| Clone Name | baet93d10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose pyrophosphatase (sagppase gene) Length = 639 Score = 769 bits (388), Expect = 0.0 Identities = 410/416 (98%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 tgctccctgtcctcgtctccttcctcgtcctgcccttctccgccatggccctgacccagg 76 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 acttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 136 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 196 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 256 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 316 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 317 cggccgcctctgagctcctcttcgtcactgagggcaccatcttggcgggcttcatcagct 376 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 377 cctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttc 432
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 Score = 761 bits (384), Expect = 0.0 Identities = 409/416 (98%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 106 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107 acttctgcgtcgccgacctgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 166 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 167 gcgtcggcgcgggggacttctactaccacggtctcgccgccgcgggcaacaccagcaacc 226 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tcatcaaggcggtcgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 286 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 gcatctccgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 346 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 347 cggccgcctctgagctcctcttcgtcaccgagggcaccatcttggcgggcttcatcagct 406 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 407 cctcctccaacaccgtgtacaccaagacgctctacaagggcgacatcatggtgttc 462
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose pyrophosphatase Length = 642 Score = 634 bits (320), Expect = e-179 Identities = 393/416 (94%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| || |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 20 tgctccccgtgctcatctccttccttatcatgcccttctccgccatggccctgacccagg 79 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 80 acttctgcgtcgccgacctgtcctgcagcgacacaccggcggggtacccgtgcaaggccg 139 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gcgtcagcgcaggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 199 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 200 tcatcaaggcggccgtgaccccggccttcgtcgggcagttccccggcgtgaacgggctcg 259 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 ||||||| || |||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 260 gcatctccgcagcgaggctcgacatcgccatgggcggcgtcgtgccgctgcacacccacc 319 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 ||||||||||||||||||| || || ||||||||||||||| |||||||||||||||||| Sbjct: 320 cggccgcctctgagctcctgtttgtcaccgagggcaccatcctggcgggcttcatcagct 379 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 380 cctcctccaacaccgtgtacaccaagacactctacaagggcgacatcatggtgttc 435
>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds Length = 1030 Score = 452 bits (228), Expect = e-124 Identities = 370/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 123 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 182 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 183 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 242 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 243 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 302 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 tcatcaaggccgccgtgaccccggccttcgtcggccagttccccggcgtgaacgggctcg 362 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 363 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 422 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 423 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 482 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 483 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 538
>ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 444 bits (224), Expect = e-121 Identities = 369/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 121 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 180 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 181 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 240 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 241 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 300 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 360 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 361 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 420 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 421 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 480 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 481 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 536
>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA Length = 994 Score = 444 bits (224), Expect = e-121 Identities = 369/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 110 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 169 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 170 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 229 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 230 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 289 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 290 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 349 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 350 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 409 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 410 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 469 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 470 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 525
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 444 bits (224), Expect = e-121 Identities = 369/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Minus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 22551683 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 22551624 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 22551623 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 22551564 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 22551563 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 22551504 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 22551503 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 22551444 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 22551443 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 22551384 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 22551383 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 22551324 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 22551323 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 22551268 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 273 ggcggcgtcgtgccgatgcacacccacccggccgcctctgagctcctct 321 ||||||||||||||| |||||||||| ||||||| ||| |||||||||| Sbjct: 22546450 ggcggcgtcgtgccgctgcacacccatccggccggctccgagctcctct 22546402 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ctgacccaggacttctgcgtcgcc 74 ||||| |||||||||||||||||| Sbjct: 22546681 ctgacgcaggacttctgcgtcgcc 22546658
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 444 bits (224), Expect = e-121 Identities = 369/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Minus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 25184 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 25125 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 25124 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 25065 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 25064 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 25005 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 25004 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 24945 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 24944 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 24885 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 24884 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 24825 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 24824 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 24769 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 273 ggcggcgtcgtgccgatgcacacccacccggccgcctctgagctcctct 321 ||||||||||||||| |||||||||| ||||||| ||| |||||||||| Sbjct: 19951 ggcggcgtcgtgccgctgcacacccatccggccggctccgagctcctct 19903 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ctgacccaggacttctgcgtcgcc 74 ||||| |||||||||||||||||| Sbjct: 20182 ctgacgcaggacttctgcgtcgcc 20159
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 444 bits (224), Expect = e-121 Identities = 369/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Minus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 146611 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 146552 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 146551 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 146492 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 146491 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 146432 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 146431 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 146372 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 146371 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 146312 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 146311 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 146252 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 146251 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 146196 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 273 ggcggcgtcgtgccgatgcacacccacccggccgcctctgagctcctct 321 ||||||||||||||| |||||||||| ||||||| ||| |||||||||| Sbjct: 141378 ggcggcgtcgtgccgctgcacacccatccggccggctccgagctcctct 141330 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ctgacccaggacttctgcgtcgcc 74 ||||| |||||||||||||||||| Sbjct: 141609 ctgacgcaggacttctgcgtcgcc 141586
>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full insert sequence Length = 938 Score = 444 bits (224), Expect = e-121 Identities = 369/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 121 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 180 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 181 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 240 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 241 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 300 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 360 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 361 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 420 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 421 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 480 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 481 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 536
>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full insert sequence Length = 994 Score = 444 bits (224), Expect = e-121 Identities = 369/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 110 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 169 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 170 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 229 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 230 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 289 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 290 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 349 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 350 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 409 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 410 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 469 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 470 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 525
>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds Length = 642 Score = 444 bits (224), Expect = e-121 Identities = 369/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 20 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 79 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 80 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 139 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 140 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 199 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 200 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 259 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 260 gtatctccgcggcgaggctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 319 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 320 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 379 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 380 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 435
>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds Length = 994 Score = 436 bits (220), Expect = e-119 Identities = 368/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 122 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 181 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 182 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 241 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 242 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 301 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 361 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||||||| ||||||||||| || |||||||||||| | |||||||||| Sbjct: 362 gtatctccgcggcgaggctggacatcgccgtcgggggcgtcgtgccgctccacacccacc 421 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| |||||||| || || || ||||||| || Sbjct: 422 cggccgcctccgagctcctgttcgtcacccagggcaccgtcgccgccgggttcatcacct 481 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 482 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 537
>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds Length = 1004 Score = 428 bits (216), Expect = e-117 Identities = 367/416 (88%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 1 tgctccctgtcctcatctccttcctcgtcctgcccttctccgccatggccctgacccagg 60 ||||||| |||||| ||||||||||| | ||||| ||||| ||||||| ||||| |||| Sbjct: 102 tgctccccgtcctcctctccttcctcctgctgccattctcgtccatggcgctgacgcagg 161 Query: 61 acttctgcgtcgccgacccgtcctgcagcgacacgccggcggggtacccgtgcaagaccg 120 | |||||||||||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 162 atttctgcgtcgccgacctgacctgcagcgacacgccggcggggtacccgtgcaaggcca 221 Query: 121 gcgtcggcgcgggggacttctactaccacggcctcgccgccgcgggcaacaccagcaacc 180 |||||||||| || |||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 222 gcgtcggcgccggcgacttcgcctaccacggcctcgcggcggcgggcaacaccagcaacc 281 Query: 181 tcatcaaggcggccgtaaccccggccttcgtcggccagttccccggcgtgaacgggctcg 240 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 282 tcatcaaggccgccgtgacgccggccttcgtcggccagttccccggcgtgaacgggctcg 341 Query: 241 gcatctctgcggcgaggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacc 300 | ||||| ||||||| ||| ||||||||||| ||||||||||||||| | |||||||||| Sbjct: 342 gtatctccgcggcgaagctggacatcgccgtcggcggcgtcgtgccgctccacacccacc 401 Query: 301 cggccgcctctgagctcctcttcgtaaccgagggcaccatcttggcgggcttcatcagct 360 |||||||||| |||||||| ||||| ||| | |||||| || || || ||||||| || Sbjct: 402 cggccgcctccgagctcctgttcgtcacccaaggcaccgtcgccgccgggttcatcacct 461 Query: 361 cctcctcc-acaccgtgtacaccaagacgctctacaggggcgacatcatggtgttc 415 |||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct: 462 cctcctccaacaccgtctacaccaggacgctgtacgccggcgacatcatggtgttc 517
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and complete cds Length = 2490 Score = 311 bits (157), Expect = 1e-81 Identities = 341/401 (85%), Gaps = 1/401 (0%) Strand = Plus / Plus Query: 16 tctccttcctcgtcctgcccttctccgccatggccctgacccaggacttctgcgtcgccg 75 ||||||||||| | ||||||| || || | |||||||| ||||||||||||||||||| Sbjct: 1486 tctccttcctcctgatgcccttggcctccctagccctgacgcaggacttctgcgtcgccg 1545 Query: 76 acccgtcctgcagcgacacgccggcggggtacccgtgcaagaccggcgtcggcgcggggg 135 ||| | ||||||||||||||||||||||||||||||||||| || ||||| ||| | Sbjct: 1546 acctgacctgcagcgacacgccggcggggtacccgtgcaagtccagcgtcaccgccaacg 1605 Query: 136 acttctactaccacggcctcgccgccgcgggcaacaccagcaacctcatcaaggcggccg 195 ||||||||| ||||||||| |||| | |||||| | | | ||||||||||| |||| Sbjct: 1606 acttctacttccacggcctggccggccagggcaaaataaacccactcatcaaggccgccg 1665 Query: 196 taaccccggccttcgtcggccagttccccggcgtgaacgggctcggcatctctgcggcga 255 | |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 1666 tgaccccggccttcgtgggccagttcccgggcgtcaacgggcttggcatctctgcggcca 1725 Query: 256 ggctcgacatcgccgtgggcggcgtcgtgccgatgcacacccacccggccgcctctgagc 315 |||||||||||| |||||||||||||||||| |||||||||||||||| | ||| |||| Sbjct: 1726 ggctcgacatcgaggtgggcggcgtcgtgccgctgcacacccacccggcgggctcagagc 1785 Query: 316 tcctcttcgtaaccgagggcaccatcttggcgggcttcatcagctcctcctcc-acaccg 374 |||||||||| ||| |||||||| || || ||||||||||||||| |||| |||||| Sbjct: 1786 tcctcttcgtgacccagggcaccgtcgccgccggcttcatcagctccggctccaacaccg 1845 Query: 375 tgtacaccaagacgctctacaggggcgacatcatggtgttc 415 | ||||||||||| || ||| |||||||||||||||||| Sbjct: 1846 tctacaccaagacactgtacgccggcgacatcatggtgttc 1886
>ref|XM_471594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 46 tggccctgacccaggacttctgcgtcgccgacccgtcctgcagcgacacgccggcggggt 105 ||||||||| ||||||||||||||||| ||||| | || || ||||||||||||| || | Sbjct: 62 tggccctgaaccaggacttctgcgtcggcgacctggcccgcggcgacacgccggccggct 121 Query: 106 acccgtgcaag 116 ||||||||||| Sbjct: 122 acccgtgcaag 132 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 222 cccggcgtgaacgggctcggcatctc 247 ||||||||||||||||||| |||||| Sbjct: 244 cccggcgtgaacgggctcgacatctc 269
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03, complete sequence Length = 144146 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 46 tggccctgacccaggacttctgcgtcgccgacccgtcctgcagcgacacgccggcggggt 105 ||||||||| ||||||||||||||||| ||||| | || || ||||||||||||| || | Sbjct: 37464 tggccctgaaccaggacttctgcgtcggcgacctggcccgcggcgacacgccggccggct 37523 Query: 106 acccgtgcaag 116 ||||||||||| Sbjct: 37524 acccgtgcaag 37534 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 222 cccggcgtgaacgggctcggcatctc 247 ||||||||||||||||||| |||||| Sbjct: 37847 cccggcgtgaacgggctcgacatctc 37872
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 46 tggccctgacccaggacttctgcgtcgccgacccgtcctgcagcgacacgccggcggggt 105 ||||||||| ||||||||||||||||| ||||| | || || ||||||||||||| || | Sbjct: 12556761 tggccctgaaccaggacttctgcgtcggcgacctggcccgcggcgacacgccggccggct 12556702 Query: 106 acccgtgcaag 116 ||||||||||| Sbjct: 12556701 acccgtgcaag 12556691 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 cccggcgtgaacgggctcggcatctc 247 ||||||||||||||||||| |||||| Sbjct: 12556378 cccggcgtgaacgggctcgacatctc 12556353 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cttctgcgtcgccgacccgt 81 |||||||||||||||||||| Sbjct: 6446347 cttctgcgtcgccgacccgt 6446328
>ref|XM_482785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 273 ggcggcgtcgtgccgatgcacacccacccggccgcctctgagctcctct 321 ||||||||||||||| |||||||||| ||||||| ||| |||||||||| Sbjct: 310 ggcggcgtcgtgccgctgcacacccatccggccggctccgagctcctct 358 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ctgacccaggacttctgcgtcgcc 74 ||||| |||||||||||||||||| Sbjct: 79 ctgacgcaggacttctgcgtcgcc 102
>ref|XM_476095.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacccg 80 ||||||||||||||||||||||||| Sbjct: 102 ccaggacttctgcgtcgccgacccg 126
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07, complete sequence Length = 114135 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacccg 80 ||||||||||||||||||||||||| Sbjct: 111034 ccaggacttctgcgtcgccgacccg 111058
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacccg 80 ||||||||||||||||||||||||| Sbjct: 41844 ccaggacttctgcgtcgccgacccg 41868
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacccg 80 ||||||||||||||||||||||||| Sbjct: 5904270 ccaggacttctgcgtcgccgacccg 5904294
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 238 ccaggacttctgcgtcgccgacc 260
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 102 ccaggacttctgcgtcgccgacc 124
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 149 cggcctcgccgccgcgggcaaca 171 ||||||||||||||||||||||| Sbjct: 2543186 cggcctcgccgccgcgggcaaca 2543208
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 27500440 ccaggacttctgcgtcgccgacc 27500418 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 27493120 ccaggacttctgcgtcgccgacc 27493098
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 149 cggcctcgccgccgcgggcaaca 171 ||||||||||||||||||||||| Sbjct: 3495737 cggcctcgccgccgcgggcaaca 3495759
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 27591763 ccaggacttctgcgtcgccgacc 27591741 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 27584443 ccaggacttctgcgtcgccgacc 27584421
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 57394 ccaggacttctgcgtcgccgacc 57416 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 50074 ccaggacttctgcgtcgccgacc 50096
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 ccaggacttctgcgtcgccgacc 78 ||||||||||||||||||||||| Sbjct: 249 ccaggacttctgcgtcgccgacc 271
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 149 cggcctcgccgccgcgggcaaca 171 ||||||||||||||||||||||| Sbjct: 1370699 cggcctcgccgccgcgggcaaca 1370677
>gb|BC101772.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor, mRNA (cDNA clone MGC:126821 IMAGE:8069278), complete cds Length = 3675 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1224 cttcatcagctcctcctccaca 1203
>gb|BC101774.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor, mRNA (cDNA clone MGC:126823 IMAGE:8069280), complete cds Length = 3675 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1224 cttcatcagctcctcctccaca 1203
>ref|XM_515467.1| PREDICTED: Pan troglodytes LOC459223 (LOC459223), mRNA Length = 3820 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1267 cttcatcagctcctcctccaca 1246
>ref|NM_172311.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor (SALF), mRNA Length = 3824 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1311 cttcatcagctcctcctccaca 1290
>gb|AF541879.1| Branchiostoma floridae amphioxus dachshund mRNA, complete cds Length = 2656 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 364 cctccacaccgtgtacaccaag 385 |||||||||||||||||||||| Sbjct: 629 cctccacaccgtgtacaccaag 650
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 caggacttctgcgtcgccgacc 78 |||||||||||||||||||||| Sbjct: 85 caggacttctgcgtcgccgacc 106
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 caggacttctgcgtcgccgacc 78 |||||||||||||||||||||| Sbjct: 85 caggacttctgcgtcgccgacc 106
>emb|CR936807.1| Homo sapiens mRNA; cDNA DKFZp781K2462 (from clone DKFZp781K2462) Length = 5620 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1392 cttcatcagctcctcctccaca 1371
>emb|CR859409.1| Pongo pygmaeus mRNA; cDNA DKFZp469K176 (from clone DKFZp469K176) Length = 5526 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1287 cttcatcagctcctcctccaca 1266
>ref|NM_006873.2| Homo sapiens stonin 1 (STON1), mRNA Length = 5822 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1207 cttcatcagctcctcctccaca 1186
>gb|AF255310.1|AF255310 Homo sapiens stonin 1 mRNA, complete cds Length = 2509 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1207 cttcatcagctcctcctccaca 1186
>gb|AY026319.1| Homo sapiens stoned B-like factor SBLF (SBLF) mRNA, complete cds Length = 2208 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1197 cttcatcagctcctcctccaca 1176
>gb|AC073082.6| Homo sapiens BAC clone RP11-310N16 from 2, complete sequence Length = 177047 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 122668 cttcatcagctcctcctccaca 122689
>gb|AC007242.3| Homo sapiens BAC clone RP11-182H9 from 2, complete sequence Length = 112748 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ctccctgtcctcatctccttcc 24 |||||||||||||||||||||| Sbjct: 68375 ctccctgtcctcatctccttcc 68354
>gb|AF026169.1|AF026169 Homo sapiens SALF (SALF) mRNA, complete cds Length = 3824 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 cttcatcagctcctcctccaca 371 |||||||||||||||||||||| Sbjct: 1311 cttcatcagctcctcctccaca 1290
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel gene, the FOXP4 gene for forkhead box P4 and five CpG islands, complete sequence Length = 180547 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 gccgcctctgagctcctcttc 323 ||||||||||||||||||||| Sbjct: 166376 gccgcctctgagctcctcttc 166396
>gb|AC125255.15| Mus musculus chromosome 5, clone RP24-332C17, complete sequence Length = 173258 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ctgtcctcatctccttcctc 26 |||||||||||||||||||| Sbjct: 43657 ctgtcctcatctccttcctc 43676
>gb|AY424891.1| Toxoplasma gondii UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase T2 gene, complete cds Length = 10000 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 cttcctcgtcctgcccttctccgc 43 |||||||||||||||| ||||||| Sbjct: 8749 cttcctcgtcctgcccctctccgc 8726
>gb|AY136814.1| Toxoplasma gondii UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase T2 mRNA, complete cds Length = 2079 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 cttcctcgtcctgcccttctccgc 43 |||||||||||||||| ||||||| Sbjct: 1921 cttcctcgtcctgcccctctccgc 1898
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gcttcatcagctcctcctcc 368 |||||||||||||||||||| Sbjct: 2528913 gcttcatcagctcctcctcc 2528932
>emb|AL645817.1| Human DNA sequence from clone RP1-2A2 on chromosome Xq21, complete sequence Length = 129249 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccttcctcgtcctgcccttct 39 ||||||||||| |||||||||||| Sbjct: 59426 tctccttcctcctcctgcccttct 59449
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgtcctgcagcgacacgccg 98 |||||||||||||||||||| Sbjct: 816178 cgtcctgcagcgacacgccg 816197
>emb|AL137793.16| Human DNA sequence from clone RP5-1065P14 on chromosome 1q41-42.2 Contains a novel pseudogene and a novel gene, complete sequence Length = 138419 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cccggccgcctctgagctcc 318 |||||||||||||||||||| Sbjct: 114020 cccggccgcctctgagctcc 114001
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 cccggccttcgtcggccagttccccggc 227 ||||||||||| |||||| ||||||||| Sbjct: 4472214 cccggccttcgccggccatttccccggc 4472241
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 gacttctgcgtcgccgacccgtcc 83 |||||| ||||||||||||||||| Sbjct: 264951 gacttccgcgtcgccgacccgtcc 264974
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcgccgccgcgggcaacacc 173 |||||||||||||||||||| Sbjct: 134930 tcgccgccgcgggcaacacc 134911
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cttctgcgtcgccgacccgt 81 |||||||||||||||||||| Sbjct: 595 cttctgcgtcgccgacccgt 576
>gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of the complete genome Length = 11137 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gctcgacatcgccgtgggcg 276 |||||||||||||||||||| Sbjct: 2330 gctcgacatcgccgtgggcg 2311
>ref|NM_079502.2| Drosophila melanogaster Karyopherin 3 CG1059-RA (Karybeta3), mRNA Length = 4331 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cagctcctcctccacaccgt 375 |||||||||||||||||||| Sbjct: 2951 cagctcctcctccacaccgt 2932
>gb|AY052104.1| Drosophila melanogaster SD05186 full length cDNA Length = 2701 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cagctcctcctccacaccgt 375 |||||||||||||||||||| Sbjct: 1317 cagctcctcctccacaccgt 1298
>gb|AC007691.4|AC007691 Drosophila melanogaster, chromosome 3R, region 82B-82C, BAC clone BACR07E06, complete sequence Length = 171629 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cagctcctcctccacaccgt 375 |||||||||||||||||||| Sbjct: 156308 cagctcctcctccacaccgt 156289
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 cacccacccggccgcctctg 312 |||||||||||||||||||| Sbjct: 21271687 cacccacccggccgcctctg 21271706
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cggcgtgaacgggctcggca 243 |||||||||||||||||||| Sbjct: 70720 cggcgtgaacgggctcggca 70701
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 cacccacccggccgcctctg 312 |||||||||||||||||||| Sbjct: 169196 cacccacccggccgcctctg 169215
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tcgtcggccagttccccggc 227 |||||||||||||||||||| Sbjct: 6983636 tcgtcggccagttccccggc 6983655
>gb|BT003793.1| Drosophila melanogaster GH07384 full insert cDNA Length = 3940 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cagctcctcctccacaccgt 375 |||||||||||||||||||| Sbjct: 2952 cagctcctcctccacaccgt 2933
>emb|Z84816.1|HS2A2B Human DNA sequence from PAC 2A2 on chromosome X contains ESTs Length = 96355 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccttcctcgtcctgcccttct 39 ||||||||||| |||||||||||| Sbjct: 36930 tctccttcctcctcctgcccttct 36907
>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence Length = 173474 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ccttctccgccatggccctg 53 |||||||||||||||||||| Sbjct: 114913 ccttctccgccatggccctg 114932
>gb|AE003605.3| Drosophila melanogaster chromosome 3R, section 3 of 118 of the complete sequence Length = 273418 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cagctcctcctccacaccgt 375 |||||||||||||||||||| Sbjct: 84494 cagctcctcctccacaccgt 84475
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cttctgcgtcgccgacccgt 81 |||||||||||||||||||| Sbjct: 108496 cttctgcgtcgccgacccgt 108477
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 gcttcatcagctcctcctcc 368 |||||||||||||||||||| Sbjct: 111960 gcttcatcagctcctcctcc 111941 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,850,904 Number of Sequences: 3902068 Number of extensions: 2850904 Number of successful extensions: 76660 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75401 Number of HSP's gapped (non-prelim): 1233 length of query: 415 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 393 effective length of database: 17,147,199,772 effective search space: 6738849510396 effective search space used: 6738849510396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)