ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet94a12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_187694.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2028 Score = 618 bits (312), Expect = e-174 Identities = 402/432 (93%) Strand = Plus / Plus Query: 1 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgt 60 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct: 1173 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggctccgccgtggccgt 1232 Query: 61 gaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgcatcgcggccat 120 |||||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 1233 gaagcgcctcaaggacgtggaccttccggagccggagttccgggagcgcatcgccgccat 1292 Query: 121 cggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttcagcaaggacga 180 ||||||||||||||||||||| || || || ||||||||||||||||||||||||||||| Sbjct: 1293 cggcgccgtgcagcacgagcttgtcgtcccactccgcgcctactacttcagcaaggacga 1352 Query: 181 gaagctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgggaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1353 gaagctcctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgggaa 1412 Query: 241 ccggtcgtcggggctgacgccgctggactgggaggcgaggtcggcgatcgcgctggcgac 300 ||| | || || ||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 1413 ccgtgcttccggcaggacgccgctggactgggagacgaggtcggcgatcgcgctggcggc 1472 Query: 301 ggcgcgcggggtggcgcacatccactccacgggcccgacggcgtcgcacggcaacatcaa 360 ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1473 ggcgcgcggcgtggcgcacatccactcgacggggccgacggcgtcgcacggcaacatcaa 1532 Query: 361 gtcctccaacgtgctgctcaccaagagctacgaggcccgggtgtcggaccacggcctgcc 420 ||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 1533 gtcgtccaacgtgctgctcaccaagaactacgaggcgcgggtgtcggaccacggcctccc 1592 Query: 421 cacgctcgtcgg 432 |||||| ||||| Sbjct: 1593 cacgctggtcgg 1604
>dbj|AK065199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E20, full insert sequence Length = 2451 Score = 618 bits (312), Expect = e-174 Identities = 402/432 (93%) Strand = Plus / Plus Query: 1 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgt 60 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct: 1304 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggctccgccgtggccgt 1363 Query: 61 gaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgcatcgcggccat 120 |||||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 1364 gaagcgcctcaaggacgtggaccttccggagccggagttccgggagcgcatcgccgccat 1423 Query: 121 cggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttcagcaaggacga 180 ||||||||||||||||||||| || || || ||||||||||||||||||||||||||||| Sbjct: 1424 cggcgccgtgcagcacgagcttgtcgtcccactccgcgcctactacttcagcaaggacga 1483 Query: 181 gaagctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgggaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1484 gaagctcctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgggaa 1543 Query: 241 ccggtcgtcggggctgacgccgctggactgggaggcgaggtcggcgatcgcgctggcgac 300 ||| | || || ||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 1544 ccgtgcttccggcaggacgccgctggactgggagacgaggtcggcgatcgcgctggcggc 1603 Query: 301 ggcgcgcggggtggcgcacatccactccacgggcccgacggcgtcgcacggcaacatcaa 360 ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1604 ggcgcgcggcgtggcgcacatccactcgacggggccgacggcgtcgcacggcaacatcaa 1663 Query: 361 gtcctccaacgtgctgctcaccaagagctacgaggcccgggtgtcggaccacggcctgcc 420 ||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 1664 gtcgtccaacgtgctgctcaccaagaactacgaggcgcgggtgtcggaccacggcctccc 1723 Query: 421 cacgctcgtcgg 432 |||||| ||||| Sbjct: 1724 cacgctggtcgg 1735
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 367 bits (185), Expect = 2e-98 Identities = 224/237 (94%) Strand = Plus / Plus Query: 1 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgt 60 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct: 6404485 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggctccgccgtggccgt 6404544 Query: 61 gaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgcatcgcggccat 120 |||||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 6404545 gaagcgcctcaaggacgtggaccttccggagccggagttccgggagcgcatcgccgccat 6404604 Query: 121 cggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttcagcaaggacga 180 ||||||||||||||||||||| || || || ||||||||||||||||||||||||||||| Sbjct: 6404605 cggcgccgtgcagcacgagcttgtcgtcccactccgcgcctactacttcagcaaggacga 6404664 Query: 181 gaagctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 237 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6404665 gaagctcctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 6404721 Score = 272 bits (137), Expect = 9e-70 Identities = 167/177 (94%) Strand = Plus / Plus Query: 256 gacgccgctggactgggaggcgaggtcggcgatcgcgctggcgacggcgcgcggggtggc 315 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 6405824 gacgccgctggactgggagacgaggtcggcgatcgcgctggcggcggcgcgcggcgtggc 6405883 Query: 316 gcacatccactccacgggcccgacggcgtcgcacggcaacatcaagtcctccaacgtgct 375 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6405884 gcacatccactcgacggggccgacggcgtcgcacggcaacatcaagtcgtccaacgtgct 6405943 Query: 376 gctcaccaagagctacgaggcccgggtgtcggaccacggcctgcccacgctcgtcgg 432 ||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 6405944 gctcaccaagaactacgaggcgcgggtgtcggaccacggcctccccacgctggtcgg 6406000 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 51 cggtggccgtgaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgca 110 ||||||| |||||| |||||||||| ||| ||| |||||||||||||||| || || | Sbjct: 28502930 cggtggcagtgaagaggctcaaggatgtgaccctgaccgagccggagttccgtgaccgga 28502871 Query: 111 tcgcggccatcggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttca 170 | || | ||| |||| ||||||||||| | | || ||||| || ||||| |||| || Sbjct: 28502870 ttgctgacattggcgagctgcagcacgagttcatcgttccccttcgtgcctattactaca 28502811 Query: 171 gcaaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctc 222 |||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 28502810 gcaaagacgagaagctgctcgtctacgacttcatgcccatgggcagcctctc 28502759 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 42 gcggcgcggcggtggccgtgaagcggctc 70 ||||||||| ||||||||||||||||||| Sbjct: 6774474 gcggcgcggtggtggccgtgaagcggctc 6774446 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 |||||||||||||| |||||| ||| |||||||||| Sbjct: 16567471 ctgctcgtctacgagtacatggccaagggcagcctc 16567436 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 ggcggtggccgtgaagcggctcaag 73 ||||||||||||||||| ||||||| Sbjct: 31880490 ggcggtggccgtgaagcagctcaag 31880466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 34242643 tgctcgtctacgactacatg 34242624 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagcggcgcggcggtggccg 59 |||||||||||||||||||| Sbjct: 31482297 gagcggcgcggcggtggccg 31482278
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 367 bits (185), Expect = 2e-98 Identities = 224/237 (94%) Strand = Plus / Plus Query: 1 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgt 60 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct: 84611 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggctccgccgtggccgt 84670 Query: 61 gaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgcatcgcggccat 120 |||||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 84671 gaagcgcctcaaggacgtggaccttccggagccggagttccgggagcgcatcgccgccat 84730 Query: 121 cggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttcagcaaggacga 180 ||||||||||||||||||||| || || || ||||||||||||||||||||||||||||| Sbjct: 84731 cggcgccgtgcagcacgagcttgtcgtcccactccgcgcctactacttcagcaaggacga 84790 Query: 181 gaagctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 237 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84791 gaagctcctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 84847 Score = 272 bits (137), Expect = 9e-70 Identities = 167/177 (94%) Strand = Plus / Plus Query: 256 gacgccgctggactgggaggcgaggtcggcgatcgcgctggcgacggcgcgcggggtggc 315 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 85950 gacgccgctggactgggagacgaggtcggcgatcgcgctggcggcggcgcgcggcgtggc 86009 Query: 316 gcacatccactccacgggcccgacggcgtcgcacggcaacatcaagtcctccaacgtgct 375 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 86010 gcacatccactcgacggggccgacggcgtcgcacggcaacatcaagtcgtccaacgtgct 86069 Query: 376 gctcaccaagagctacgaggcccgggtgtcggaccacggcctgcccacgctcgtcgg 432 ||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 86070 gctcaccaagaactacgaggcgcgggtgtcggaccacggcctccccacgctggtcgg 86126
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 367 bits (185), Expect = 2e-98 Identities = 224/237 (94%) Strand = Plus / Plus Query: 1 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgt 60 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct: 6403698 caagggcgcgttcgggacggcgtacaaggcggtgatggagagcggctccgccgtggccgt 6403757 Query: 61 gaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgcatcgcggccat 120 |||||| ||||||||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 6403758 gaagcgcctcaaggacgtggaccttccggagccggagttccgggagcgcatcgccgccat 6403817 Query: 121 cggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttcagcaaggacga 180 ||||||||||||||||||||| || || || ||||||||||||||||||||||||||||| Sbjct: 6403818 cggcgccgtgcagcacgagcttgtcgtcccactccgcgcctactacttcagcaaggacga 6403877 Query: 181 gaagctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 237 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6403878 gaagctcctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 6403934 Score = 272 bits (137), Expect = 9e-70 Identities = 167/177 (94%) Strand = Plus / Plus Query: 256 gacgccgctggactgggaggcgaggtcggcgatcgcgctggcgacggcgcgcggggtggc 315 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 6405037 gacgccgctggactgggagacgaggtcggcgatcgcgctggcggcggcgcgcggcgtggc 6405096 Query: 316 gcacatccactccacgggcccgacggcgtcgcacggcaacatcaagtcctccaacgtgct 375 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6405097 gcacatccactcgacggggccgacggcgtcgcacggcaacatcaagtcgtccaacgtgct 6405156 Query: 376 gctcaccaagagctacgaggcccgggtgtcggaccacggcctgcccacgctcgtcgg 432 ||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 6405157 gctcaccaagaactacgaggcgcgggtgtcggaccacggcctccccacgctggtcgg 6405213 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 51 cggtggccgtgaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgca 110 ||||||| |||||| |||||||||| ||| ||| |||||||||||||||| || || | Sbjct: 28594254 cggtggcagtgaagaggctcaaggatgtgaccctgaccgagccggagttccgtgaccgga 28594195 Query: 111 tcgcggccatcggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttca 170 | || | ||| |||| ||||||||||| | | || ||||| || ||||| |||| || Sbjct: 28594194 ttgctgacattggcgagctgcagcacgagttcatcgttccccttcgtgcctattactaca 28594135 Query: 171 gcaaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctc 222 |||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 28594134 gcaaagacgagaagctgctcgtctacgacttcatgcccatgggcagcctctc 28594083 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 42 gcggcgcggcggtggccgtgaagcggctc 70 ||||||||| ||||||||||||||||||| Sbjct: 6773687 gcggcgcggtggtggccgtgaagcggctc 6773659 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 |||||||||||||| |||||| ||| |||||||||| Sbjct: 16561104 ctgctcgtctacgagtacatggccaagggcagcctc 16561069 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 ggcggtggccgtgaagcggctcaag 73 ||||||||||||||||| ||||||| Sbjct: 31971006 ggcggtggccgtgaagcagctcaag 31970982 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 34333115 tgctcgtctacgactacatg 34333096 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagcggcgcggcggtggccg 59 |||||||||||||||||||| Sbjct: 31572813 gagcggcgcggcggtggccg 31572794
>dbj|AK070591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055M11, full insert sequence Length = 1566 Score = 272 bits (137), Expect = 9e-70 Identities = 167/177 (94%) Strand = Plus / Plus Query: 256 gacgccgctggactgggaggcgaggtcggcgatcgcgctggcgacggcgcgcggggtggc 315 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 609 gacgccgctggactgggagacgaggtcggcgatcgcgctggcggcggcgcgcggcgtggc 668 Query: 316 gcacatccactccacgggcccgacggcgtcgcacggcaacatcaagtcctccaacgtgct 375 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 669 gcacatccactcgacggggccgacggcgtcgcacggcaacatcaagtcgtccaacgtgct 728 Query: 376 gctcaccaagagctacgaggcccgggtgtcggaccacggcctgcccacgctcgtcgg 432 ||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 729 gctcaccaagaactacgaggcgcgggtgtcggaccacggcctccccacgctggtcgg 785
>dbj|AK061811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A12, full insert sequence Length = 1123 Score = 272 bits (137), Expect = 9e-70 Identities = 167/177 (94%) Strand = Plus / Plus Query: 256 gacgccgctggactgggaggcgaggtcggcgatcgcgctggcgacggcgcgcggggtggc 315 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 234 gacgccgctggactgggagacgaggtcggcgatcgcgctggcggcggcgcgcggcgtggc 293 Query: 316 gcacatccactccacgggcccgacggcgtcgcacggcaacatcaagtcctccaacgtgct 375 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 294 gcacatccactcgacggggccgacggcgtcgcacggcaacatcaagtcgtccaacgtgct 353 Query: 376 gctcaccaagagctacgaggcccgggtgtcggaccacggcctgcccacgctcgtcgg 432 ||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 354 gctcaccaagaactacgaggcgcgggtgtcggaccacggcctccccacgctggtcgg 410
>gb|AY107418.1| Zea mays PCO102965 mRNA sequence Length = 1084 Score = 244 bits (123), Expect = 2e-61 Identities = 172/187 (91%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 256 gacgccgctggactgggaggcgaggtcggcgatcgcgctggcgacggcgcgcggggtgg- 314 ||||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||| Sbjct: 164 gacgccgctggactgggagacgcggtcggcgatcgcgctggcggcggctcgcggcgtggg 223 Query: 315 cgcacatccactccacgggcccgacggcgtcgcacggcaacatcaagtcctccaacgtgc 374 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | Sbjct: 224 cgcacatccactccacggggcccacggcgtcgcacggcaacatcaagtcctccaacgtcc 283 Query: 375 tgctcaccaagagctacgaggcccgggtgtcggaccacggcctgcccacgctcgtcggtc 434 | |||||||||| ||||||||| || ||||||||||||||||| |||||||||||||| | Sbjct: 284 ttctcaccaagaactacgaggcgcgcgtgtcggaccacggcctccccacgctcgtcggcc 343 Query: 435 cctcctt 441 ||||||| Sbjct: 344 cctcctt 350
>ref|XM_469524.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2456 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 51 cggtggccgtgaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgca 110 ||||||| |||||| |||||||||| ||| ||| |||||||||||||||| || || | Sbjct: 1202 cggtggcagtgaagaggctcaaggatgtgaccctgaccgagccggagttccgtgaccgga 1261 Query: 111 tcgcggccatcggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttca 170 | || | ||| |||| ||||||||||| | | || ||||| || ||||| |||| || Sbjct: 1262 ttgctgacattggcgagctgcagcacgagttcatcgttccccttcgtgcctattactaca 1321 Query: 171 gcaaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctc 222 |||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 1322 gcaaagacgagaagctgctcgtctacgacttcatgcccatgggcagcctctc 1373
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 51 cggtggccgtgaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgca 110 ||||||| |||||| |||||||||| ||| ||| |||||||||||||||| || || | Sbjct: 97060 cggtggcagtgaagaggctcaaggatgtgaccctgaccgagccggagttccgtgaccgga 97001 Query: 111 tcgcggccatcggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttca 170 | || | ||| |||| ||||||||||| | | || ||||| || ||||| |||| || Sbjct: 97000 ttgctgacattggcgagctgcagcacgagttcatcgttccccttcgtgcctattactaca 96941 Query: 171 gcaaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctc 222 |||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 96940 gcaaagacgagaagctgctcgtctacgacttcatgcccatgggcagcctctc 96889
>dbj|AK111063.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-D10, full insert sequence Length = 611 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 51 cggtggccgtgaagcggctcaaggacgtggacctccccgagccggagttccgcgagcgca 110 ||||||| |||||| |||||||||| ||| ||| |||||||||||||||| || || | Sbjct: 322 cggtggcagtgaagaggctcaaggatgtgaccctgaccgagccggagttccgtgaccgga 381 Query: 111 tcgcggccatcggcgccgtgcagcacgagctggtggtgcccctccgcgcctactacttca 170 | || | ||| |||| ||||||||||| | | || ||||| || ||||| |||| || Sbjct: 382 ttgctgacattggcgagctgcagcacgagttcatcgttccccttcgtgcctattactaca 441 Query: 171 gcaaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctc 222 |||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 442 gcaaagacgagaagctgctcgtctacgacttcatgcccatgggcagcctctc 493
>ref|NM_192712.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1443 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 153 tccgcgcctactacttcagcaaggacgagaagctgctcgtctacgactacatgtccatgg 212 ||||||||||||||||| ||||||||||||||| ||||||| ||||||| | ||| | Sbjct: 1307 tccgcgcctactacttctccaaggacgagaagctcctcgtcttcgactacctccccaacg 1366 Query: 213 gcagcctctccgccctcctccacgg 237 |||||||||||||| | |||||||| Sbjct: 1367 gcagcctctccgccatgctccacgg 1391 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 14 gggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcggctcaag 73 |||||| |||||||||||||| ||||| || || |||||| ||||||||||||||| Sbjct: 1168 gggacgtcgtacaaggcggtgctggaggaagggacgacggtggtggtgaagcggctcaag 1227 Query: 74 gacgtgg 80 ||||||| Sbjct: 1228 gacgtgg 1234
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 153 tccgcgcctactacttcagcaaggacgagaagctgctcgtctacgactacatgtccatgg 212 ||||||||||||||||| ||||||||||||||| ||||||| ||||||| | ||| | Sbjct: 23976592 tccgcgcctactacttctccaaggacgagaagctcctcgtcttcgactacctccccaacg 23976533 Query: 213 gcagcctctccgccctcctccacgg 237 |||||||||||||| | |||||||| Sbjct: 23976532 gcagcctctccgccatgctccacgg 23976508 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 176 gacgagaagctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccac 235 ||||||||||||||||||||||| | |||| ||| |||||||||| | ||||||| ||| Sbjct: 1868333 gacgagaagctgctcgtctacgagttcatgcccaacggcagcctcttctccctcctgcac 1868392 Query: 236 gg 237 || Sbjct: 1868393 gg 1868394 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 14 gggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcggctcaag 73 |||||| |||||||||||||| ||||| || || |||||| ||||||||||||||| Sbjct: 23976731 gggacgtcgtacaaggcggtgctggaggaagggacgacggtggtggtgaagcggctcaag 23976672 Query: 74 gacgtgg 80 ||||||| Sbjct: 23976671 gacgtgg 23976665 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 346 gcacggcaacatcaagtcctccaacgtgctgctc 379 |||||||||| |||||||||||||||| |||||| Sbjct: 23973046 gcacggcaacgtcaagtcctccaacgtcctgctc 23973013 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 43 cggcgcggcggtggccgtgaagcggctcaag 73 |||||||| |||||||||||||||| ||||| Sbjct: 16069706 cggcgcggaggtggccgtgaagcggttcaag 16069736 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Minus Query: 2 aagggcgcgttcgggacggcgtacaaggcggtgatggag 40 |||||||||||||| ||||||||| ||||||| ||||| Sbjct: 6767927 aagggcgcgttcggcacggcgtaccgggcggtgctggag 6767889 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 172 caaggacgagaagctgctcgtctacga 198 |||||||||||||||||| |||||||| Sbjct: 6767757 caaggacgagaagctgcttgtctacga 6767731 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 8364122 tgctcgtctacgactacatg 8364103
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 153 tccgcgcctactacttcagcaaggacgagaagctgctcgtctacgactacatgtccatgg 212 ||||||||||||||||| ||||||||||||||| ||||||| ||||||| | ||| | Sbjct: 122996 tccgcgcctactacttctccaaggacgagaagctcctcgtcttcgactacctccccaacg 122937 Query: 213 gcagcctctccgccctcctccacgg 237 |||||||||||||| | |||||||| Sbjct: 122936 gcagcctctccgccatgctccacgg 122912 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 14 gggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcggctcaag 73 |||||| |||||||||||||| ||||| || || |||||| ||||||||||||||| Sbjct: 123135 gggacgtcgtacaaggcggtgctggaggaagggacgacggtggtggtgaagcggctcaag 123076 Query: 74 gacgtgg 80 ||||||| Sbjct: 123075 gacgtgg 123069 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 346 gcacggcaacatcaagtcctccaacgtgctgctc 379 |||||||||| |||||||||||||||| |||||| Sbjct: 119450 gcacggcaacgtcaagtcctccaacgtcctgctc 119417
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 153 tccgcgcctactacttcagcaaggacgagaagctgctcgtctacgactacatgtccatgg 212 ||||||||||||||||| ||||||||||||||| ||||||| ||||||| | ||| | Sbjct: 91114 tccgcgcctactacttctccaaggacgagaagctcctcgtcttcgactacctccccaacg 91055 Query: 213 gcagcctctccgccctcctccacgg 237 |||||||||||||| | |||||||| Sbjct: 91054 gcagcctctccgccatgctccacgg 91030 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 14 gggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcggctcaag 73 |||||| |||||||||||||| ||||| || || |||||| ||||||||||||||| Sbjct: 91253 gggacgtcgtacaaggcggtgctggaggaagggacgacggtggtggtgaagcggctcaag 91194 Query: 74 gacgtgg 80 ||||||| Sbjct: 91193 gacgtgg 91187 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 346 gcacggcaacatcaagtcctccaacgtgctgctc 379 |||||||||| |||||||||||||||| |||||| Sbjct: 87568 gcacggcaacgtcaagtcctccaacgtcctgctc 87535
>ref|XM_550037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2376 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 176 gacgagaagctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccac 235 ||||||||||||||||||||||| | |||| ||| |||||||||| | ||||||| ||| Sbjct: 1627 gacgagaagctgctcgtctacgagttcatgcccaacggcagcctcttctccctcctgcac 1686 Query: 236 gggaaccg 243 || ||||| Sbjct: 1687 ggtaaccg 1694
>ref|XM_472767.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2010 Score = 60.0 bits (30), Expect = 6e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 287 atcgcgctggcgacggcgcgcggggtggcgcacatccactccacgggcccgacggcgtcg 346 |||||||||||| ||||||||||| ||| | |||||||| | |||||| | | || | | Sbjct: 1402 atcgcgctggcgtcggcgcgcgggctggagtacatccacgcgacgggctccaaggtggtg 1461 Query: 347 cacggcaacatcaagtcctccaacgt 372 ||||||||||||||||| || ||||| Sbjct: 1462 cacggcaacatcaagtcgtcgaacgt 1487 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 158 gcctactacttcagcaaggacgagaagct 186 ||||||||||||||||||||||||||||| Sbjct: 1273 gcctactacttcagcaaggacgagaagct 1301
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 60.0 bits (30), Expect = 6e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 287 atcgcgctggcgacggcgcgcggggtggcgcacatccactccacgggcccgacggcgtcg 346 |||||||||||| ||||||||||| ||| | |||||||| | |||||| | | || | | Sbjct: 92120 atcgcgctggcgtcggcgcgcgggctggagtacatccacgcgacgggctccaaggtggtg 92061 Query: 347 cacggcaacatcaagtcctccaacgt 372 ||||||||||||||||| || ||||| Sbjct: 92060 cacggcaacatcaagtcgtcgaacgt 92035 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 158 gcctactacttcagcaaggacgagaagct 186 ||||||||||||||||||||||||||||| Sbjct: 92333 gcctactacttcagcaaggacgagaagct 92305
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 6e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 287 atcgcgctggcgacggcgcgcggggtggcgcacatccactccacgggcccgacggcgtcg 346 |||||||||||| ||||||||||| ||| | |||||||| | |||||| | | || | | Sbjct: 23095780 atcgcgctggcgtcggcgcgcgggctggagtacatccacgcgacgggctccaaggtggtg 23095721 Query: 347 cacggcaacatcaagtcctccaacgt 372 ||||||||||||||||| || ||||| Sbjct: 23095720 cacggcaacatcaagtcgtcgaacgt 23095695 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 158 gcctactacttcagcaaggacgagaagct 186 ||||||||||||||||||||||||||||| Sbjct: 23095993 gcctactacttcagcaaggacgagaagct 23095965 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 ||||| || |||||||||||||||| ||||||||| Sbjct: 26551164 ctgctggtgtacgactacatgtccaacggcagcctc 26551199
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 176 gacgagaagctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccac 235 ||||||||||||||||||||||| | |||| ||| |||||||||| | ||||||| ||| Sbjct: 109715 gacgagaagctgctcgtctacgagttcatgcccaacggcagcctcttctccctcctgcac 109774 Query: 236 gg 237 || Sbjct: 109775 gg 109776
>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete sequence Length = 43144 Score = 60.0 bits (30), Expect = 6e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 287 atcgcgctggcgacggcgcgcggggtggcgcacatccactccacgggcccgacggcgtcg 346 |||||||||||| ||||||||||| ||| | |||||||| | |||||| | | || | | Sbjct: 16703 atcgcgctggcgtcggcgcgcgggctggagtacatccacgcgacgggctccaaggtggtg 16644 Query: 347 cacggcaacatcaagtcctccaacgt 372 ||||||||||||||||| || ||||| Sbjct: 16643 cacggcaacatcaagtcgtcgaacgt 16618 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 158 gcctactacttcagcaaggacgagaagct 186 ||||||||||||||||||||||||||||| Sbjct: 16916 gcctactacttcagcaaggacgagaagct 16888
>dbj|AK120857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024D23, full insert sequence Length = 2416 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 158 gcctactacttcagcaaggacgagaagct 186 ||||||||||||||||||||||||||||| Sbjct: 1383 gcctactacttcagcaaggacgagaagct 1411 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 287 atcgcgctggcgacggcgcgcggggtggcgcacatccactccacgggcccgacggcgtcg 346 |||||||||||| ||||||||||| ||| | |||||||| | |||||| | | || | | Sbjct: 1512 atcgcgctggcgtcggcgcgcgggctggagtacatccacgcgacgggctccaaggtggtg 1571 Query: 347 cacggcaacatcaagtcctccaacgt 372 ||||||||| ||||||| || ||||| Sbjct: 1572 cacggcaacgtcaagtcgtcgaacgt 1597
>gb|DQ184949.1| Malus x domestica putative receptor kinase (DIPM2) mRNA, complete cds Length = 2445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 2 aagggcgcgttcgggacggcgtacaaggcggt 33 ||||||| |||||||||||||||||||||||| Sbjct: 1187 aagggcgggttcgggacggcgtacaaggcggt 1218
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 160 ctactacttcagcaaggacgagaagctgctcgtctacgactacatgtccatgggcagcct 219 |||||||||| ||||||||||||||| ||||||| ||||||| | || |||||||| Sbjct: 98328 ctactacttctccaaggacgagaagctcctcgtctgcgactacctccccgccggcagcct 98387 Query: 220 ctccgcc 226 ||||||| Sbjct: 98388 ctccgcc 98394 Score = 46.1 bits (23), Expect = 0.096 Identities = 56/67 (83%) Strand = Plus / Plus Query: 14 gggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcggctcaag 73 |||||| |||||||||||||| ||||| ||||| |||||| |||||||| |||||| Sbjct: 98182 gggacgtcgtacaaggcggtgctggaggagggcgccacggtggtggtgaagcgcctcaag 98241 Query: 74 gacgtgg 80 || |||| Sbjct: 98242 gaggtgg 98248
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 160 ctactacttcagcaaggacgagaagctgctcgtctacgactacatgtccatgggcagcct 219 |||||||||| ||||||||||||||| ||||||| ||||||| | || |||||||| Sbjct: 14497 ctactacttctccaaggacgagaagctcctcgtctgcgactacctccccgccggcagcct 14556 Query: 220 ctccgcc 226 ||||||| Sbjct: 14557 ctccgcc 14563 Score = 46.1 bits (23), Expect = 0.096 Identities = 56/67 (83%) Strand = Plus / Plus Query: 14 gggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcggctcaag 73 |||||| |||||||||||||| ||||| ||||| |||||| |||||||| |||||| Sbjct: 14351 gggacgtcgtacaaggcggtgctggaggagggcgccacggtggtggtgaagcgcctcaag 14410 Query: 74 gacgtgg 80 || |||| Sbjct: 14411 gaggtgg 14417
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 152 ctccgcgcctactacttcagcaaggacgagaagctgctcgtct 194 ||||||||||||| || ||||| |||||||||||| ||||||| Sbjct: 13954015 ctccgcgcctacttctacagcagggacgagaagctcctcgtct 13953973 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagagcggcgcggcggtgg 56 |||||||||||||||||||| Sbjct: 13225423 ggagagcggcgcggcggtgg 13225404
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 160 ctactacttcagcaaggacgagaagctgctcgtctacgactacatgtccatgggcagcct 219 |||||||||| ||||||||||||||| ||||||| ||||||| | || |||||||| Sbjct: 29088273 ctactacttctccaaggacgagaagctcctcgtctgcgactacctccccgccggcagcct 29088332 Query: 220 ctccgcc 226 ||||||| Sbjct: 29088333 ctccgcc 29088339 Score = 46.1 bits (23), Expect = 0.096 Identities = 56/67 (83%) Strand = Plus / Plus Query: 14 gggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcggctcaag 73 |||||| |||||||||||||| ||||| ||||| |||||| |||||||| |||||| Sbjct: 29088127 gggacgtcgtacaaggcggtgctggaggagggcgccacggtggtggtgaagcgcctcaag 29088186 Query: 74 gacgtgg 80 || |||| Sbjct: 29088187 gaggtgg 29088193 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatg 205 ||||||||||||||||||||| Sbjct: 1395803 ctgctcgtctacgactacatg 1395823 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcggcgcggcggtggccgtg 61 |||||||||||||||||||| Sbjct: 24817718 gcggcgcggcggtggccgtg 24817699
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 152 ctccgcgcctactacttcagcaaggacgagaagctgctcgtct 194 ||||||||||||| || ||||| |||||||||||| ||||||| Sbjct: 107692 ctccgcgcctacttctacagcagggacgagaagctcctcgtct 107650
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 152 ctccgcgcctactacttcagcaaggacgagaagctgctcgtct 194 ||||||||||||| || ||||| |||||||||||| ||||||| Sbjct: 56489 ctccgcgcctacttctacagcagggacgagaagctcctcgtct 56447
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3262 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 184 gctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 237 ||||||||||||||| |||||| ||| ||||||||| || |||||||||||| Sbjct: 2322 gctgctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccacgg 2375
>ref|NM_192711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 346 gcacggcaacatcaagtcctccaacgtgctgctc 379 |||||||||| |||||||||||||||| |||||| Sbjct: 63 gcacggcaacgtcaagtcctccaacgtcctgctc 96
>gb|AF243041.1| Zea mays receptor-like protein kinase 1 (PRK1) gene, complete cds Length = 3416 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 cgcctactacttcagcaaggacgagaagctgctcgtctacgactac 202 ||||||||||| | ||||||| |||||||||||| || |||||||| Sbjct: 2130 cgcctactactaccgcaaggaggagaagctgctcatccacgactac 2175
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 184 gctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 237 ||||||||||||||| |||||| ||| ||||||||| || |||||||||||| Sbjct: 17644325 gctgctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccacgg 17644272 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Minus Query: 151 cctccgcgcctactacttcagcaaggacgagaagctgctcgtctacga 198 ||||| |||||||| || ||||| ||| |||||||| ||||||||||| Sbjct: 20560900 cctcctcgcctacttctacagcagggaggagaagctcctcgtctacga 20560853 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 95 gagttccgcgagcgcatcgcggccatcggcgccgt 129 |||||||| || ||| ||||||||||||||||||| Sbjct: 20560956 gagttccgggaccgcgtcgcggccatcggcgccgt 20560922 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 212 ggcagcctctccgccctcctccacgg 237 ||||||||| |||||||||||||||| Sbjct: 20560836 ggcagcctcgccgccctcctccacgg 20560811 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 gtggccgtgaagcggctcaaggac 76 ||||| |||||||||||||||||| Sbjct: 21574132 gtggcggtgaagcggctcaaggac 21574109
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 13 cgggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcg 66 |||| ||||||||||||||||||||| || ||||| ||| |||| |||||||| Sbjct: 5030059 cgggtcggcgtacaaggcggtgatggcgaacggcgtggccgtggtggtgaagcg 5030112 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 5 ggcgcgttcgggacggcgtacaaggcgg 32 |||||||||||||||| ||||||||||| Sbjct: 10158941 ggcgcgttcgggacggtgtacaaggcgg 10158968 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 ggtggccgtgaagcggctcaaggacg 77 |||||| ||||||||||||||||||| Sbjct: 9330091 ggtggcggtgaagcggctcaaggacg 9330116 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 175 ggacgagaagctgctcgtctacgactacat 204 ||||||||||||||| |||||||| ||||| Sbjct: 5030224 ggacgagaagctgctggtctacgagtacat 5030253 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 gcggcgcggcggtggccgtgaagcg 66 |||||||||||| |||||||||||| Sbjct: 27478668 gcggcgcggcggcggccgtgaagcg 27478692 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ctgctcgtctacgactacatg 205 ||||||||||||||||||||| Sbjct: 7965716 ctgctcgtctacgactacatg 7965696
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 13 cgggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcg 66 |||| ||||||||||||||||||||| || ||||| ||| |||| |||||||| Sbjct: 72173 cgggtcggcgtacaaggcggtgatggcgaacggcgtggccgtggtggtgaagcg 72226 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 175 ggacgagaagctgctcgtctacgactacat 204 ||||||||||||||| |||||||| ||||| Sbjct: 72338 ggacgagaagctgctggtctacgagtacat 72367
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 184 gctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 237 ||||||||||||||| |||||| ||| ||||||||| || |||||||||||| Sbjct: 120975 gctgctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccacgg 120922
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 184 gctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 237 ||||||||||||||| |||||| ||| ||||||||| || |||||||||||| Sbjct: 29714 gctgctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccacgg 29661
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full insert sequence Length = 3262 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 184 gctgctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgg 237 ||||||||||||||| |||||| ||| ||||||||| || |||||||||||| Sbjct: 2322 gctgctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccacgg 2375
>dbj|AK071363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092F04, full insert sequence Length = 2303 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 13 cgggacggcgtacaaggcggtgatggagagcggcgcggcggtggccgtgaagcg 66 |||| ||||||||||||||||||||| || ||||| ||| |||| |||||||| Sbjct: 1156 cgggtcggcgtacaaggcggtgatggcgaacggcgtggccgtggtggtgaagcg 1209 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 175 ggacgagaagctgctcgtctacgactacat 204 ||||||||||||||| |||||||| ||||| Sbjct: 1321 ggacgagaagctgctggtctacgagtacat 1350
>ref|XM_470602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3006 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 42 gcggcgcggcggtggccgtgaagcggctc 70 ||||||||| ||||||||||||||||||| Sbjct: 2102 gcggcgcggtggtggccgtgaagcggctc 2130
>ref|XM_467048.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1328 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 347 cacggcaacatcaagtcctccaacgtgctgctc 379 |||||| ||||||||||||| |||||||||||| Sbjct: 582 cacggcgacatcaagtcctcgaacgtgctgctc 614
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 42 gcggcgcggcggtggccgtgaagcggctc 70 ||||||||| ||||||||||||||||||| Sbjct: 50271 gcggcgcggtggtggccgtgaagcggctc 50299
>gb|AY224423.1| Oryza sativa (japonica cultivar-group) isolate 20130 putative receptor protein kinase mRNA, complete cds Length = 594 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 347 cacggcaacatcaagtcctccaacgtgctgctc 379 |||||| ||||||||||||| |||||||||||| Sbjct: 70 cacggcgacatcaagtcctcgaacgtgctgctc 102
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 347 cacggcaacatcaagtcctccaacgtgctgctc 379 |||||| ||||||||||||| |||||||||||| Sbjct: 26109676 cacggcgacatcaagtcctcgaacgtgctgctc 26109644 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 186 tgctcgtctacgactacatgtccatgggcagcctc 220 ||||||||||||| |||||| ||| |||||||||| Sbjct: 32936334 tgctcgtctacgagtacatggccaggggcagcctc 32936300 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 cgtacaaggcggtgatggaga 41 ||||||||||||||||||||| Sbjct: 35727882 cgtacaaggcggtgatggaga 35727862 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 acatcaagtcctccaacgtgctgctcacc 382 |||||||||| || ||||||||||||||| Sbjct: 35282524 acatcaagtcgtcgaacgtgctgctcacc 35282496 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 7221254 aagctgctcgtctacgagtacatg 7221231
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 347 cacggcaacatcaagtcctccaacgtgctgctc 379 |||||| ||||||||||||| |||||||||||| Sbjct: 6503 cacggcgacatcaagtcctcgaacgtgctgctc 6471
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 347 cacggcaacatcaagtcctccaacgtgctgctc 379 |||||| ||||||||||||| |||||||||||| Sbjct: 117122 cacggcgacatcaagtcctcgaacgtgctgctc 117090
>dbj|AK121286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108P09, full insert sequence Length = 3313 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 42 gcggcgcggcggtggccgtgaagcggctc 70 ||||||||| ||||||||||||||||||| Sbjct: 2154 gcggcgcggtggtggccgtgaagcggctc 2182
>dbj|AK111267.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-F08, full insert sequence Length = 1328 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 347 cacggcaacatcaagtcctccaacgtgctgctc 379 |||||| ||||||||||||| |||||||||||| Sbjct: 582 cacggcgacatcaagtcctcgaacgtgctgctc 614
>ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 151 cctccgcgcctactacttcagcaaggacgagaagctgctcgtctacga 198 ||||| |||||||| || ||||| ||| |||||||| ||||||||||| Sbjct: 1233 cctcctcgcctacttctacagcagggaggagaagctcctcgtctacga 1280 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Plus Query: 95 gagttccgcgagcgcatcgcggccatcggcgccgt 129 |||||||| || ||| ||||||||||||||||||| Sbjct: 1177 gagttccgggaccgcgtcgcggccatcggcgccgt 1211 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 212 ggcagcctctccgccctcctccacgg 237 ||||||||| |||||||||||||||| Sbjct: 1297 ggcagcctcgccgccctcctccacgg 1322
>ref|XM_468604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1347 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 |||||||||||||| |||||| ||| |||||||||| Sbjct: 508 ctgctcgtctacgagtacatggccaagggcagcctc 543
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 |||||||||||||| |||||| ||| |||||||||| Sbjct: 16861 ctgctcgtctacgagtacatggccaagggcagcctc 16896
>gb|AC166566.2| Spironucleus vortens clone JGIBAWF-9N13, complete sequence Length = 39842 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 288 tcgcgctggcgacggcgcgcgggg 311 |||||||||||||||||||||||| Sbjct: 31718 tcgcgctggcgacggcgcgcgggg 31695
>emb|X58355.1|BBBVGAS B.bronchiseptica bvg locus (transcription regulators of virulence factors) with bvgA and bvgS genes Length = 4534 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 286 gatcgcgctggcgacggcgcgcgg 309 |||||||||||||||||||||||| Sbjct: 2287 gatcgcgctggcgacggcgcgcgg 2310
>emb|X52948.1|BPBGVAS B.parapertussis bvg locus (transcription regulators of virulence factors) with bvgA and bvgS genes Length = 6900 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 286 gatcgcgctggcgacggcgcgcgg 309 |||||||||||||||||||||||| Sbjct: 2781 gatcgcgctggcgacggcgcgcgg 2804
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 286 gatcgcgctggcgacggcgcgcgg 309 |||||||||||||||||||||||| Sbjct: 65329 gatcgcgctggcgacggcgcgcgg 65352
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 286 gatcgcgctggcgacggcgcgcgg 309 |||||||||||||||||||||||| Sbjct: 138349 gatcgcgctggcgacggcgcgcgg 138372
>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete sequence Length = 133843 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 |||||||||||||| |||||| ||| |||||||||| Sbjct: 86572 ctgctcgtctacgagtacatggccaagggcagcctc 86607
>gb|AC158187.2| Selaginella moellendorffii clone JGIASXY-5I19, complete sequence Length = 40590 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 345 cgcacggcaacatcaagtcctccaacgtgctgctcaccaagagctacgaggc 396 |||| |||||||||||||| ||||| || || |||||| |||| |||||||| Sbjct: 9149 cgcatggcaacatcaagtcgtccaatgttcttctcaccgagaggtacgaggc 9200 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 cgagaagctgctcgtctacgactacatg 205 |||||||||||| || |||||||||||| Sbjct: 8934 cgagaagctgctggtatacgactacatg 8961
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 5 ggcgcgttcgggacggcgtacaaggcgg 32 |||||||||||||||| ||||||||||| Sbjct: 125307 ggcgcgttcgggacggtgtacaaggcgg 125334
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Minus Query: 151 cctccgcgcctactacttcagcaaggacgagaagctgctcgtctacga 198 ||||| |||||||| || ||||| ||| |||||||| ||||||||||| Sbjct: 64861 cctcctcgcctacttctacagcagggaggagaagctcctcgtctacga 64814 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 95 gagttccgcgagcgcatcgcggccatcggcgccgt 129 |||||||| || ||| ||||||||||||||||||| Sbjct: 64917 gagttccgggaccgcgtcgcggccatcggcgccgt 64883 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 212 ggcagcctctccgccctcctccacgg 237 ||||||||| |||||||||||||||| Sbjct: 64797 ggcagcctcgccgccctcctccacgg 64772
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Minus Query: 151 cctccgcgcctactacttcagcaaggacgagaagctgctcgtctacga 198 ||||| |||||||| || ||||| ||| |||||||| ||||||||||| Sbjct: 35272 cctcctcgcctacttctacagcagggaggagaagctcctcgtctacga 35225 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 95 gagttccgcgagcgcatcgcggccatcggcgccgt 129 |||||||| || ||| ||||||||||||||||||| Sbjct: 35328 gagttccgggaccgcgtcgcggccatcggcgccgt 35294 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 212 ggcagcctctccgccctcctccacgg 237 ||||||||| |||||||||||||||| Sbjct: 35208 ggcagcctcgccgccctcctccacgg 35183
>dbj|AK105829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E05, full insert sequence Length = 1503 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 5 ggcgcgttcgggacggcgtacaaggcgg 32 |||||||||||||||| ||||||||||| Sbjct: 342 ggcgcgttcgggacggtgtacaaggcgg 369
>dbj|AK068330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145E01, full insert sequence Length = 1864 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 |||||||||||||| |||||| ||| |||||||||| Sbjct: 835 ctgctcgtctacgagtacatggccaagggcagcctc 870
>dbj|AK067208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097F02, full insert sequence Length = 2516 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 5 ggcgcgttcgggacggcgtacaaggcgg 32 |||||||||||||||| ||||||||||| Sbjct: 1238 ggcgcgttcgggacggtgtacaaggcgg 1265
>ref|NM_105511.2| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase AT1G68400 mRNA, complete cds Length = 2405 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 11 ttcgggacggcgtacaaggcggt 33 ||||||||||||||||||||||| Sbjct: 1147 ttcgggacggcgtacaaggcggt 1169
>ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa8195 predicted mRNA Length = 1926 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacga 198 |||||||||||||||||| |||||||| Sbjct: 1209 caaggacgagaagctgcttgtctacga 1235 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 2 aagggcgcgttcgggacggcgtacaaggcggtgatggag 40 |||||||||||||| ||||||||| ||||||| ||||| Sbjct: 1039 aagggcgcgttcggcacggcgtaccgggcggtgctggag 1077
>ref|NM_197136.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0051D19.27), mRNA Length = 1956 Score = 46.1 bits (23), Expect = 0.096 Identities = 38/43 (88%) Strand = Plus / Plus Query: 157 cgcctactacttcagcaaggacgagaagctgctcgtctacgac 199 ||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 1227 cgcctgctacttctccaaggacgagaagctcgtcgtctacgac 1269
>ref|NM_193944.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1923 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 43 cggcgcggcggtggccgtgaagcggctcaag 73 |||||||| |||||||||||||||| ||||| Sbjct: 978 cggcgcggaggtggccgtgaagcggttcaag 1008
>gb|AY693373.1| Musa acuminata putative S-receptor kinase 2 gene, partial cds Length = 531 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 184 gctgctcgtctacgactacatgtccatgggc 214 |||||||||||||||||||||| | |||||| Sbjct: 174 gctgctcgtctacgactacatgcctatgggc 204
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 46.1 bits (23), Expect = 0.096 Identities = 38/43 (88%) Strand = Plus / Minus Query: 157 cgcctactacttcagcaaggacgagaagctgctcgtctacgac 199 ||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 29377 cgcctgctacttctccaaggacgagaagctcgtcgtctacgac 29335
>gb|AY188755.1| Zea mays atypical receptor-like kinase MARK (ark) mRNA, complete cds Length = 2085 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 gtggccgtgaagcggctcaaggacgtg 79 |||||||||||||| |||||||||||| Sbjct: 1255 gtggccgtgaagcgcctcaaggacgtg 1281
>gb|AY102147.1| Arabidopsis thaliana At1g68400/T2E12_5 mRNA, complete cds Length = 2016 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 11 ttcgggacggcgtacaaggcggt 33 ||||||||||||||||||||||| Sbjct: 1117 ttcgggacggcgtacaaggcggt 1139
>dbj|AK221779.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-73-E04 Length = 1569 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 ttcgggacggcgtacaaggcggt 33 ||||||||||||||||||||||| Sbjct: 220 ttcgggacggcgtacaaggcggt 198
>gb|AF378890.1|AF378890 Arabidopsis thaliana At1g68400/T2E12_5 mRNA, complete cds Length = 2290 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 11 ttcgggacggcgtacaaggcggt 33 ||||||||||||||||||||||| Sbjct: 1147 ttcgggacggcgtacaaggcggt 1169
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.096 Identities = 38/43 (88%) Strand = Plus / Plus Query: 157 cgcctactacttcagcaaggacgagaagctgctcgtctacgac 199 ||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 18183751 cgcctgctacttctccaaggacgagaagctcgtcgtctacgac 18183793
>emb|BX813615.1|CNS0ADUC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2159 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 11 ttcgggacggcgtacaaggcggt 33 ||||||||||||||||||||||| Sbjct: 1107 ttcgggacggcgtacaaggcggt 1129
>gb|AC015986.4|AC015986 Arabidopsis thaliana chromosome 1 BAC T2E12 genomic sequence, complete sequence Length = 35229 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 11 ttcgggacggcgtacaaggcggt 33 ||||||||||||||||||||||| Sbjct: 19318 ttcgggacggcgtacaaggcggt 19340
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Minus Query: 2 aagggcgcgttcgggacggcgtacaaggcggtgatggag 40 |||||||||||||| ||||||||| ||||||| ||||| Sbjct: 120079 aagggcgcgttcggcacggcgtaccgggcggtgctggag 120041 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 172 caaggacgagaagctgctcgtctacga 198 |||||||||||||||||| |||||||| Sbjct: 119909 caaggacgagaagctgcttgtctacga 119883
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Minus Query: 2 aagggcgcgttcgggacggcgtacaaggcggtgatggag 40 |||||||||||||| ||||||||| ||||||| ||||| Sbjct: 49988 aagggcgcgttcggcacggcgtaccgggcggtgctggag 49950 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 172 caaggacgagaagctgctcgtctacga 198 |||||||||||||||||| |||||||| Sbjct: 49818 caaggacgagaagctgcttgtctacga 49792
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 186 tgctcgtctacgactacatgtccatgggcagcctc 220 ||||||||||||| |||||| ||| |||||||||| Sbjct: 91075 tgctcgtctacgagtacatggccaggggcagcctc 91041
>dbj|AP003854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0093M23 Length = 134578 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 43 cggcgcggcggtggccgtgaagcggctcaag 73 |||||||| |||||||||||||||| ||||| Sbjct: 25869 cggcgcggaggtggccgtgaagcggttcaag 25899
>dbj|AK110821.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H01, full insert sequence Length = 1730 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacga 198 |||||||||||||||||| |||||||| Sbjct: 763 caaggacgagaagctgcttgtctacga 789 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 2 aagggcgcgttcgggacggcgtacaaggcggtgatggag 40 |||||||||||||| ||||||||| ||||||| ||||| Sbjct: 593 aagggcgcgttcggcacggcgtaccgggcggtgctggag 631
>dbj|AK066978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P22, full insert sequence Length = 2958 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Plus Query: 186 tgctcgtctacgactacatgtccatgggcagcctc 220 ||||||||||||| |||||| ||| |||||||||| Sbjct: 589 tgctcgtctacgagtacatggccaggggcagcctc 623
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.096 Identities = 38/43 (88%) Strand = Plus / Plus Query: 157 cgcctactacttcagcaaggacgagaagctgctcgtctacgac 199 ||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 18193004 cgcctgctacttctccaaggacgagaagctcgtcgtctacgac 18193046
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 ggtggccgtgaagcggctcaaggacg 77 |||||| ||||||||||||||||||| Sbjct: 97432 ggtggcggtgaagcggctcaaggacg 97457
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 ggtggccgtgaagcggctcaaggacg 77 |||||| ||||||||||||||||||| Sbjct: 58501 ggtggcggtgaagcggctcaaggacg 58526
>emb|AM076489.1| Cocos nucifera partial mRNA for receptor-like kinase (CnLI gene) Length = 225 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 ggtggccgtgaagcggctcaaggacg 77 |||||| ||||||||||||||||||| Sbjct: 61 ggtggcggtgaagcggctcaaggacg 86
>ref|XM_475550.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2316 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatg 205 ||||||||||||||||||||| Sbjct: 1474 ctgctcgtctacgactacatg 1494
>ref|NM_184908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 ggcggtggccgtgaagcggctcaag 73 ||||||||||||||||| ||||||| Sbjct: 384 ggcggtggccgtgaagcagctcaag 408
>ref|XM_468446.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1543 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 354 acatcaagtcctccaacgtgctgctcacc 382 |||||||||| || ||||||||||||||| Sbjct: 871 acatcaagtcgtcgaacgtgctgctcacc 899
>ref|XM_507058.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474F11.23 mRNA Length = 1630 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 354 acatcaagtcctccaacgtgctgctcacc 382 |||||||||| || ||||||||||||||| Sbjct: 893 acatcaagtcgtcgaacgtgctgctcacc 921
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatg 205 ||||||||||||||||||||| Sbjct: 57465 ctgctcgtctacgactacatg 57485
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 tcgcggccatcggcgccgtgc 131 ||||||||||||||||||||| Sbjct: 866353 tcgcggccatcggcgccgtgc 866373
>ref|XM_504191.1| Yarrowia lipolytica CLIB122, YALI0E20537g predicted mRNA Length = 1962 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggccgtgaagcggctcaagga 75 ||||||||||||||||||||| Sbjct: 402 ggccgtgaagcggctcaagga 422
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 acatcaagtcctccaacgtgctgctcacc 382 |||||||||| || ||||||||||||||| Sbjct: 32858 acatcaagtcgtcgaacgtgctgctcacc 32830
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 gcggcgcggcggtggccgtgaagcg 66 |||||||||||| |||||||||||| Sbjct: 48226 gcggcgcggcggcggccgtgaagcg 48250
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ctgctcgtctacgactacatg 205 ||||||||||||||||||||| Sbjct: 73234 ctgctcgtctacgactacatg 73214
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 gcggcgcggcggtggccgtgaagcg 66 |||||||||||| |||||||||||| Sbjct: 97737 gcggcgcggcggcggccgtgaagcg 97761
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 acatcaagtcctccaacgtgctgctcacc 382 |||||||||| || ||||||||||||||| Sbjct: 94574 acatcaagtcgtcgaacgtgctgctcacc 94546
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 cgtacaaggcggtgatggaga 41 ||||||||||||||||||||| Sbjct: 88496 cgtacaaggcggtgatggaga 88476
>dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K02, full insert sequence Length = 2511 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatg 205 ||||||||||||||||||||| Sbjct: 1484 ctgctcgtctacgactacatg 1504
>dbj|AK112048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D12, full insert sequence Length = 1630 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 354 acatcaagtcctccaacgtgctgctcacc 382 |||||||||| || ||||||||||||||| Sbjct: 893 acatcaagtcgtcgaacgtgctgctcacc 921
>dbj|AK111011.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-F10, full insert sequence Length = 582 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 gcggcgcggcggtggccgtgaagcg 66 |||||||||||| |||||||||||| Sbjct: 163 gcggcgcggcggcggccgtgaagcg 187
>dbj|AK099147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055C13, full insert sequence Length = 1545 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 354 acatcaagtcctccaacgtgctgctcacc 382 |||||||||| || ||||||||||||||| Sbjct: 872 acatcaagtcgtcgaacgtgctgctcacc 900
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggccgtgaagcggctcaagga 75 ||||||||||||||||||||| Sbjct: 2434753 ggccgtgaagcggctcaagga 2434773
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 ggcggtggccgtgaagcggctcaag 73 ||||||||||||||||| ||||||| Sbjct: 81743 ggcggtggccgtgaagcagctcaag 81719
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2671 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 gtggccgtgaagcggctcaaggac 76 ||||| |||||||||||||||||| Sbjct: 1200 gtggcggtgaagcggctcaaggac 1223
>ref|NM_187871.1| Oryza sativa (japonica cultivar-group), Ozsa8315 predicted mRNA Length = 2697 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 1847 tgctcgtctacgactacatg 1866
>ref|NM_185160.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2284 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 1479 tgctcgtctacgactacatg 1498
>ref|XM_469912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2178 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagcggcgcggcggtggccg 59 |||||||||||||||||||| Sbjct: 582 gagcggcgcggcggtggccg 563
>ref|XM_464764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3722 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 2314 aagctgctcgtctacgagtacatg 2337
>ref|XM_479597.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1062 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 484 aagctgctcgtctacgagtacatg 507
>ref|XM_473281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2040 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 ||||| || |||||||||||||||| ||||||||| Sbjct: 1261 ctgctggtgtacgactacatgtccaacggcagcctc 1296
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcggcgcggcggtggccgtg 61 |||||||||||||||||||| Sbjct: 99701 gcggcgcggcggtggccgtg 99682
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcggcgcggcggtggccgtg 61 |||||||||||||||||||| Sbjct: 4603 gcggcgcggcggtggccgtg 4584
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gagcggcgcggcggtggccg 59 |||||||||||||||||||| Sbjct: 110299 gagcggcgcggcggtggccg 110318
>gb|AC167968.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940121D9, complete sequence Length = 108830 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 cggtgatggagagcggcgcg 49 |||||||||||||||||||| Sbjct: 29137 cggtgatggagagcggcgcg 29156
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gagcggcgcggcggtggccg 59 |||||||||||||||||||| Sbjct: 13503 gagcggcgcggcggtggccg 13522
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 gatcgcgctggcgacggcgcgcgg 309 |||||||||||||||| ||||||| Sbjct: 232625 gatcgcgctggcgacgacgcgcgg 232602
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tcggcgatcgcgctggcgacggcg 304 |||||||||||| ||||||||||| Sbjct: 302558 tcggcgatcgcgttggcgacggcg 302535
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gcatcgcggccatcggcgcc 127 |||||||||||||||||||| Sbjct: 326922 gcatcgcggccatcggcgcc 326941
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 ||||| || |||||||||||||||| ||||||||| Sbjct: 88050 ctgctggtgtacgactacatgtccaacggcagcctc 88085
>emb|AJ002398.1|RSPYPPCL Rhodobacter sphaeroides pyp and pcl genes, and orfA, orfB, orfC, cyt-b like gene, orfE, orfF Length = 6500 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tggagagcggcgcggcggtg 55 |||||||||||||||||||| Sbjct: 6160 tggagagcggcgcggcggtg 6179
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 28 ggcggtgatggagagcggcgcggcggtg 55 ||||||||||||| |||||| ||||||| Sbjct: 722621 ggcggtgatggagcgcggcgtggcggtg 722594
>gb|AC108677.4| Homo sapiens 3 BAC RP11-1P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107650 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggcaacatcaagtcctccaa 369 |||||||||||||||||||| Sbjct: 5239 ggcaacatcaagtcctccaa 5220
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gcgccgtgcagcacgagctggtgg 146 ||||||||||| |||||||||||| Sbjct: 4715738 gcgccgtgcaggacgagctggtgg 4715715
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaggcggtgatggagagcgg 45 |||||||||||||||||||| Sbjct: 3183479 aaggcggtgatggagagcgg 3183498 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 gctggcgacggcgcgcggggtggc 315 |||| ||||||||||||||||||| Sbjct: 2887671 gctgccgacggcgcgcggggtggc 2887648 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 419004 caagggcgagaagctcctcgtcctcgacttcatgcccaatggcagcctctcc 419055
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 360043 caagggcgagaagctcctcgtcctcgacttcatgcccaacggcagcctctcc 360094
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 29126871 aagctgctcgtctacgagtacatg 29126894
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctgggaggcgaggtcggcga 287 |||||||||||||||||||| Sbjct: 7723609 ctgggaggcgaggtcggcga 7723590
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 92355 tgctcgtctacgactacatg 92374
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 158053 tgctcgtctacgactacatg 158034
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 28748 tgctcgtctacgactacatg 28729
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 215 agcctctccgccctcctccacgggaacc 242 ||||| || ||||||||||||||||||| Sbjct: 608539 agcctgtcagccctcctccacgggaacc 608512
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 61989 aagctgctcgtctacgagtacatg 62012
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 74828 aagctgctcgtctacgagtacatg 74851
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 121191 aagctgctcgtctacgagtacatg 121168
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0055N01 Length = 154783 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagagcggcgcggcggtgg 56 |||||||||||||||||||| Sbjct: 46857 ggagagcggcgcggcggtgg 46838
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 gtggccgtgaagcggctcaaggac 76 ||||| |||||||||||||||||| Sbjct: 34306 gtggcggtgaagcggctcaaggac 34283
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full insert sequence Length = 2671 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 gtggccgtgaagcggctcaaggac 76 ||||| |||||||||||||||||| Sbjct: 1200 gtggcggtgaagcggctcaaggac 1223
>dbj|AK111683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164N05, full insert sequence Length = 2227 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 882 aagctgctcgtctacgagtacatg 859
>dbj|AK111620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109J03, full insert sequence Length = 3722 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 2314 aagctgctcgtctacgagtacatg 2337
>dbj|AK111226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-D09, full insert sequence Length = 2493 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gagcggcgcggcggtggccg 59 |||||||||||||||||||| Sbjct: 719 gagcggcgcggcggtggccg 700
>dbj|AK109643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-G09, full insert sequence Length = 1938 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 1730 caagggcgagaagctcctcgtcctcgacttcatgcccaacggcagcctctcc 1781
>dbj|AK107678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-A04, full insert sequence Length = 2366 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 ||||| || |||||||||||||||| ||||||||| Sbjct: 971 ctgctggtgtacgactacatgtccaacggcagcctc 936
>dbj|AK106421.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B03, full insert sequence Length = 1395 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 aagctgctcgtctacgactacatg 205 ||||||||||||||||| |||||| Sbjct: 570 aagctgctcgtctacgagtacatg 593
>dbj|AK102285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I06, full insert sequence Length = 2454 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 185 ctgctcgtctacgactacatgtccatgggcagcctc 220 ||||| || |||||||||||||||| ||||||||| Sbjct: 1476 ctgctggtgtacgactacatgtccaacggcagcctc 1511
>dbj|AK073061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021A01, full insert sequence Length = 2391 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 1411 caagggcgagaagctcctcgtcctcgacttcatgcccaacggcagcctctcc 1462
>dbj|AK071644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107E01, full insert sequence Length = 1597 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 tgctcgtctacgactacatg 205 |||||||||||||||||||| Sbjct: 590 tgctcgtctacgactacatg 609
>dbj|AK066417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067F20, full insert sequence Length = 2500 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tggccgtgaagcggctcaaggacg 77 |||| ||||||||||||||||||| Sbjct: 1154 tggcggtgaagcggctcaaggacg 1177
>gb|DQ184951.1| Malus x domestica putative receptor kinase (DIPM4) mRNA, complete cds Length = 2330 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tggccgtgaagcggctcaaggacg 77 |||| ||||||||||||||||||| Sbjct: 1206 tggcggtgaagcggctcaaggacg 1229
>gb|AY110706.1| Zea mays CL5953_1 mRNA sequence Length = 556 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 347 cacggcaacatcaagtcctccaacgtgctgct 378 ||||| ||||||||||| |||||||| ||||| Sbjct: 237 cacgggaacatcaagtcttccaacgttctgct 268
>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086B08, complete sequence Length = 148274 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcggcgcggcggtggccgtg 61 |||||||||||||||||||| Sbjct: 144217 gcggcgcggcggtggccgtg 144198
>dbj|D50061.1|AFAA6 Alcaligenes xylosoxydans gene for N-acyl-D-amino acids amidohydrolase, complete cds Length = 1467 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gcgagcgcatcgcggccatcggcg 125 ||||||||||||| |||||||||| Sbjct: 92 gcgagcgcatcgccgccatcggcg 115
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cgacggcgtcgcacggcaac 355 |||||||||||||||||||| Sbjct: 1117081 cgacggcgtcgcacggcaac 1117100
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gagcggcgcggcggtggccg 59 |||||||||||||||||||| Sbjct: 2363809 gagcggcgcggcggtggccg 2363828
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 360043 caagggcgagaagctcctcgtcctcgacttcatgcccaacggcagcctctcc 360094
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaggcggtgatggagagcgg 45 |||||||||||||||||||| Sbjct: 3183424 aaggcggtgatggagagcgg 3183443 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 gctggcgacggcgcgcggggtggc 315 |||| ||||||||||||||||||| Sbjct: 2887615 gctgccgacggcgcgcggggtggc 2887592 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 419004 caagggcgagaagctcctcgtcctcgacttcatgcccaatggcagcctctcc 419055
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 gctggcgacggcgcgcggggtggc 315 |||| ||||||||||||||||||| Sbjct: 128431 gctgccgacggcgcgcggggtggc 128454
>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 90756 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaggcggtgatggagagcgg 45 |||||||||||||||||||| Sbjct: 34185 aaggcggtgatggagagcgg 34166
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 152055 caagggcgagaagctcctcgtcctcgacttcatgcccaatggcagcctctcc 152106
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 67361 caagggcgagaagctcctcgtcctcgacttcatgcccaacggcagcctctcc 67412
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 172 caaggacgagaagctgctcgtctacgactacatgtccatgggcagcctctcc 223 ||||| ||||||||| |||||| ||||| |||| ||| |||||||||||| Sbjct: 127768 caagggcgagaagctcctcgtcctcgacttcatgcccaatggcagcctctcc 127717
>gb|M25401.1|BPEBVG B.pertussis bvg locus, bvgA and bvgS genes, complete cds Length = 5996 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 gatcgcgctggcgacggcgcgcgg 309 |||||||||||||||| ||||||| Sbjct: 2288 gatcgcgctggcgacgacgcgcgg 2311 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,501,486 Number of Sequences: 3902068 Number of extensions: 2501486 Number of successful extensions: 62109 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58674 Number of HSP's gapped (non-prelim): 3419 length of query: 441 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 419 effective length of database: 17,147,199,772 effective search space: 7184676704468 effective search space used: 7184676704468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
