ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet93e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
2dbj|AK070824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
3dbj|AK060610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
4gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
6gb|AY110416.1| Zea mays CL16523_1 mRNA sequence 113 5e-22
7gb|AY020434.1| Oryza sativa microsatellite MRG2759 containing (G... 72 2e-09
8ref|XM_586315.2| PREDICTED: Bos taurus similar to Tenascin precu... 44 0.37
9ref|XM_612563.2| PREDICTED: Bos taurus similar to Tenascin precu... 44 0.37
10emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete ch... 44 0.37
11gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 44 0.37
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.37
14emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 44 0.37
15ref|NM_184716.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
16ref|NM_192639.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
17ref|XM_477288.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
18gb|AY781411.1| Chlamydomonas incerta retinoblastoma-like protein... 42 1.4
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
20ref|XM_846805.1| PREDICTED: Canis familiaris hypothetical protei... 42 1.4
21ref|XM_542545.2| PREDICTED: Canis familiaris similar to potassiu... 42 1.4
22emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.4
23gb|AC091233.8| Oryza sativa chromosome 3 BAC OSJNBa0053G10 genom... 42 1.4
24tpg|BK000744.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M137,... 42 1.4
25dbj|AB195255.1| Papilio xuthus mRNA for Ebony, complete cds 42 1.4
26gb|AF375824.1|AF375824 Chlamydomonas reinhardtii mating type pro... 42 1.4
27gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.4
28dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
31gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.4
32dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
33dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
34dbj|AK107878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
35emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 1.4
36ref|XM_550037.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
37gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 5.7
38ref|NM_190346.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
39ref|XM_478519.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
40gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
41gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 5.7
42gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.7
43gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.7
44ref|XM_959216.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.7
45ref|XM_324684.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.7
46gb|AE009172.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 5.7
47gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 5.7
48gb|AY528721.1| Triticum aestivum S-like RNase (WRN3) mRNA, parti... 40 5.7
49emb|CR536615.10| Zebrafish DNA sequence from clone CH211-247C17 ... 40 5.7
50gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.7
51gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.7
52emb|BX050807.1|CNS09BD7 Single read from an extremity of a full-... 40 5.7
53emb|X73036.1|CCGAPCD Chondrus crispus GapC gene for glyceraldehy... 40 5.7
54emb|X73034.1|CCGAPC Chondrus crispus mRNA for glyceraldehyde 3-p... 40 5.7
55emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.7
56emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 5.7
57dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.7
58gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 5.7
59gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.7
60gb|M57680.3|M57680 Rhodobacter sphaeroides cytochrome c oxidase ... 40 5.7
61gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 5.7
62emb|AL954670.11| Zebrafish DNA sequence from clone CH211-274J15 ... 40 5.7
63dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
64dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
65dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.7
66dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
67dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
68dbj|AK107269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
69dbj|AK071717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
70gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.7
71gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.7
72gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.7
73gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.7
74emb|CT030137.13| Mouse DNA sequence from clone RP24-374C21 on ch... 40 5.7 
>dbj|AK099158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069E05, full
           insert sequence
          Length = 1326

 Score =  194 bits (98), Expect = 2e-46
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                       
Query: 259 ctctggcggtggcgagggcgtcgagccccgacgccgccaccggggcgcggtctcctggct 318
           ||||| ||| ||| || ||| ||||||||||||||||||| |||||||| || ||   ||
Sbjct: 265 ctctgacggcggcaagagcggcgagccccgacgccgccacgggggcgcgatcgccctcct 324

                                                                       
Query: 319 ccggcggccagatgctggtgttcgtcccgccgcacccgctgatcaagcactgggtctccg 378
           ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 325 ccggcggccagatgctggtgttcgtgccgccgcacccgctgataaagcactgggtctccg 384

                                             
Query: 379 tcctgcgcaacgagcagacgccctgcgccgtctt 412
           ||||||||||||||||||||||||||||| ||||
Sbjct: 385 tcctgcgcaacgagcagacgccctgcgccatctt 418



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 79  tcgcgatgccgtcgcctgccacggccacggccgcggccgcgggagcgcctctcc 132
           |||| ||||||||||  ||||||||| |||||||||  ||||||||||||||||
Sbjct: 64  tcgccatgccgtcgctcgccacggccgcggccgcgggagcgggagcgcctctcc 117
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>dbj|AK070824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069E03, full
           insert sequence
          Length = 1326

 Score =  194 bits (98), Expect = 2e-46
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                       
Query: 259 ctctggcggtggcgagggcgtcgagccccgacgccgccaccggggcgcggtctcctggct 318
           ||||| ||| ||| || ||| ||||||||||||||||||| |||||||| || ||   ||
Sbjct: 265 ctctgacggcggcaagagcggcgagccccgacgccgccacgggggcgcgatcgccctcct 324

                                                                       
Query: 319 ccggcggccagatgctggtgttcgtcccgccgcacccgctgatcaagcactgggtctccg 378
           ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 325 ccggcggccagatgctggtgttcgtgccgccgcacccgctgataaagcactgggtctccg 384

                                             
Query: 379 tcctgcgcaacgagcagacgccctgcgccgtctt 412
           ||||||||||||||||||||||||||||| ||||
Sbjct: 385 tcctgcgcaacgagcagacgccctgcgccatctt 418



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 79  tcgcgatgccgtcgcctgccacggccacggccgcggccgcgggagcgcctctcc 132
           |||| ||||||||||  ||||||||| |||||||||  ||||||||||||||||
Sbjct: 64  tcgccatgccgtcgctcgccacggccgcggccgcgggagcgggagcgcctctcc 117
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>dbj|AK060610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D08, full
           insert sequence
          Length = 1287

 Score =  194 bits (98), Expect = 2e-46
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                       
Query: 259 ctctggcggtggcgagggcgtcgagccccgacgccgccaccggggcgcggtctcctggct 318
           ||||| ||| ||| || ||| ||||||||||||||||||| |||||||| || ||   ||
Sbjct: 291 ctctgacggcggcaagagcggcgagccccgacgccgccacgggggcgcgatcgccctcct 350

                                                                       
Query: 319 ccggcggccagatgctggtgttcgtcccgccgcacccgctgatcaagcactgggtctccg 378
           ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 351 ccggcggccagatgctggtgttcgtgccgccgcacccgctgataaagcactgggtctccg 410

                                             
Query: 379 tcctgcgcaacgagcagacgccctgcgccgtctt 412
           ||||||||||||||||||||||||||||| ||||
Sbjct: 411 tcctgcgcaacgagcagacgccctgcgccatctt 444



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 79  tcgcgatgccgtcgcctgccacggccacggccgcggccgcgggagcgcctctcc 132
           |||| ||||||||||  ||||||||| |||||||||  ||||||||||||||||
Sbjct: 90  tcgccatgccgtcgctcgccacggccgcggccgcgggagcgggagcgcctctcc 143



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 43/49 (87%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                           
Query: 7  cgaccccaccgtatcccac-cgtcgcacccttcactgcgctcgctttcg 54
          ||||||||||||||||||| | |||| | | ||||||| ||||||||||
Sbjct: 9  cgaccccaccgtatcccacacctcgctcacctcactgccctcgctttcg 57
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>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06,
             complete sequence
          Length = 145323

 Score =  131 bits (66), Expect = 2e-27
 Identities = 75/78 (96%)
 Strand = Plus / Minus

                                                                         
Query: 335   ggtgttcgtcccgccgcacccgctgatcaagcactgggtctccgtcctgcgcaacgagca 394
             ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 90071 ggtgttcgtgccgccgcacccgctgataaagcactgggtctccgtcctgcgcaacgagca 90012

                               
Query: 395   gacgccctgcgccgtctt 412
             ||||||||||||| ||||
Sbjct: 90011 gacgccctgcgccatctt 89994



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 259   ctctggcggtggcgagggcgtcgagccccgacgccgccaccggggcgcggtctcctggct 318
             ||||| ||| ||| || ||| ||||||||||||||||||| |||||||| || ||   ||
Sbjct: 90287 ctctgacggcggcaagagcggcgagccccgacgccgccacgggggcgcgatcgccctcct 90228

                                 
Query: 319   ccggcggccagatgctggtg 338
             ||||||||||||||||||||
Sbjct: 90227 ccggcggccagatgctggtg 90208



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 79    tcgcgatgccgtcgcctgccacggccacggccgcggccgcgggagcgcctctcc 132
             |||| ||||||||||  ||||||||| |||||||||  ||||||||||||||||
Sbjct: 90488 tcgccatgccgtcgctcgccacggccgcggccgcgggagcgggagcgcctctcc 90435



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 43/49 (87%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                              
Query: 7     cgaccccaccgtatcccac-cgtcgcacccttcactgcgctcgctttcg 54
             ||||||||||||||||||| | |||| | | ||||||| ||||||||||
Sbjct: 90569 cgaccccaccgtatcccacacctcgctcacctcactgccctcgctttcg 90521
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  131 bits (66), Expect = 2e-27
 Identities = 75/78 (96%)
 Strand = Plus / Minus

                                                                            
Query: 335      ggtgttcgtcccgccgcacccgctgatcaagcactgggtctccgtcctgcgcaacgagca 394
                ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 22246806 ggtgttcgtgccgccgcacccgctgataaagcactgggtctccgtcctgcgcaacgagca 22246747

                                  
Query: 395      gacgccctgcgccgtctt 412
                ||||||||||||| ||||
Sbjct: 22246746 gacgccctgcgccatctt 22246729



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                            
Query: 259      ctctggcggtggcgagggcgtcgagccccgacgccgccaccggggcgcggtctcctggct 318
                ||||| ||| ||| || ||| ||||||||||||||||||| |||||||| || ||   ||
Sbjct: 22247022 ctctgacggcggcaagagcggcgagccccgacgccgccacgggggcgcgatcgccctcct 22246963

                                    
Query: 319      ccggcggccagatgctggtg 338
                ||||||||||||||||||||
Sbjct: 22246962 ccggcggccagatgctggtg 22246943



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 79       tcgcgatgccgtcgcctgccacggccacggccgcggccgcgggagcgcctctcc 132
                |||| ||||||||||  ||||||||| |||||||||  ||||||||||||||||
Sbjct: 22247223 tcgccatgccgtcgctcgccacggccgcggccgcgggagcgggagcgcctctcc 22247170



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 43/49 (87%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                 
Query: 7        cgaccccaccgtatcccac-cgtcgcacccttcactgcgctcgctttcg 54
                ||||||||||||||||||| | |||| | | ||||||| ||||||||||
Sbjct: 22247304 cgaccccaccgtatcccacacctcgctcacctcactgccctcgctttcg 22247256



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     cttgctctctcgccgcccgg 194
               ||||||||||||||||||||
Sbjct: 8872600 cttgctctctcgccgcccgg 8872581
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>gb|AY110416.1| Zea mays CL16523_1 mRNA sequence
          Length = 638

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                       
Query: 321 ggcggccagatgctggtgttcgtcccgccgcacccgctgatcaagcactgggtctccgtc 380
           ||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||| 
Sbjct: 320 ggcggccagatgctggtgttcgtcccgccacacccgctcataaagcattgggtctccgtg 379

                                    
Query: 381 ctgcgcaacgagcagacgccctgcg 405
           ||||||||||| ||||| |||||||
Sbjct: 380 ctgcgcaacgaacagacaccctgcg 404
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>gb|AY020434.1| Oryza sativa microsatellite MRG2759 containing (GA)X17, genomic
           sequence
          Length = 234

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 259 ctctggcggtggcgagggcgtcgagccccgacgccgccaccggggcgcggtctcctggct 318
           ||||| ||| ||| || ||| ||||||||||||||||||| |||||||| || ||   ||
Sbjct: 224 ctctgacggcggcaagagcggcgagccccgacgccgccacgggggcgcgatcgccctcct 165

                               
Query: 319 ccggcggccagatgctggtg 338
           ||||||||||||||||||||
Sbjct: 164 ccggcggccagatgctggtg 145
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>ref|XM_586315.2| PREDICTED: Bos taurus similar to Tenascin precursor (TN)
            (Hexabrachion) (Cytotactin) (Neuronectin) (GMEM) (JI)
            (Miotendinous antigen) (Glioma-associated-extracellular
            matrix antigen) (GP 150-225) (Tenascin-C) (TN-C)
            (LOC509373), mRNA
          Length = 1692

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 91   cgcctgccacggccacggccgc 112
            ||||||||||||||||||||||
Sbjct: 1422 cgcctgccacggccacggccgc 1443
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>ref|XM_612563.2| PREDICTED: Bos taurus similar to Tenascin precursor (TN)
           (Hexabrachion) (Cytotactin) (Neuronectin) (GMEM) (JI)
           (Miotendinous antigen) (Glioma-associated-extracellular
           matrix antigen) (GP 150-225) (Tenascin-C) (TN-C)
           (LOC540664), partial mRNA
          Length = 5790

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  cgcctgccacggccacggccgc 112
           ||||||||||||||||||||||
Sbjct: 339 cgcctgccacggccacggccgc 360
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>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12
          Length = 340900

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 127   ctctccatcgccgcccatgcgcgccgcgacgccc 160
             ||||||||||||||||| |||| | |||||||||
Sbjct: 29030 ctctccatcgccgcccaggcgctcagcgacgccc 28997
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 135     cgccgcccatgcgcgccgcgac 156
               ||||||||||||||||||||||
Sbjct: 1336646 cgccgcccatgcgcgccgcgac 1336667
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 314    tggctccggcggccagatgctg 335
              ||||||||||||||||||||||
Sbjct: 214030 tggctccggcggccagatgctg 214009
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 314    tggctccggcggccagatgctg 335
              ||||||||||||||||||||||
Sbjct: 214030 tggctccggcggccagatgctg 214009
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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 314   tggctccggcggccagatgctg 335
             ||||||||||||||||||||||
Sbjct: 90963 tggctccggcggccagatgctg 90984
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>ref|NM_184716.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4671

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 98  cacggccacggccgcggccgc 118
           |||||||||||||||||||||
Sbjct: 700 cacggccacggccgcggccgc 680
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>ref|NM_192639.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 366

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 86  gccgtcgcctgccacggccacggccgcggccgc 118
           |||| |||||||||||||||| ||||| |||||
Sbjct: 297 gccgccgcctgccacggccaccgccgccgccgc 265
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>ref|XM_477288.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 755

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 84  atgccgtcgcctgccacggccacggccgcggcc 116
           |||||| |||| |||||||||||||| ||||||
Sbjct: 440 atgccggcgccggccacggccacggcagcggcc 472
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>gb|AY781411.1| Chlamydomonas incerta retinoblastoma-like protein (mat3) gene,
            complete cds
          Length = 5956

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 262  tggcggtggcgagggcgtcgagccccgacgccg 294
            |||||| ||||| |||||||||||||| |||||
Sbjct: 1801 tggcggaggcgaaggcgtcgagccccgccgccg 1833
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 98       cacggccacggccgcggccgc 118
                |||||||||||||||||||||
Sbjct: 19504374 cacggccacggccgcggccgc 19504394



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 98      cacggccacggccgcggccgc 118
               |||||||||||||||||||||
Sbjct: 7158116 cacggccacggccgcggccgc 7158096
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>ref|XM_846805.1| PREDICTED: Canis familiaris hypothetical protein LOC609535
           (LOC609535), mRNA
          Length = 2605

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  gccacggccacggccgcggcc 116
           |||||||||||||||||||||
Sbjct: 718 gccacggccacggccgcggcc 698
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>ref|XM_542545.2| PREDICTED: Canis familiaris similar to potassium voltage-gated
           channel, shaker-related subfamily, member 4 (LOC485427),
           mRNA
          Length = 2001

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 cggccacggccgcggccgcgg 120
           |||||||||||||||||||||
Sbjct: 137 cggccacggccgcggccgcgg 157
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 96      gccacggccacggccgcggccgcgg 120
               |||||||||||||||||||| ||||
Sbjct: 1327559 gccacggccacggccgcggctgcgg 1327535
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>gb|AC091233.8| Oryza sativa chromosome 3 BAC OSJNBa0053G10 genomic sequence, complete
             sequence
          Length = 145155

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 98    cacggccacggccgcggccgc 118
             |||||||||||||||||||||
Sbjct: 48663 cacggccacggccgcggccgc 48643
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>tpg|BK000744.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M137, complete sequence
          Length = 1052

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 86  gccgtcgcctgccacggccacggccgcggccgc 118
           |||| |||||||||||||||| ||||| |||||
Sbjct: 460 gccgccgcctgccacggccaccgccgccgccgc 428
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>dbj|AB195255.1| Papilio xuthus mRNA for Ebony, complete cds
          Length = 3575

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 131 ccatcgccgcccatgcgcgcc 151
           |||||||||||||||||||||
Sbjct: 311 ccatcgccgcccatgcgcgcc 331
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>gb|AF375824.1|AF375824 Chlamydomonas reinhardtii mating type protein Mat3p (mat3) gene,
            complete cds
          Length = 7056

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 94   ctgccacggccacggccgcggccgc 118
            ||||||||||||| |||||||||||
Sbjct: 5561 ctgccacggccaccgccgcggccgc 5537
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 287     cgacgccgccaccggggcgcg 307
               |||||||||||||||||||||
Sbjct: 1828644 cgacgccgccaccggggcgcg 1828664
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 84      atgccgtcgcctgccacggccacggccgcggcc 116
               |||||| |||| |||||||||||||| ||||||
Sbjct: 8558307 atgccggcgccggccacggccacggcagcggcc 8558339



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 96       gccacggccacggccgcggc 115
                ||||||||||||||||||||
Sbjct: 20698784 gccacggccacggccgcggc 20698803
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 98       cacggccacggccgcggccgc 118
                |||||||||||||||||||||
Sbjct: 19497401 cacggccacggccgcggccgc 19497421



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 98      cacggccacggccgcggccgc 118
               |||||||||||||||||||||
Sbjct: 7156011 cacggccacggccgcggccgc 7155991
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 86       gccgtcgcctgccacggccacggccgcggccgc 118
                |||| |||||||||||||||| ||||| |||||
Sbjct: 23614447 gccgccgcctgccacggccaccgccgccgccgc 23614415



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 100      cggccacggccgcggccgcg 119
                ||||||||||||||||||||
Sbjct: 34996280 cggccacggccgcggccgcg 34996299



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 94      ctgccacggccacggccgcggccgcgggagcgcctc 129
               |||| ||| ||||||||||||| ||||| |||||||
Sbjct: 1868760 ctgcgacgcccacggccgcggcggcgggggcgcctc 1868725
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>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0049C20, from chromosome 3, complete sequence
          Length = 136098

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 98    cacggccacggccgcggccgc 118
             |||||||||||||||||||||
Sbjct: 36222 cacggccacggccgcggccgc 36242
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>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518F01
          Length = 154541

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 86    gccgtcgcctgccacggccacggccgcggccgc 118
             |||| |||||||||||||||| ||||| |||||
Sbjct: 77146 gccgccgcctgccacggccaccgccgccgccgc 77114
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>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0669H03
          Length = 167878

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 84    atgccgtcgcctgccacggccacggccgcggcc 116
             |||||| |||| |||||||||||||| ||||||
Sbjct: 90775 atgccggcgccggccacggccacggcagcggcc 90807
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>dbj|AK107878.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-D03, full
           insert sequence
          Length = 755

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 84  atgccgtcgcctgccacggccacggccgcggcc 116
           |||||| |||| |||||||||||||| ||||||
Sbjct: 440 atgccggcgccggccacggccacggcagcggcc 472
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 96      gccacggccacggccgcggcc 116
               |||||||||||||||||||||
Sbjct: 1031374 gccacggccacggccgcggcc 1031354
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>ref|XM_550037.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2376

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 94   ctgccacggccacggccgcggccgcgggagcgcctc 129
            |||| ||| ||||||||||||| ||||| |||||||
Sbjct: 1983 ctgcgacgcccacggccgcggcggcgggggcgcctc 1948
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 134    tcgccgcccatgcgcgccgcgacg 157
              |||||||| |||||||||||||||
Sbjct: 714869 tcgccgccgatgcgcgccgcgacg 714846
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>ref|NM_190346.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 cggccacggccgcggccgcg 119
           ||||||||||||||||||||
Sbjct: 635 cggccacggccgcggccgcg 654
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>ref|XM_478519.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 96   gccacggccacggccgcggc 115
            ||||||||||||||||||||
Sbjct: 1364 gccacggccacggccgcggc 1345
to top
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10,
             complete sequence
          Length = 181130

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   cttgctctctcgccgcccgg 194
             ||||||||||||||||||||
Sbjct: 84525 cttgctctctcgccgcccgg 84506
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    cggccacggccgcggccgcg 119
              ||||||||||||||||||||
Sbjct: 418188 cggccacggccgcggccgcg 418207
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     cgccgcgacgccccgcgcag 167
               ||||||||||||||||||||
Sbjct: 2269085 cgccgcgacgccccgcgcag 2269066
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 105     acggccgcggccgcgggagcgcct 128
               ||||||||||||||| ||||||||
Sbjct: 2721111 acggccgcggccgcgcgagcgcct 2721088
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>ref|XM_959216.1| Neurospora crassa OR74A hypothetical protein (NCU00505.1) partial
           mRNA
          Length = 372

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  gccacggccacggccgcggccgcg 119
           |||||||||||| |||||||||||
Sbjct: 369 gccacggccacgaccgcggccgcg 346
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>ref|XM_324684.1| Neurospora crassa OR74A hypothetical protein (NCU00505.1) partial
           mRNA
          Length = 372

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  gccacggccacggccgcggccgcg 119
           |||||||||||| |||||||||||
Sbjct: 369 gccacggccacgaccgcggccgcg 346
to top
>gb|AE009172.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 198
            of 256 of the complete sequence
          Length = 11789

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  catcgccgcccatgcgcgcc 151
            ||||||||||||||||||||
Sbjct: 6378 catcgccgcccatgcgcgcc 6397
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 286     ccgacgccgccaccggggcgcggtctcc 313
               |||||||||||||||| ||||| |||||
Sbjct: 2833868 ccgacgccgccaccggcgcgcgctctcc 2833895
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>gb|AY528721.1| Triticum aestivum S-like RNase (WRN3) mRNA, partial cds
          Length = 799

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcggtggcgagggcgtcgag 283
           ||||||||||||||||||||
Sbjct: 463 gcggtggcgagggcgtcgag 444
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>emb|CR536615.10| Zebrafish DNA sequence from clone CH211-247C17 in linkage group 1,
              complete sequence
          Length = 153688

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tccatccgctcaccgccctc 80
              ||||||||||||||||||||
Sbjct: 145927 tccatccgctcaccgccctc 145908
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 100     cggccacggccgcggccgcgggag 123
               ||||| ||||||||||||||||||
Sbjct: 3050631 cggccgcggccgcggccgcgggag 3050608
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 136     gccgcccatgcgcgccgcgacgcc 159
               |||||||||||||||||| |||||
Sbjct: 2843884 gccgcccatgcgcgccgccacgcc 2843907
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>emb|BX050807.1|CNS09BD7 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC27CA06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 738

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 97  ccacggccacggccgcggcc 116
           ||||||||||||||||||||
Sbjct: 141 ccacggccacggccgcggcc 122
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>emb|X73036.1|CCGAPCD Chondrus crispus GapC gene for glyceraldehyde-3-phosphate
            dehydrogenase
          Length = 2746

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   acggccacggccgcggccgc 118
            ||||||||||||||||||||
Sbjct: 1856 acggccacggccgcggccgc 1837
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>emb|X73034.1|CCGAPC Chondrus crispus mRNA for glyceraldehyde 3-phosphate dehydrogenase
           (GapC gene)
          Length = 1165

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  acggccacggccgcggccgc 118
           ||||||||||||||||||||
Sbjct: 711 acggccacggccgcggccgc 692
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>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   tggcggtggcgagggcgtcgagcc 285
             ||||||||||| ||||||||||||
Sbjct: 58654 tggcggtggcgcgggcgtcgagcc 58631
to top
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  cggtctcctggctccggcgg 325
            ||||||||||||||||||||
Sbjct: 4556 cggtctcctggctccggcgg 4575
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 86      gccgtcgcctgccacggcca 105
               ||||||||||||||||||||
Sbjct: 3509506 gccgtcgcctgccacggcca 3509487
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 132     catcgccgcccatgcgcgcc 151
               ||||||||||||||||||||
Sbjct: 2197227 catcgccgcccatgcgcgcc 2197246
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    catcgccgcccatgcgcgcc 151
              ||||||||||||||||||||
Sbjct: 660092 catcgccgcccatgcgcgcc 660111
to top
>gb|M57680.3|M57680 Rhodobacter sphaeroides cytochrome c oxidase subunit II (coxII)
           gene, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 cggccacggccgcggccgcg 119
           ||||||||||||||||||||
Sbjct: 404 cggccacggccgcggccgcg 423
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 96      gccacggccacggccgcggccgcg 119
               |||||||||||||| |||||||||
Sbjct: 1305368 gccacggccacggctgcggccgcg 1305391
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>emb|AL954670.11| Zebrafish DNA sequence from clone CH211-274J15 in linkage group 10,
             complete sequence
          Length = 148765

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tccatccgctcaccgccctc 80
             ||||||||||||||||||||
Sbjct: 14993 tccatccgctcaccgccctc 14974
to top
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0485B12
          Length = 156047

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  cggccacggccgcggccgcg 119
            ||||||||||||||||||||
Sbjct: 3430 cggccacggccgcggccgcg 3449
to top
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0703B11
          Length = 144074

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   cggccacggccgcggccgcg 119
             ||||||||||||||||||||
Sbjct: 40508 cggccacggccgcggccgcg 40527
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 282     agccccgacgccgccaccggggcg 305
               |||||||||||||||||| |||||
Sbjct: 3956173 agccccgacgccgccaccagggcg 3956196
to top
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0083M16
          Length = 179428

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 94     ctgccacggccacggccgcggccgcgggagcgcctc 129
              |||| ||| ||||||||||||| ||||| |||||||
Sbjct: 110142 ctgcgacgcccacggccgcggcggcgggggcgcctc 110107
to top
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0681F05
          Length = 144741

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gccacggccacggccgcggc 115
             ||||||||||||||||||||
Sbjct: 51534 gccacggccacggccgcggc 51553
to top
>dbj|AK107269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H09, full
            insert sequence
          Length = 1461

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 96   gccacggccacggccgcggc 115
            ||||||||||||||||||||
Sbjct: 1364 gccacggccacggccgcggc 1345
to top
>dbj|AK071717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109O07, full
           insert sequence
          Length = 3144

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 cttgctctctcgccgcccgg 194
           ||||||||||||||||||||
Sbjct: 345 cttgctctctcgccgcccgg 364
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 329     gatgctggtgttcgtcccgc 348
               ||||||||||||||||||||
Sbjct: 3035792 gatgctggtgttcgtcccgc 3035811
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 86      gccgtcgcctgccacggcca 105
               ||||||||||||||||||||
Sbjct: 3505261 gccgtcgcctgccacggcca 3505242
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 96      gccacggccacggccgcggccgcg 119
               ||||||||| ||||||||||||||
Sbjct: 2205788 gccacggcctcggccgcggccgcg 2205765
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 321     ggcggccagatgctggtgttcgtc 344
               ||||||||| ||||||||||||||
Sbjct: 4234807 ggcggccagctgctggtgttcgtc 4234784



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 294     gccaccggggcgcggtctcctggc 317
               ||||||||||||||||||| ||||
Sbjct: 3338861 gccaccggggcgcggtctcttggc 3338884



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 294   gccaccggggcgcggtctcctggc 317
             ||||||||||||||||||| ||||
Sbjct: 36380 gccaccggggcgcggtctcttggc 36357
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>emb|CT030137.13| Mouse DNA sequence from clone RP24-374C21 on chromosome 12, complete
             sequence
          Length = 197285

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 87    ccgtcgcctgccacggccacggccgcggccgc 118
             |||||||| ||||||||||||||| |||||||
Sbjct: 69796 ccgtcgcc-gccacggccacggccacggccgc 69766


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,200,525
Number of Sequences: 3902068
Number of extensions: 2200525
Number of successful extensions: 57083
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 53826
Number of HSP's gapped (non-prelim): 3245
length of query: 426
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 404
effective length of database: 17,147,199,772
effective search space: 6927468707888
effective search space used: 6927468707888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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