ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet93h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1QUTG_EMENI (P25416) Protein qutG 32 0.39
2MOC_ORYSA (Q84MM9) Protein MONOCULM 1 28 5.7

>QUTG_EMENI (P25416) Protein qutG|
          Length = 330

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -1

Query: 337 SSLLRRGADAEAQLDELPSVREPTFPVAPATKTRSCSF 224
           SS L RGA    ++ +LP +R+P+ P  PAT    C F
Sbjct: 142 SSCLNRGAWLN-EMQQLPLIRKPSIPPLPATAPSKCIF 178



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>MOC_ORYSA (Q84MM9) Protein MONOCULM 1|
          Length = 441

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 124 WYPHLRDLRADAEHASGPLPPATRHRGSGAERDT 23
           W P L+ +   A+ A GP  P  R  G+GA+RDT
Sbjct: 171 WPPLLQAIAERADPALGP--PEVRVTGAGADRDT 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,379,016
Number of Sequences: 219361
Number of extensions: 289795
Number of successful extensions: 958
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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