>ref|NM_186453.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3222

 Score =  192 bits (97), Expect = 6e-46
 Identities = 181/209 (86%)
 Strand = Plus / Plus

                                                                        
Query: 193  acaaagcttcccggccgaattcatcaaagaagaaaaccaagaaaggtggcttgtcattgt 252
            |||||||||||| ||| | ||| ||||||||||| |  | |||||||||||| || ||||
Sbjct: 2537 acaaagcttcccagccaacttcgtcaaagaagaagaataggaaaggtggcttatcgttgt 2596

                                                                        
Query: 253  ttttgagtggtgctcttgatgacaccccaaagctaagcatgcctactcctgttgttcctg 312
            || |||||||||||||||||||||||||||| | ||||  |||||| ||||||||  |||
Sbjct: 2597 ttctgagtggtgctcttgatgacaccccaaaaccaagcccgcctacccctgttgtgactg 2656

                                                                        
Query: 313  tgacaccaaagcaagagggacctgcctggggtggagctaagataatgaagggacctgctt 372
            | ||||||||||| || || |||||||||||||| |||||| |||  |||||| ||||||
Sbjct: 2657 tcacaccaaagcatgaaggtcctgcctggggtggtgctaaggtaacaaagggatctgctt 2716

                                         
Query: 373  cccttcgtgatattcaaagcgagcagagg 401
            ||||||| |||||||||||||||||||||
Sbjct: 2717 cccttcgagatattcaaagcgagcagagg 2745



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 11   gaaaatcaagcaggcagcacaatctgata 39
            ||||| ||||||||||||||| |||||||
Sbjct: 2340 gaaaaacaagcaggcagcacattctgata 2368

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  192 bits (97), Expect = 6e-46
 Identities = 181/209 (86%)
 Strand = Plus / Minus

                                                                           
Query: 193     acaaagcttcccggccgaattcatcaaagaagaaaaccaagaaaggtggcttgtcattgt 252
               |||||||||||| ||| | ||| ||||||||||| |  | |||||||||||| || ||||
Sbjct: 3525384 acaaagcttcccagccaacttcgtcaaagaagaagaataggaaaggtggcttatcgttgt 3525325

                                                                           
Query: 253     ttttgagtggtgctcttgatgacaccccaaagctaagcatgcctactcctgttgttcctg 312
               || |||||||||||||||||||||||||||| | ||||  |||||| ||||||||  |||
Sbjct: 3525324 ttctgagtggtgctcttgatgacaccccaaaaccaagcccgcctacccctgttgtgactg 3525265

                                                                           
Query: 313     tgacaccaaagcaagagggacctgcctggggtggagctaagataatgaagggacctgctt 372
               | ||||||||||| || || |||||||||||||| |||||| |||  |||||| ||||||
Sbjct: 3525264 tcacaccaaagcatgaaggtcctgcctggggtggtgctaaggtaacaaagggatctgctt 3525205

                                            
Query: 373     cccttcgtgatattcaaagcgagcagagg 401
               ||||||| |||||||||||||||||||||
Sbjct: 3525204 cccttcgagatattcaaagcgagcagagg 3525176



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 11      gaaaatcaagcaggcagcacaatctgata 39
               ||||| ||||||||||||||| |||||||
Sbjct: 3526356 gaaaaacaagcaggcagcacattctgata 3526328

>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0039H02
          Length = 169162

 Score =  192 bits (97), Expect = 6e-46
 Identities = 181/209 (86%)
 Strand = Plus / Minus

                                                                         
Query: 193   acaaagcttcccggccgaattcatcaaagaagaaaaccaagaaaggtggcttgtcattgt 252
             |||||||||||| ||| | ||| ||||||||||| |  | |||||||||||| || ||||
Sbjct: 63334 acaaagcttcccagccaacttcgtcaaagaagaagaataggaaaggtggcttatcgttgt 63275

                                                                         
Query: 253   ttttgagtggtgctcttgatgacaccccaaagctaagcatgcctactcctgttgttcctg 312
             || |||||||||||||||||||||||||||| | ||||  |||||| ||||||||  |||
Sbjct: 63274 ttctgagtggtgctcttgatgacaccccaaaaccaagcccgcctacccctgttgtgactg 63215

                                                                         
Query: 313   tgacaccaaagcaagagggacctgcctggggtggagctaagataatgaagggacctgctt 372
             | ||||||||||| || || |||||||||||||| |||||| |||  |||||| ||||||
Sbjct: 63214 tcacaccaaagcatgaaggtcctgcctggggtggtgctaaggtaacaaagggatctgctt 63155

                                          
Query: 373   cccttcgtgatattcaaagcgagcagagg 401
             ||||||| |||||||||||||||||||||
Sbjct: 63154 cccttcgagatattcaaagcgagcagagg 63126



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 11    gaaaatcaagcaggcagcacaatctgata 39
             ||||| ||||||||||||||| |||||||
Sbjct: 64306 gaaaaacaagcaggcagcacattctgata 64278

>gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosome 5, complete sequence
          Length = 194560

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   acacaaaagccatcttctgtc 183
             |||||||||||||||||||||
Sbjct: 80533 acacaaaagccatcttctgtc 80513

>gb|AC104411.5| Homo sapiens 3 BAC RP11-555M1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70499

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   gatgacaccccaaagctaagc 290
             |||||||||||||||||||||
Sbjct: 64679 gatgacaccccaaagctaagc 64699

>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 115    cttcagaaaaggaaccagtcaaaccatct 143
              |||||| | ||||||||||||||||||||
Sbjct: 407619 cttcagtataggaaccagtcaaaccatct 407647

>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete
             sequence
          Length = 123655

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 250   tgtttttgagtggtgctcttgatga 274
             ||||| |||||||||||||||||||
Sbjct: 92123 tgtttctgagtggtgctcttgatga 92099

>gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome 5, complete sequence
          Length = 222180

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 163   acacaaaagccatcttctgtc 183
             |||||||||||||||||||||
Sbjct: 11505 acacaaaagccatcttctgtc 11525

>emb|CT573215.2| Medicago truncatula chromosome 5 clone mth2-51h23, COMPLETE SEQUENCE
          Length = 121342

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   atcaaagaagaaaaccaagaaaggt 239
             ||||||||||||||| |||||||||
Sbjct: 84135 atcaaagaagaaaacaaagaaaggt 84111

>ref|NM_113815.2| Arabidopsis thaliana unknown protein AT3G28940 mRNA, complete cds
          Length = 771

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gcttgtcattgtttttgagt 260
           ||||||||||||||||||||
Sbjct: 46  gcttgtcattgtttttgagt 27

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    aacacaaaagccatcttctg 181
              ||||||||||||||||||||
Sbjct: 566471 aacacaaaagccatcttctg 566490

>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
             sequence
          Length = 253151

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   caaagaagaaaaccaagaaa 236
             ||||||||||||||||||||
Sbjct: 94872 caaagaagaaaaccaagaaa 94891

>gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, complete sequence
          Length = 198154

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    gaattcatcaaagaagaaaa 228
              ||||||||||||||||||||
Sbjct: 174210 gaattcatcaaagaagaaaa 174229

>ref|XM_459107.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D15730g)
            partial mRNA
          Length = 2793

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 213  tcatcaaagaagaaaaccaagaaa 236
            |||||||||||||||| |||||||
Sbjct: 2728 tcatcaaagaagaaaaacaagaaa 2751

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     aacacaaaagccatcttctg 181
               ||||||||||||||||||||
Sbjct: 3244894 aacacaaaagccatcttctg 3244875

>gb|AC125151.4| Mus musculus BAC clone RP24-355K8 from chromosome 14, complete sequence
          Length = 202916

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     aaagcacaaggacaaggagcaaaa 73
              |||||||||||||||| |||||||
Sbjct: 102785 aaagcacaaggacaagaagcaaaa 102762

>gb|AC132581.4| Mus musculus BAC clone RP24-390D8 from chromosome 6, complete sequence
          Length = 172240

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      aagaaaatcaagcaggcagcacaa 32
              ||||||||||| ||||||||||||
Sbjct: 162071 aagaaaatcaaacaggcagcacaa 162048

>gb|AC125144.3| Mus musculus BAC clone RP24-346C2 from chromosome 6, complete sequence
          Length = 171156

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     aagaaaatcaagcaggcagcacaa 32
             ||||||||||| ||||||||||||
Sbjct: 58883 aagaaaatcaaacaggcagcacaa 58860

>emb|AJ967003.1| Sida yellow vein virus-associated DNA beta c1 gene
          Length = 1355

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 aagaagaaaaccaagaaagg 238
           ||||||||||||||||||||
Sbjct: 881 aagaagaaaaccaagaaagg 900

>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
               hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 213     tcatcaaagaagaaaaccaagaaa 236
               |||||||||||||||| |||||||
Sbjct: 1195972 tcatcaaagaagaaaaacaagaaa 1195949

>gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, complete sequence
          Length = 173368

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    gaattcatcaaagaagaaaa 228
              ||||||||||||||||||||
Sbjct: 173368 gaattcatcaaagaagaaaa 173349

>gb|AC021486.10| Homo sapiens chromosome , clone RP11-73I6, complete sequence
          Length = 144356

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    gaattcatcaaagaagaaaa 228
              ||||||||||||||||||||
Sbjct: 131717 gaattcatcaaagaagaaaa 131736

>emb|BX511271.14| Zebrafish DNA sequence from clone DKEY-237E17 in linkage group 17,
            complete sequence
          Length = 37992

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  aagaagaaaaccaagaaagg 238
            ||||||||||||||||||||
Sbjct: 7238 aagaagaaaaccaagaaagg 7257

>gb|AF410281.1|AF410281 Arabidopsis thaliana AT3g28940/K5K13_2 mRNA, complete cds
          Length = 758

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gcttgtcattgtttttgagt 260
           ||||||||||||||||||||
Sbjct: 45  gcttgtcattgtttttgagt 26

>gb|AC019239.5|AC019239 Homo sapiens chromosome 18, clone RP11-346H17, complete sequence
          Length = 165591

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    gaattcatcaaagaagaaaa 228
              ||||||||||||||||||||
Sbjct: 143940 gaattcatcaaagaagaaaa 143921

>gb|AY089173.1| Arabidopsis thaliana clone 5137 mRNA, complete sequence
          Length = 623

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gcttgtcattgtttttgagt 260
           ||||||||||||||||||||
Sbjct: 34  gcttgtcattgtttttgagt 15

>emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in linkage group 17,
              complete sequence
          Length = 193078

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    aagaagaaaaccaagaaagg 238
              ||||||||||||||||||||
Sbjct: 156044 aagaagaaaaccaagaaagg 156025

>dbj|AB025615.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K5K13
          Length = 83544

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   gcttgtcattgtttttgagt 260
             ||||||||||||||||||||
Sbjct: 18705 gcttgtcattgtttttgagt 18724

>gb|AC102139.5| Mus musculus chromosome 15, clone RP23-286F21, complete sequence
          Length = 152946

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    gaattcatcaaagaagaaaa 228
              ||||||||||||||||||||
Sbjct: 147829 gaattcatcaaagaagaaaa 147810

>emb|BX005276.7| Mouse DNA sequence from clone RP24-85M20 on chromosome 4, complete
             sequence
          Length = 54826

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 212   ttcatcaaagaagaaaaccaagaa 235
             ||||||||||||| ||||||||||
Sbjct: 41027 ttcatcaaagaaggaaaccaagaa 41050


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,739,625
Number of Sequences: 3902068
Number of extensions: 4739625
Number of successful extensions: 94171
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94062
Number of HSP's gapped (non-prelim): 109
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)