ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet93h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
2dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
3dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
4ref|NM_191551.1| Oryza sativa (japonica cultivar-group), predic... 218 1e-53
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
6dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
7dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
8emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chr... 44 0.36
9gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co... 42 1.4
10gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome... 42 1.4
11gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, co... 42 1.4
12gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence 42 1.4
13emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 42 1.4
14gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence 42 1.4
15gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com... 42 1.4
16dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253 42 1.4
17gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com... 42 1.4
18gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.4
19gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome ... 40 5.7
20emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on ch... 40 5.7
21emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 5.7
22gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, comp... 40 5.7
23gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, comp... 40 5.7
24gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Canc... 40 5.7
25gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Can... 40 5.7
26gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cance... 40 5.7
27gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy... 40 5.7
28gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11... 40 5.7
29gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complet... 40 5.7
30gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complet... 40 5.7

>dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E03, full
           insert sequence
          Length = 1617

 Score =  220 bits (111), Expect = 3e-54
 Identities = 266/317 (83%), Gaps = 3/317 (0%)
 Strand = Plus / Plus

                                                                       
Query: 108 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 167
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 71  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 127

                                                                       
Query: 168 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 227
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 128 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 187

                                                                       
Query: 228 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 287
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 188 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 247

                                                                       
Query: 288 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 347
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 248 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 307

                                                                       
Query: 348 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 407
            |||||||||||||||||||| ||||||||||||||   || |||||||||||| || ||
Sbjct: 308 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 367

                            
Query: 408 ggtcggcgtcggcaagg 424
           |||||||||||| ||||
Sbjct: 368 ggtcggcgtcgggaagg 384



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
           ||||| |||||||||||||||||||||||
Sbjct: 588 aagggcggcgtcggcgtcaacgtgaagcc 616



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
           ||||| ||||||||||| |||||| |||| |||  || ||||||||| || || || |||
Sbjct: 519 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 578

                        
Query: 412 ggcgtcggcaagg 424
           |||||||| ||||
Sbjct: 579 ggcgtcgggaagg 591



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
           ||||| ||||| |||||| |||||||   || |||||||||||| || || |||||||||
Sbjct: 456 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 515

                  
Query: 418 ggcaagg 424
           || ||||
Sbjct: 516 ggtaagg 522



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>dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011A15, full
           insert sequence
          Length = 1618

 Score =  220 bits (111), Expect = 3e-54
 Identities = 266/317 (83%), Gaps = 3/317 (0%)
 Strand = Plus / Plus

                                                                       
Query: 108 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 167
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 72  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 128

                                                                       
Query: 168 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 227
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 129 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 188

                                                                       
Query: 228 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 287
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 189 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 248

                                                                       
Query: 288 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 347
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 249 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 308

                                                                       
Query: 348 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 407
            |||||||||||||||||||| ||||||||||||||   || |||||||||||| || ||
Sbjct: 309 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 368

                            
Query: 408 ggtcggcgtcggcaagg 424
           |||||||||||| ||||
Sbjct: 369 ggtcggcgtcgggaagg 385



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
           ||||| |||||||||||||||||||||||
Sbjct: 589 aagggcggcgtcggcgtcaacgtgaagcc 617



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
           ||||| ||||||||||| |||||| |||| |||  || ||||||||| || || || |||
Sbjct: 520 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 579

                        
Query: 412 ggcgtcggcaagg 424
           |||||||| ||||
Sbjct: 580 ggcgtcgggaagg 592



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
           ||||| ||||| |||||| |||||||   || |||||||||||| || || |||||||||
Sbjct: 457 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 516

                  
Query: 418 ggcaagg 424
           || ||||
Sbjct: 517 ggtaagg 523



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>dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F04, full
           insert sequence
          Length = 1616

 Score =  220 bits (111), Expect = 3e-54
 Identities = 266/317 (83%), Gaps = 3/317 (0%)
 Strand = Plus / Plus

                                                                       
Query: 108 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 167
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 63  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 119

                                                                       
Query: 168 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 227
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 120 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 179

                                                                       
Query: 228 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 287
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 180 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 239

                                                                       
Query: 288 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 347
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 240 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 299

                                                                       
Query: 348 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 407
            |||||||||||||||||||| ||||||||||||||   || |||||||||||| || ||
Sbjct: 300 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 359

                            
Query: 408 ggtcggcgtcggcaagg 424
           |||||||||||| ||||
Sbjct: 360 ggtcggcgtcgggaagg 376



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
           ||||| |||||||||||||||||||||||
Sbjct: 580 aagggcggcgtcggcgtcaacgtgaagcc 608



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
           ||||| ||||||||||| |||||| |||| |||  || ||||||||| || || || |||
Sbjct: 511 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 570

                        
Query: 412 ggcgtcggcaagg 424
           |||||||| ||||
Sbjct: 571 ggcgtcgggaagg 583



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
           ||||| ||||| |||||| |||||||   || |||||||||||| || || |||||||||
Sbjct: 448 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 507

                  
Query: 418 ggcaagg 424
           || ||||
Sbjct: 508 ggtaagg 514



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>ref|NM_191551.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1290

 Score =  218 bits (110), Expect = 1e-53
 Identities = 242/286 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 cttgccttcctactgatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatac 198
           |||| ||||||  ||||||| || |||||||||||||| |||||  |||||| |||||||
Sbjct: 25  cttggcttcctgttgatcgcttcagtaggaagccatgccgctcggactccggagcaatac 84

                                                                       
Query: 199 tgggagtctgctcttcccaacactcccatgccaagctccctctctcaactcctcgacacg 258
           ||| | || |||||||||||| ||||||| || ||||| |||||||| || |||  ||| 
Sbjct: 85  tggaaatcagctcttcccaactctcccatcccgagctcgctctctcagcttctcagcact 144

                                                                       
Query: 259 caagccggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccat 318
             || |||||||||||||||||||||||||  |||||||||||||||||||||||| || 
Sbjct: 145 gcaggcggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcac 204

                                                                       
Query: 319 gggatgcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaag 378
           || | ||| || ||||| || || ||||| |||||||||||||||||||| |||||||||
Sbjct: 205 ggcaagcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaag 264

                                                         
Query: 379 cctggcagcgccaagcccggcgggactacggtcggcgtcggcaagg 424
           |||||   || |||||||||||| || |||||||||||||| ||||
Sbjct: 265 cctggttacggcaagcccggcggcaccacggtcggcgtcgggaagg 310



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
           ||||| |||||||||||||||||||||||
Sbjct: 514 aagggcggcgtcggcgtcaacgtgaagcc 542



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
           ||||| ||||||||||| |||||| |||| |||  || ||||||||| || || || |||
Sbjct: 445 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 504

                        
Query: 412 ggcgtcggcaagg 424
           |||||||| ||||
Sbjct: 505 ggcgtcgggaagg 517



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
           ||||| ||||| |||||| |||||||   || |||||||||||| || || |||||||||
Sbjct: 382 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 441

                  
Query: 418 ggcaagg 424
           || ||||
Sbjct: 442 ggtaagg 448



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                            
Query: 264      cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 323
                |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 30584378 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 30584437

                                                                            
Query: 324      gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 383
                ||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 30584438 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 30584497

                                                         
Query: 384      cagcgccaagcccggcgggactacggtcggcgtcggcaagg 424
                   || |||||||||||| || |||||||||||||| ||||
Sbjct: 30584498 ttacggcaagcccggcggcaccacggtcggcgtcgggaagg 30584538



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                            
Query: 153      gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 212
                |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 30583798 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 30583857

                                                 
Query: 213      tcccaacactcccatgccaagctccctctctca 245
                ||||||| ||||||| || ||||| ||||||||
Sbjct: 30583858 tcccaactctcccatcccgagctcgctctctca 30583890



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 352      aagggtggcgtcggcgtcaacgtgaagcc 380
                ||||| |||||||||||||||||||||||
Sbjct: 30584742 aagggcggcgtcggcgtcaacgtgaagcc 30584770



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                            
Query: 352      aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
                ||||| ||||||||||| |||||| |||| |||  || ||||||||| || || || |||
Sbjct: 30584673 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 30584732

                             
Query: 412      ggcgtcggcaagg 424
                |||||||| ||||
Sbjct: 30584733 ggcgtcgggaagg 30584745



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 358      ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
                ||||| ||||| |||||| |||||||   || |||||||||||| || || |||||||||
Sbjct: 30584610 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 30584669

                       
Query: 418      ggcaagg 424
                || ||||
Sbjct: 30584670 ggtaagg 30584676



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>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0036G09
          Length = 124118

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                         
Query: 264   cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 323
             |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 66982 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 67041

                                                                         
Query: 324   gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 383
             ||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 67042 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 67101

                                                      
Query: 384   cagcgccaagcccggcgggactacggtcggcgtcggcaagg 424
                || |||||||||||| || |||||||||||||| ||||
Sbjct: 67102 ttacggcaagcccggcggcaccacggtcggcgtcgggaagg 67142



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 153   gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 212
             |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 66402 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 66461

                                              
Query: 213   tcccaacactcccatgccaagctccctctctca 245
             ||||||| ||||||| || ||||| ||||||||
Sbjct: 66462 tcccaactctcccatcccgagctcgctctctca 66494



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 352   aagggtggcgtcggcgtcaacgtgaagcc 380
             ||||| |||||||||||||||||||||||
Sbjct: 67346 aagggcggcgtcggcgtcaacgtgaagcc 67374



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                         
Query: 352   aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
             ||||| ||||||||||| |||||| |||| |||  || ||||||||| || || || |||
Sbjct: 67277 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 67336

                          
Query: 412   ggcgtcggcaagg 424
             |||||||| ||||
Sbjct: 67337 ggcgtcgggaagg 67349



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 358   ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
             ||||| ||||| |||||| |||||||   || |||||||||||| || || |||||||||
Sbjct: 67214 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 67273

                    
Query: 418   ggcaagg 424
             || ||||
Sbjct: 67274 ggtaagg 67280



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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1060H01
          Length = 157987

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                         
Query: 264   cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 323
             |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 26655 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 26714

                                                                         
Query: 324   gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 383
             ||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 26715 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 26774

                                                      
Query: 384   cagcgccaagcccggcgggactacggtcggcgtcggcaagg 424
                || |||||||||||| || |||||||||||||| ||||
Sbjct: 26775 ttacggcaagcccggcggcaccacggtcggcgtcgggaagg 26815



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 153   gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 212
             |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 26075 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 26134

                                              
Query: 213   tcccaacactcccatgccaagctccctctctca 245
             ||||||| ||||||| || ||||| ||||||||
Sbjct: 26135 tcccaactctcccatcccgagctcgctctctca 26167



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 352   aagggtggcgtcggcgtcaacgtgaagcc 380
             ||||| |||||||||||||||||||||||
Sbjct: 27019 aagggcggcgtcggcgtcaacgtgaagcc 27047



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                         
Query: 352   aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
             ||||| ||||||||||| |||||| |||| |||  || ||||||||| || || || |||
Sbjct: 26950 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 27009

                          
Query: 412   ggcgtcggcaagg 424
             |||||||| ||||
Sbjct: 27010 ggcgtcgggaagg 27022



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 358   ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
             ||||| ||||| |||||| |||||||   || |||||||||||| || || |||||||||
Sbjct: 26887 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 26946

                    
Query: 418   ggcaagg 424
             || ||||
Sbjct: 26947 ggtaagg 26953



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>emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chromosome X, complete
             sequence
          Length = 121936

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 90    gctgccctctgccctgccctcc 111
             ||||||||||||||||||||||
Sbjct: 19015 gctgccctctgccctgccctcc 19036



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>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence
          Length = 198984

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    cctctgccctgccctccatgg 115
             |||||||||||||||||||||
Sbjct: 89203 cctctgccctgccctccatgg 89223



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>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete sequence
          Length = 201483

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     tcctcattgctgccctctgcc 102
              |||||||||||||||||||||
Sbjct: 104523 tcctcattgctgccctctgcc 104503



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>gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, complete sequence
          Length = 154751

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   ccatgccaagctccctctctc 244
             |||||||||||||||||||||
Sbjct: 77707 ccatgccaagctccctctctc 77727



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>gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence
          Length = 146259

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   ccatgccaagctccctctctc 244
             |||||||||||||||||||||
Sbjct: 10116 ccatgccaagctccctctctc 10136



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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 295    ggcgtccatgtcgacgcgggccatg 319
              ||||||||||||| |||||||||||
Sbjct: 275597 ggcgtccatgtcggcgcgggccatg 275621



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>gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
          Length = 165072

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    tgccctctgccctgccctcca 112
             |||||||||||||||||||||
Sbjct: 52191 tgccctctgccctgccctcca 52171



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>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence
          Length = 152722

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    tgccctctgccctgccctcca 112
             |||||||||||||||||||||
Sbjct: 22839 tgccctctgccctgccctcca 22859



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>dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253
          Length = 3174

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 89  tgctgccctctgccctgccct 109
           |||||||||||||||||||||
Sbjct: 187 tgctgccctctgccctgccct 167



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>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence
          Length = 194165

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    cctctgccctgccctccatgg 115
             |||||||||||||||||||||
Sbjct: 97329 cctctgccctgccctccatgg 97309



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 356    gtggcgtcggcgtcaacgtga 376
              |||||||||||||||||||||
Sbjct: 150874 gtggcgtcggcgtcaacgtga 150854



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>gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome 8, complete sequence
          Length = 252334

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    ggggcaatactgggagtctg 208
              ||||||||||||||||||||
Sbjct: 156303 ggggcaatactgggagtctg 156322



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>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3
              Contains the GTF3C5 gene for general transcription factor
              IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester
              lipase (bile salt-stimulated lipase), the CELP gene for
              carboxyl ester lipase pseudogene, the RALGDS gene for ral
              guanine nucleotide dissociation stimulator, the gene for
              Forssman glycolipid synthetase (FS), three novel genes and
              six CpG islands, complete sequence
          Length = 152863

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     tgctgccctctgccctgccc 108
              ||||||||||||||||||||
Sbjct: 119706 tgctgccctctgccctgccc 119725



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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 90     gctgccctctgccctgccctccat 113
              ||||||||| ||||||||||||||
Sbjct: 328111 gctgccctcggccctgccctccat 328088



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>gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, complete sequence
          Length = 176901

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    tgccgtcagcttcctcattg 90
             ||||||||||||||||||||
Sbjct: 73263 tgccgtcagcttcctcattg 73244



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>gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, complete sequence
          Length = 171297

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   tgccgtcagcttcctcattg 90
            ||||||||||||||||||||
Sbjct: 5190 tgccgtcagcttcctcattg 5209



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>gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164595

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     ctgccctctgccctgccctc 110
              ||||||||||||||||||||
Sbjct: 124562 ctgccctctgccctgccctc 124543



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>gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157198

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    ctgccctctgccctgccctc 110
             ||||||||||||||||||||
Sbjct: 60287 ctgccctctgccctgccctc 60306



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  ctgccctctgccctgccctc 110
           ||||||||||||||||||||
Sbjct: 771 ctgccctctgccctgccctc 790



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>gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 121914

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   ctgccctctgccctgccctc 110
            ||||||||||||||||||||
Sbjct: 1275 ctgccctctgccctgccctc 1256



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>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster,
             complete sequence
          Length = 59816

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   ggtgaacgtcggctcgggcg 295
             ||||||||||||||||||||
Sbjct: 42394 ggtgaacgtcggctcgggcg 42413



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>gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11, complete sequence
          Length = 46305

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    tgctgccctctgccctgccc 108
             ||||||||||||||||||||
Sbjct: 44281 tgctgccctctgccctgccc 44262



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>gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complete sequence
          Length = 198162

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ggggcaatactgggagtctg 208
              ||||||||||||||||||||
Sbjct: 160771 ggggcaatactgggagtctg 160752



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>gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complete sequence
          Length = 40203

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    tgctgccctctgccctgccc 108
             ||||||||||||||||||||
Sbjct: 20582 tgctgccctctgccctgccc 20601


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,803,319
Number of Sequences: 3902068
Number of extensions: 2803319
Number of successful extensions: 62323
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62176
Number of HSP's gapped (non-prelim): 140
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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