ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet94b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 145 4e-35
2CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 63 3e-10
3CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 62 7e-10
4CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 57 1e-08
5CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop... 50 3e-06
6CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch... 50 3e-06
7CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 47 1e-05
8CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 47 2e-05
9CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 46 4e-05
10CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 46 4e-05
11CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 45 7e-05
12CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 45 9e-05
13CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 44 1e-04
14LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 44 1e-04
15CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 44 1e-04
16CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 44 2e-04
17CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 44 2e-04
18CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 44 2e-04
19CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 43 3e-04
20CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 43 3e-04
21CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 43 3e-04
22CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 42 4e-04
23CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 42 6e-04
24CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 42 6e-04
25CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 42 6e-04
26CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 42 7e-04
27CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 42 7e-04
28CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 42 7e-04
29CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 42 7e-04
30CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 42 7e-04
31CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 42 7e-04
32CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 42 7e-04
33CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 42 7e-04
34CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 41 0.001
35CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 41 0.001
36CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 41 0.001
37CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 41 0.001
38LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 41 0.001
39CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 41 0.001
40CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 41 0.001
41CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 41 0.001
42CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 40 0.002
43CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 40 0.002
44CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 40 0.002
45CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 40 0.002
46CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 40 0.002
47CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 40 0.002
48CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 40 0.002
49CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 40 0.002
50CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 40 0.002
51CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 40 0.002
52CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 40 0.002
53CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 40 0.003
54CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 40 0.003
55CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 40 0.003
56CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 39 0.004
57CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 39 0.004
58CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 39 0.005
59CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 39 0.005
60FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ... 39 0.005
61CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 39 0.005
62CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 39 0.006
63CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 39 0.006
64CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 38 0.008
65CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 38 0.011
66CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 38 0.011
67CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 37 0.014
68CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 37 0.024
69CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 36 0.041
70CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type... 35 0.054
71CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 35 0.070
72CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII typ... 34 0.12
73MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial p... 32 0.59
74CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 31 1.3
75GUC2D_HUMAN (Q02846) Retinal guanylyl cyclase 1 precursor (EC 4.... 30 1.7
76GUC2D_CANFA (O19179) Retinal guanylyl cyclase 1 precursor (EC 4.... 30 2.3
77NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor (Na(+)/Ca... 30 2.3
78AROC_METKA (Q8TXN1) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 30 2.3
79SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Gl... 29 3.8
80NAC3_HUMAN (P57103) Sodium/calcium exchanger 3 precursor (Na(+)/... 29 3.8
81GUC2D_BOVIN (P55203) Retinal guanylyl cyclase 1 precursor (EC 4.... 29 3.8
82GUC2E_RAT (P51840) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) ... 29 5.0
83GUC2E_MOUSE (P52785) Guanylyl cyclase GC-E precursor (EC 4.6.1.2... 29 5.0
84OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein CPn_1034/CP0... 29 5.0
85CBID_METCH (Q9X7G7) Putative cobalt-precorrin-6A synthase [deace... 28 6.6
86EDD_RHIME (Q9Z3S0) Phosphogluconate dehydratase (EC 4.2.1.12) (6... 28 6.6
87REP2_YEAST (P03872) Trans-acting factor C (REP2) (Protein charlie) 28 8.6 
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score =  145 bits (366), Expect = 4e-35
 Identities = 66/81 (81%), Positives = 72/81 (88%)
 Frame = +1

Query: 175 FVVRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWL 354
           FVVRA+S+PP KQ  NRQLWFASKQSL+YLDG LPGDFGFDPLGLSDPEGTGGFIEP+WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 355 AYGEIFNGRTAMMGVVGMIAP 417
           AYGE+ NGR AM+G  G IAP
Sbjct: 97  AYGEVINGRFAMLGAAGAIAP 117
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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +1

Query: 220 NRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMG 396
           +R LWF       +LDG+LPGDFGFDPLGL SDPE        +W A  E+ + R AM+G
Sbjct: 64  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLG 117

Query: 397 VVGMIAP 417
             G+  P
Sbjct: 118 AAGIFIP 124



 Score = 33.5 bits (75), Expect = 0.20
 Identities = 22/51 (43%), Positives = 27/51 (52%)
 Frame = +1

Query: 253 LTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LT  D   PG   FDPLG     G+G   + + L   EI NGR AM+ V+G
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMG 235
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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = +1

Query: 184 RASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAY 360
           R++++     + +R LWF       +LDG+LPGDFGFDPLGL SDPE        RW   
Sbjct: 52  RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQ 105

Query: 361 GEIFNGRTAMMGVVGMIAP 417
            E+ + R AM+G  G+  P
Sbjct: 106 AELVHCRWAMLGAAGIFIP 124



 Score = 33.5 bits (75), Expect = 0.20
 Identities = 22/51 (43%), Positives = 27/51 (52%)
 Frame = +1

Query: 253 LTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LT  D   PG   FDPLG     G+G   + + L   EI NGR AM+ V+G
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMG 235
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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +1

Query: 232 WFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGM 408
           W     S  YL G+L GD GFDPLGL+ DPE        +W    E+ NGR AM+GV GM
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGM 110

Query: 409 IAP 417
           + P
Sbjct: 111 LLP 113
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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = +1

Query: 259 YLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGM 408
           +LDG+LPGDFGFDPLGL  DP     F+  +W    E+ +GR AM+ V+G+
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMLAVLGI 119
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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
 Frame = +1

Query: 175 FVVRASSSPPAKQNDNRQLWFASKQS------LTYLDGTLPGDFGFDPLGL-SDPEGTGG 333
           FVV A++  P K       W  + +S        +LDG+LPGDFGFDPLGL  DP     
Sbjct: 42  FVVAAAAVAPKKS------WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDP----A 91

Query: 334 FIEPRWLAYGEIFNGRTAMMGVVGM 408
           F+  +W    E+ +GR AM  V+G+
Sbjct: 92  FL--KWYREAELIHGRWAMAAVLGI 114
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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = +1

Query: 259 YLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGM 408
           +LDG+LPGD+GFDPLGL  DP     F+  +W    E+ +GR AM  V+G+
Sbjct: 70  WLDGSLPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGI 114
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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S Q+ +YL+G  PGD+G+D  GLS DPE    F + R L   E+ +GR AM+G +G I P
Sbjct: 60  SAQTPSYLNGEFPGDYGWDTAGLSADPE---AFAKNRAL---EVIHGRWAMLGALGCIFP 113



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +1

Query: 277 PGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           PG   FDPLGL+D   T  F E   L   EI NGR AM  + G
Sbjct: 189 PGGQYFDPLGLADDPTT--FAE---LKVKEIKNGRLAMFSMFG 226
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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = +1

Query: 220 NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 318
           +R LWF   +S  YLDG+L GD+GFDP GL  P
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKP 83
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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S Q+ +YL+G  PGD+G+D  GLS DPE    F   R L   E+ +GR AM+G +G + P
Sbjct: 63  SAQTPSYLNGEFPGDYGWDTAGLSADPE---AFARNRAL---EVIHGRWAMLGALGCVFP 116



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +1

Query: 277 PGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           PG   FDPLGL+D   T  F E   L   EI NGR AM  + G
Sbjct: 192 PGGQYFDPLGLADDPVT--FAE---LKVKEIKNGRLAMFSMFG 229
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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           V +SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 5   VASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 60

Query: 358 YGEIFNGRTAMMGVVGMIAP 417
             E+ + R AM+G +G + P
Sbjct: 61  --EVIHSRWAMLGALGCVFP 78
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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +1

Query: 232 WFASKQSLTYLDGTLPGDFGFDPLGLSD-PEGTGGFIEPRWLAYGEIFNGRTAMMGVVGM 408
           W   +   +YLDG+ PGDFGFD LGL + P     + E       E+ + R AM+ V G+
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKE------SELIHCRWAMLAVPGI 102

Query: 409 IAP 417
           I P
Sbjct: 103 IVP 105
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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYG 363
           +SSSP    N  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L   
Sbjct: 46  SSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL--- 99

Query: 364 EIFNGRTAMMGVVGMIAP 417
           E+ + R AM+G +G + P
Sbjct: 100 EVIHCRWAMLGALGCVFP 117
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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +1

Query: 229 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LWF +  + ++L+G   GD GFDP GL +DP+          +   E+++GR AM+ VVG
Sbjct: 4   LWFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTF------ERMRIAEVYHGRLAMLAVVG 57

Query: 406 MIAP 417
            + P
Sbjct: 58  ALVP 61



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 229 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LWF + +    L G  P D GFDPL L +DP+     +  R +   E+F+GR AM+  VG
Sbjct: 189 LWFPNAEPPALLTGEYPADRGFDPLNLAADPD-----VYAR-MRVAEVFHGRLAMLCTVG 242

Query: 406 MIAP 417
            I P
Sbjct: 243 CIVP 246



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +1

Query: 217 DNRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMM 393
           + R+LWF +     YL G   GD GFDP GL +DP      +    +   E+F+ R +M+
Sbjct: 369 EERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADP------VTFERMQVAEVFHCRLSML 422

Query: 394 GVVGMIAP 417
            +VG + P
Sbjct: 423 ALVGCLVP 430
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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ +GR AM+G +G + P
Sbjct: 61  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHGRWAMLGALGCVFP 114
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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
 Frame = +1

Query: 184 RASSSPPAKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPEGTG 330
           R     P  +  +  +W+ S + L          +YL G  PGD+G+D  GLS DPE   
Sbjct: 33  RVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPE--- 89

Query: 331 GFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
            F + R L   E+ + R AM+G +G + P
Sbjct: 90  TFAKNREL---EVIHSRWAMLGALGCVTP 115
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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYG 363
           ASSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L   
Sbjct: 44  ASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL--- 97

Query: 364 EIFNGRTAMMGVVGMIAP 417
           E+ + R AM+G +G + P
Sbjct: 98  EVIHCRWAMLGALGCVFP 115
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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+Q+ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G I P
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCIFP 114
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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           V +S SP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 45  VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFSKNREL- 100

Query: 358 YGEIFNGRTAMMGVVGMIAP 417
             E+ + R AM+G +G + P
Sbjct: 101 --EVIHSRWAMLGALGCVFP 118
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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           V +S SP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 46  VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFSKNREL- 101

Query: 358 YGEIFNGRTAMMGVVGMIAP 417
             E+ + R AM+G +G + P
Sbjct: 102 --EVIHSRWAMLGALGCVFP 119
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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHSRWAMLGALGCVFP 113



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 22/48 (45%), Positives = 25/48 (52%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LD   PG   FDPLGL+D   T  F E   L   E+ NGR AM  + G
Sbjct: 183 LDKVYPGG-AFDPLGLADDPDT--FAE---LKVKELKNGRLAMFSMFG 224
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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           V AS SP    +  + L   S +  +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 39  VAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 94

Query: 358 YGEIFNGRTAMMGVVGMIAP 417
             E+ + R AM+G +G + P
Sbjct: 95  --EVIHSRWAMLGALGCVFP 112
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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = +1

Query: 190 SSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGE 366
           SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L   E
Sbjct: 47  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---E 100

Query: 367 IFNGRTAMMGVVGMIAP 417
           + + R AM+G +G + P
Sbjct: 101 VIHCRWAMLGALGCVFP 117
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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = +1

Query: 190 SSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGE 366
           SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L   E
Sbjct: 45  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---E 98

Query: 367 IFNGRTAMMGVVGMIAP 417
           + + R AM+G +G + P
Sbjct: 99  VIHCRWAMLGALGCVFP 115
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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+Q+ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 114
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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S +S +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHSRWAMLGALGCVFP 116
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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S +S +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHSRWAMLGALGCVFP 116
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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 115
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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 115
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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 115
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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+Q+ +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 34  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 87
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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +1

Query: 229 LWFASKQSLTYLDGTLPGDFGFDPLGLSDP 318
           LW  +     +LDG+LPGD GFDPLGLS P
Sbjct: 51  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKP 80
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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
 Frame = +1

Query: 205 AKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRW 351
           AKQ  +   W+ S + L          +YL G  PGD+G+D  GLS DPE    F + R 
Sbjct: 41  AKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNRE 97

Query: 352 LAYGEIFNGRTAMMGVVGMIAP 417
           L   E+ + R AM+G +G + P
Sbjct: 98  L---EVIHCRWAMLGALGCVFP 116
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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +1

Query: 220 NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 318
           +R LW+    S  +LDG+L GD+GFDP GL  P
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKP 86
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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117
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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117
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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117
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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 229 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           +WF   Q   +L G  P D GFDPL + +DP      +  R +   E+F+ R +M+ +VG
Sbjct: 161 VWFPGAQPPAHLTGEYPADRGFDPLSVAADPT-----VYAR-MRVSEVFHARLSMLAIVG 214

Query: 406 MIAP 417
            I P
Sbjct: 215 SIVP 218



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 364 EIFNGRTAMMGVVGMIAP 417
           E+FNGR AM+ +VG + P
Sbjct: 11  EVFNGRLAMLAIVGCVYP 28
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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 116
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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 116
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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 61  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 114
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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           AS+S       +R L+    S +  +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 51  ASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE---NFAKNREL- 106

Query: 358 YGEIFNGRTAMMGVVGMIAP 417
             E+ + R AM+G +G + P
Sbjct: 107 --EVIHCRWAMLGALGCVFP 124
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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           A+SS       +R L+    S +  +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 42  AASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 97

Query: 358 YGEIFNGRTAMMGVVGMIAP 417
             E+ + R AM+G +G + P
Sbjct: 98  --EVIHSRWAMLGALGCVFP 115
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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPEGT 327
           +R +++ P     +   W+ + + L          +YL G  PGD+G+D  GLS DPE  
Sbjct: 32  MRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-- 89

Query: 328 GGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
             F + R L   E+ + R AM+G +G + P
Sbjct: 90  -TFAKNREL---EVIHSRWAMLGALGCVFP 115
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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 57  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 105
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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 80  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 128
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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 80  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 128
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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 47  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 95
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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 65  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 113
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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 111
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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+Q  +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G   P
Sbjct: 62  SEQIPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHSRWAMLGALGCTFP 115



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LD   PG   FDPLGL+D   +  F E   L   E+ NGR AM  + G
Sbjct: 185 LDPLYPGG-AFDPLGLADDPDS--FAE---LKVKELKNGRLAMFSMFG 226
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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S Q  +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 62  SDQIPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 115
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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117
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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117
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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 116
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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +1

Query: 235 FASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMI 411
           F+   +  YL G  PGD+G+D  GLS DP+    + E       E+ + R A++G +G++
Sbjct: 45  FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREI------ELIHARWALLGALGIL 98

Query: 412 AP 417
            P
Sbjct: 99  TP 100



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 25/55 (45%), Positives = 28/55 (50%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           S+  L  LD   PG   FDPLGL+D   T  F E   L   EI NGR AM   +G
Sbjct: 166 SEGFLDDLDTLYPGG-PFDPLGLADDPDT--FAE---LKVKEIKNGRLAMFSCLG 214
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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +1

Query: 220 NRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +R  W    S  +  YL G  PGD+G+D  GLS DPE    + E       E+ + R A+
Sbjct: 43  DRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYREL------EVIHARWAL 96

Query: 391 MGVVGMIAP 417
           +G +G++ P
Sbjct: 97  LGALGILTP 105



 Score = 31.2 bits (69), Expect = 1.0
 Identities = 23/48 (47%), Positives = 25/48 (52%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR AM    G
Sbjct: 176 LDPLYPGE-SFDPLGLADDPDT--FAE---LKVKEIKNGRLAMFSCFG 217
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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYG 363
           +SSSP    +  + L   S ++ +YL G  P D+G+D  GLS DPE    F + R L   
Sbjct: 46  SSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPE---TFAKNREL--- 99

Query: 364 EIFNGRTAMMGVVGMIAP 417
           E+ + R AM+G +G + P
Sbjct: 100 EVIHCRWAMLGALGCVFP 117
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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 115
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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +1

Query: 265 DGTLPGDFGFDPLGL--SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIA 414
           +G  PGD GFDPLGL  SDP+      E R +   E+ +GR AM+   G +A
Sbjct: 145 EGYEPGDLGFDPLGLAPSDPD------EFRLMQEKELSHGRLAMIAAAGFLA 190
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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +1

Query: 220 NRQLW---FASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTA 387
           NR  W   ++   +  YL G  PGD+G+D  GLS DPE    + E       E+ + R A
Sbjct: 40  NRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARWA 93

Query: 388 MMGVVGMIAP 417
           M+G +G   P
Sbjct: 94  MLGALGCQTP 103



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 22/48 (45%), Positives = 25/48 (52%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR A   + G
Sbjct: 173 LDPLYPGE-SFDPLGLADDPDT--FAE---LKVKEIKNGRLASFSMFG 214
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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S ++ +YL+G   GD+G+D  GL SDPE    F   R L   E+ + R AM+G +G + P
Sbjct: 65  SGETPSYLNGEFAGDYGWDTAGLSSDPE---TFARNREL---EVIHARWAMLGALGCLTP 118



 Score = 29.3 bits (64), Expect = 3.8
 Identities = 22/47 (46%), Positives = 24/47 (51%)
 Frame = +1

Query: 265 DGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           D   PG   FDPLGL+D   T  F E   L   EI NGR AM  + G
Sbjct: 189 DPIYPGG-SFDPLGLADDPDT--FAE---LKVKEIKNGRLAMFSMFG 229
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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F   R L   E+ + R AM+G +G + P
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFP 115
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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +1

Query: 175 FVVRASSSPPAK----QND-NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 318
           F  +  + PP K    Q+D +R +WF       +LDG++ GD GFDP GL  P
Sbjct: 35  FGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKP 87
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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 259 YLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           YL+G + GD+G+DP GL   PE        ++ A+ E+ + R AM+G  G I P
Sbjct: 84  YLNGEVAGDYGYDPFGLGKKPENFA-----KYQAF-ELIHARWAMLGAAGFIIP 131



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 232 WFASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           ++     L + D   PG   FDPLGL+     G  ++ +     EI NGR AM  ++G
Sbjct: 187 YYRITNGLDFEDKLHPGG-PFDPLGLAKDPEQGALLKVK-----EIKNGRLAMFAMLG 238
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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ +   AM+G +G + P
Sbjct: 8   SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSTWAMLGALGCVFP 56
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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 22/59 (37%), Positives = 33/59 (55%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S ++ +YL G  PGD+G+D  GLS    T  F + R L   E+ + R  M+G +G + P
Sbjct: 63  SGEAPSYLTGEFPGDYGWDTAGLSADPAT--FAKNRKL---EVIHCRWTMLGALGCVFP 116



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           +D   PG   FDPLGL+ DPE    F E   L   EI NGR AM  + G
Sbjct: 186 IDPLYPGG-SFDPLGLADDPE---AFAE---LEVKEIKNGRLAMFSMFG 227
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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S ++ +YL G  PGD+G+D   LS DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAELSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 117
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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           S+ + +YL G  PGD+G+D   +S DPE    F + R L   E+ + R AM+G +G + P
Sbjct: 63  SEGTPSYLTGEFPGDYGWDTAAVSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 116
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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 232 WFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGM 408
           W    Q      G  PGD+G+D  GLS DPE    + E       E+ + R  ++G +GM
Sbjct: 66  WDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARCGLLGALGM 119

Query: 409 IAP 417
           + P
Sbjct: 120 VTP 122



 Score = 32.0 bits (71), Expect = 0.59
 Identities = 23/48 (47%), Positives = 26/48 (54%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVG 405
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR AM   +G
Sbjct: 194 LDPLYPGE-AFDPLGLADDPDT--FAE---LKVKEIKNGRLAMFACLG 235
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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 35.0 bits (79), Expect = 0.070
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS    T  F + R L   E+ + R AM   +G I P
Sbjct: 71  SYLTGEFPGDYGWDTAGLSAYPET--FAKNREL---EVIHSRCAMSAALGCIFP 119
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>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 127

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
 Frame = +1

Query: 271 TLPGDFG-----------FDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIA 414
           T PG FG           FDPLGL+D   T  F E   L   EI NGR AM G++G  A
Sbjct: 33  TAPGQFGEDLDRLYPGGPFDPLGLADDPDT--FPE---LKVKEIKNGRLAMSGMLGFYA 86
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>MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial precursor (EC|
           2.5.1.8) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPP transferase) (IPTase)
           (IPPT) (hGRO1)
          Length = 467

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 291 AKVTRQRAVEVGEGLLGREPQLPVVILLG-RGAGR 190
           A V   RAV VG GL G +  LP+V++LG  G G+
Sbjct: 2   ASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGK 36
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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 417
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R A+   +G + P
Sbjct: 66  SYLTGEFPGDYGWDTEGLSADPE---TFAKNREL---EVIHCRWAIAVGLGCVFP 114
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>GUC2D_HUMAN (Q02846) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC)
          Length = 1103

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTARSSTAGRR*WGW 400
           +A  PWGCP  +A  G+++P   P A +  A  R +GW
Sbjct: 145 IALVPWGCPWTQA-EGTTAPAVTPAADALYALLRAFGW 181
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>GUC2D_CANFA (O19179) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC) (Guanylate
           cyclase E) (GC-E)
          Length = 1109

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTARSSTAGRR*WGW 400
           +A  PW CP  RA  G+++P G P A +  A  R + W
Sbjct: 149 VALVPWSCPGTRA-GGTTAPAGTPAADALYALLRAFRW 185
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>NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor|
           (Na(+)/Ca(2+)-exchange protein 3)
          Length = 927

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
 Frame = -2

Query: 366 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQ-----RAVEVGEGLLGREPQLPVVI 214
           +A+G+P  ++    AL +  P+  + K+T +     R  E+G+ +LG  P+L V+I
Sbjct: 616 IALGEPKWMERGISALLLS-PEVTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVII 670
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>AROC_METKA (Q8TXN1) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 386

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 375 VEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGL 247
           +E +A   PPGL +P      G+  G    +   +AVEVG G+
Sbjct: 216 IEVIAENVPPGLGDPVFGRLDGELAGALMNIPAVKAVEVGSGV 258
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>SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 1) (GluRS 1)
          Length = 473

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 194 DDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPW 90
           D+    K   REE  + K  C   P SC P  R W
Sbjct: 104 DEVAEKKAKAREEGKIYKHKCTTKPPSCHPSSRHW 138
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>NAC3_HUMAN (P57103) Sodium/calcium exchanger 3 precursor|
           (Na(+)/Ca(2+)-exchange protein 3)
          Length = 927

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = -2

Query: 366 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQ-----RAVEVGEGLLGREPQLPVVI 214
           +A+G+P  ++    AL +  P   + K+T +     R  E+G+ +LG  P+L V+I
Sbjct: 616 IALGEPKWMERGISALLLS-PDVTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVII 670
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>GUC2D_BOVIN (P55203) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC) (Guanylate
           cyclase E) (GC-E)
          Length = 1110

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTARSSTAGRR*WGW 400
           +A  PWGCP  RA AG+++P   P A +  A  R + W
Sbjct: 150 VALVPWGCPGTRA-AGTTAPVVTPAADALYALLRAFRW 186
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>GUC2E_RAT (P51840) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate|
           cyclase 2E)
          Length = 1108

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTA 364
           +A  PWGCP  RA AG+++P   P A
Sbjct: 148 VALVPWGCPGTRA-AGTTAPAVTPAA 172
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>GUC2E_MOUSE (P52785) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate|
           cyclase 2E)
          Length = 1108

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTA 364
           +A  PWGCP  RA AG+++P   P A
Sbjct: 148 VALVPWGCPGTRA-AGTTAPAVTPAA 172
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>OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein|
           CPn_1034/CP0818/CPj1034/CpB1074 precursor
          Length = 262

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 218 SFCLAGGLDDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPWAAIVP 75
           +F L   LDD L   G+       + +  +GL     PE+  W A+VP
Sbjct: 41  NFWLILDLDDTLLQGGEALSHSIWKSKAIQGLQKQGTPEQEAWEAVVP 88
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>CBID_METCH (Q9X7G7) Putative cobalt-precorrin-6A synthase [deacetylating] (EC|
           2.1.1.-)
          Length = 361

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -2

Query: 342 LDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLGREPQLPVVILLGRGA 196
           ++   GALR G   G  A    + A E    LLG EP+ PV + L  GA
Sbjct: 1   MNSETGALRRGWTTGTCASAAARAAFEA---LLGIEPEDPVPVTLPSGA 46
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>EDD_RHIME (Q9Z3S0) Phosphogluconate dehydratase (EC 4.2.1.12)|
           (6-phosphogluconate dehydratase)
          Length = 606

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = -2

Query: 366 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLGREPQLPVVILLGRGAGRC 187
           L  G  P +  PAG +  G P   +AKV +  A    EG +GR+  L        G G C
Sbjct: 168 LTFGHLPAVFIPAGPMTTGLPNDEKAKVRQLFA----EGKVGRDELLEAESKSYHGPGTC 223
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>REP2_YEAST (P03872) Trans-acting factor C (REP2) (Protein charlie)|
          Length = 296

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -2

Query: 375 VEDLAVGQPPGLDEPAGALRVGQPQGVE-----AKVTRQRAVEVGEGLLGRE 235
           +E L  G+P GLD  A    V      E     AK+ ++R   +G G+L  +
Sbjct: 58  MESLTTGRPYGLDSSAEDSSVSSDSSAEVILPAAKMVKERFDSIGNGMLSSQ 109


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,701,997
Number of Sequences: 219361
Number of extensions: 811829
Number of successful extensions: 3182
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 2995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3167
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
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