ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet93e07 |
|---|---|
| Clone Library Name | barley_pub |
>ABIL1_ORYSA (Q9AXA6) Probable protein ABIL1 (Abl interactor-like protein 1)| Length = 306 Score = 139 bits (350), Expect = 2e-33 Identities = 69/74 (93%), Positives = 71/74 (95%) Frame = +2 Query: 191 PAPATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAV 370 PAP T DEASMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQK +VLDNLKDYAV Sbjct: 28 PAPTTVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAV 87 Query: 371 RALVNAVDHLGTVA 412 RALVNAVDHLGTVA Sbjct: 88 RALVNAVDHLGTVA 101
>ABIL4_ORYSA (Q6I588) Probable protein ABIL4 (Abl interactor-like protein 4)| Length = 302 Score = 134 bits (336), Expect = 7e-32 Identities = 71/87 (81%), Positives = 75/87 (86%), Gaps = 2/87 (2%) Frame = +2 Query: 158 PSWVAGSDA--ARPAPATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQ 331 PS AG A A P T DEASMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQ Sbjct: 6 PSPAAGGWAGVAGVGPTTVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQ 65 Query: 332 KHIVLDNLKDYAVRALVNAVDHLGTVA 412 K +VL+NLKDYAVRA+VNAVDHLGTVA Sbjct: 66 KQMVLENLKDYAVRAVVNAVDHLGTVA 92
>ABIL1_ARATH (Q8S8M5) Protein ABIL1 (Abl interactor-like protein 1) (AtABIL1)| Length = 298 Score = 127 bits (319), Expect = 6e-30 Identities = 62/70 (88%), Positives = 66/70 (94%) Frame = +2 Query: 203 TFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALV 382 T DE SMER+KSFVKALQELKNLRPQLYSAA+YCEKSYLHSEQK +VLDNLKDY V+ALV Sbjct: 14 TLDEVSMERNKSFVKALQELKNLRPQLYSAADYCEKSYLHSEQKQMVLDNLKDYTVKALV 73 Query: 383 NAVDHLGTVA 412 NAVDHLGTVA Sbjct: 74 NAVDHLGTVA 83
>ABIL3_ARATH (Q6NMC6) Protein ABIL3 (Abl interactor-like protein 3) (AtABIL3)| Length = 321 Score = 90.5 bits (223), Expect = 8e-19 Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 3/79 (3%) Frame = +2 Query: 182 AARPAP---ATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDN 352 A P P + +DE SM++S F +L++LKNLR QLYSAAEY E SY + EQK IV++ Sbjct: 5 ATMPMPREASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQIVVET 64 Query: 353 LKDYAVRALVNAVDHLGTV 409 LKDYA++ALVN VDHLG+V Sbjct: 65 LKDYAIKALVNTVDHLGSV 83
>ABIL2_ARATH (Q9M3A3) Protein ABIL2 (Abl interactor-like protein 2) (AtABIL2)| Length = 312 Score = 87.8 bits (216), Expect = 5e-18 Identities = 43/70 (61%), Positives = 54/70 (77%) Frame = +2 Query: 200 ATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRAL 379 + +DE SM++S F LQ+LKNLR QLYSAAEY E SY ++K IV++ LKDYAV+AL Sbjct: 8 SNYDEVSMQQSMLFSDGLQDLKNLRAQLYSAAEYFELSYTTDDKKQIVVETLKDYAVKAL 67 Query: 380 VNAVDHLGTV 409 VN VDHLG+V Sbjct: 68 VNTVDHLGSV 77
>ABIL4_ARATH (Q9FHY1) Protein ABIL4 (Abl interactor-like protein 4) (AtABIL4)| Length = 279 Score = 77.0 bits (188), Expect = 1e-14 Identities = 37/68 (54%), Positives = 51/68 (75%) Frame = +2 Query: 209 DEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNA 388 DE M+++ F + L++LKNLR QLYSAAEY E SY +E K V++ LK+YA +A+VN Sbjct: 18 DELFMKQTLQFSETLKDLKNLRKQLYSAAEYFETSYGKAEHKETVIETLKEYAAKAVVNT 77 Query: 389 VDHLGTVA 412 VDHLG+V+ Sbjct: 78 VDHLGSVS 85
>ABIL2_ORYSA (Q5JKN2) Putative protein ABIL2 (Abl interactor-like protein 2)| Length = 323 Score = 73.9 bits (180), Expect = 8e-14 Identities = 35/80 (43%), Positives = 54/80 (67%) Frame = +2 Query: 173 GSDAARPAPATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDN 352 G A + +T +E M+ + F +++LK L+ QLYSAAEY E +Y + K V++N Sbjct: 12 GVGIAGMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNN 71 Query: 353 LKDYAVRALVNAVDHLGTVA 412 LK+Y+V+ALVN VDHLG+++ Sbjct: 72 LKEYSVKALVNTVDHLGSIS 91
>ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like protein 3)| Length = 317 Score = 70.5 bits (171), Expect = 9e-13 Identities = 36/73 (49%), Positives = 50/73 (68%) Frame = +2 Query: 194 APATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVR 373 A + D +S++ F +L++L+NLR QLYSAAEY E Y ++ QK V+ +LKDY V Sbjct: 21 ASTSEDMSSLQEGLLFSDSLKDLRNLRSQLYSAAEYFEVFYRNNSQKSTVMTSLKDYTVE 80 Query: 374 ALVNAVDHLGTVA 412 ALV+ VDHLG V+ Sbjct: 81 ALVSTVDHLGFVS 93
>ABIL5_ORYSA (Q5JMF2) Probable protein ABIL5 (Abl interactor-like protein 5)| Length = 254 Score = 62.4 bits (150), Expect = 2e-10 Identities = 29/66 (43%), Positives = 47/66 (71%) Frame = +2 Query: 215 ASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVD 394 +S+ + F AL+ELK+LR QL+ A+ CEK++L +E+K ++L++ K Y A+V +D Sbjct: 30 SSLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVID 89 Query: 395 HLGTVA 412 HLGTV+ Sbjct: 90 HLGTVS 95
>ABI2_MOUSE (P62484) Abl interactor 2 (Abelson interactor 2) (Abi-2)| Length = 446 Score = 32.0 bits (71), Expect = 0.36 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +2 Query: 281 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVA 412 L A+YCE +Y+ S K L+ K Y ++L + + T+A Sbjct: 26 LERVADYCENNYIQSPDKQRALEETKAYTTQSLASVAYLINTLA 69
>ABI2_HUMAN (Q9NYB9) Abl interactor 2 (Abelson interactor 2) (Abi-2)| (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1) Length = 513 Score = 32.0 bits (71), Expect = 0.36 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +2 Query: 281 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVA 412 L A+YCE +Y+ S K L+ K Y ++L + + T+A Sbjct: 26 LERVADYCENNYIQSADKQRALEETKAYTTQSLASVAYLINTLA 69
>RF1_METJA (Q58239) Peptide chain release factor subunit 1 (Translation| termination factor aRF1) Length = 421 Score = 31.6 bits (70), Expect = 0.47 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%) Frame = +2 Query: 155 PPSWVAGSDAARPAPATFDEASME--------RSKSFVKALQELKNLRPQL-----YSAA 295 P + AG +AR D A+ E ++ F+ LQE K LR L ++ Sbjct: 173 PGKFKAGGQSARRLERLIDLAAHEFLQRVGQKANEQFLPLLQE-KKLRGILVGGPGHTKN 231 Query: 296 EYCEKSYLHSEQKHIVLDNL-----KDYAVRALV 382 E+ E YLH E K IVLD +++ +R L+ Sbjct: 232 EFVEGDYLHHELKKIVLDTFDLCYTEEFGIRELL 265
>RF1_METMP (P61731) Peptide chain release factor subunit 1 (Translation| termination factor aRF1) Length = 419 Score = 31.6 bits (70), Expect = 0.47 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 18/100 (18%) Frame = +2 Query: 155 PPSWVAGSDAARPAPATFDEASME--------RSKSFVKALQELKNLRPQLYSAA----- 295 P + AG +AR D+A+ + ++SF+ L+E K L+ L Sbjct: 173 PGKFKAGGQSARRLERLIDDAAHQFMVRIGEYATESFMPILEE-KKLKGLLLGGPGNTKN 231 Query: 296 EYCEKSYLHSEQKHIVLDNL-----KDYAVRALVNAVDHL 400 E+ EK YLH E K ++D +++ +R L++ L Sbjct: 232 EFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLDKASDL 271
>ABI3_MOUSE (Q8BYZ1) ABI gene family member 3 (New molecule including SH3)| (Nesh) Length = 367 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/53 (26%), Positives = 24/53 (45%) Frame = +2 Query: 254 QELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVA 412 + L+ L A YCE +YL + K L+ + +AL + +G +A Sbjct: 20 EALRGNHSALLRVANYCEDNYLQATDKRKALEETMAFTTQALASVAYQVGNLA 72
>ABI1_RAT (Q9QZM5) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Eps8 SH3| domain-binding protein) (Eps8-binding protein) (e3B1) Length = 475 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = +2 Query: 281 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVA 412 L A+YCE +Y+ + K L+ K Y ++L + + +A Sbjct: 25 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALA 68
>ABI1_HUMAN (Q8IZP0) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin| SH3 domain-binding protein 1) (Eps8 SH3 domain-binding protein) (Eps8-binding protein) (e3B1) (Nap1-binding protein) (Nap1BP) (Abl-binding protein 4) (AblBP4) Length = 507 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = +2 Query: 281 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVA 412 L A+YCE +Y+ + K L+ K Y ++L + + +A Sbjct: 25 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALA 68
>ABI1_MOUSE (Q8CBW3) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin| SH3 domain-binding protein 1) (Eps8 SH3 domain-binding protein) (Eps8-binding protein) (e3B1) (Ablphilin-1) Length = 480 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = +2 Query: 281 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVA 412 L A+YCE +Y+ + K L+ K Y ++L + + +A Sbjct: 25 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALA 68
>TDXH1_SULTO (Q974S8) Probable peroxiredoxin 1 (EC 1.11.1.15)| Length = 215 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 155 PPSWVAGSDAARPAPATFDEASM 223 P +W G D P PA FDEA M Sbjct: 167 PANWQPGQDVIVPPPAIFDEAEM 189
>ABI3_HUMAN (Q9P2A4) ABI gene family member 3 (New molecule including SH3)| (Nesh) Length = 366 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/53 (24%), Positives = 25/53 (47%) Frame = +2 Query: 254 QELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVA 412 + L+ L A+YCE +Y+ + K L+ + +AL + +G +A Sbjct: 17 EALRGNHSALLRVADYCEDNYVQATDKRKALEETMAFTTQALASVAYQVGNLA 69
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +2 Query: 212 EASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVL 346 E + RS +++ L + K +PQL+S E K LHS+ K VL Sbjct: 353 EVDISRSDAWLLGLNDGKCAQPQLHSKEEMGIKKNLHSQIKQNVL 397
>MATK_CHAGO (Q7YKY4) Maturase K (Intron maturase)| Length = 516 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 227 RSKSFVKALQELKNLRPQLYSAAEYCEKSYL 319 R KSF+ L+ + NL+ +L A YC+K +L Sbjct: 172 RDKSFLHLLKNIFNLKKELLIEAFYCDKFHL 202
>GLND_BRUSU (Q8G312) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 934 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +2 Query: 251 LQELKN---LRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHL 400 L+E+ N LR +L A+ ++SY + +VL LKD NA D L Sbjct: 8 LEEIVNAETLRRKLNELADTADESYTSLPMRKVVLQTLKDALASGRANAEDML 60
>GLND_BRUME (Q8YES3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 934 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +2 Query: 251 LQELKN---LRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHL 400 L+E+ N LR +L A+ ++SY + +VL LKD NA D L Sbjct: 8 LEEIVNAETLRRKLNELADTADESYTSLPMRKVVLQTLKDALASGRANAEDML 60
>GLND_BRUAB (Q57FN0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 934 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +2 Query: 251 LQELKN---LRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHL 400 L+E+ N LR +L A+ ++SY + +VL LKD NA D L Sbjct: 8 LEEIVNAETLRRKLNELADTADESYTSLPMRKVVLQTLKDALASGRANAEDML 60
>GLND_BRUA2 (Q2YNZ1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 934 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +2 Query: 251 LQELKN---LRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHL 400 L+E+ N LR +L A+ ++SY + +VL LKD NA D L Sbjct: 8 LEEIVNAETLRRKLNELADTADESYTSLPMRKVVLQTLKDALASGRANAEDML 60
>HBB_NOTAN (P29628) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 290 AAEYCEKSYLHSEQKHIVLDNLK 358 AA Y E S LHSE+ H+ DN K Sbjct: 82 AATYAELSILHSEKLHVDPDNFK 104
>MATK_CHACO (Q7YKY5) Maturase K (Intron maturase)| Length = 516 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 227 RSKSFVKALQELKNLRPQLYSAAEYCEKSYL 319 R KSF+ L+ + NL+ +L YC+K +L Sbjct: 172 RDKSFLNLLKNIFNLKKELLIEGFYCDKFHL 202
>ALP14_SCHPO (O94534) Spindle pole body component alp14 (Altered polarity| protein 14) Length = 809 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +2 Query: 200 ATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHS 325 A D + S SF ++++E + RP+LYS+ + ++S L S Sbjct: 710 ANTDFLELSTSPSFQRSVREFEPTRPKLYSSIDVNQRSPLAS 751
>TDXH2_SULME (O33665) Probable peroxiredoxin 2 (EC 1.11.1.15)| Length = 214 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 155 PPSWVAGSDAARPAPATFDEASM 223 P +W G D P P FDEA+M Sbjct: 166 PANWEPGQDVIVPPPNVFDEATM 188
>S14L2_BOVIN (P58875) SEC14-like protein 2 (Alpha-tocopherol-associated protein)| (TAP) (bTAP) (Fragment) Length = 387 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 289 RRGVLREVVPPQRAEAYRAGQLEGLCCQGPG 381 R G +REV+P QR A+ + L C PG Sbjct: 329 RAGEMREVLPSQRYSAHLVPEDGSLTCSDPG 359
>HBB1_GOBGI (P83612) Hemoglobin beta-1 subunit (Hemoglobin beta-1 chain)| (Beta-1-globin) Length = 146 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 290 AAEYCEKSYLHSEQKHIVLDNLK 358 AA Y E S LHSE+ H+ DN K Sbjct: 82 AATYAELSTLHSEKLHVDPDNFK 104
>NDPA_MANSM (Q65R92) Nucleoid-associated protein ndpA| Length = 355 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Frame = +2 Query: 239 FVKALQELKNLRPQ------LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHL 400 F+ L + L PQ L + ++YC+K L +EQ V + DY + +NA D + Sbjct: 202 FMDFLGADEGLNPQVQNQCLLQAVSDYCQKGELSAEQSQAVKKQVFDYC-KGQINAGDEI 260
>SYI_STRR6 (Q8DNW4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 930 Score = 27.3 bits (59), Expect = 8.8 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 230 SKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGT 406 ++ FV A + L +L + A ++Y E HIV ++ D AV LV DH+ T Sbjct: 260 ARKFVVAAELLTSLSEKFGWADVQVLETYRGQELNHIVTEHPWDTAVEELVILGDHVTT 318
>SYI_STRPN (Q9ZHB3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 930 Score = 27.3 bits (59), Expect = 8.8 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 230 SKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGT 406 ++ FV A + L +L + A ++Y E HIV ++ D AV LV DH+ T Sbjct: 260 ARKFVVAAELLTSLSEKFGWADVQVLETYRGQELNHIVTEHPWDTAVEELVILGDHVTT 318
>REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP)| Length = 595 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/90 (22%), Positives = 38/90 (42%) Frame = +2 Query: 65 ASPLPTPLRCHRRQERAEDAMXXXXXXXXAPPSWVAGSDAARPAPATFDEASMERSKSFV 244 A LP L + +D + A S + + A + +FDE+ E + F+ Sbjct: 222 AEVLPKVLSSESHNDDQQDDVSNLIQEAAAKASHII-NPATQSNGKSFDESEEEALEQFI 280 Query: 245 KALQELKNLRPQLYSAAEYCEKSYLHSEQK 334 K Q+++ L S + CE+ + + +K Sbjct: 281 KEYQKIRGL-----SRRQICERIWSNERRK 305
>FZO1_YEAST (P38297) Transmembrane GTPase FZO1 (EC 3.6.5.-)| Length = 855 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = +2 Query: 218 SMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLD 349 S+ ++++F+ LQE N+RP +A + E+ LH Q +I LD Sbjct: 102 SILKTQAFMDQLQEENNIRPIFIAAND--EREKLHVLQLNIKLD 143
>RPOA2_PYRFU (Q8U0M5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Frame = +2 Query: 230 SKSFVKALQELK------NLRPQLYSAAE-YCEKSYLHSEQKHIVLDNLKDYAVRALVNA 388 S S +K+L E K N++ +LY + Y EK L + ++D++ RALV Sbjct: 3 SLSTIKSLIEKKGANLPENVKSELYEKLKKYNEKYKLTKAEIEAIIDDVVKEYERALVEP 62 Query: 389 VDHLGTVA 412 + +GTVA Sbjct: 63 GEPVGTVA 70
>ZN409_HUMAN (Q9UPU6) Zinc finger protein 409| Length = 862 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +2 Query: 155 PPSWVAGSDAARPAPATFDEASMERSKSFVKALQELKNLR-PQLYSAAEYCEKSYLHSEQ 331 PP +D PAPA F S+ S + + K L+ P+ +Y + +H ++ Sbjct: 415 PPQPYRLADDYTPAPAAFQGLSLSSHMSLLHSRNSCKTLKCPKCNWHYKYQQTLDVHMQE 474 Query: 332 KH 337 KH Sbjct: 475 KH 476 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,123,428 Number of Sequences: 219361 Number of extensions: 595192 Number of successful extensions: 2265 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2264 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
