ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet94d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465257.1| Oryza sativa (japonica cultivar-group), mRNA 309 4e-81
2dbj|AK061254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 4e-81
3gb|BT016177.1| Zea mays clone Contig10 mRNA sequence 293 2e-76
4dbj|AB040667.1| Zea mays copz2 mRNA for nonclathrin coat protein... 293 2e-76
5gb|AY104496.1| Zea mays PCO084558 mRNA sequence 285 6e-74
6dbj|AB040041.1| Oryza sativa copz2 mRNA for nonclathrin coat pro... 216 5e-53
7dbj|AK073474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
9dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
10dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
11dbj|AB040043.1| Lycopersicon esculentum copz2 mRNA for nonclathr... 82 2e-12
12emb|AJ866986.1| Medicago truncatula mRNA for coatomer zeta1 subu... 80 7e-12
13gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
15ref|XM_475371.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
16dbj|AK104166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
17dbj|AK099044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
18dbj|AK066739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
19dbj|AK059189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
20dbj|AB042259.1| Oryza sativa (japonica cultivar-group) copz1 mRN... 62 2e-06
21dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone... 60 6e-06
22gb|BT014597.1| Lycopersicon esculentum clone 134072F, mRNA sequence 56 1e-04
23dbj|AB040543.1| Glycine max copz2 mRNA for nonclathrin coat prot... 52 0.002
24gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete seq... 48 0.024
25emb|AJ866987.1| Medicago truncatula mRNA for coatomer zeta2 subu... 48 0.024
26dbj|AB040040.1| Glycine max copz1 mRNA for nonclathrin coat prot... 48 0.024
27ref|NM_116921.2| Arabidopsis thaliana unknown protein AT4G08520 ... 46 0.097
28gb|AY150422.1| Arabidopsis thaliana putative coatomer protein (A... 46 0.097
29gb|AY074506.1| Arabidopsis thaliana putative coatomer protein (A... 46 0.097
30gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 42 1.5
31ref|XM_953540.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
32ref|XM_325834.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
33emb|AL662880.6| Zebrafish DNA sequence from clone BUSM1-182N13 i... 42 1.5
34gb|AE009499.1| Brucella melitensis 16M chromosome I, section 56 ... 42 1.5
35gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 42 1.5
36emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 42 1.5
37gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete seq... 40 6.0
38gb|AY052369.1| Homo sapiens PP2A B56 gamma gene, complete cds, a... 40 6.0
39gb|AE008422.1|AE008422 Streptococcus pneumoniae R6 section 38 of... 40 6.0
40dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
41gb|AC025181.8| Homo sapiens chromosome 5 clone CTD-2186M15, comp... 40 6.0
42dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
43gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 40 6.0
44gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 6.0
45gb|AY105099.1| Zea mays PCO093572 mRNA sequence 40 6.0
46emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2... 40 6.0
47gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 6.0
48emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on ch... 40 6.0 
>ref|XM_465257.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 961

 Score =  309 bits (156), Expect = 4e-81
 Identities = 260/295 (88%)
 Strand = Plus / Plus

                                                                       
Query: 148 aggaggccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctac 207
           ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 207 aggaggccatgggagaattctccaaggaatcttgcccttctgtgaagaacattttgcttc 266

                                                                       
Query: 208 tggattctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacg 267
           |||||||||| || || || ||||| ||||| |||||||||||||||||| | |  || |
Sbjct: 267 tggattctgaagggaaacgtgttgccgtgaaatacttctcggatgattggtctagtaatg 326

                                                                       
Query: 268 catctaggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgct 327
           | || | |||| |||||||||||||  | |||||||||||||||||||||||||||||||
Sbjct: 327 cgtcaaagttggcctttgaaaagtctgtctttactaaaactctgaagacaaatgcacgct 386

                                                                       
Query: 328 cagaagctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagacc 387
           |||||||||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||
Sbjct: 387 cagaagctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagacc 446

                                                                  
Query: 388 ttcacttcttcgtcactgccggagatgatgagaatgagctaatcatagcanatgt 442
           |||| || || ||||| || || ||||||||||||||||| || |||||| ||||
Sbjct: 447 ttcatttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgt 501
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>dbj|AK061254.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A06, full
           insert sequence
          Length = 961

 Score =  309 bits (156), Expect = 4e-81
 Identities = 260/295 (88%)
 Strand = Plus / Plus

                                                                       
Query: 148 aggaggccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctac 207
           ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 207 aggaggccatgggagaattctccaaggaatcttgcccttctgtgaagaacattttgcttc 266

                                                                       
Query: 208 tggattctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacg 267
           |||||||||| || || || ||||| ||||| |||||||||||||||||| | |  || |
Sbjct: 267 tggattctgaagggaaacgtgttgccgtgaaatacttctcggatgattggtctagtaatg 326

                                                                       
Query: 268 catctaggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgct 327
           | || | |||| |||||||||||||  | |||||||||||||||||||||||||||||||
Sbjct: 327 cgtcaaagttggcctttgaaaagtctgtctttactaaaactctgaagacaaatgcacgct 386

                                                                       
Query: 328 cagaagctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagacc 387
           |||||||||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||
Sbjct: 387 cagaagctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagacc 446

                                                                  
Query: 388 ttcacttcttcgtcactgccggagatgatgagaatgagctaatcatagcanatgt 442
           |||| || || ||||| || || ||||||||||||||||| || |||||| ||||
Sbjct: 447 ttcatttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgt 501
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>gb|BT016177.1| Zea mays clone Contig10 mRNA sequence
          Length = 1102

 Score =  293 bits (148), Expect = 2e-76
 Identities = 250/284 (88%)
 Strand = Plus / Plus

                                                                       
Query: 154 ccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctactggatt 213
           |||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct: 198 ccatggcggatttctccaaggaatcttgcccttctgtgaagaacattttacttctggatt 257

                                                                       
Query: 214 ctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacgcatcta 273
           |||| |||||||| |||||||| ||||| ||||| |||||||||||||  || ||||| |
Sbjct: 258 ctgaaggaaagcgtgttgctgtaaagtatttctcagatgattggccgactaatgcatcaa 317

                                                                       
Query: 274 ggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgctcagaag 333
            |||  |||  ||||||||  |||||||||||||||| ||||||||||||||  ||||||
Sbjct: 318 agttagcctacgaaaagtctgtttttactaaaactctaaagacaaatgcacggacagaag 377

                                                                       
Query: 334 ctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttcact 393
           |||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct: 378 ctgagataacattgtttgatggttatattgtcgtttacaagtttgtacatgaccttcact 437

                                                       
Query: 394 tcttcgtcactgccggagatgatgagaatgagctaatcatagca 437
           | || ||||| || |||||||||||||||||||| ||| |||||
Sbjct: 438 tttttgtcaccgctggagatgatgagaatgagctcatcttagca 481
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>dbj|AB040667.1| Zea mays copz2 mRNA for nonclathrin coat protein zeta2-COP,
           complete cds
          Length = 910

 Score =  293 bits (148), Expect = 2e-76
 Identities = 250/284 (88%)
 Strand = Plus / Plus

                                                                       
Query: 154 ccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctactggatt 213
           |||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct: 55  ccatggcggatttctccaaggaatcttgcccttctgtgaagaacattttacttctggatt 114

                                                                       
Query: 214 ctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacgcatcta 273
           |||| |||||||| |||||||| ||||| ||||| |||||||||||||  || ||||| |
Sbjct: 115 ctgaaggaaagcgtgttgctgtaaagtatttctcagatgattggccgactaatgcatcaa 174

                                                                       
Query: 274 ggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgctcagaag 333
            |||  |||  ||||||||  |||||||||||||||| ||||||||||||||  ||||||
Sbjct: 175 agttagcctacgaaaagtctgtttttactaaaactctaaagacaaatgcacggacagaag 234

                                                                       
Query: 334 ctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttcact 393
           |||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct: 235 ctgagataacattgtttgatggttatattgtcgtttacaagtttgtacatgaccttcact 294

                                                       
Query: 394 tcttcgtcactgccggagatgatgagaatgagctaatcatagca 437
           | || ||||| || |||||||||||||||||||| ||| |||||
Sbjct: 295 tttttgtcaccgctggagatgatgagaatgagctcatcttagca 338
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>gb|AY104496.1| Zea mays PCO084558 mRNA sequence
          Length = 1023

 Score =  285 bits (144), Expect = 6e-74
 Identities = 249/284 (87%)
 Strand = Plus / Plus

                                                                       
Query: 154 ccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctactggatt 213
           |||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct: 231 ccatggcggatttctccaaggaatcttgcccttctgtgaagaacattttacttctggatt 290

                                                                       
Query: 214 ctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacgcatcta 273
           |||| |||||||| |||||||| ||||| ||||| |||||||||| ||  || ||||| |
Sbjct: 291 ctgaaggaaagcgtgttgctgtaaagtatttctcagatgattggctgactaatgcatcaa 350

                                                                       
Query: 274 ggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgctcagaag 333
            |||  |||  ||||||||  |||||||||||||||| ||||||||||||||  ||||||
Sbjct: 351 agttagcctacgaaaagtctgtttttactaaaactctaaagacaaatgcacggacagaag 410

                                                                       
Query: 334 ctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttcact 393
           |||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct: 411 ctgagataacattgtttgatggttatattgtcgtttacaagtttgtacatgaccttcact 470

                                                       
Query: 394 tcttcgtcactgccggagatgatgagaatgagctaatcatagca 437
           | || ||||| || |||||||||||||||||||| ||| |||||
Sbjct: 471 tttttgtcaccgctggagatgatgagaatgagctcatcttagca 514
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>dbj|AB040041.1| Oryza sativa copz2 mRNA for nonclathrin coat protein zeta2-COP,
           partial cds
          Length = 659

 Score =  216 bits (109), Expect = 5e-53
 Identities = 204/236 (86%)
 Strand = Plus / Plus

                                                                       
Query: 207 ctggattctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaac 266
           ||||||||||| || || || ||||| ||||| |||||||||||||||||| | |  || 
Sbjct: 1   ctggattctgaagggaaacgtgttgccgtgaaatacttctcggatgattggtctagtaat 60

                                                                       
Query: 267 gcatctaggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgc 326
           || || | |||| |||||||||||||  | ||||||||||||||||||||||||||||||
Sbjct: 61  gcgtcaaagttggcctttgaaaagtctgtctttactaaaactctgaagacaaatgcacgc 120

                                                                       
Query: 327 tcagaagctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagac 386
           ||||||||||||||||||||| |||||||  ||||||| ||||| |||||||||||||||
Sbjct: 121 tcagaagctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagac 180

                                                                   
Query: 387 cttcacttcttcgtcactgccggagatgatgagaatgagctaatcatagcanatgt 442
           ||||| || || ||||| || || ||||||||||||||||| || |||||| ||||
Sbjct: 181 cttcatttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgt 236
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>dbj|AK073474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045O22, full
           insert sequence
          Length = 1196

 Score =  202 bits (102), Expect = 7e-49
 Identities = 165/186 (88%)
 Strand = Plus / Plus

                                                                       
Query: 148 aggaggccatgggggaattctccaaggaatcttgcccgtctgtgaagaacattttgctac 207
           ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 208 aggaggccatgggagaattctccaaggaatcttgcccttctgtgaagaacattttgcttc 267

                                                                       
Query: 208 tggattctgagggaaagcgcgttgctgtgaagtacttctcggatgattggccgaacaacg 267
           |||||||||| || || || ||||| ||||| |||||||||||||||||| | |  || |
Sbjct: 268 tggattctgaagggaaacgtgttgccgtgaaatacttctcggatgattggtctagtaatg 327

                                                                       
Query: 268 catctaggttgacctttgaaaagtccatttttactaaaactctgaagacaaatgcacgct 327
           | || | |||| |||||||||||||  | |||||||||||||||||||||||||||||||
Sbjct: 328 cgtcaaagttggcctttgaaaagtctgtctttactaaaactctgaagacaaatgcacgct 387

                 
Query: 328 cagaag 333
           ||||||
Sbjct: 388 cagaag 393
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  163 bits (82), Expect = 6e-37
 Identities = 142/162 (87%)
 Strand = Plus / Plus

                                                                            
Query: 172      aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 231
                ||||||||||||| |||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 12609385 aggaatcttgcccttctgtgaagaacattttgcttctggattctgaagggaaacgtgttg 12609444

                                                                            
Query: 232      ctgtgaagtacttctcggatgattggccgaacaacgcatctaggttgacctttgaaaagt 291
                | ||||| |||||||||||||||||| | |  || || || | |||| ||||||||||||
Sbjct: 12609445 ccgtgaaatacttctcggatgattggtctagtaatgcgtcaaagttggcctttgaaaagt 12609504

                                                          
Query: 292      ccatttttactaaaactctgaagacaaatgcacgctcagaag 333
                |  | |||||||||||||||||||||||||||||||||||||
Sbjct: 12609505 ctgtctttactaaaactctgaagacaaatgcacgctcagaag 12609546



 Score =  111 bits (56), Expect = 2e-21
 Identities = 97/111 (87%)
 Strand = Plus / Plus

                                                                            
Query: 332      agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 391
                |||||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||||||
Sbjct: 12610370 agctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagaccttca 12610429

                                                                   
Query: 392      cttcttcgtcactgccggagatgatgagaatgagctaatcatagcanatgt 442
                 || || ||||| || || ||||||||||||||||| || |||||| ||||
Sbjct: 12610430 tttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgt 12610480



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 148      aggaggccatgggggaattctccaagg 174
                ||||||||||||| |||||||||||||
Sbjct: 12608725 aggaggccatgggagaattctccaagg 12608751
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>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1134_B09
          Length = 105247

 Score =  163 bits (82), Expect = 6e-37
 Identities = 142/162 (87%)
 Strand = Plus / Plus

                                                                        
Query: 172  aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 231
            ||||||||||||| |||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 6444 aggaatcttgcccttctgtgaagaacattttgcttctggattctgaagggaaacgtgttg 6503

                                                                        
Query: 232  ctgtgaagtacttctcggatgattggccgaacaacgcatctaggttgacctttgaaaagt 291
            | ||||| |||||||||||||||||| | |  || || || | |||| ||||||||||||
Sbjct: 6504 ccgtgaaatacttctcggatgattggtctagtaatgcgtcaaagttggcctttgaaaagt 6563

                                                      
Query: 292  ccatttttactaaaactctgaagacaaatgcacgctcagaag 333
            |  | |||||||||||||||||||||||||||||||||||||
Sbjct: 6564 ctgtctttactaaaactctgaagacaaatgcacgctcagaag 6605



 Score =  111 bits (56), Expect = 2e-21
 Identities = 97/111 (87%)
 Strand = Plus / Plus

                                                                        
Query: 332  agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 391
            |||||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||||||
Sbjct: 7429 agctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagaccttca 7488

                                                               
Query: 392  cttcttcgtcactgccggagatgatgagaatgagctaatcatagcanatgt 442
             || || ||||| || || ||||||||||||||||| || |||||| ||||
Sbjct: 7489 tttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgt 7539



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 148  aggaggccatgggggaattctccaagg 174
            ||||||||||||| |||||||||||||
Sbjct: 5784 aggaggccatgggagaattctccaagg 5810
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>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0572D06
          Length = 148920

 Score =  163 bits (82), Expect = 6e-37
 Identities = 142/162 (87%)
 Strand = Plus / Plus

                                                                          
Query: 172    aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 231
              ||||||||||||| |||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 113918 aggaatcttgcccttctgtgaagaacattttgcttctggattctgaagggaaacgtgttg 113977

                                                                          
Query: 232    ctgtgaagtacttctcggatgattggccgaacaacgcatctaggttgacctttgaaaagt 291
              | ||||| |||||||||||||||||| | |  || || || | |||| ||||||||||||
Sbjct: 113978 ccgtgaaatacttctcggatgattggtctagtaatgcgtcaaagttggcctttgaaaagt 114037

                                                        
Query: 292    ccatttttactaaaactctgaagacaaatgcacgctcagaag 333
              |  | |||||||||||||||||||||||||||||||||||||
Sbjct: 114038 ctgtctttactaaaactctgaagacaaatgcacgctcagaag 114079



 Score =  111 bits (56), Expect = 2e-21
 Identities = 97/111 (87%)
 Strand = Plus / Plus

                                                                          
Query: 332    agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 391
              |||||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||||||
Sbjct: 114903 agctgagataacattgtttgatggctatattgtcgtttataagtttgtacaagaccttca 114962

                                                                 
Query: 392    cttcttcgtcactgccggagatgatgagaatgagctaatcatagcanatgt 442
               || || ||||| || || ||||||||||||||||| || |||||| ||||
Sbjct: 114963 tttttttgtcaccgctggtgatgatgagaatgagctcattatagcaaatgt 115013



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 148    aggaggccatgggggaattctccaagg 174
              ||||||||||||| |||||||||||||
Sbjct: 113258 aggaggccatgggagaattctccaagg 113284
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>dbj|AB040043.1| Lycopersicon esculentum copz2 mRNA for nonclathrin coat protein
           zeta2-COP, complete cds
          Length = 862

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 282 tttgaaaagtccatttttactaaaactctgaagacaaatgcacgctcagaagctgagata 341
           ||||| ||||| |||||||| || |||| |||||||||||| ||  | ||||||||||||
Sbjct: 187 tttgagaagtcaatttttaccaagactcagaagacaaatgctcgaactgaagctgagata 246

                                                                
Query: 342 acattgcttgatggtaatattgttgtttacaagtttgtacaagaccttcactt 394
            || || ||||  |||| |||||||| || |||||||| ||||||||||||||
Sbjct: 247 gcaatgtttgacagtaacattgttgtctataagtttgtgcaagaccttcactt 299
to top
>emb|AJ866986.1| Medicago truncatula mRNA for coatomer zeta1 subunit (copz1 gene)
          Length = 543

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                       
Query: 312 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 371
           ||||||||||| ||  ||||||||||||||||| |||||||    ||||| |||||||||
Sbjct: 151 aagacaaatgcgcggacagaagctgagataacactgcttgagaacaatatcgttgtttac 210

                                                                   
Query: 372 aagtttgtacaagaccttcacttcttcgtcactgccggagatgatgagaatgagct 427
           || ||||| |||||| | || ||||| |||||||  || |||||||| ||||||||
Sbjct: 211 aaatttgtgcaagacttgcatttctttgtcactggtggtgatgatgaaaatgagct 266
to top
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                         
Query: 172   aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 231
             ||||||| ||||| || |||||||||||  | || |||||||| ||||| |||||||| |
Sbjct: 88180 aggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcg 88121

                                         
Query: 232   ctgtgaagtacttctcggatgattggcc 259
             | || ||||||| | |||||||||||||
Sbjct: 88120 ccgtcaagtactacacggatgattggcc 88093
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                            
Query: 172      aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 231
                ||||||| ||||| || |||||||||||  | || |||||||| ||||| |||||||| |
Sbjct: 22498773 aggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcg 22498714

                                            
Query: 232      ctgtgaagtacttctcggatgattggcc 259
                | || ||||||| | |||||||||||||
Sbjct: 22498713 ccgtcaagtactacacggatgattggcc 22498686
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>ref|XM_475371.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 534

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 173 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 232
           |||||| ||||| || |||||||||||  | || |||||||| ||||| |||||||| ||
Sbjct: 3   ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 62

                                      
Query: 233 tgtgaagtacttctcggatgattggcc 259
            || ||||||| | |||||||||||||
Sbjct: 63  cgtcaagtactacacggatgattggcc 89
to top
>dbj|AK104166.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D02, full
           insert sequence
          Length = 925

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 173 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 232
           |||||| ||||| || |||||||||||  | || |||||||| ||||| |||||||| ||
Sbjct: 96  ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 155

                                      
Query: 233 tgtgaagtacttctcggatgattggcc 259
            || ||||||| | |||||||||||||
Sbjct: 156 cgtcaagtactacacggatgattggcc 182
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>dbj|AK099044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145O08, full
           insert sequence
          Length = 969

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 173 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 232
           |||||| ||||| || |||||||||||  | || |||||||| ||||| |||||||| ||
Sbjct: 116 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 175

                                      
Query: 233 tgtgaagtacttctcggatgattggcc 259
            || ||||||| | |||||||||||||
Sbjct: 176 cgtcaagtactacacggatgattggcc 202
to top
>dbj|AK066739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079J15, full
           insert sequence
          Length = 997

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 173 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 232
           |||||| ||||| || |||||||||||  | || |||||||| ||||| |||||||| ||
Sbjct: 181 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 240

                                      
Query: 233 tgtgaagtacttctcggatgattggcc 259
            || ||||||| | |||||||||||||
Sbjct: 241 cgtcaagtactacacggatgattggcc 267
to top
>dbj|AK059189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H02, full
           insert sequence
          Length = 889

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 173 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 232
           |||||| ||||| || |||||||||||  | || |||||||| ||||| |||||||| ||
Sbjct: 120 ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 179

                                      
Query: 233 tgtgaagtacttctcggatgattggcc 259
            || ||||||| | |||||||||||||
Sbjct: 180 cgtcaagtactacacggatgattggcc 206
to top
>dbj|AB042259.1| Oryza sativa (japonica cultivar-group) copz1 mRNA for zeta1-COP,
           complete cds
          Length = 807

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 173 ggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgc 232
           |||||| ||||| || |||||||||||  | || |||||||| ||||| |||||||| ||
Sbjct: 73  ggaatcctgcccttcggtgaagaacatccttctgctggattccgaggggaagcgcgtcgc 132

                                      
Query: 233 tgtgaagtacttctcggatgattggcc 259
            || ||||||| | |||||||||||||
Sbjct: 133 cgtcaagtactacacggatgattggcc 159
to top
>dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT12N11, TM0066,
            complete sequence
          Length = 79585

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 360  attgttgtttacaagtttgtacaagaccttcacttctt 397
            |||||||||||||||||||| ||||| |||||||||||
Sbjct: 7512 attgttgtttacaagtttgtccaagatcttcacttctt 7475
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>gb|BT014597.1| Lycopersicon esculentum clone 134072F, mRNA sequence
          Length = 759

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 192 aagaacattttgctactggattctgagggaaagcgcgttgctgtgaagtacttctcggat 251
           ||||||||| |||| || ||||| || |||||||| |||||||| || |||| ||| |||
Sbjct: 127 aagaacattctgcttctagattccgaaggaaagcgtgttgctgtaaactactactcagat 186

                   
Query: 252 gattggcc 259
           ||||||||
Sbjct: 187 gattggcc 194



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 312 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 371
           |||||||||||  |  ||||||| ||||| ||| || |||||  | |||||||||| |||
Sbjct: 247 aagacaaatgctagggcagaagcggagattacaatgtttgataattatattgttgtctac 306

                                     
Query: 372 aagtttgtacaagaccttcacttctt 397
           |||||||  ||||| ||||| |||||
Sbjct: 307 aagtttgctcaagatcttcatttctt 332
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>dbj|AB040543.1| Glycine max copz2 mRNA for nonclathrin coat protein zeta2-COP,
           complete cds
          Length = 833

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 360 attgttgtttacaagtttgtacaagaccttcacttctt 397
           |||||| ||||||||||||| ||||| |||||||||||
Sbjct: 201 attgttctttacaagtttgtccaagatcttcacttctt 238
to top
>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence
          Length = 144042

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 366   gtttacaagtttgtacaagaccttcacttctt 397
             |||||||||||||| ||||| |||||||||||
Sbjct: 98900 gtttacaagtttgtccaagatcttcacttctt 98931
to top
>emb|AJ866987.1| Medicago truncatula mRNA for coatomer zeta2 subunit (copz2 gene)
          Length = 549

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 366 gtttacaagtttgtacaagaccttcacttctt 397
           |||||||||||||| ||||| |||||||||||
Sbjct: 211 gtttacaagtttgtccaagatcttcacttctt 242
to top
>dbj|AB040040.1| Glycine max copz1 mRNA for nonclathrin coat protein zeta1-COP,
           complete cds
          Length = 820

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                       
Query: 312 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 371
           ||||||||||| ||  ||||||||||| ||||| | |||||    |||||  || |||||
Sbjct: 191 aagacaaatgctcgtacagaagctgaggtaacactacttgagaacaatatcattatttac 250

                                                                   
Query: 372 aagtttgtacaagaccttcacttcttcgtcactgccggagatgatgagaatgagct 427
           || |||||||||||||| || || || |||||||  || || ||||| ||||||||
Sbjct: 251 aaatttgtacaagacctgcatttttttgtcactggtggtgaagatgaaaatgagct 306
to top
>ref|NM_116921.2| Arabidopsis thaliana unknown protein AT4G08520 mRNA, complete cds
          Length = 836

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 312 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 371
           ||||| ||||| ||| ||||||||||||| ||| || | ||  ||||||||||||| || 
Sbjct: 214 aagaccaatgctcgcacagaagctgagatcacactgttggagagtaatattgttgtctat 273

                  
Query: 372 aagtttg 378
           |||||||
Sbjct: 274 aagtttg 280
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>gb|AY150422.1| Arabidopsis thaliana putative coatomer protein (At4g08520) mRNA,
           complete cds
          Length = 577

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 312 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 371
           ||||| ||||| ||| ||||||||||||| ||| || | ||  ||||||||||||| || 
Sbjct: 154 aagaccaatgctcgcacagaagctgagatcacactgttggagagtaatattgttgtctat 213

                  
Query: 372 aagtttg 378
           |||||||
Sbjct: 214 aagtttg 220
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>gb|AY074506.1| Arabidopsis thaliana putative coatomer protein (At4g08520) mRNA,
           complete cds
          Length = 844

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 312 aagacaaatgcacgctcagaagctgagataacattgcttgatggtaatattgttgtttac 371
           ||||| ||||| ||| ||||||||||||| ||| || | ||  ||||||||||||| || 
Sbjct: 206 aagaccaatgctcgcacagaagctgagatcacactgttggagagtaatattgttgtctat 265

                  
Query: 372 aagtttg 378
           |||||||
Sbjct: 266 aagtttg 272
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 396     ttcgtcactgccggagatgat 416
               |||||||||||||||||||||
Sbjct: 1397945 ttcgtcactgccggagatgat 1397965
to top
>ref|XM_953540.1| Neurospora crassa OR74A hypothetical protein (NCU05980.1) partial
           mRNA
          Length = 1947

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 28  ctcgcgggcaccaacaaacca 48
           |||||||||||||||||||||
Sbjct: 300 ctcgcgggcaccaacaaacca 280
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>ref|XM_325834.1| Neurospora crassa OR74A hypothetical protein (NCU05980.1) partial
           mRNA
          Length = 1947

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 28  ctcgcgggcaccaacaaacca 48
           |||||||||||||||||||||
Sbjct: 300 ctcgcgggcaccaacaaacca 280
to top
>emb|AL662880.6| Zebrafish DNA sequence from clone BUSM1-182N13 in linkage group 23
             Contains a novel gene similar to PHLDA3, part of two novel
             genes, a gene for a novel troponin I, the tnnt2 gene for
             cardiac troponin T2 and three CpG islands, complete
             sequence
          Length = 103409

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 337   agataacattgcttgatggtaatattgtt 365
             |||||||||| ||||||||||||| ||||
Sbjct: 55942 agataacattacttgatggtaataatgtt 55970
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>gb|AE009499.1| Brucella melitensis 16M chromosome I, section 56 of 195 of the
            complete sequence
          Length = 10455

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 396  ttcgtcactgccggagatgat 416
            |||||||||||||||||||||
Sbjct: 1762 ttcgtcactgccggagatgat 1742
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 396     ttcgtcactgccggagatgat 416
               |||||||||||||||||||||
Sbjct: 1416028 ttcgtcactgccggagatgat 1416048
to top
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 396     ttcgtcactgccggagatgat 416
               |||||||||||||||||||||
Sbjct: 1413178 ttcgtcactgccggagatgat 1413198
to top
>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence
          Length = 108135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                         
Query: 332   agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 391
             ||||||||||||||| |||||    |||||  || ||||||| |||| ||||||||| ||
Sbjct: 15923 agctgagataacattacttgagaacaatatcattatttacaaatttgcacaagacctgca 15982

                         
Query: 392   cttcttcgtcac 403
              ||||| |||||
Sbjct: 15983 tttctttgtcac 15994
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>gb|AY052369.1| Homo sapiens PP2A B56 gamma gene, complete cds, alternative splice
            products
          Length = 121028

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 190  tgaagaacattttgctactggatt 213
            |||||||||||||||||| |||||
Sbjct: 5197 tgaagaacattttgctacaggatt 5220
to top
>gb|AE008422.1|AE008422 Streptococcus pneumoniae R6 section 38 of 184 of the complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   ccaacaaaccaaagcaaagc 57
            ||||||||||||||||||||
Sbjct: 6062 ccaacaaaccaaagcaaagc 6043
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                            
Query: 172      aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 231
                ||||||| || || || |||||||||||| |  | |||||||| || || |||||||| |
Sbjct: 35975288 aggaatcctgtccttcggtgaagaacattcttgtgctggattccgaagggaagcgcgtgg 35975347

                            
Query: 232      ctgtgaagtact 243
                | ||||||||||
Sbjct: 35975348 cggtgaagtact 35975359
to top
>gb|AC025181.8| Homo sapiens chromosome 5 clone CTD-2186M15, complete sequence
          Length = 96399

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 302   taaaactctgaagacaaatgcacg 325
             ||||||||| ||||||||||||||
Sbjct: 75770 taaaactcttaagacaaatgcacg 75747
to top
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D11
          Length = 138108

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                         
Query: 172   aggaatcttgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttg 231
             ||||||| || || || |||||||||||| |  | |||||||| || || |||||||| |
Sbjct: 73966 aggaatcctgtccttcggtgaagaacattcttgtgctggattccgaagggaagcgcgtgg 74025

                         
Query: 232   ctgtgaagtact 243
             | ||||||||||
Sbjct: 74026 cggtgaagtact 74037
to top
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     ccaacaaaccaaagcaaagc 57
              ||||||||||||||||||||
Sbjct: 458076 ccaacaaaccaaagcaaagc 458057
to top
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 286     aaaagtccatttttactaaa 305
               ||||||||||||||||||||
Sbjct: 1366653 aaaagtccatttttactaaa 1366634
to top
>gb|AY105099.1| Zea mays PCO093572 mRNA sequence
          Length = 1077

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 180 tgcccgtctgtgaagaacattttgctactggattctgagggaaagcgcgttgctgtgaag 239
           |||||||| |||||||||||  |  | ||||| || |||||||||||||| || || |||
Sbjct: 198 tgcccgtcggtgaagaacatcctcttgctggactcggagggaaagcgcgtcgccgtaaag 257

               
Query: 240 tact 243
           ||||
Sbjct: 258 tact 261
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>emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2017C7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 189116

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 190   tgaagaacattttgctactggatt 213
             |||||||||||||||||| |||||
Sbjct: 66463 tgaagaacattttgctacaggatt 66440
to top
>gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1p4, complete sequence
          Length = 124443

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 332   agctgagataacattgcttgatggtaatattgttgtttacaagtttgtacaagaccttca 391
             ||||||||||||||| |||||    |||||  || ||||||| |||| ||||||||| ||
Sbjct: 19782 agctgagataacattacttgagaacaatatcattatttacaaatttgcacaagacctgca 19723

                         
Query: 392   cttcttcgtcac 403
              ||||| |||||
Sbjct: 19722 tttctttgtcac 19711
to top
>emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on chromosome 2, complete
             sequence
          Length = 220495

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    gggcaccaacaaaccaaagcaaag 56
             ||||||||||||||||||| ||||
Sbjct: 10073 gggcaccaacaaaccaaagaaaag 10096


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,464,213
Number of Sequences: 3902068
Number of extensions: 4464213
Number of successful extensions: 119298
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 119086
Number of HSP's gapped (non-prelim): 202
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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