>SER1_GALME (O96614) Sericin-1 (Silk gum protein 1) (Fragment)|
          Length = 115

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/73 (26%), Positives = 29/73 (39%)
 Frame = +1

Query: 166 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 345
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 20  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 79

Query: 346 HPXTCSHHPASGS 384
              + S   ++GS
Sbjct: 80  SSGSSSSSSSNGS 92



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/73 (26%), Positives = 28/73 (38%)
 Frame = +1

Query: 166 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 345
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 11  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 70

Query: 346 HPXTCSHHPASGS 384
              +     +SGS
Sbjct: 71  SSGSSGSSGSSGS 83



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/73 (26%), Positives = 28/73 (38%)
 Frame = +1

Query: 166 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 345
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 8   SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 67

Query: 346 HPXTCSHHPASGS 384
              +     +SGS
Sbjct: 68  SSGSSGSSGSSGS 80



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/73 (26%), Positives = 28/73 (38%)
 Frame = +1

Query: 166 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 345
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 5   SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 64

Query: 346 HPXTCSHHPASGS 384
              +     +SGS
Sbjct: 65  SSGSSGSSGSSGS 77



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/73 (26%), Positives = 28/73 (38%)
 Frame = +1

Query: 166 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 345
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 2   SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 61

Query: 346 HPXTCSHHPASGS 384
              +     +SGS
Sbjct: 62  SSGSSGSSGSSGS 74



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/73 (24%), Positives = 28/73 (38%)
 Frame = +1

Query: 166 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 345
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 23  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 82

Query: 346 HPXTCSHHPASGS 384
              + S + +  S
Sbjct: 83  SSSSSSSNGSGSS 95



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/60 (26%), Positives = 24/60 (40%)
 Frame = +1

Query: 166 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 345
           SSG   +S S  + G   +S +  SSG++                      SSGS +S+G
Sbjct: 44  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSSSSSSNGSGSSSGSSQSSG 103

>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major|
            vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I)
            (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II)
            (LVII); YGP40]
          Length = 1850

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/77 (24%), Positives = 30/77 (38%)
 Frame = +1

Query: 148  ASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSG 327
            +S   RSS    +SSS+    +  +SS++ SS ++                      SS 
Sbjct: 1200 SSSSSRSSSSSSSSSSN---SKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSS 1256

Query: 328  SHKSAGHPXTCSHHPAS 378
            S  S+    + SHH  S
Sbjct: 1257 SRSSSSSSKSSSHHSHS 1273

>RPTN_MOUSE (P97347) Repetin|
          Length = 1130

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/39 (43%), Positives = 17/39 (43%)
 Frame = +1

Query: 139 RQPASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTND 255
           RQ  S  Q   GRQ  SS     GRQ  SS Q   G  D
Sbjct: 432 RQDQSSHQGQKGRQDQSSHQGQKGRQDQSSHQGQKGRQD 470



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/39 (43%), Positives = 17/39 (43%)
 Frame = +1

Query: 139 RQPASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTND 255
           RQ  S  Q   GRQ  SS     GRQ  SS Q   G  D
Sbjct: 420 RQDQSPHQGQKGRQDQSSHQGQKGRQDQSSHQGQKGRQD 458

>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner|
           cell wall protein)
          Length = 238

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 22/118 (18%), Positives = 31/118 (26%), Gaps = 2/118 (1%)
 Frame = +1

Query: 37  ENXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXCRQPASCPQRSSGRQPASSSHRAPGRQ 216
           +N                S                   +    +S    ASSS  AP   
Sbjct: 86  QNASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSSASSSTKASSSSAAPSSS 145

Query: 217 PASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGS--HKSAGHPXTCSHHPASGS 384
            ASS + SS ++                   +  SS S  H S+    T S    S +
Sbjct: 146 KASSTESSSSSSSSTKAPSSEESSSTYVSSSKQASSTSEAHSSSAASSTVSQETVSSA 203

>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)|
          Length = 332

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/65 (20%), Positives = 25/65 (38%)
 Frame = +1

Query: 184 ASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAGHPXTCS 363
           A+ +H A     A+ A  ++  +                    H ++ +H +A H  T +
Sbjct: 246 AADAHHATDAHHAADAHHATDAHHAADAHHAADAHHATDSHHAHHAADAHHAAAHHATDA 305

Query: 364 HHPAS 378
           HH A+
Sbjct: 306 HHAAA 310

>MSX1_CHICK (P28361) Homeobox protein MSX-1 (Msh homeobox 1-like protein)|
           (CHOX-7)
          Length = 249

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 139 RQPASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTND 255
           R   S P    GRQ  S   RAP R+P+   +   G  D
Sbjct: 21  RWKGSWPTAERGRQRRSRGFRAPSRRPSQPRRSDDGGTD 59

>TOP2_PEA (O24308) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
            (PsTopII)
          Length = 1462

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +1

Query: 142  QPASCPQRSSGRQPASSSHR-----APGRQPASSAQRSSGT 249
            Q  + P +  GR+PA+ + +     AP + PA+  +RS GT
Sbjct: 1302 QQKAAPVKKGGRKPAAQNAKKAPAKAPAKAPAAPKKRSVGT 1342

>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
 Frame = +1

Query: 169 SGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSA-- 342
           SG+   S  H +     +S  Q  SG++                   RH SS  H S+  
Sbjct: 733 SGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHG 792

Query: 343 --GHPXTCSH---HPASGSPDA 393
             G   +CS    H  SGS  A
Sbjct: 793 QHGSGTSCSSSCGHYESGSGQA 814

>HPAB3_PSEYM (Q8RP04) Effector protein hopAB3 (Avirulence protein hopPmaL) (Type|
           III effector hopPmaL)
          Length = 385

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +1

Query: 163 RSSGRQPASSSHRAPGRQPA--SSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHK 336
           R+  R P  SS R P R PA  ++ + SSG+N                   R PSS S+ 
Sbjct: 222 RAPARTPPRSSVRTPERSPAPRTATESSSGSNQ---RSLLGRFAGLMTSNQRRPSSASNA 278

Query: 337 S 339
           S
Sbjct: 279 S 279

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/77 (25%), Positives = 29/77 (37%)
 Frame = +1

Query: 163  RSSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSA 342
            R+S RQ +S S  +     +  ++R SG+                    RHP S     A
Sbjct: 937  RTSRRQGSSVSQDSDSEGHSEDSERWSGS---ASRNHRGSAQEQSRHGSRHPRSHHEDRA 993

Query: 343  GHPXTCSHHPASGSPDA 393
            GH  +      SG+P A
Sbjct: 994  GHGHSADSSRQSGTPHA 1010

>RFIP3_HUMAN (O75154) Rab11 family-interacting protein 3 (Rab11-FIP3) (EF|
           hands-containing Rab-interacting protein) (Eferin)
          Length = 756

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +1

Query: 145 PASCPQRSSGR-QPASSSHRAPG 210
           PASCP+ +  R Q +SSSHRA G
Sbjct: 134 PASCPESAPFRLQGSSSSHRARG 156

>CARP7_CANAL (P43096) Candidapepsin-7 precursor (EC 3.4.23.24) (Aspartate|
           protease 7) (ACP 7) (Secreted aspartic protease 7)
          Length = 588

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 148 ASCPQRSSGRQPASSSHRAPGRQPASSAQRSSG 246
           AS    SS  + ASSS  +   QP+SSA + +G
Sbjct: 181 ASSASSSSSSEAASSSQPSEDSQPSSSANKKTG 213

>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2|
          Length = 964

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 142 QPASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGT 249
           +P   P+ + G +P SSS   PGR   SSA R+S T
Sbjct: 90  KPGPGPKPTPGPRPGSSSGPKPGR---SSAARTSAT 122

>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/81 (22%), Positives = 27/81 (33%)
 Frame = +1

Query: 145 PASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSS 324
           P++ P   +    ASSS  +     +SSA  SS ++                      S 
Sbjct: 576 PSASPSSQAAVAAASSSSASSSSASSSSASSSSASSSSASSSSASSSSASSSAGGAGGSV 635

Query: 325 GSHKSAGHPXTCSHHPASGSP 387
            S   AG     S  P + +P
Sbjct: 636 ASASGAGERRETSLGPRAAAP 656


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.306    0.117    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,272,504
Number of Sequences: 219361
Number of extensions: 269414
Number of successful extensions: 1248
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)