ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet93e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192860.1| Oryza sativa (japonica cultivar-group), predic... 307 2e-80
2dbj|AK102399.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
3dbj|AK064316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
4gb|AY108884.1| Zea mays PCO064378 mRNA sequence 278 1e-71
5ref|XM_475970.1| Oryza sativa (japonica cultivar-group), predic... 216 4e-53
6dbj|AK067538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 4e-53
7gb|AY107908.1| Zea mays PCO098717 mRNA sequence 161 2e-36
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
9dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
10gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 117 3e-23
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
12ref|NM_130185.2| Arabidopsis thaliana ABI1L1 AT2G46225 (ABI1L1) ... 52 0.001
13emb|BX820174.1|CNS0A8HE Arabidopsis thaliana Full-length cDNA Co... 52 0.001
14gb|AY085146.1| Arabidopsis thaliana clone 13319 mRNA, complete s... 52 0.001
15dbj|AK118876.1| Arabidopsis thaliana At2g46225 mRNA for unknown ... 52 0.001
16gb|AY817012.1| Arabidopsis thaliana Abl interactor-like protein-... 52 0.001
17ref|XM_463672.1| Oryza sativa (japonica cultivar-group), predic... 44 0.35
18dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
19dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.35
21dbj|AK068446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
22dbj|AK067450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
23dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
24ref|XM_479406.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
25gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome... 40 5.5
26gb|AC073530.18| Homo sapiens 12 BAC RP11-123O10 (Roswell Park Ca... 40 5.5
27ref|XM_682418.1| PREDICTED: Danio rerio similar to Smad4 type1 (... 40 5.5
28emb|BX537350.25| Zebrafish DNA sequence from clone CH211-257F16 ... 40 5.5
29emb|BX511312.6| Zebrafish DNA sequence from clone DKEY-76K14 in ... 40 5.5
30dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
31gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, r... 40 5.5
32dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
33dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
34dbj|AK103870.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
35dbj|AK058967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
36gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68... 40 5.5 
>ref|NM_192860.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 921

 Score =  307 bits (155), Expect = 2e-80
 Identities = 203/219 (92%)
 Strand = Plus / Plus

                                                                       
Query: 194 gctcccgccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 253
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  gctcccaccaccgtcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 144

                                                                       
Query: 254 caggagctcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcg 313
           |||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||
Sbjct: 145 caggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtcg 204

                                                                       
Query: 314 tacctccacagcgagcagaagcatatcgtgctggacaacttgaaggattatgctgtcagg 373
           ||||||||||||||||||||||| || || || ||||||||||||||||||||||| |||
Sbjct: 205 tacctccacagcgagcagaagcagatggttctagacaacttgaaggattatgctgtgagg 264

                                                  
Query: 374 gccctggttaacgcggtcgaccaccttggcacagttgcc 412
           ||  |||| || ||||| |||||||||||||||||||||
Sbjct: 265 gctttggtgaatgcggttgaccaccttggcacagttgcc 303
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>dbj|AK102399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092I23, full
           insert sequence
          Length = 1652

 Score =  307 bits (155), Expect = 2e-80
 Identities = 203/219 (92%)
 Strand = Plus / Plus

                                                                       
Query: 194 gctcccgccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 253
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gctcccaccaccgtcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 584

                                                                       
Query: 254 caggagctcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcg 313
           |||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||
Sbjct: 585 caggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtcg 644

                                                                       
Query: 314 tacctccacagcgagcagaagcatatcgtgctggacaacttgaaggattatgctgtcagg 373
           ||||||||||||||||||||||| || || || ||||||||||||||||||||||| |||
Sbjct: 645 tacctccacagcgagcagaagcagatggttctagacaacttgaaggattatgctgtgagg 704

                                                  
Query: 374 gccctggttaacgcggtcgaccaccttggcacagttgcc 412
           ||  |||| || ||||| |||||||||||||||||||||
Sbjct: 705 gctttggtgaatgcggttgaccaccttggcacagttgcc 743
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>dbj|AK064316.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-C12, full
           insert sequence
          Length = 1590

 Score =  307 bits (155), Expect = 2e-80
 Identities = 203/219 (92%)
 Strand = Plus / Plus

                                                                       
Query: 194 gctcccgccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 253
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcccaccaccgtcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 500

                                                                       
Query: 254 caggagctcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcg 313
           |||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||
Sbjct: 501 caggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtcg 560

                                                                       
Query: 314 tacctccacagcgagcagaagcatatcgtgctggacaacttgaaggattatgctgtcagg 373
           ||||||||||||||||||||||| || || || ||||||||||||||||||||||| |||
Sbjct: 561 tacctccacagcgagcagaagcagatggttctagacaacttgaaggattatgctgtgagg 620

                                                  
Query: 374 gccctggttaacgcggtcgaccaccttggcacagttgcc 412
           ||  |||| || ||||| |||||||||||||||||||||
Sbjct: 621 gctttggtgaatgcggttgaccaccttggcacagttgcc 659
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>gb|AY108884.1| Zea mays PCO064378 mRNA sequence
          Length = 1261

 Score =  278 bits (140), Expect = 1e-71
 Identities = 200/220 (90%)
 Strand = Plus / Plus

                                                                       
Query: 189 gccctgctcccgccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaagg 248
           ||||||||||| ||||| |||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 175 gccctgctcccaccaccgtcgacgaggcatccatggagcggagcatgagcttcgtcaagg 234

                                                                       
Query: 249 cgctccaggagctcaagaacctgcgcccgcagctctactccgccgcggagtactgcgaga 308
           |||| ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 235 cgcttcaggagctcaagaacctgcgcccgcagctctactcggcctccgagtactgcgaga 294

                                                                       
Query: 309 agtcgtacctccacagcgagcagaagcatatcgtgctggacaacttgaaggattatgctg 368
           |||| ||||||| |||||| ||||||||  | |||||||||||| |||| ||||| ||||
Sbjct: 295 agtcctacctccgcagcgaacagaagcaagtggtgctggacaacatgaaagattacgctg 354

                                                   
Query: 369 tcagggccctggttaacgcggtcgaccaccttggcacagt 408
           ||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 355 tcagggccctggtcaacgctgtcgaccatcttggcacagt 394
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>ref|XM_475970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 909

 Score =  216 bits (109), Expect = 4e-53
 Identities = 154/169 (91%)
 Strand = Plus / Plus

                                                                       
Query: 201 ccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagc 260
           ||||| |||||||||| |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 65  ccaccgtcgacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcaggagc 124

                                                                       
Query: 261 tcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcgtacctcc 320
           ||||||||||||| || ||||||||||||||| | |||||||||||||| || |||||||
Sbjct: 125 tcaagaacctgcggcctcagctctactccgcctccgagtactgcgagaaatcctacctcc 184

                                                            
Query: 321 acagcgagcagaagcatatcgtgctggacaacttgaaggattatgctgt 369
           |||||||||||||||| || |||||||| ||| |||| |||||||||||
Sbjct: 185 acagcgagcagaagcagatggtgctggaaaacctgaaagattatgctgt 233
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>dbj|AK067538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110G24, full
           insert sequence
          Length = 1227

 Score =  216 bits (109), Expect = 4e-53
 Identities = 154/169 (91%)
 Strand = Plus / Plus

                                                                       
Query: 201 ccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagc 260
           ||||| |||||||||| |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 209 ccaccgtcgacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcaggagc 268

                                                                       
Query: 261 tcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcgtacctcc 320
           ||||||||||||| || ||||||||||||||| | |||||||||||||| || |||||||
Sbjct: 269 tcaagaacctgcggcctcagctctactccgcctccgagtactgcgagaaatcctacctcc 328

                                                            
Query: 321 acagcgagcagaagcatatcgtgctggacaacttgaaggattatgctgt 369
           |||||||||||||||| || |||||||| ||| |||| |||||||||||
Sbjct: 329 acagcgagcagaagcagatggtgctggaaaacctgaaagattatgctgt 377
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>gb|AY107908.1| Zea mays PCO098717 mRNA sequence
          Length = 1060

 Score =  161 bits (81), Expect = 2e-36
 Identities = 123/137 (89%)
 Strand = Plus / Plus

                                                                       
Query: 230 agcaagagcttcgtcaaggcgctccaggagctcaagaacctgcgcccgcagctctactcc 289
           |||||||||||| ||||||| || |||||||||||||||||||| |||||||||||| ||
Sbjct: 14  agcaagagcttcatcaaggccctgcaggagctcaagaacctgcggccgcagctctacacc 73

                                                                       
Query: 290 gccgcggagtactgcgagaagtcgtacctccacagcgagcagaagcatatcgtgctggac 349
           ||| | ||||||||||||||||| ||||||||||||||||||||||| |  |||||||||
Sbjct: 74  gcctccgagtactgcgagaagtcctacctccacagcgagcagaagcagaaggtgctggac 133

                            
Query: 350 aacttgaaggattatgc 366
           ||| |||| || |||||
Sbjct: 134 aacctgaaagactatgc 150
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 5e-28
 Identities = 79/83 (95%)
 Strand = Plus / Minus

                                                                            
Query: 254      caggagctcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcg 313
                |||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||
Sbjct: 24842230 caggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtcg 24842171

                                       
Query: 314      tacctccacagcgagcagaagca 336
                |||||||||||||||||||||||
Sbjct: 24842170 tacctccacagcgagcagaagca 24842148



 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                            
Query: 194      gctcccgccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 253
                |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24842420 gctcccaccaccgtcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 24842361

                    
Query: 254      cagg 257
                ||||
Sbjct: 24842360 cagg 24842357



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                            
Query: 347      gacaacttgaaggattatgctgtcagggccctggttaacgcggtcgaccaccttggcaca 406
                ||||||||||||||||||||||| |||||  |||| || ||||| |||||||||||||||
Sbjct: 24841498 gacaacttgaaggattatgctgtgagggctttggtgaatgcggttgaccaccttggcaca 24841439

                      
Query: 407      gttgcc 412
                ||||||
Sbjct: 24841438 gttgcc 24841433



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 181      cgccgcccgccctgctcccgcc 202
                ||||||||||||||||||||||
Sbjct: 40565677 cgccgcccgccctgctcccgcc 40565656
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>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0501G01
          Length = 154561

 Score =  133 bits (67), Expect = 5e-28
 Identities = 79/83 (95%)
 Strand = Plus / Minus

                                                                         
Query: 254   caggagctcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcg 313
             |||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||
Sbjct: 65350 caggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtcg 65291

                                    
Query: 314   tacctccacagcgagcagaagca 336
             |||||||||||||||||||||||
Sbjct: 65290 tacctccacagcgagcagaagca 65268



 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                         
Query: 194   gctcccgccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 253
             |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65540 gctcccaccaccgtcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctc 65481

                 
Query: 254   cagg 257
             ||||
Sbjct: 65480 cagg 65477



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                         
Query: 347   gacaacttgaaggattatgctgtcagggccctggttaacgcggtcgaccaccttggcaca 406
             ||||||||||||||||||||||| |||||  |||| || ||||| |||||||||||||||
Sbjct: 64618 gacaacttgaaggattatgctgtgagggctttggtgaatgcggttgaccaccttggcaca 64559

                   
Query: 407   gttgcc 412
             ||||||
Sbjct: 64558 gttgcc 64553
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>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009C07, complete sequence
          Length = 148731

 Score =  117 bits (59), Expect = 3e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                         
Query: 254   caggagctcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcg 313
             |||||||||||||||||||| || ||||||||||||||| | |||||||||||||| || 
Sbjct: 71825 caggagctcaagaacctgcggcctcagctctactccgcctccgagtactgcgagaaatcc 71884

                                    
Query: 314   tacctccacagcgagcagaagca 336
             |||||||||||||||||||||||
Sbjct: 71885 tacctccacagcgagcagaagca 71907



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                              
Query: 201   ccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggc 249
             ||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 71638 ccaccgtcgacgaggcctccatggagcggagcaagagcttcgtcaaggc 71686
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  117 bits (59), Expect = 3e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                            
Query: 254      caggagctcaagaacctgcgcccgcagctctactccgccgcggagtactgcgagaagtcg 313
                |||||||||||||||||||| || ||||||||||||||| | |||||||||||||| || 
Sbjct: 28917532 caggagctcaagaacctgcggcctcagctctactccgcctccgagtactgcgagaaatcc 28917591

                                       
Query: 314      tacctccacagcgagcagaagca 336
                |||||||||||||||||||||||
Sbjct: 28917592 tacctccacagcgagcagaagca 28917614



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                                 
Query: 201      ccaccttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggc 249
                ||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 28917345 ccaccgtcgacgaggcctccatggagcggagcaagagcttcgtcaaggc 28917393
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>ref|NM_130185.2| Arabidopsis thaliana ABI1L1 AT2G46225 (ABI1L1) mRNA, complete cds
          Length = 1276

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 accttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctc 262
           ||||| |||||||  |||||||| || | |||||||||||| |||||  | |||||||||
Sbjct: 217 accttggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctc 276

                 
Query: 263 aagaac 268
           ||||||
Sbjct: 277 aagaac 282
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>emb|BX820174.1|CNS0A8HE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS87ZD02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1225

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 accttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctc 262
           ||||| |||||||  |||||||| || | |||||||||||| |||||  | |||||||||
Sbjct: 172 accttggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctc 231

                 
Query: 263 aagaac 268
           ||||||
Sbjct: 232 aagaac 237
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>gb|AY085146.1| Arabidopsis thaliana clone 13319 mRNA, complete sequence
          Length = 1263

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 accttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctc 262
           ||||| |||||||  |||||||| || | |||||||||||| |||||  | |||||||||
Sbjct: 207 accttggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctc 266

                 
Query: 263 aagaac 268
           ||||||
Sbjct: 267 aagaac 272
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>dbj|AK118876.1| Arabidopsis thaliana At2g46225 mRNA for unknown protein, complete
           cds, clone: RAFL21-20-O20
          Length = 1220

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 accttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctc 262
           ||||| |||||||  |||||||| || | |||||||||||| |||||  | |||||||||
Sbjct: 217 accttggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctc 276

                 
Query: 263 aagaac 268
           ||||||
Sbjct: 277 aagaac 282
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>gb|AY817012.1| Arabidopsis thaliana Abl interactor-like protein-1 (ABIL1) mRNA,
           complete cds
          Length = 897

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 accttcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctc 262
           ||||| |||||||  |||||||| || | |||||||||||| |||||  | |||||||||
Sbjct: 40  accttggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctc 99

                 
Query: 263 aagaac 268
           ||||||
Sbjct: 100 aagaac 105
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>ref|XM_463672.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 181 cgccgcccgccctgctcccgcc 202
           ||||||||||||||||||||||
Sbjct: 382 cgccgcccgccctgctcccgcc 361
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0093F16
          Length = 160925

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 181  cgccgcccgccctgctcccgcc 202
            ||||||||||||||||||||||
Sbjct: 7655 cgccgcccgccctgctcccgcc 7634
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>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1033B05
          Length = 138882

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 181    cgccgcccgccctgctcccgcc 202
              ||||||||||||||||||||||
Sbjct: 127301 cgccgcccgccctgctcccgcc 127280
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 247     ggcgctccaggagctcaagaacctgc 272
               |||||||||||||||| |||||||||
Sbjct: 3276791 ggcgctccaggagctcgagaacctgc 3276766
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>dbj|AK068446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153H06, full
           insert sequence
          Length = 904

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 181 cgccgcccgccctgctcccgcc 202
           ||||||||||||||||||||||
Sbjct: 405 cgccgcccgccctgctcccgcc 384
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>dbj|AK067450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106M04, full
           insert sequence
          Length = 1059

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 181 cgccgcccgccctgctcccgcc 202
           ||||||||||||||||||||||
Sbjct: 405 cgccgcccgccctgctcccgcc 384
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>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 181   cgccgcccgccctgctcccgcc 202
             ||||||||||||||||||||||
Sbjct: 45692 cgccgcccgccctgctcccgcc 45671
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>ref|XM_479406.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3125

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  tcgacgaggcgtccatggag 226
            ||||||||||||||||||||
Sbjct: 2604 tcgacgaggcgtccatggag 2585
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>gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome 7, complete sequence
          Length = 225829

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   acagcgagcagaagcatatc 340
             ||||||||||||||||||||
Sbjct: 61638 acagcgagcagaagcatatc 61619
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>gb|AC073530.18| Homo sapiens 12 BAC RP11-123O10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 156390

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ccaggagctcaagaacctgc 272
             ||||||||||||||||||||
Sbjct: 62731 ccaggagctcaagaacctgc 62750
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>ref|XM_682418.1| PREDICTED: Danio rerio similar to Smad4 type1 (LOC559111), partial
           mRNA
          Length = 1261

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 cgcccgccctgctcccgcca 203
           ||||||||||||||||||||
Sbjct: 947 cgcccgccctgctcccgcca 966
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>emb|BX537350.25| Zebrafish DNA sequence from clone CH211-257F16 in linkage group 1,
            complete sequence
          Length = 186493

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 14   acagcagacgcgaatcgcattcgc 37
            ||||||||||||||| ||||||||
Sbjct: 7417 acagcagacgcgaatggcattcgc 7440
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>emb|BX511312.6| Zebrafish DNA sequence from clone DKEY-76K14 in linkage group 15,
             complete sequence
          Length = 40687

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    acagcagacgcgaatcgcattcgc 37
             ||||||||||||||| ||||||||
Sbjct: 13096 acagcagacgcgaatggcattcgc 13073
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 207      tcgacgaggcgtccatggag 226
                ||||||||||||||||||||
Sbjct: 27668430 tcgacgaggcgtccatggag 27668411
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>gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, region 59D2-59D3, BAC clone
             BACR04G19, complete sequence
          Length = 181955

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    cccgcttcccactccgctcc 89
             ||||||||||||||||||||
Sbjct: 85012 cccgcttcccactccgctcc 85031
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>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0047B07
          Length = 157797

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tcgacgaggcgtccatggag 226
              ||||||||||||||||||||
Sbjct: 125423 tcgacgaggcgtccatggag 125404
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>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1477_F01
          Length = 158792

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tcgacgaggcgtccatggag 226
             ||||||||||||||||||||
Sbjct: 47532 tcgacgaggcgtccatggag 47513
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>dbj|AK103870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149H24, full
            insert sequence
          Length = 3125

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  tcgacgaggcgtccatggag 226
            ||||||||||||||||||||
Sbjct: 2604 tcgacgaggcgtccatggag 2585
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>dbj|AK058967.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-C09, full
            insert sequence
          Length = 1736

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  tcgacgaggcgtccatggag 226
            ||||||||||||||||||||
Sbjct: 1197 tcgacgaggcgtccatggag 1178
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>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete
              sequence
          Length = 299331

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     cccgcttcccactccgctcc 89
              ||||||||||||||||||||
Sbjct: 137489 cccgcttcccactccgctcc 137508


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,462,319
Number of Sequences: 3902068
Number of extensions: 2462319
Number of successful extensions: 137858
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137601
Number of HSP's gapped (non-prelim): 257
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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