No.
Definition
Score (bits)
E Value
1 dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clon...
220
3e-54
2 dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clon...
220
3e-54
3 dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clon...
220
3e-54
4 ref|NM_191551.1| Oryza sativa (japonica cultivar-group), predic...
218
1e-53
5 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
161
2e-36
6 dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D...
161
2e-36
7 dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D...
161
2e-36
8 emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chr...
44
0.36
9 gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co...
42
1.4
10 gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome...
42
1.4
11 gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, co...
42
1.4
12 gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence
42
1.4
13 emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ...
42
1.4
14 gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
42
1.4
15 gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com...
42
1.4
16 dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253
42
1.4
17 gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com...
42
1.4
18 gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
42
1.4
19 gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome ...
40
5.7
20 emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on ch...
40
5.7
21 emb|BX640424.1| Bordetella parapertussis strain 12822, complete ...
40
5.7
22 gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, comp...
40
5.7
23 gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, comp...
40
5.7
24 gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Canc...
40
5.7
25 gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Can...
40
5.7
26 gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cance...
40
5.7
27 gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy...
40
5.7
28 gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11...
40
5.7
29 gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complet...
40
5.7
30 gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complet...
40
5.7
>dbj|AK106043.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E03, full
insert sequence
Length = 1617
Score = 220 bits (111), Expect = 3e-54
Identities = 266/317 (83%), Gaps = 3/317 (0%)
Strand = Plus / Plus
Query: 108 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 167
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 71 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 127
Query: 168 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 227
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 128 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 187
Query: 228 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 287
|| ||||| |||||||| || ||| ||| || ||||||||||||||||||||||||
Sbjct: 188 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 247
Query: 288 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 347
| |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 248 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 307
Query: 348 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 407
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 308 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 367
Query: 408 ggtcggcgtcggcaagg 424
|||||||||||| ||||
Sbjct: 368 ggtcggcgtcgggaagg 384
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
||||| |||||||||||||||||||||||
Sbjct: 588 aagggcggcgtcggcgtcaacgtgaagcc 616
Score = 50.1 bits (25), Expect = 0.006
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 519 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 578
Query: 412 ggcgtcggcaagg 424
|||||||| ||||
Sbjct: 579 ggcgtcgggaagg 591
Score = 46.1 bits (23), Expect = 0.092
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 456 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 515
Query: 418 ggcaagg 424
|| ||||
Sbjct: 516 ggtaagg 522
>dbj|AK065358.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013011A15, full
insert sequence
Length = 1618
Score = 220 bits (111), Expect = 3e-54
Identities = 266/317 (83%), Gaps = 3/317 (0%)
Strand = Plus / Plus
Query: 108 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 167
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 72 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 128
Query: 168 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 227
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 129 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 188
Query: 228 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 287
|| ||||| |||||||| || ||| ||| || ||||||||||||||||||||||||
Sbjct: 189 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 248
Query: 288 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 347
| |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 249 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 308
Query: 348 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 407
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 309 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 368
Query: 408 ggtcggcgtcggcaagg 424
|||||||||||| ||||
Sbjct: 369 ggtcggcgtcgggaagg 385
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
||||| |||||||||||||||||||||||
Sbjct: 589 aagggcggcgtcggcgtcaacgtgaagcc 617
Score = 50.1 bits (25), Expect = 0.006
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 520 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 579
Query: 412 ggcgtcggcaagg 424
|||||||| ||||
Sbjct: 580 ggcgtcgggaagg 592
Score = 46.1 bits (23), Expect = 0.092
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 457 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 516
Query: 418 ggcaagg 424
|| ||||
Sbjct: 517 ggtaagg 523
>dbj|AK059056.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F04, full
insert sequence
Length = 1616
Score = 220 bits (111), Expect = 3e-54
Identities = 266/317 (83%), Gaps = 3/317 (0%)
Strand = Plus / Plus
Query: 108 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 167
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 63 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 119
Query: 168 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 227
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 120 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 179
Query: 228 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 287
|| ||||| |||||||| || ||| ||| || ||||||||||||||||||||||||
Sbjct: 180 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 239
Query: 288 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 347
| |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 240 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 299
Query: 348 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 407
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 300 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 359
Query: 408 ggtcggcgtcggcaagg 424
|||||||||||| ||||
Sbjct: 360 ggtcggcgtcgggaagg 376
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
||||| |||||||||||||||||||||||
Sbjct: 580 aagggcggcgtcggcgtcaacgtgaagcc 608
Score = 50.1 bits (25), Expect = 0.006
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 511 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 570
Query: 412 ggcgtcggcaagg 424
|||||||| ||||
Sbjct: 571 ggcgtcgggaagg 583
Score = 46.1 bits (23), Expect = 0.092
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 448 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 507
Query: 418 ggcaagg 424
|| ||||
Sbjct: 508 ggtaagg 514
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 161 bits (81), Expect = 2e-36
Identities = 141/161 (87%)
Strand = Plus / Plus
Query: 264 cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 323
||||||||||||||||||||||||| |||||||||||||||||||||||| || || |
Sbjct: 30584378 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 30584437
Query: 324 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 383
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 30584438 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 30584497
Query: 384 cagcgccaagcccggcgggactacggtcggcgtcggcaagg 424
|| |||||||||||| || |||||||||||||| ||||
Sbjct: 30584498 ttacggcaagcccggcggcaccacggtcggcgtcgggaagg 30584538
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 153 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 212
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 30583798 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 30583857
Query: 213 tcccaacactcccatgccaagctccctctctca 245
||||||| ||||||| || ||||| ||||||||
Sbjct: 30583858 tcccaactctcccatcccgagctcgctctctca 30583890
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
||||| |||||||||||||||||||||||
Sbjct: 30584742 aagggcggcgtcggcgtcaacgtgaagcc 30584770
Score = 50.1 bits (25), Expect = 0.006
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 30584673 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 30584732
Query: 412 ggcgtcggcaagg 424
|||||||| ||||
Sbjct: 30584733 ggcgtcgggaagg 30584745
Score = 46.1 bits (23), Expect = 0.092
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 30584610 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 30584669
Query: 418 ggcaagg 424
|| ||||
Sbjct: 30584670 ggtaagg 30584676
>dbj|AP003309.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBb0036G09
Length = 124118
Score = 161 bits (81), Expect = 2e-36
Identities = 141/161 (87%)
Strand = Plus / Plus
Query: 264 cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 323
||||||||||||||||||||||||| |||||||||||||||||||||||| || || |
Sbjct: 66982 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 67041
Query: 324 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 383
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 67042 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 67101
Query: 384 cagcgccaagcccggcgggactacggtcggcgtcggcaagg 424
|| |||||||||||| || |||||||||||||| ||||
Sbjct: 67102 ttacggcaagcccggcggcaccacggtcggcgtcgggaagg 67142
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 153 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 212
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 66402 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 66461
Query: 213 tcccaacactcccatgccaagctccctctctca 245
||||||| ||||||| || ||||| ||||||||
Sbjct: 66462 tcccaactctcccatcccgagctcgctctctca 66494
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
||||| |||||||||||||||||||||||
Sbjct: 67346 aagggcggcgtcggcgtcaacgtgaagcc 67374
Score = 50.1 bits (25), Expect = 0.006
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 67277 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 67336
Query: 412 ggcgtcggcaagg 424
|||||||| ||||
Sbjct: 67337 ggcgtcgggaagg 67349
Score = 46.1 bits (23), Expect = 0.092
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 67214 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 67273
Query: 418 ggcaagg 424
|| ||||
Sbjct: 67274 ggtaagg 67280
>dbj|AP003560.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1060H01
Length = 157987
Score = 161 bits (81), Expect = 2e-36
Identities = 141/161 (87%)
Strand = Plus / Plus
Query: 264 cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 323
||||||||||||||||||||||||| |||||||||||||||||||||||| || || |
Sbjct: 26655 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 26714
Query: 324 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 383
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 26715 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 26774
Query: 384 cagcgccaagcccggcgggactacggtcggcgtcggcaagg 424
|| |||||||||||| || |||||||||||||| ||||
Sbjct: 26775 ttacggcaagcccggcggcaccacggtcggcgtcgggaagg 26815
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 153 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 212
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 26075 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 26134
Query: 213 tcccaacactcccatgccaagctccctctctca 245
||||||| ||||||| || ||||| ||||||||
Sbjct: 26135 tcccaactctcccatcccgagctcgctctctca 26167
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcc 380
||||| |||||||||||||||||||||||
Sbjct: 27019 aagggcggcgtcggcgtcaacgtgaagcc 27047
Score = 50.1 bits (25), Expect = 0.006
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 352 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 411
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 26950 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 27009
Query: 412 ggcgtcggcaagg 424
|||||||| ||||
Sbjct: 27010 ggcgtcgggaagg 27022
Score = 46.1 bits (23), Expect = 0.092
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 358 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 417
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 26887 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 26946
Query: 418 ggcaagg 424
|| ||||
Sbjct: 26947 ggtaagg 26953
>emb|AL162417.23 | Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3
Contains the GTF3C5 gene for general transcription factor
IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester
lipase (bile salt-stimulated lipase), the CELP gene for
carboxyl ester lipase pseudogene, the RALGDS gene for ral
guanine nucleotide dissociation stimulator, the gene for
Forssman glycolipid synthetase (FS), three novel genes and
six CpG islands, complete sequence
Length = 152863
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tgctgccctctgccctgccc 108
||||||||||||||||||||
Sbjct: 119706 tgctgccctctgccctgccc 119725
>gb|AC001643.1 |AC001643 Genomic sequence from Human 9q34, complete sequence
Length = 40203
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tgctgccctctgccctgccc 108
||||||||||||||||||||
Sbjct: 20582 tgctgccctctgccctgccc 20601
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,803,319
Number of Sequences: 3902068
Number of extensions: 2803319
Number of successful extensions: 62323
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62176
Number of HSP's gapped (non-prelim): 140
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)