ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet93h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EA92_VICFA (P21747) Embryonic abundant protein USP92 precursor 38 0.011
2EA30_VICFA (P21745) Embryonic abundant protein VF30.1 precursor 37 0.014
3RD22_ARATH (Q08298) Dehydration-responsive protein RD22 precursor 37 0.019
4SVF30_VICFA (P09059) Unknown seed protein 30.1 precursor (VF30.1) 36 0.042
5EA87_VICFA (P21746) Embryonic abundant protein USP87 precursor 36 0.042
6PPSA_MYCTU (Q10977) Phenolpthiocerol synthesis polyketide syntha... 31 1.0
7KLK9_HUMAN (Q9UKQ9) Kallikrein-9 precursor (EC 3.4.21.-) (Kallik... 31 1.4
8GID_DEIRA (Q9RXU7) tRNA uridine 5-carboxymethylaminomethyl modif... 29 3.9
9OSP4_PEA (P17771) Organ-specific protein P4 29 5.1
10AMPD2_HUMAN (Q01433) AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase... 28 6.7
11ADA15_RAT (Q9QYV0) ADAM 15 precursor (EC 3.4.24.-) (A disintegri... 28 6.7
12EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 28 8.8

>EA92_VICFA (P21747) Embryonic abundant protein USP92 precursor|
          Length = 268

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 136 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 252
           +L+   +A VG  A  +   YW+S  PNTP+P + S LL
Sbjct: 8   VLSLFCLAFVGITATSSEEDYWQSIWPNTPLPKTFSDLL 46



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>EA30_VICFA (P21745) Embryonic abundant protein VF30.1 precursor|
          Length = 268

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 136 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 252
           +L+   +A VG  A  +   YW+S  PNTP+P + S LL
Sbjct: 8   VLSLFCLAFVGITATSSGEDYWQSIWPNTPLPKTFSDLL 46



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>RD22_ARATH (Q08298) Dehydration-responsive protein RD22 precursor|
          Length = 392

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +1

Query: 118 RLVAAGILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 252
           RL    +L   ++ ++   A   P +YW +ALPNTP+P+SL  LL
Sbjct: 4   RLPLICLLGSFMVVAIA--ADLTPERYWSTALPNTPIPNSLHNLL 46



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>SVF30_VICFA (P09059) Unknown seed protein 30.1 precursor (VF30.1)|
          Length = 268

 Score = 35.8 bits (81), Expect = 0.042
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 136 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQL 249
           +L+   +A VG  A  +   YW+S  PNTP+P + S L
Sbjct: 8   VLSLFCLAFVGITATSSGEDYWQSIWPNTPLPKTFSDL 45



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>EA87_VICFA (P21746) Embryonic abundant protein USP87 precursor|
          Length = 268

 Score = 35.8 bits (81), Expect = 0.042
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 136 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 252
           +L+   +A VG  A      YW+S  PNTP+P + S +L
Sbjct: 8   VLSLFCLAFVGITATSPREDYWQSIWPNTPLPKTFSDML 46



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>PPSA_MYCTU (Q10977) Phenolpthiocerol synthesis polyketide synthase ppsA|
          Length = 1876

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 127 AAGILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLLDTQ 261
           AAGI  F+       H    P Q++E+A P+ P      +++DTQ
Sbjct: 452 AAGIAGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQ 496



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>KLK9_HUMAN (Q9UKQ9) Kallikrein-9 precursor (EC 3.4.21.-) (Kallikrein-like|
           protein 3) (KLK-L3)
          Length = 250

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 175 HGFLPTRSVGRQECRLRRAYPWRAG 101
           HG+  TR++G +ECR   + PW+AG
Sbjct: 16  HGWADTRAIGAEECR-PNSQPWQAG 39



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>GID_DEIRA (Q9RXU7) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gid
          Length = 465

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 420 ADADRSPAGLGAARLHVDADATLAHIDRRAPRHP 319
           ADA R PAG   A   VD DA  AH+  +   HP
Sbjct: 84  ADASRVPAGNALA---VDRDAFSAHVTEQVKNHP 114



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>OSP4_PEA (P17771) Organ-specific protein P4|
          Length = 130

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 136 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLLD 255
           +  FL++A+V S   +  G+YW+  + +  MP  +  LLD
Sbjct: 13  LFLFLIVANVESR--KDVGEYWKLVMKDQDMPEEIQGLLD 50



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>AMPD2_HUMAN (Q01433) AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase isoform L)|
          Length = 879

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 145 RQECRLRRAYPWRAGQRAAMRKLTAGPSQCEDD 47
           R  C L ++ P  AG+R  +     GPS+C  D
Sbjct: 12  RSRCFLHQSLPLGAGRRKGLDVAEPGPSRCRSD 44



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>ADA15_RAT (Q9QYV0) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
           (CRII-7)
          Length = 816

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 135 HSCLPTDRVGRKPC-SSCSGAILGVC-SSQHSH 227
           H C P D +G + C S C G   GVC SS+H H
Sbjct: 646 HRCQPVDLLGAQECRSKCHGH--GVCDSSRHCH 676



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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 320 PWPASTWTPPEPTFTDVPPA 261
           P P+ T++PP PT++  PP+
Sbjct: 276 PQPSPTYSPPPPTYSPPPPS 295


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.132    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,262,036
Number of Sequences: 219361
Number of extensions: 883090
Number of successful extensions: 1999
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1994
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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