ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet93e02 |
|---|---|
| Clone Library Name | barley_pub |
>UPP_TOBAC (P93394) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP| pyrophosphorylase) (UPRTase) Length = 224 Score = 64.3 bits (155), Expect = 1e-10 Identities = 27/31 (87%), Positives = 29/31 (93%) Frame = +3 Query: 318 SGGQMLVFVPPHPLIKHWVSVLRNEQTPCAV 410 SG +MLVFVPPHPLIKHWVSVLRNEQTPC + Sbjct: 9 SGNRMLVFVPPHPLIKHWVSVLRNEQTPCPI 39
>UPP_SYNP6 (Q5MZF4) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP| pyrophosphorylase) (UPRTase) Length = 217 Score = 43.9 bits (102), Expect = 2e-04 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = +3 Query: 327 QMLVFVPPHPLIKHWVSVLRNEQTP 401 Q+ +FVPPHPLI+HW+ + R+ QTP Sbjct: 4 QLRIFVPPHPLIRHWLGIARDRQTP 28
>UPP_ANASP (Q8YVB5) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP| pyrophosphorylase) (UPRTase) Length = 216 Score = 42.4 bits (98), Expect = 5e-04 Identities = 16/25 (64%), Positives = 21/25 (84%) Frame = +3 Query: 327 QMLVFVPPHPLIKHWVSVLRNEQTP 401 Q+ V+VPPHPLIKHW++V R+ TP Sbjct: 4 QLRVYVPPHPLIKHWLAVARDAATP 28
>UPP_SYNY3 (P72753) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP| pyrophosphorylase) (UPRTase) Length = 216 Score = 41.6 bits (96), Expect = 8e-04 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +3 Query: 327 QMLVFVPPHPLIKHWVSVLRNEQTP 401 Q+ V+VP HPLIKHW+ V R+E TP Sbjct: 4 QLRVYVPEHPLIKHWLGVARDENTP 28
>UPP_LEIXX (Q6AHB4) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP| pyrophosphorylase) (UPRTase) Length = 210 Score = 33.5 bits (75), Expect = 0.21 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +3 Query: 330 MLVFVPPHPLIKHWVSVLRNEQTPCAVLGVL 422 M V V HPLI H +SVLRN++TP L Sbjct: 1 MRVHVADHPLITHKLSVLRNKETPAPTFRAL 31
>YCXL_PORPU (P51354) Hypothetical 11.6 kDa protein in ycf19-ycf17 intergenic| region (ORF198) Length = 198 Score = 32.3 bits (72), Expect = 0.48 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 327 QMLVFVPPHPLIKHWVSVLRNEQTPCAVL 413 Q+ + V HPLI+HW +L N P +L Sbjct: 2 QLQINVASHPLIQHWSGILENNNNPGTIL 30
>KHSE_HALSA (Q9HP55) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)| Length = 301 Score = 32.3 bits (72), Expect = 0.48 Identities = 23/64 (35%), Positives = 31/64 (48%) Frame = -3 Query: 412 KTAQGVCSLRRTETQCLISGCGGTNTSIWPPEPGDRAPVAASGLDALATARDGRGLRASS 233 K A V R T ++G G P E + A V A+ LDA AT +G+R SS Sbjct: 27 KPADVVRVERADTTTITVTGAGAQYVPTDPQE--NTAGVVAAALDAPATIHINKGVRPSS 84 Query: 232 GVGT 221 G+G+ Sbjct: 85 GLGS 88
>TAL1_MOUSE (P22091) T-cell acute lymphocytic leukemia-1 protein homolog (TAL-1| protein) (Stem cell protein) Length = 329 Score = 32.0 bits (71), Expect = 0.62 Identities = 23/52 (44%), Positives = 27/52 (51%) Frame = +3 Query: 195 AVVESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPP 350 AV AR VPT L R P P+ A A AS+P A PG G+M+ PP Sbjct: 79 AVAAEARLRVPTTELCRPPGPAPAPAPASAP-----AELPGD-GRMVQLSPP 124
>PDLI5_RAT (Q62920) PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like| PDZ and LIM domains protein) Length = 591 Score = 31.6 bits (70), Expect = 0.81 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = +3 Query: 171 SPCSLAARAVVESARHTVPTPLLARRPRP-SLAVARASSPDAATGARSPGSGGQMLVFVP 347 SP S A ++ H P P+ A P P S + AS+ +A SP + G+ V VP Sbjct: 145 SPSSAFTPAHAATSSHASPPPVAAVTPPPLSASGLHASANPSAAQCSSPPNTGKPAVHVP 204 Query: 348 PHPLI 362 P + Sbjct: 205 RQPTV 209
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 26.2 bits (56), Expect(2) = 0.85 Identities = 14/44 (31%), Positives = 18/44 (40%) Frame = +3 Query: 225 PTPLLARRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPPHP 356 P P AR+P +LA + P P S G + VP P Sbjct: 1299 PAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKP 1342 Score = 23.9 bits (50), Expect(2) = 0.85 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +2 Query: 56 PRPSAHRPRDAVACHGHGRGRGSASPSP 139 P P+A +P AVA G GSA PSP Sbjct: 1276 PPPTAPKPVKAVA----GLPSGSAGPSP 1299
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/47 (36%), Positives = 19/47 (40%) Frame = +3 Query: 186 AARAVVESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGG 326 AA V A H P P AR PS + S + T S G GG Sbjct: 262 AAPPVTGGASHAAPQPAAARTAPPSAPIGPHGSSNTNTTTNSSGGGG 308
>ATPG_RALEJ (Q46VX9) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 291 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -3 Query: 352 CGGTNTSIWPPEPGDRAPVAASGLDALATARDGRGLRASSGVG 224 CGG NT++ + + G+D ATA G+G++ S +G Sbjct: 88 CGGLNTNVLRAVTNELKTLQGRGVDVQATAIGGKGMQFLSRIG 130
>TAL1_HUMAN (P17542) T-cell acute lymphocytic leukemia-1 protein (TAL-1| protein) (Stem cell protein) (T-cell leukemia/lymphoma-5 protein) Length = 331 Score = 30.8 bits (68), Expect = 1.4 Identities = 22/52 (42%), Positives = 25/52 (48%) Frame = +3 Query: 195 AVVESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPP 350 A ARH VPT L R P P+ A A AS A PG G+M+ PP Sbjct: 79 AATAEARHRVPTTELCRPPGPAPAPAPAS-----VTAELPGD-GRMVQLSPP 124
>POLN_SLDV (Q8QL53) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1 Length = 2593 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +3 Query: 225 PTPLLARRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPP 350 P AR+PRP A+ AS AT R+P G + +PP Sbjct: 1764 PVQAAARQPRP--AIVAASVAGTATSRRTPAPGSVQVRLLPP 1803
>DVL1_PANTR (Q5IS48) Segment polarity protein dishevelled homolog DVL-1| (Dishevelled-1) (DSH homolog 1) Length = 670 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 216 HTVPTPLLAR-RPRPSLAVARASSPDAATGARSPGSGGQMLVFVPPHPLIKHWVSV 380 HT P+ + + R RP+ ++R SSP + A +PG PPHP K + V Sbjct: 581 HTAPSGVGSSWRERPAGQLSRGSSPRSQASATAPG-------LPPPHPTTKAYTVV 629
>DVL1_HUMAN (O14640) Segment polarity protein dishevelled homolog DVL-1| (Dishevelled-1) (DSH homolog 1) Length = 670 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 216 HTVPTPLLAR-RPRPSLAVARASSPDAATGARSPGSGGQMLVFVPPHPLIKHWVSV 380 HT P+ + + R RP+ ++R SSP + A +PG PPHP K + V Sbjct: 581 HTAPSGVGSSWRERPAGQLSRGSSPRSQASATAPG-------LPPPHPTTKAYTVV 629
>UPP_THETN (Q8RD94) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP| pyrophosphorylase) (UPRTase) Length = 210 Score = 29.6 bits (65), Expect = 3.1 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +3 Query: 336 VFVPPHPLIKHWVSVLRNEQT 398 VFV HPLI+H +S++R+E T Sbjct: 5 VFVIDHPLIQHKISLIRDENT 25
>DIHR_ACHDO (Q16983) Diuretic hormone receptor precursor (DH-R)| Length = 441 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 186 AARAVVESARHTVPTPLLARRPRPSLAVARASSPDAATGA 305 AA+AV A T P+P +R R A+ +PDAA A Sbjct: 19 AAQAVAADAPTTTPSPRTLQRQRACEALMEGDAPDAAPDA 58
>PHSA_STRAT (Q53692) Phenoxazinone synthase (EC 1.-.-.-) (PHS)| Length = 642 Score = 29.6 bits (65), Expect = 3.1 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 183 ESKERPARGVAARMGGDGEALPRPRP 106 + +RP GV ++G DG LPRP P Sbjct: 323 DEDDRPVPGVVHQIGSDGGLLPRPVP 348
>UPP_CHLMU (Q9PJJ6) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP| pyrophosphorylase) (UPRTase) Length = 303 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = +3 Query: 201 VESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPPHPLIKHWVSV 380 +E + +PT L R + + +S P AA V+V HPLI+H S+ Sbjct: 63 IELEQTQLPTSTLTRYVSSTPTDSLSSKPLAA-------------VYVLSHPLIQHKASL 109 Query: 381 LRNEQT 398 LRN+ T Sbjct: 110 LRNKNT 115
>TOP3A_MOUSE (O70157) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase| III alpha) Length = 1003 Score = 29.6 bits (65), Expect = 3.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +3 Query: 201 VESARHTVPTPLLARRPRPSLAVARASSPDAATG 302 ++S++H + PL+ R RPS VA+A P G Sbjct: 775 MDSSQHNLSQPLVNRHTRPSKTVAQALLPPTTAG 808
>SSG1_HORVU (P09842) Granule-bound starch synthase 1, chloroplast precursor (EC| 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) Length = 603 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +2 Query: 302 GAVSWLRRPD-AGVRPAAPADQALGLRPAQRADALRRLRSA 421 G RRP G+RP PAD ALG+R + A ++ R A Sbjct: 17 GVTDRFRRPGFQGLRPRNPADAALGMRTIGASAAPKQSRKA 57
>T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-related-inducible| leucine zipper protein 4) Length = 780 Score = 29.3 bits (64), Expect = 4.0 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = +3 Query: 195 AVVESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGGQML 335 AV +S+ P P A P+P +A A+ S P A G GGQ L Sbjct: 284 AVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGA------GPGGQTL 324
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 29.3 bits (64), Expect = 4.0 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = -1 Query: 315 QETAPRWRRRGSTPSPPPETXXXXXXXXXXXXXXXXXXRPPGRRESKERPAR 160 +ET+PR RRR S PSPPP PP RR P R Sbjct: 538 KETSPRGRRRRS-PSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRR 588
>LRC56_HUMAN (Q8IYG6) Leucine-rich repeat-containing protein 56| Length = 542 Score = 29.3 bits (64), Expect = 4.0 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = +3 Query: 171 SPCSLAARAVVESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPG 317 SP SLA+ S++H VP+P RPR S +SSP +T +S G Sbjct: 432 SPPSLASEPSGTSSQHLVPSPPKHPRPRDS----GSSSPRWSTDLQSRG 476
>HAIR_DROVI (P29303) Protein hairy| Length = 378 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/57 (29%), Positives = 25/57 (43%) Frame = +3 Query: 186 AARAVVESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPPHP 356 AA A A+ +PLL P+ + + ASS +A +P S + PP P Sbjct: 275 AAAAAAAVAQQHQQSPLLVAMPQRTASTGSASSHSSAGYESAPSSSSSRGSYAPPSP 331
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 29.3 bits (64), Expect = 4.0 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +2 Query: 257 VSGGGEGVEP-RRRHRGAVSWLRRPDAGVRPAAPADQALGLRPAQRADALRR 409 V GGG+G P RR +R W RP + R P D + P +RA +++ Sbjct: 910 VGGGGQGPPPPRRENRTETRWGPRPGSCRRGIPPEDPGV---PPRRAGPIKK 958
>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)| Length = 2256 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = -3 Query: 415 PKTAQGVCSLRRTETQCLISGCGGTNTSIWPPEPGDRAPVAAS 287 P+T VCS+RR + + C GT +SI P E D+ VA S Sbjct: 2002 PQTGAVVCSVRRNQAGPEVVSCLGT-SSIPPKEGEDQKAVANS 2043
>DVL1L_HUMAN (P54792) Segment polarity protein dishevelled homolog DVL-1-like| (Dishevelled-1-like) (DSH homolog 1-like) Length = 670 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 216 HTVPTPLLAR-RPRPSLAVARASSPDAATGARSPGSGGQMLVFVPPHPLIKHWVSV 380 HT P+ + + R RP+ ++R SSP + + +PG PPHP K + V Sbjct: 581 HTAPSGVGSSWRERPADQLSRGSSPRSQASSYAPG-------LPPPHPTTKAYTVV 629
>MYO5_YEAST (Q04439) Myosin-5| Length = 1219 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = +3 Query: 186 AARAVVESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPPHP 356 A R V + T+ RP P A RA+ P A A + GSG Q + PP P Sbjct: 1023 ATRRSVPNPASTLTASQSNARPSPPTAATRAT-PAATPAAAAMGSGRQANIPPPPPP 1078
>GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog)| Length = 2260 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -3 Query: 415 PKTAQGVCSLRRTETQCLISGCGGTNTSIWPPEPGDRAPVAAS 287 P+T VCS+RR + + C +TS PPE G+ AA+ Sbjct: 2006 PQTGAVVCSVRRNQAGPEVVSC--LSTSSLPPEEGEDQRAAAN 2046
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%) Frame = +3 Query: 225 PTPLLARRPRPSLAVARASSPDAATGARSP----GSGG 326 P P LA P+PSL R P +GA SP SGG Sbjct: 1043 PPPRLALGPQPSLRGWRGGGPSPTSGAPSPSHHSSSGG 1080
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3| (EC 2.7.11.1) Length = 1309 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 210 ARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGG 326 ARH+ P PL A R R L R +P+ + + S GSGG Sbjct: 850 ARHSTPRPLDAGRGR-RLGGPRDPAPEKSRASSSGGSGG 887
>SALM_DROME (P39770) Homeotic protein spalt-major| Length = 1365 Score = 28.9 bits (63), Expect = 5.3 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 74 RPRDAVACHGHGRGRGSASPSPPMRAAT 157 RPR + + HGH G SA SP + A++ Sbjct: 1037 RPRSSASSHGHSVGSTSAPTSPSVHASS 1064
>IRX5_HUMAN (P78411) Iroquois-class homeodomain protein IRX-5 (Iroquois| homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A) Length = 482 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +3 Query: 237 LARRPRPSL-AVARASSPDAATGARSPGSGGQMLVFVPPHP 356 LA P P A A A P A G PG GG ++ PP P Sbjct: 282 LAEDPAPHYPAGAPAPGPHPAAGEVPPGPGGPSVIHSPPPP 322
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +3 Query: 225 PTPLLARRPRPSLAVARASSPDAATGARSPGSGG 326 P P LA P+PSL R P GA SP G Sbjct: 1035 PPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHG 1068
>IRX5_MOUSE (Q9JKQ4) Iroquois-class homeodomain protein IRX-5 (Iroquois| homeobox protein 5) (Homeodomain protein IRXB2) Length = 484 Score = 28.5 bits (62), Expect = 6.9 Identities = 19/62 (30%), Positives = 23/62 (37%) Frame = +3 Query: 171 SPCSLAARAVVESARHTVPTPLLARRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPP 350 SP A + E A P + A P PS G PGSGG ++ PP Sbjct: 273 SPAGPATARLAEDAGPHYPASVPAPGPHPS------------AGELPPGSGGSSVIHSPP 320 Query: 351 HP 356 P Sbjct: 321 PP 322
>CIC_MOUSE (Q924A2) Protein capicua homolog| Length = 1606 Score = 28.5 bits (62), Expect = 6.9 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Frame = +3 Query: 177 CSLAARAVVESARHTVPTPL-LARRPRPSLAVARASSPDAA-------TGARSPGSG--G 326 C AA V R TP+ +A +P P+ A ASS D A TG+R PG G Sbjct: 662 CRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASSNDIAGARTEMGTGSRVPGGSPMG 721 Query: 327 QMLVF 341 LV+ Sbjct: 722 VSLVY 726
>BGAL_FELCA (O19015) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 669 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = +3 Query: 312 PGSGGQMLVFVPPHPLI---KHWVSVLRNEQTPC 404 PG G Q+ +FVP H L+ + + VL E+ PC Sbjct: 595 PGRGPQVTLFVPRHILVTSAPNTIMVLELERAPC 628
>MURI_AGRT5 (Q8UE93) Glutamate racemase (EC 5.1.1.3)| Length = 273 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +3 Query: 189 ARAVVESARHTVPTPLLARRPRP-SLAVARASSPDAATGARSPGSG 323 A A+ ARH VP P A P AV + PD AT G G Sbjct: 222 AEAIARRARHLVPLPQDAEHPDGFDFAVFTSGKPDFATRRLMQGFG 267
>DADA_BRAJA (Q89T28) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 421 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = +3 Query: 243 RRPRPSLAVARASSPDAATGARSPGSGGQMLVFVPPHPLIKHWVSVLRNEQTPCAVLGVL 422 R+P P+L + A++ + + G SP +G + V L+KH V+R + P V+ Sbjct: 31 RQPEPALETSFANAGEVSPGYSSPWAGPGVPVKAVKWLLMKHGPLVIRPKLDP-----VM 85 Query: 423 W 425 W Sbjct: 86 W 86
>Y3466_MYCTU (O06331) Hypothetical protein Rv3466/MT3572| Length = 222 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%) Frame = -1 Query: 198 PPGRRESKERPARGVAARM------GGDGEALPRPRP 106 PPGRR R +R +++R G G A PR RP Sbjct: 150 PPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRP 186
>Y1614_MYCBO (P0A5F2) Hypothetical protein Mb1614c| Length = 222 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%) Frame = -1 Query: 198 PPGRRESKERPARGVAARM------GGDGEALPRPRP 106 PPGRR R +R +++R G G A PR RP Sbjct: 150 PPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRP 186
>Y1588_MYCTU (P0A5F1) Hypothetical protein Rv1588c/MT1623| Length = 222 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%) Frame = -1 Query: 198 PPGRRESKERPARGVAARM------GGDGEALPRPRP 106 PPGRR R +R +++R G G A PR RP Sbjct: 150 PPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRP 186
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 Query: 56 PRPSAHRPRDAVACHGHGRGRGSASPSP 139 PR S H R+++ G RG GSA P P Sbjct: 1023 PRRSHHPRRNSLDGGGRSRGAGSAQPEP 1050
>HA34_BRELC (Q99074) HAM34 protein| Length = 173 Score = 28.1 bits (61), Expect = 9.0 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Frame = -3 Query: 421 STPKTAQGVCSLRRTETQCLISGCGGTNTSIWPPEPGDRAPVAASGLDALATARDGRGLR 242 +TP G S +T T G TN + P P D A + LDA AT Sbjct: 46 TTPAADAGTASTEQTTTAGP-EAAGATNGTTTTP-PADGTQTATAPLDATATEESSASGE 103 Query: 241 ASSGVGTVWR---ADSTTARAAREQG 173 + VGT +DST A + +G Sbjct: 104 MTPTVGTDTSDQVSDSTAAGPSTPEG 129
>LASP1_MOUSE (Q61792) LIM and SH3 domain protein 1 (LASP-1) (MLN 50)| Length = 263 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = +2 Query: 266 GGEGVEPRRRHRGAVSWLRRPDAGVRP 346 GGEGVEP RR S RRP +P Sbjct: 135 GGEGVEPERREAQDSSSYRRPTEQQQP 161
>GNP2_GIALA (O97440) Glucosamine-6-phosphate isomerase 2 (EC 3.5.99.6)| (Glucosamine-6-phosphate deaminase 2) (GNPDA 2) (GlcN6P deaminase 2) Length = 263 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +3 Query: 171 SPCSLAARAVVESARHTVPTPLLARRPRPSLAVARASSPDAA 296 S C +A+V + VP LL R PR V A+ + A Sbjct: 217 SKCEAVTKAIVGEPTNAVPASLLQRHPRCCFYVDEAAGAEVA 258 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,267,184 Number of Sequences: 219361 Number of extensions: 835741 Number of successful extensions: 4972 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 4507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4946 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
