>ref|XM_468550.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1473

 Score =  149 bits (75), Expect = 8e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 ccggccttcaggtccgtcacgacgttcgcgccggccacggtggcgaacctcggcccgggc 306
           ||||||||||  ||||||||| | |||||||| ||||| || || |||||||||||||| 
Sbjct: 174 ccggccttcaactccgtcacggccttcgcgcccgccaccgtcgccaacctcggcccggga 233

                                                                       
Query: 307 ttcgacttcctgggctgcgccgtctccgacgcctcgctctccctcggcgacaccgtgacc 366
           ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 234 ttcgacttcctcggctgcgccgtcgccgacgcctccctctccctcggcgacaccgtcacc 293

                          
Query: 367 gccacgctcgacccc 381
           || || |||||||||
Sbjct: 294 gctaccctcgacccc 308

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  149 bits (75), Expect = 8e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                            
Query: 247      ccggccttcaggtccgtcacgacgttcgcgccggccacggtggcgaacctcggcccgggc 306
                ||||||||||  ||||||||| | |||||||| ||||| || || |||||||||||||| 
Sbjct: 35790864 ccggccttcaactccgtcacggccttcgcgcccgccaccgtcgccaacctcggcccggga 35790923

                                                                            
Query: 307      ttcgacttcctgggctgcgccgtctccgacgcctcgctctccctcggcgacaccgtgacc 366
                ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 35790924 ttcgacttcctcggctgcgccgtcgccgacgcctccctctccctcggcgacaccgtcacc 35790983

                               
Query: 367      gccacgctcgacccc 381
                || || |||||||||
Sbjct: 35790984 gctaccctcgacccc 35790998

>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1149_C12
          Length = 120743

 Score =  149 bits (75), Expect = 8e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                         
Query: 247   ccggccttcaggtccgtcacgacgttcgcgccggccacggtggcgaacctcggcccgggc 306
             ||||||||||  ||||||||| | |||||||| ||||| || || |||||||||||||| 
Sbjct: 61579 ccggccttcaactccgtcacggccttcgcgcccgccaccgtcgccaacctcggcccggga 61638

                                                                         
Query: 307   ttcgacttcctgggctgcgccgtctccgacgcctcgctctccctcggcgacaccgtgacc 366
             ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 61639 ttcgacttcctcggctgcgccgtcgccgacgcctccctctccctcggcgacaccgtcacc 61698

                            
Query: 367   gccacgctcgacccc 381
             || || |||||||||
Sbjct: 61699 gctaccctcgacccc 61713

>dbj|AK060519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-B10, full
           insert sequence
          Length = 1473

 Score =  149 bits (75), Expect = 8e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                       
Query: 247 ccggccttcaggtccgtcacgacgttcgcgccggccacggtggcgaacctcggcccgggc 306
           ||||||||||  ||||||||| | |||||||| ||||| || || |||||||||||||| 
Sbjct: 174 ccggccttcaactccgtcacggccttcgcgcccgccaccgtcgccaacctcggcccggga 233

                                                                       
Query: 307 ttcgacttcctgggctgcgccgtctccgacgcctcgctctccctcggcgacaccgtgacc 366
           ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 234 ttcgacttcctcggctgcgccgtcgccgacgcctccctctccctcggcgacaccgtcacc 293

                          
Query: 367 gccacgctcgacccc 381
           || || |||||||||
Sbjct: 294 gctaccctcgacccc 308

>gb|AC126249.4| Mus musculus BAC clone RP23-412I9 from chromosome 15, complete sequence
          Length = 190037

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 20    ttcagacttctggttgttccca 41
             ||||||||||||||||||||||
Sbjct: 75000 ttcagacttctggttgttccca 74979

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 351     cggcgacaccgtgaccgccacgctcg 376
               |||||||||||||| |||||||||||
Sbjct: 3795661 cggcgacaccgtgatcgccacgctcg 3795636

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 348     cctcggcgacaccgtgaccgcc 369
               ||||||||||||||||||||||
Sbjct: 4775903 cctcggcgacaccgtgaccgcc 4775924

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 301     ccgggcttcgacttcctgggctgcgccgt 329
               |||||||||| ||||||||||| ||||||
Sbjct: 3180176 ccgggcttcgtcttcctgggcttcgccgt 3180204

>gb|AE009065.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 91 of
             256 of the complete sequence
          Length = 11490

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 78    acccacgcgcgcaccggccag 98
             |||||||||||||||||||||
Sbjct: 10077 acccacgcgcgcaccggccag 10097

>ref|NM_010139.2| Mus musculus Eph receptor A2 (Epha2), mRNA
          Length = 3907

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 gcgctgctctccgttcgcgtc 198
           |||||||||||||||||||||
Sbjct: 678 gcgctgctctccgttcgcgtc 698

>gb|AC133204.3| Mus musculus BAC clone RP23-106N3 from chromosome 5, complete sequence
          Length = 224181

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    ttcccaaagcccaagcccaga 56
             |||||||||||||||||||||
Sbjct: 42960 ttcccaaagcccaagcccaga 42940

>gb|AC116567.5| Mus musculus BAC clone RP23-1M9 from 5, complete sequence
          Length = 206570

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     ttcccaaagcccaagcccaga 56
              |||||||||||||||||||||
Sbjct: 118945 ttcccaaagcccaagcccaga 118965

>emb|X78339.1|MMECK M.musculus ECK mRNA
          Length = 3395

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 gcgctgctctccgttcgcgtc 198
           |||||||||||||||||||||
Sbjct: 659 gcgctgctctccgttcgcgtc 679

>dbj|AK144202.1| Mus musculus bone marrow stroma cell CRL-2028 SR-4987 cDNA, RIKEN
           full-length enriched library, clone:G430100L02
           product:Eph receptor A2, full insert sequence
          Length = 3908

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 gcgctgctctccgttcgcgtc 198
           |||||||||||||||||||||
Sbjct: 681 gcgctgctctccgttcgcgtc 701

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 78      acccacgcgcgcaccggccag 98
               |||||||||||||||||||||
Sbjct: 1006462 acccacgcgcgcaccggccag 1006482

>dbj|AK137704.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
           library, clone:9930102G12 product:Eph receptor A2, full
           insert sequence
          Length = 3909

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 gcgctgctctccgttcgcgtc 198
           |||||||||||||||||||||
Sbjct: 679 gcgctgctctccgttcgcgtc 699

>emb|AL607087.10| Mouse DNA sequence from clone RP23-18M1 on chromosome 4, complete
              sequence
          Length = 183786

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 178    gcgctgctctccgttcgcgtc 198
              |||||||||||||||||||||
Sbjct: 166829 gcgctgctctccgttcgcgtc 166849

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    gcggcggcatcggccgaccc 242
              ||||||||||||||||||||
Sbjct: 330744 gcggcggcatcggccgaccc 330725

>ref|NM_111954.2| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase
           AT3G11180 mRNA, complete cds
          Length = 1577

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 cggccttcaggtccgtcacg 267
           ||||||||||||||||||||
Sbjct: 902 cggccttcaggtccgtcacg 921

>gb|AC163636.5| Mus musculus BAC clone RP24-499E13 from chromosome 1, complete sequence
          Length = 173781

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 60     tttccccgaaccccacccacccac 83
              |||||||| |||||||||||||||
Sbjct: 120948 tttccccggaccccacccacccac 120971

>gb|AC121938.3| Mus musculus BAC clone RP24-208D21 from chromosome 6, complete sequence
          Length = 144353

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   ccgtcctccttcccctccacccgc 171
             |||||||||||||||||| |||||
Sbjct: 52448 ccgtcctccttcccctcctcccgc 52425

>gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosome 6, complete sequence
          Length = 143926

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    ccgtcctccttcccctccacccgc 171
              |||||||||||||||||| |||||
Sbjct: 140077 ccgtcctccttcccctcctcccgc 140054

>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete
             sequence
          Length = 101284

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   cggccttcaggtccgtcacg 267
             ||||||||||||||||||||
Sbjct: 10285 cggccttcaggtccgtcacg 10266

>gb|AC092496.3| Bos taurus clone RP42-394P20, complete sequence
          Length = 216538

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    gttgttcccaaagcccaagcccag 55
             |||||||||||||||||| |||||
Sbjct: 23422 gttgttcccaaagcccaatcccag 23445

>gb|BC037094.1| Mus musculus, EH-domain containing 1, clone IMAGE:5343275, mRNA,
           partial cds
          Length = 1988

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 tccggccaccgctccgtcct 154
           ||||||||||||||||||||
Sbjct: 20  tccggccaccgctccgtcct 39

>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 349    ctcggcgacaccgtgaccgccacg 372
              ||||||||||||||||||| ||||
Sbjct: 261193 ctcggcgacaccgtgaccgtcacg 261170

>emb|AL670364.5| Mouse DNA sequence from clone RP23-239H8 on chromosome 11 Contains a
             novel pseudogene, complete sequence
          Length = 136025

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ttcccaaagcccaagcccag 55
             ||||||||||||||||||||
Sbjct: 10950 ttcccaaagcccaagcccag 10969

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     ccgccgcggcggcatcggcc 237
               ||||||||||||||||||||
Sbjct: 1260445 ccgccgcggcggcatcggcc 1260426

>gb|AC130527.4| Mus musculus BAC clone RP23-56C10 from chromosome 1, complete sequence
          Length = 233538

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    tttccccgaaccccacccacccac 83
             |||||||| |||||||||||||||
Sbjct: 39938 tttccccggaccccacccacccac 39961

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     cgccgcggcggcatcggccg 238
               ||||||||||||||||||||
Sbjct: 1609407 cgccgcggcggcatcggccg 1609388

>gb|AC126309.8| Homo sapiens 12 BAC RP11-592O2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121984

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 50    gcccagaccttttccccgaaccccaccc 77
             |||||||||||| ||| |||||||||||
Sbjct: 47242 gcccagacctttcccctgaaccccaccc 47215

>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete
             sequence
          Length = 103517

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   cggccttcaggtccgtcacg 267
             ||||||||||||||||||||
Sbjct: 42995 cggccttcaggtccgtcacg 43014

>gb|AY148490.1| Triticum aestivum LEA1 protein (LEA1) mRNA, complete cds
          Length = 843

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 ctgcgccgtctccgacgcct 340
           ||||||||||||||||||||
Sbjct: 491 ctgcgccgtctccgacgcct 472

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    cctccttcccctccacccgc 171
              ||||||||||||||||||||
Sbjct: 683807 cctccttcccctccacccgc 683788

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 289     gcgaacctcggcccgggcttcgac 312
               |||||||||||||| |||||||||
Sbjct: 1350513 gcgaacctcggccccggcttcgac 1350536

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     tcggcgacaccgtgaccgcc 369
               ||||||||||||||||||||
Sbjct: 1571616 tcggcgacaccgtgaccgcc 1571635

>emb|X56882.1|TA3LEA Wheat mRNA for a group 3 late embryogenesis abundant protein (LEA)
          Length = 934

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 ctgcgccgtctccgacgcct 340
           ||||||||||||||||||||
Sbjct: 492 ctgcgccgtctccgacgcct 473

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    cctccttcccctccacccgc 171
              ||||||||||||||||||||
Sbjct: 354446 cctccttcccctccacccgc 354427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,398,028
Number of Sequences: 3902068
Number of extensions: 2398028
Number of successful extensions: 65815
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64844
Number of HSP's gapped (non-prelim): 971
length of query: 387
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 365
effective length of database: 17,147,199,772
effective search space: 6258727916780
effective search space used: 6258727916780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)