| |||||| ||||| ||||||| ||||| || || ||||||||||| || || ||| Sbjct: 11439051 agtgtcgtgaggtgttccaggggctggagtcgctgacagactgcggcggcggcgacggcg 11438992 Query: 212 cgacggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttc 271 ||||||||||| ||||||||||||||| ||| ||| |||| ||||| ||||| ||||||| Sbjct: 11438991 cgacggcgaggaccatcgtcgaggccttcccacacgtcaagtgcactgtgctggaccttc 11438932 Query: 272 c 272 | Sbjct: 11438931 c 11438931 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 152 agtgccgtgagctgttcgaggggcttgagtctctcaccgactgcggcggtggtgatggca 211 ||||||||||| ||||| ||||| | ||||| |||||||| ||| |||||||||| |||| Sbjct: 11354729 agtgccgtgaggtgttccagggggtggagtcgctcaccgattgccgcggtggtgacggca 11354670 Query: 212 cgacggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttc 271 | |||||| | ||||||||||||||| ||| |||||||| | ||||||||| ||| ||| Sbjct: 11354669 gggcggcgaaggccatcgtcgaggccttcccacacatcaagttcaccgtgctggactttc 11354610 Query: 272 c 272 | Sbjct: 11354609 c 11354609 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || || ||||||||||||||| |||||| | |||||||||| || Sbjct: 11494273 accgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctcat 11494214 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 |||| ||||| ||||| |||||||| ||||| || ||||| Sbjct: 11494213 gtcaagtgcactgtgctggaccttcccaaggtgatcgacaa 11494173 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 214 acggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttcca 273 ||||||||| |||||||| |||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 11549945 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcca 11549886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 19 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 78 |||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 11354862 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 11354803 Query: 79 ccggag 84 |||||| Sbjct: 11354802 ccggag 11354797 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 178 gagtctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcc 237 ||||| || |||||||||||||| || || |||||| |||||||| |||||| ||||||| Sbjct: 11302468 gagtcgctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgaggcc 11302409 Query: 238 tacccgcacatcaa 251 | ||||||| |||| Sbjct: 11302408 ttcccgcacgtcaa 11302395 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 |||||||||| ||| || || ||| ||||||||||| |||||| || ||| | ||||||| Sbjct: 7138392 accgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgcac 7138333 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct: 7138332 atcaagtgcacggtgctggacctcccgaaggtgatcgacaa 7138292 Score = 61.9 bits (31), Expect = 2e-06 Identities = 121/151 (80%) Strand = Plus / Plus Query: 122 accacatggggatcggccccgtgctccgtcagtgccgtgagctgttcgaggggcttgagt 181 |||||||||||||||||| | |||||| || |||| | ||||||||||||| |||| Sbjct: 11482817 accacatggggatcggcctggcgctccgcgagagccgccgggtgttcgaggggctggagt 11482876 Query: 182 ctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacc 241 | || |||||||||||| || || ||| || |||||||| |||||||| ||| | || Sbjct: 11482877 cgctggtcgactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcc 11482936 Query: 242 cgcacatcaactgcaccgtgctcgaccttcc 272 || ||||| ||||||||||| |||||||| Sbjct: 11482937 cgggaatcaagtgcaccgtgctggaccttcc 11482967 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 316 gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 375 ||||| |||||| | |||||| |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 11494153 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 11494094 Query: 376 aag 378 ||| Sbjct: 11494093 aag 11494091 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 19 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 78 |||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| || Sbjct: 11331223 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 11331164 Query: 79 ccggag 84 |||||| Sbjct: 11331163 ccggag 11331158 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || |||||| | |||||| | ||||||||||||| | ||| || Sbjct: 11331055 accgactgccgcggcggcgatggcgcagcggcgaaggccatcgtcgaggcgttcccacat 11330996 Query: 247 atcaactgcaccgtgctcgaccttcc 272 ||||| ||||||||||| ||| |||| Sbjct: 11330995 atcaagtgcaccgtgctggactttcc 11330970 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 313 gtggttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttg 372 |||||||| |||||| | |||||| |||| || | ||||||||||||||||||||| | Sbjct: 7138272 gtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgctt 7138213 Query: 373 ctcaag 378 |||||| Sbjct: 7138212 ctcaag 7138207 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 13 gtgccctcgccgttcgaggacgtgcacggcgc 44 ||||| ||||||||||||||| |||||||||| Sbjct: 11550146 gtgccgtcgccgttcgaggacctgcacggcgc 11550115 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 13 gtgccctcgccgttcgaggacgtgcacggcgc 44 ||||| |||||||||||||||| ||||||||| Sbjct: 7138569 gtgccgtcgccgttcgaggacgcgcacggcgc 7138538 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 22 ccgttcgaggacgtgcacggcgc 44 ||||||||||||||||||||||| Sbjct: 11494438 ccgttcgaggacgtgcacggcgc 11494416 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tggagcgacgaggattgcatcaagatcct 422 |||||||||||||| ||||| |||||||| Sbjct: 11294808 tggagcgacgaggactgcataaagatcct 11294780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gctcatccacgacgccgtcg 112 |||||||||||||||||||| Sbjct: 21883010 gctcatccacgacgccgtcg 21883029 Score = 40.1 bits (20), Expect = 5.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 331 ggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctcaag 378 |||||| |||||| || | |||||||||||||||| || |||||||| Sbjct: 11330920 ggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaag 11330873
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 152 agtgccgtgagctgttcgaggggcttgagtctctcaccgactgcggcggtggtgatggca 211 |||| |||||| ||||| ||||||| ||||| || || ||||||||||| || || ||| Sbjct: 11518240 agtgtcgtgaggtgttccaggggctggagtcgctgacagactgcggcggcggcgacggcg 11518181 Query: 212 cgacggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttc 271 ||||||||||| ||||||||||||||| ||| ||| |||| ||||| ||||| ||||||| Sbjct: 11518180 cgacggcgaggaccatcgtcgaggccttcccacacgtcaagtgcactgtgctggaccttc 11518121 Query: 272 c 272 | Sbjct: 11518120 c 11518120 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 152 agtgccgtgagctgttcgaggggcttgagtctctcaccgactgcggcggtggtgatggca 211 ||||||||||| ||||| ||||| | ||||| |||||||| ||| |||||||||| |||| Sbjct: 11433918 agtgccgtgaggtgttccagggggtggagtcgctcaccgattgccgcggtggtgacggca 11433859 Query: 212 cgacggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttc 271 | |||||| | ||||||||||||||| ||| |||||||| | ||||||||| ||| ||| Sbjct: 11433858 gggcggcgaaggccatcgtcgaggccttcccacacatcaagttcaccgtgctggactttc 11433799 Query: 272 c 272 | Sbjct: 11433798 c 11433798 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || || ||||||||||||||| |||||| | |||||||||| || Sbjct: 11573462 accgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctcat 11573403 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 |||| ||||| ||||| |||||||| ||||| || ||||| Sbjct: 11573402 gtcaagtgcactgtgctggaccttcccaaggtgatcgacaa 11573362 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 214 acggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttcca 273 ||||||||| |||||||| |||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 11629134 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcca 11629075 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 19 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 78 |||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 11434051 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 11433992 Query: 79 ccggag 84 |||||| Sbjct: 11433991 ccggag 11433986 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 178 gagtctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcc 237 ||||| || |||||||||||||| || || |||||| |||||||| |||||| ||||||| Sbjct: 11381657 gagtcgctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgaggcc 11381598 Query: 238 tacccgcacatcaa 251 | ||||||| |||| Sbjct: 11381597 ttcccgcacgtcaa 11381584 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 |||||||||| ||| || || ||| ||||||||||| |||||| || ||| | ||||||| Sbjct: 7204363 accgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgcac 7204304 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct: 7204303 atcaagtgcacggtgctggacctcccgaaggtgatcgacaa 7204263 Score = 61.9 bits (31), Expect = 2e-06 Identities = 121/151 (80%) Strand = Plus / Plus Query: 122 accacatggggatcggccccgtgctccgtcagtgccgtgagctgttcgaggggcttgagt 181 |||||||||||||||||| | |||||| || |||| | ||||||||||||| |||| Sbjct: 11562006 accacatggggatcggcctggcgctccgcgagagccgccgggtgttcgaggggctggagt 11562065 Query: 182 ctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacc 241 | || |||||||||||| || || ||| || |||||||| |||||||| ||| | || Sbjct: 11562066 cgctggtcgactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcc 11562125 Query: 242 cgcacatcaactgcaccgtgctcgaccttcc 272 || ||||| ||||||||||| |||||||| Sbjct: 11562126 cgggaatcaagtgcaccgtgctggaccttcc 11562156 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 316 gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 375 ||||| |||||| | |||||| |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 11573342 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 11573283 Query: 376 aag 378 ||| Sbjct: 11573282 aag 11573280 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 19 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 78 |||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| || Sbjct: 11410412 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 11410353 Query: 79 ccggag 84 |||||| Sbjct: 11410352 ccggag 11410347 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || |||||| | |||||| | ||||||||||||| | ||| || Sbjct: 11410244 accgactgccgcggcggcgatggcgcagcggcgaaggccatcgtcgaggcgttcccacat 11410185 Query: 247 atcaactgcaccgtgctcgaccttcc 272 ||||| ||||||||||| ||| |||| Sbjct: 11410184 atcaagtgcaccgtgctggactttcc 11410159 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 313 gtggttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttg 372 |||||||| |||||| | |||||| |||| || | ||||||||||||||||||||| | Sbjct: 7204243 gtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgctt 7204184 Query: 373 ctcaag 378 |||||| Sbjct: 7204183 ctcaag 7204178 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 13 gtgccctcgccgttcgaggacgtgcacggcgc 44 ||||| ||||||||||||||| |||||||||| Sbjct: 11629335 gtgccgtcgccgttcgaggacctgcacggcgc 11629304 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 13 gtgccctcgccgttcgaggacgtgcacggcgc 44 ||||| |||||||||||||||| ||||||||| Sbjct: 7204540 gtgccgtcgccgttcgaggacgcgcacggcgc 7204509 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 22 ccgttcgaggacgtgcacggcgc 44 ||||||||||||||||||||||| Sbjct: 11573627 ccgttcgaggacgtgcacggcgc 11573605 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tggagcgacgaggattgcatcaagatcct 422 |||||||||||||| ||||| |||||||| Sbjct: 11373997 tggagcgacgaggactgcataaagatcct 11373969 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gctcatccacgacgccgtcg 112 |||||||||||||||||||| Sbjct: 22193209 gctcatccacgacgccgtcg 22193228 Score = 40.1 bits (20), Expect = 5.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 331 ggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctcaag 378 |||||| |||||| || | |||||||||||||||| || |||||||| Sbjct: 11410109 ggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaag 11410062
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || || ||||||||||||||| |||||| | |||||||||| || Sbjct: 119515 accgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctcat 119574 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 |||| ||||| ||||| |||||||| ||||| || ||||| Sbjct: 119575 gtcaagtgcactgtgctggaccttcccaaggtgatcgacaa 119615 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 214 acggcgaggtccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttcca 273 ||||||||| |||||||| |||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 63843 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcca 63902 Score = 61.9 bits (31), Expect = 2e-06 Identities = 121/151 (80%) Strand = Plus / Minus Query: 122 accacatggggatcggccccgtgctccgtcagtgccgtgagctgttcgaggggcttgagt 181 |||||||||||||||||| | |||||| || |||| | ||||||||||||| |||| Sbjct: 130971 accacatggggatcggcctggcgctccgcgagagccgccgggtgttcgaggggctggagt 130912 Query: 182 ctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacc 241 | || |||||||||||| || || ||| || |||||||| |||||||| ||| | || Sbjct: 130911 cgctggtcgactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcc 130852 Query: 242 cgcacatcaactgcaccgtgctcgaccttcc 272 || ||||| ||||||||||| |||||||| Sbjct: 130851 cgggaatcaagtgcaccgtgctggaccttcc 130821 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 316 gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 375 ||||| |||||| | |||||| |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 119635 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 119694 Query: 376 aag 378 ||| Sbjct: 119695 aag 119697 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 13 gtgccctcgccgttcgaggacgtgcacggcgc 44 ||||| ||||||||||||||| |||||||||| Sbjct: 63642 gtgccgtcgccgttcgaggacctgcacggcgc 63673 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 22 ccgttcgaggacgtgcacggcgc 44 ||||||||||||||||||||||| Sbjct: 119350 ccgttcgaggacgtgcacggcgc 119372
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 316 gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 375 ||||| |||||| | |||||| |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 795 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 854 Query: 376 aagcttgttctgcacttctggagcgacgaggattgcatcaagatc 420 |||||||| ||||| ||||||||| || |||||| | |||||| Sbjct: 855 aagcttgtattgcaccactggagcgatgatgattgcgtgaagatc 899 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || || ||||||||||||||| |||||| | |||||||||| || Sbjct: 675 accgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctcat 734 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 |||| ||||| ||||| |||||||| ||||| || ||||| Sbjct: 735 gtcaagtgcactgtgctggaccttcccaaggtgatcgacaa 775 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 22 ccgttcgaggacgtgcacggcgc 44 ||||||||||||||||||||||| Sbjct: 510 ccgttcgaggacgtgcacggcgc 532
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 316 gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 375 ||||| |||||| | |||||| |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 800 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 859 Query: 376 aagcttgttctgcacttctggagcgacgaggattgcatcaagatc 420 |||||||| ||||| ||||||||| || |||||| | |||||| Sbjct: 860 aagcttgtattgcaccactggagcgatgatgattgcgtgaagatc 904 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || || ||||||||||||||| |||||| | |||||||||| || Sbjct: 680 accgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctcat 739 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 |||| ||||| ||||| |||||||| ||||| || ||||| Sbjct: 740 gtcaagtgcactgtgctggaccttcccaaggtgatcgacaa 780 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 22 ccgttcgaggacgtgcacggcgc 44 ||||||||||||||||||||||| Sbjct: 515 ccgttcgaggacgtgcacggcgc 537
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 |||||||||| ||| || || ||| ||||||||||| |||||| || ||| | ||||||| Sbjct: 44163 accgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgcac 44222 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct: 44223 atcaagtgcacggtgctggacctcccgaaggtgatcgacaa 44263 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 313 gtggttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttg 372 |||||||| |||||| | |||||| |||| || | ||||||||||||||||||||| | Sbjct: 44283 gtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgctt 44342 Query: 373 ctcaag 378 |||||| Sbjct: 44343 ctcaag 44348 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 13 gtgccctcgccgttcgaggacgtgcacggcgc 44 ||||| |||||||||||||||| ||||||||| Sbjct: 43986 gtgccgtcgccgttcgaggacgcgcacggcgc 44017
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 |||||||||| ||| || || ||| ||||||||||| |||||| || ||| | ||||||| Sbjct: 51612 accgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgcac 51553 Query: 247 atcaactgcaccgtgctcgaccttccaaaggtcatggacaa 287 ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct: 51552 atcaagtgcacggtgctggacctcccgaaggtgatcgacaa 51512 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 313 gtggttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttg 372 |||||||| |||||| | |||||| |||| || | ||||||||||||||||||||| | Sbjct: 51492 gtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgctt 51433 Query: 373 ctcaag 378 |||||| Sbjct: 51432 ctcaag 51427 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 13 gtgccctcgccgttcgaggacgtgcacggcgc 44 ||||| |||||||||||||||| ||||||||| Sbjct: 51789 gtgccgtcgccgttcgaggacgcgcacggcgc 51758
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 331 ggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctcaagcttgttctgcac 390 |||||| |||||| || | |||||||||||||||| || ||||||||||||| || ||| Sbjct: 827 ggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaagcttgtgcttcac 886 Query: 391 ttctggagcgacgaggattg 410 |||||| ||||||||||| Sbjct: 887 cactggagtgacgaggattg 906 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 187 accgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacccgcac 246 ||||||||| |||| || |||||| | |||||| | ||||||||||||| | ||| || Sbjct: 692 accgactgccgcggcggcgatggcgcagcggcgaaggccatcgtcgaggcgttcccacat 751 Query: 247 atcaactgcaccgtgctcgaccttcc 272 ||||| ||||||||||| ||| |||| Sbjct: 752 atcaagtgcaccgtgctggactttcc 777 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 19 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 78 |||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| || Sbjct: 524 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 583 Query: 79 ccggag 84 |||||| Sbjct: 584 ccggag 589
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 371 tgctcaagcttgttctgcacttctggagcgacgaggattgcatcaagatcct 422 |||||||||| || |||||||||||||||||||| || ||| |||||||||| Sbjct: 802 tgctcaagctcgtcctgcacttctggagcgacgacgactgcgtcaagatcct 853 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgctcgaccttcc 272 |||||||| |||||| ||| ||||||| |||||||||||| ||||||| Sbjct: 694 ccatcgtcaaggccttcccagacatcaagtgcaccgtgctcaaccttcc 742
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 61.9 bits (31), Expect = 2e-06 Identities = 121/151 (80%) Strand = Plus / Plus Query: 122 accacatggggatcggccccgtgctccgtcagtgccgtgagctgttcgaggggcttgagt 181 |||||||||||||||||| | |||||| || |||| | ||||||||||||| |||| Sbjct: 644 accacatggggatcggcctggcgctccgcgagagccgccgggtgttcgaggggctggagt 703 Query: 182 ctctcaccgactgcggcggtggtgatggcacgacggcgaggtccatcgtcgaggcctacc 241 | || |||||||||||| || || ||| || |||||||| |||||||| ||| | || Sbjct: 704 cgctggtcgactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcc 763 Query: 242 cgcacatcaactgcaccgtgctcgaccttcc 272 || ||||| ||||||||||| |||||||| Sbjct: 764 cgggaatcaagtgcaccgtgctggaccttcc 794
>emb|BX052119.1|CNS09CDN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3AC10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 800 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 gccgtgccctcgccgttcgagg 31 |||||||||||||||||||||| Sbjct: 544 gccgtgccctcgccgttcgagg 523
>ref|XM_317180.2| Anopheles gambiae str. PEST ENSANGP00000018332 (ENSANGG00000015843), partial mRNA Length = 1431 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 gccgtgccctcgccgttcgagg 31 |||||||||||||||||||||| Sbjct: 335 gccgtgccctcgccgttcgagg 314
>ref|XM_474642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 870 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 399 cgacgaggattgcatcaagatcctc 423 ||||||||| ||||||||||||||| Sbjct: 591 cgacgaggactgcatcaagatcctc 615
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 acatggggatcggccccgtgc 145 ||||||||||||||||||||| Sbjct: 2118563 acatggggatcggccccgtgc 2118543
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 240 cccgcacatcaactgcaccgtgctcgaccttcc 272 |||||| ||||| ||||||||||| |||||||| Sbjct: 642 cccgcatatcaagtgcaccgtgctggaccttcc 674
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 cgacgaggattgcatcaagatcctc 423 ||||||||| ||||||||||||||| Sbjct: 131110 cgacgaggactgcatcaagatcctc 131086
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 cgacgaggattgcatcaagatcctc 423 ||||||||| ||||||||||||||| Sbjct: 5154837 cgacgaggactgcatcaagatcctc 5154813
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 cccgcacatcaactgcaccgtgctcgaccttcc 272 |||||| ||||| ||||||||||| |||||||| Sbjct: 16264616 cccgcatatcaagtgcaccgtgctggaccttcc 16264584 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 240 cccgcacatcaactgcaccgtgctcgaccttcc 272 |||||| ||||| ||||||||||| |||||||| Sbjct: 16220101 cccgcatatcaagtgcaccgtgctggaccttcc 16220133
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 24 gttcgaggacgtgcacggcgccgccatcttcgaggagagca 64 |||||||||||||||| |||| || ||||||| ||||||| Sbjct: 494 gttcgaggacgtgcacagcgcgtccctcttcgacgagagca 534
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 cccgcacatcaactgcaccgtgctcgaccttcc 272 |||||| ||||| ||||||||||| |||||||| Sbjct: 85054 cccgcatatcaagtgcaccgtgctggaccttcc 85022 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 240 cccgcacatcaactgcaccgtgctcgaccttcc 272 |||||| ||||| ||||||||||| |||||||| Sbjct: 40539 cccgcatatcaagtgcaccgtgctggaccttcc 40571
>ref|NM_195472.1| Oryza sativa (japonica cultivar-group) putative gag-pol polyprotein (OJ1004_F02.14), mRNA Length = 4017 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 1460 tgcacggcgccgccatcttc 1479
>ref|XM_467235.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1490 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cgaggacgtgcacggcgccg 46 |||||||||||||||||||| Sbjct: 915 cgaggacgtgcacggcgccg 896
>ref|XM_469628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 1076 tgcacggcgccgccatcttc 1095
>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02 map C8, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 65708 tgcacggcgccgccatcttc 65689
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gctcatccacgacgccgtcg 112 |||||||||||||||||||| Sbjct: 93853 gctcatccacgacgccgtcg 93872
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 29871758 tgcacggcgccgccatcttc 29871739
>emb|CR734585.3|CNS0GTL4 Tetraodon nigroviridis full-length cDNA Length = 953 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gccgtcgctgcccacgacca 125 |||||||||||||||||||| Sbjct: 199 gccgtcgctgcccacgacca 180
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 138848 tgcacggcgccgccatcttc 138867
>gb|DQ428476.1| Sorghum propinquum locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428473.1| Sorghum bicolor voucher PI267408 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428472.1| Sorghum bicolor voucher PI221607 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428471.1| Sorghum bicolor voucher PI152702 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428469.1| Sorghum bicolor voucher NSL87902b locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428468.1| Sorghum bicolor voucher NSL87902a locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428467.1| Sorghum bicolor voucher NSL87666 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428466.1| Sorghum bicolor voucher NSL77217 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428465.1| Sorghum bicolor voucher NSL77034 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428464.1| Sorghum bicolor voucher NSL56174 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428463.1| Sorghum bicolor voucher NSL56003 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428462.1| Sorghum bicolor voucher NSL55243 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428461.1| Sorghum bicolor voucher NSL51365 locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|DQ428460.1| Sorghum bicolor voucher NSL51030b locus PRC1113 genomic sequence Length = 666 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 224 ccatcgtcgaggcctacccgcacatcaactgcaccgtgct 263 |||| ||| |||||||||||||||| || ||||| ||||| Sbjct: 168 ccattgtccaggcctacccgcacataaaatgcactgtgct 207
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 34448 tgcacggcgccgccatcttc 34429
>gb|AC011709.11| Homo sapiens chromosome 18, clone RP11-500H12, complete sequence Length = 193321 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 aaggtcatggacaaagttcttcct 297 |||||||||||||||||| ||||| Sbjct: 25087 aaggtcatggacaaagtttttcct 25110
>emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 in linkage group 14, complete sequence Length = 198761 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ttgttctgcacttctggagc 399 |||||||||||||||||||| Sbjct: 96200 ttgttctgcacttctggagc 96219
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 37699 tgcacggcgccgccatcttc 37680
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 7209090 tgcacggcgccgccatcttc 7209071
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 29963180 tgcacggcgccgccatcttc 29963161
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cgaggacgtgcacggcgccg 46 |||||||||||||||||||| Sbjct: 28371459 cgaggacgtgcacggcgccg 28371440
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 catggggatcggccccgtgc 145 |||||||||||||||||||| Sbjct: 2427713 catggggatcggccccgtgc 2427732
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cctcgccgttcgaggacgtg 36 |||||||||||||||||||| Sbjct: 2517796 cctcgccgttcgaggacgtg 2517815
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 catggggatcggccccgtgc 145 |||||||||||||||||||| Sbjct: 932160 catggggatcggccccgtgc 932179
>gb|AY753305.1| Trametes ochracea pyranose 2-oxidase (p2o) gene, complete cds Length = 4459 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gatggcacgacggcgaggtc 224 |||||||||||||||||||| Sbjct: 4251 gatggcacgacggcgaggtc 4232
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cgaggacgtgcacggcgccg 46 |||||||||||||||||||| Sbjct: 163216 cgaggacgtgcacggcgccg 163197
>dbj|AK110831.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A04, full insert sequence Length = 1489 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cgaggacgtgcacggcgccg 46 |||||||||||||||||||| Sbjct: 915 cgaggacgtgcacggcgccg 896
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tgcacggcgccgccatcttc 54 |||||||||||||||||||| Sbjct: 7212386 tgcacggcgccgccatcttc 7212367
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 catggggatcggccccgtgc 145 |||||||||||||||||||| Sbjct: 606858 catggggatcggccccgtgc 606877 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,517,952 Number of Sequences: 3902068 Number of extensions: 2517952 Number of successful extensions: 47970 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47247 Number of HSP's gapped (non-prelim): 714 length of query: 428 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 406 effective length of database: 17,147,199,772 effective search space: 6961763107432 effective search space used: 6961763107432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
