ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet93b09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 133 bits (67), Expect = 5e-28 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 251 tggccgctcctctgccttctccgtcgactcggccgcc---gccacgcccacctcgtcccc 307 |||||||||||| | ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 7960 tggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctcccc 8019 Query: 308 gccgcgcccgcaccgcgcgggcgacgtggcgtgggcgcccatccgtgccgccctggcgcc 367 ||| |||||||||||||||| |||||| || |||||||||||||| |||||| ||||| Sbjct: 8020 gcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgcc 8079 Query: 368 gctcggcccgcgggact 384 ||||||||||||||||| Sbjct: 8080 gctcggcccgcgggact 8096
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 133 bits (67), Expect = 5e-28 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Minus Query: 251 tggccgctcctctgccttctccgtcgactcggccgcc---gccacgcccacctcgtcccc 307 |||||||||||| | ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 4086 tggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctcccc 4027 Query: 308 gccgcgcccgcaccgcgcgggcgacgtggcgtgggcgcccatccgtgccgccctggcgcc 367 ||| |||||||||||||||| |||||| || |||||||||||||| |||||| ||||| Sbjct: 4026 gcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgcc 3967 Query: 368 gctcggcccgcgggact 384 ||||||||||||||||| Sbjct: 3966 gctcggcccgcgggact 3950
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 133 bits (67), Expect = 5e-28 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 251 tggccgctcctctgccttctccgtcgactcggccgcc---gccacgcccacctcgtcccc 307 |||||||||||| | ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 24631774 tggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctcccc 24631833 Query: 308 gccgcgcccgcaccgcgcgggcgacgtggcgtgggcgcccatccgtgccgccctggcgcc 367 ||| |||||||||||||||| |||||| || |||||||||||||| |||||| ||||| Sbjct: 24631834 gcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgcc 24631893 Query: 368 gctcggcccgcgggact 384 ||||||||||||||||| Sbjct: 24631894 gctcggcccgcgggact 24631910 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 18942141 cgagcagcagcagcacggctg 18942121 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ccccgccgcgcccgcaccgc 323 |||||||||||||||||||| Sbjct: 30157791 ccccgccgcgcccgcaccgc 30157810 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 19587992 gcgcgggcgacgcggcgtgggcgc 19587969 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 18642566 gcgcgggcgacgcggcgtgggcgc 18642543
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 133 bits (67), Expect = 5e-28 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 251 tggccgctcctctgccttctccgtcgactcggccgcc---gccacgcccacctcgtcccc 307 |||||||||||| | ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 63820 tggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctcccc 63879 Query: 308 gccgcgcccgcaccgcgcgggcgacgtggcgtgggcgcccatccgtgccgccctggcgcc 367 ||| |||||||||||||||| |||||| || |||||||||||||| |||||| ||||| Sbjct: 63880 gcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgcc 63939 Query: 368 gctcggcccgcgggact 384 ||||||||||||||||| Sbjct: 63940 gctcggcccgcgggact 63956
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 133 bits (67), Expect = 5e-28 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 251 tggccgctcctctgccttctccgtcgactcggccgcc---gccacgcccacctcgtcccc 307 |||||||||||| | ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 24549243 tggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctcccc 24549302 Query: 308 gccgcgcccgcaccgcgcgggcgacgtggcgtgggcgcccatccgtgccgccctggcgcc 367 ||| |||||||||||||||| |||||| || |||||||||||||| |||||| ||||| Sbjct: 24549303 gcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgcc 24549362 Query: 368 gctcggcccgcgggact 384 ||||||||||||||||| Sbjct: 24549363 gctcggcccgcgggact 24549379 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 18936182 cgagcagcagcagcacggctg 18936162 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ccccgccgcgcccgcaccgc 323 |||||||||||||||||||| Sbjct: 30249213 ccccgccgcgcccgcaccgc 30249232 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 19581019 gcgcgggcgacgcggcgtgggcgc 19580996 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 18636607 gcgcgggcgacgcggcgtgggcgc 18636584
>emb|CR860222.1| Pongo pygmaeus mRNA; cDNA DKFZp469N2119 (from clone DKFZp469N2119) Length = 2806 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 209 ctccagctccagcgtcagctccgc 232 |||||||||||||||||||||||| Sbjct: 508 ctccagctccagcgtcagctccgc 531
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 48.1 bits (24), Expect = 0.021 Identities = 54/64 (84%) Strand = Plus / Plus Query: 288 gccacgcccacctcgtccccgccgcgcccgcaccgcgcgggcgacgtggcgtgggcgccc 347 ||||| |||||||| |||| || |||||||||| ||||| |||| | || ||||||||| Sbjct: 4958 gccacacccacctcttccctaccacgcccgcaccacgcggccgacctcgcttgggcgccc 5017 Query: 348 atcc 351 |||| Sbjct: 5018 atcc 5021
>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0091J06 from chromosome 10, complete sequence Length = 141911 Score = 48.1 bits (24), Expect = 0.021 Identities = 54/64 (84%) Strand = Plus / Minus Query: 288 gccacgcccacctcgtccccgccgcgcccgcaccgcgcgggcgacgtggcgtgggcgccc 347 ||||| |||||||| |||| || |||||||||| ||||| |||| | || ||||||||| Sbjct: 54568 gccacacccacctcttccctaccacgcccgcaccacgcggccgacctcgcttgggcgccc 54509 Query: 348 atcc 351 |||| Sbjct: 54508 atcc 54505
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.021 Identities = 54/64 (84%) Strand = Plus / Minus Query: 288 gccacgcccacctcgtccccgccgcgcccgcaccgcgcgggcgacgtggcgtgggcgccc 347 ||||| |||||||| |||| || |||||||||| ||||| |||| | || ||||||||| Sbjct: 11361497 gccacacccacctcttccctaccacgcccgcaccacgcggccgacctcgcttgggcgccc 11361438 Query: 348 atcc 351 |||| Sbjct: 11361437 atcc 11361434 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gccgccgccacgcccacctc 301 |||||||||||||||||||| Sbjct: 19307768 gccgccgccacgcccacctc 19307749 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccgccgcgcccgcaccgcgc 325 |||||||||||||||||||| Sbjct: 11811128 ccgccgcgcccgcaccgcgc 11811147
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.021 Identities = 54/64 (84%) Strand = Plus / Minus Query: 288 gccacgcccacctcgtccccgccgcgcccgcaccgcgcgggcgacgtggcgtgggcgccc 347 ||||| |||||||| |||| || |||||||||| ||||| |||| | || ||||||||| Sbjct: 11367937 gccacacccacctcttccctaccacgcccgcaccacgcggccgacctcgcttgggcgccc 11367878 Query: 348 atcc 351 |||| Sbjct: 11367877 atcc 11367874 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gccgccgccacgcccacctc 301 |||||||||||||||||||| Sbjct: 19319044 gccgccgccacgcccacctc 19319025 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccgccgcgcccgcaccgcgc 325 |||||||||||||||||||| Sbjct: 11818468 ccgccgcgcccgcaccgcgc 11818487
>ref|XM_463317.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1014 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 324 gcgggcgacgtggcgtgggcgcccatccgtgccgc 358 |||| |||||| || |||||||||||||||||||| Sbjct: 356 gcggccgacgtcgcctgggcgcccatccgtgccgc 322
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Minus Query: 264 gccttctccgtcgactcggccgccgcc 290 ||||||||||||| ||||||||||||| Sbjct: 45534 gccttctccgtcgcctcggccgccgcc 45508
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 324 gcgggcgacgtggcgtgggcgcccatccgtgccgc 358 |||| |||||| || |||||||||||||||||||| Sbjct: 21806008 gcggccgacgtcgcctgggcgcccatccgtgccgc 21806042
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 324 gcgggcgacgtggcgtgggcgcccatccgtgccgc 358 |||| |||||| || |||||||||||||||||||| Sbjct: 35301 gcggccgacgtcgcctgggcgcccatccgtgccgc 35335
>ref|XM_518433.1| PREDICTED: Pan troglodytes bromodomain and PHD finger containing, 3 (LOC462645), mRNA Length = 3816 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 gtccccgccgcgcccgcaccgc 323 |||||||||||||||||||||| Sbjct: 147 gtccccgccgcgcccgcaccgc 168
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gcgagcagccacgcgcgcgcgc 89 |||||||||||||||||||||| Sbjct: 1197148 gcgagcagccacgcgcgcgcgc 1197127 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 ctccgcgagcagcagcagcac 247 ||||||||||||||||||||| Sbjct: 282868 ctccgcgagcagcagcagcac 282888
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 gcgagcagccacgcgcgcgcgc 89 |||||||||||||||||||||| Sbjct: 2318937 gcgagcagccacgcgcgcgcgc 2318958 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 ctccgcgagcagcagcagcac 247 ||||||||||||||||||||| Sbjct: 965149 ctccgcgagcagcagcagcac 965169 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cgcccgacgccgcgccggcg 203 |||||||||||||||||||| Sbjct: 2210903 cgcccgacgccgcgccggcg 2210922 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgagcagccacgcgcgcgcg 88 |||||||||||||||||||| Sbjct: 293714 cgagcagccacgcgcgcgcg 293695
>emb|Z84485.1|HS524E15 Human DNA sequence from clone RP3-524E15 on chromosome 6p21 Contains the BRPF3 gene for bromodomain and PHD finger containing protein 3 and a CpG Island, complete sequence Length = 80908 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 gtccccgccgcgcccgcaccgc 323 |||||||||||||||||||||| Sbjct: 49991 gtccccgccgcgcccgcaccgc 49970
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gcgagcagccacgcgcgcgcgc 89 |||||||||||||||||||||| Sbjct: 2066154 gcgagcagccacgcgcgcgcgc 2066133 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 ctccgcgagcagcagcagcac 247 ||||||||||||||||||||| Sbjct: 807678 ctccgcgagcagcagcagcac 807698 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cgcccgacgccgcgccggcg 203 |||||||||||||||||||| Sbjct: 2163755 cgcccgacgccgcgccggcg 2163736 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgagcagccacgcgcgcgcg 88 |||||||||||||||||||| Sbjct: 71005 cgagcagccacgcgcgcgcg 70986
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 320 ccgcgcgggcgacgtggcgtgg 341 |||||||||||||||||||||| Sbjct: 3630447 ccgcgcgggcgacgtggcgtgg 3630426
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 320 ccgcgcgggcgacgtggcgtgg 341 |||||||||||||||||||||| Sbjct: 3627873 ccgcgcgggcgacgtggcgtgg 3627852
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gcgagcagccacgcgcgcgcgc 89 |||||||||||||||||||||| Sbjct: 2720231 gcgagcagccacgcgcgcgcgc 2720210 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 cgcgagcagcagcagcacgg 249 |||||||||||||||||||| Sbjct: 2637844 cgcgagcagcagcagcacgg 2637825 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgagcagccacgcgcgcgcg 88 |||||||||||||||||||| Sbjct: 68975 cgagcagccacgcgcgcgcg 68956
>gb|AY675303.1| Human adenovirus type 20 polypeptide IX gene, complete cds Length = 402 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 agctccgcgagcagcagcagca 246 |||||||||||||||||||||| Sbjct: 371 agctccgcgagcagcagcagca 392
>gb|AF332964.1| Polytomella sp. Pringsheim 198.80 protoporphyrinogen oxidase mRNA, complete cds Length = 2060 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 109 ccaccacggcgtcctcgtcccc 130 |||||||||||||||||||||| Sbjct: 1201 ccaccacggcgtcctcgtcccc 1180
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 accaccacggcgtcctcgtcc 128 ||||||||||||||||||||| Sbjct: 3610747 accaccacggcgtcctcgtcc 3610767
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 116401 cgagcagcagcagcacggctg 116381
>gb|AC146525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0060D22 map near S6115, complete sequence Length = 139929 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 4183 cgagcagcagcagcacggctg 4203
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 acctccccgacacgcccgacg 192 ||||||||||||||||||||| Sbjct: 1499405 acctccccgacacgcccgacg 1499385
>gb|AC126057.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026D16, complete sequence Length = 129166 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 24077 cgagcagcagcagcacggctg 24097
>gb|AC144453.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0050A24, complete sequence Length = 142574 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 133781 cgagcagcagcagcacggctg 133761
>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0025G07, complete sequence Length = 167136 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 57203 cgagcagcagcagcacggctg 57183
>emb|AL160032.14| Human DNA sequence from clone RP11-474L7 on chromosome 13 Contains the 3' end of the KLF12 gene for Kruppel-like factor 12, a novel gene and the 5' end of a novel gene and a CpG island, complete sequence Length = 181324 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 tctatccagagcttccagcca 65 ||||||||||||||||||||| Sbjct: 30251 tctatccagagcttccagcca 30231
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 132104 cgagcagcagcagcacggctg 132124
>emb|AL731614.4|OSJN00260 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079F16, complete sequence Length = 157801 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 58763 cgagcagcagcagcacggctg 58743
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 108587 cgagcagcagcagcacggctg 108607
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 gcccgacgccgcgccggcgcc 205 ||||||||||||||||||||| Sbjct: 4847568 gcccgacgccgcgccggcgcc 4847548
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 11890168 cgagcagcagcagcacggctg 11890148
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 14240980 cgagcagcagcagcacggctg 14240960 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 acgcccacctcgtccccgccgcgc 314 |||||||||||||||||| ||||| Sbjct: 1853754 acgcccacctcgtccccgtcgcgc 1853731
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 25796244 cgagcagcagcagcacggctg 25796264 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 20825043 cgagcagcagcagcacggctg 20825063 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 16251413 cgagcagcagcagcacggctg 16251393 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 12371314 cgagcagcagcagcacggctg 12371294 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 acgcccacctcgtccccgccgcgc 314 |||||||||||||||||| ||||| Sbjct: 1927945 acgcccacctcgtccccgtcgcgc 1927922
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 12180091 cgagcagcagcagcacggctg 12180071 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 8617752 gcgcgggcgacgcggcgtgggcgc 8617729
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 tccagcgtcagctccgcgagc 236 ||||||||||||||||||||| Sbjct: 1018411 tccagcgtcagctccgcgagc 1018391
>gb|AC135560.4| Oryza sativa chromosome 3 BAC OSJNBa0031I04 genomic sequence, complete sequence Length = 168859 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 57500 cgagcagcagcagcacggctg 57520
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgcgagcagccacgcgcgcgc 87 ||||||||||||||||||||| Sbjct: 3506117 cgcgagcagccacgcgcgcgc 3506137 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 cctccccgacacgcccgacgccgcgccg 200 |||||||| || |||||||||||||||| Sbjct: 2249139 cctccccggcaagcccgacgccgcgccg 2249112 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgcccgcaccgcgcgggcga 331 |||||||||||||||||||| Sbjct: 893870 cgcccgcaccgcgcgggcga 893889
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 cccaccaccacggcgtcctcg 125 ||||||||||||||||||||| Sbjct: 1501733 cccaccaccacggcgtcctcg 1501753
>emb|AJ336973.1|HSA336973 Homo sapiens genomic sequence surrounding NotI site, clone NR1-AM3C Length = 643 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 ccctggcgccgctcggcccgcggga 382 ||||||||||||||||||| ||||| Sbjct: 280 ccctggcgccgctcggcccacggga 256
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 26114914 cgagcagcagcagcacggctg 26114934 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 21135278 cgagcagcagcagcacggctg 21135298 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 16341395 cgagcagcagcagcacggctg 16341375 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 12450621 cgagcagcagcagcacggctg 12450601 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 acgcccacctcgtccccgccgcgc 314 |||||||||||||||||| ||||| Sbjct: 1925667 acgcccacctcgtccccgtcgcgc 1925644 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 992526 gcgcgggcgacgcggcgtgggcgc 992503
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 14195260 cgagcagcagcagcacggctg 14195240 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 acgcccacctcgtccccgccgcgc 314 |||||||||||||||||| ||||| Sbjct: 1853732 acgcccacctcgtccccgtcgcgc 1853709
>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141067 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cgagcagcagcagcacggctg 252 ||||||||||||||||||||| Sbjct: 36598 cgagcagcagcagcacggctg 36578
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 cccaccaccacggcgtcctcg 125 ||||||||||||||||||||| Sbjct: 1176393 cccaccaccacggcgtcctcg 1176413
>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene island PAGI-3(SG) Length = 128136 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgctcccaccaccacggcgtcctcg 125 |||||||||| |||||||||||||| Sbjct: 56036 cgctcccaccgccacggcgtcctcg 56012
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atggccgctcccaccaccac 115 |||||||||||||||||||| Sbjct: 2490 atggccgctcccaccaccac 2471
>ref|XM_466796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 gccgccgccacgcccacctcgtcc 305 |||||||||||| ||||||||||| Sbjct: 542 gccgccgccacggccacctcgtcc 519
>ref|NM_197334.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBa0026L12.29), mRNA Length = 1451 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gccgccgccacgcccacctc 301 |||||||||||||||||||| Sbjct: 111 gccgccgccacgcccacctc 92
>ref|NM_196191.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0032N04.22), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccgccgcgcccgcaccgcgc 325 |||||||||||||||||||| Sbjct: 243 ccgccgcgcccgcaccgcgc 262
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 103324 gcgcgggcgacgcggcgtgggcgc 103301
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 tgctgcagcccgcgccgcacctccccga 181 |||||||||||||||||| ||| ||||| Sbjct: 433506 tgctgcagcccgcgccgcgcctgcccga 433479
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 acgcccacctcgtccccgccgcgc 314 |||||||||||||||||| ||||| Sbjct: 59602 acgcccacctcgtccccgtcgcgc 59579
>gb|AC105743.8| Oryza sativa chromosome 3 BAC OSJNBa0035N15 genomic sequence, complete sequence Length = 171120 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 135319 gcgcgggcgacgcggcgtgggcgc 135342
>gb|AC150775.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0048P17,complete sequence Length = 137127 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 70214 gcgcgggcgacgcggcgtgggcgc 70191
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01, complete sequence Length = 156691 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 26175 gcgcgggcgacgcggcgtgggcgc 26152
>ref|XM_365730.1| Magnaporthe grisea 70-15 hypothetical protein (MG02432.4) partial mRNA Length = 3378 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcccgacgccgcgccggcgcccaa 208 |||||| ||||||||||||||||| Sbjct: 459 gcccgaggccgcgccggcgcccaa 482
>ref|XM_418662.1| PREDICTED: Gallus gallus similar to MGC68843 protein (LOC420561), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 gtgccgccctggcgccgctcggcc 375 |||||||||||||||||| ||||| Sbjct: 467 gtgccgccctggcgccgcgcggcc 490
>ref|NM_174899.3| Homo sapiens F-box protein 36 (FBXO36), mRNA Length = 924 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctccagctccagcgtcagctccgc 232 |||||||||||||| ||||||||| Sbjct: 515 ctccagctccagcggcagctccgc 538
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 acgcccacctcgtccccgccgcgc 314 |||||||||||||||||| ||||| Sbjct: 145775 acgcccacctcgtccccgtcgcgc 145752
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgcccgcaccgcgcgggcga 331 |||||||||||||||||||| Sbjct: 301260 cgcccgcaccgcgcgggcga 301279
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ccccgccgcgcccgcaccgc 323 |||||||||||||||||||| Sbjct: 66104 ccccgccgcgcccgcaccgc 66085
>ref|XM_756398.1| Ustilago maydis 521 hypothetical protein (UM05344.1) partial mRNA Length = 2430 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gtcgactcggccgccgccac 292 |||||||||||||||||||| Sbjct: 1964 gtcgactcggccgccgccac 1945
>ref|XM_387270.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07094.1) partial mRNA Length = 2067 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 aaacctcagagatctcatct 47 |||||||||||||||||||| Sbjct: 1696 aaacctcagagatctcatct 1677
>emb|CT009574.5| Mouse DNA sequence from clone RP23-140H11 on chromosome 17, complete sequence Length = 204822 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aaaaccaaaacctcagagat 40 |||||||||||||||||||| Sbjct: 174779 aaaaccaaaacctcagagat 174760
>gb|AC145343.3| Homo sapiens chromosome 17, clone XXfos-8207C6, complete sequence Length = 40272 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctccagctccagcgtcagctccgc 232 |||||||||||||| ||||||||| Sbjct: 18147 ctccagctccagcggcagctccgc 18170
>emb|Z82200.1|HS333E23 Human DNA sequence from clone RP3-333E23 on chromosome Xq21.1 Contains the P2RY10 gene for purinergic receptor P2Y G-protein coupled 10, complete sequence Length = 128011 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tccagctccagcgtcagctc 229 |||||||||||||||||||| Sbjct: 4928 tccagctccagcgtcagctc 4947
>emb|AL512286.6| Human DNA sequence from clone RP11-45J1 on chromosome X Contains a prefoldin 4 (PFDN4) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 91875 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cattagaaaaaccaaaacct 33 |||||||||||||||||||| Sbjct: 33525 cattagaaaaaccaaaacct 33506
>gb|AE008696.1| Salmonella typhimurium LT2, section 4 of 220 of the complete genome Length = 22039 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgccgcgcccgcaccgcgcg 326 |||||||||||||||||||| Sbjct: 3303 cgccgcgcccgcaccgcgcg 3284
>gb|BC033935.1| Homo sapiens F-box protein 36, mRNA (cDNA clone MGC:41928 IMAGE:5296808), complete cds Length = 924 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctccagctccagcgtcagctccgc 232 |||||||||||||| ||||||||| Sbjct: 515 ctccagctccagcggcagctccgc 538
>gb|BC022538.1| Homo sapiens F-box protein 36, mRNA (cDNA clone MGC:26691 IMAGE:4817261), complete cds Length = 2971 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctccagctccagcgtcagctccgc 232 |||||||||||||| ||||||||| Sbjct: 638 ctccagctccagcggcagctccgc 661
>emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 14/20 Length = 258050 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgccgcgcccgcaccgcgcg 326 |||||||||||||||||||| Sbjct: 169546 cgccgcgcccgcaccgcgcg 169527
>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 1/20 Length = 251050 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgccgcgcccgcaccgcgcg 326 |||||||||||||||||||| Sbjct: 66749 cgccgcgcccgcaccgcgcg 66730
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccgccgcgcccgcaccgcgc 325 |||||||||||||||||||| Sbjct: 129189 ccgccgcgcccgcaccgcgc 129208
>gb|AY128438.1| Drosophila melanogaster LD09950 full insert cDNA Length = 1894 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccaactccagctccagcgtc 224 |||||||||||||||||||| Sbjct: 1332 ccaactccagctccagcgtc 1351
>gb|AC010688.6| Drosophila melanogaster 3L BAC RP98-11G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 201313 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccaactccagctccagcgtc 224 |||||||||||||||||||| Sbjct: 26202 ccaactccagctccagcgtc 26183
>dbj|AK123085.1| Homo sapiens cDNA FLJ41090 fis, clone ASTRO2003960 Length = 2281 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctccagctccagcgtcagctccgc 232 |||||||||||||| ||||||||| Sbjct: 827 ctccagctccagcggcagctccgc 850
>emb|CR593898.1| full-length cDNA clone CS0DJ015YN03 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 916 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctccagctccagcgtcagctccgc 232 |||||||||||||| ||||||||| Sbjct: 521 ctccagctccagcggcagctccgc 544
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gccgccgccacgcccacctc 301 |||||||||||||||||||| Sbjct: 68613 gccgccgccacgcccacctc 68632
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccgccgcgcccgcaccgcgc 325 |||||||||||||||||||| Sbjct: 103191 ccgccgcgcccgcaccgcgc 103172
>ref|NM_079393.2| Drosophila melanogaster Mo25 CG4083-RA (Mo25), mRNA Length = 2255 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccaactccagctccagcgtc 224 |||||||||||||||||||| Sbjct: 1355 ccaactccagctccagcgtc 1374
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gccgcgcccgcaccgcgcgg 327 |||||||||||||||||||| Sbjct: 4191456 gccgcgcccgcaccgcgcgg 4191437
>emb|CR385700.1| Gallus gallus finished cDNA, clone ChEST574a17 Length = 582 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tggcgccgctcggcccgcgg 380 |||||||||||||||||||| Sbjct: 30 tggcgccgctcggcccgcgg 11
>emb|BX934121.2| Gallus gallus finished cDNA, clone ChEST115p1 Length = 1760 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 gtgccgccctggcgccgctcggcc 375 |||||||||||||||||| ||||| Sbjct: 101 gtgccgccctggcgccgcgcggcc 124
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgcgcgggcgacgtggcgtg 340 |||||||||||||||||||| Sbjct: 19654739 cgcgcgggcgacgtggcgtg 19654720
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggct 251 |||||||||||||||||||| Sbjct: 11443936 cgagcagcagcagcacggct 11443955
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 gccgccgccacgcccacctcgtcc 305 |||||||||||| ||||||||||| Sbjct: 24720530 gccgccgccacggccacctcgtcc 24720553
>emb|BX950344.1| Gallus gallus finished cDNA, clone ChEST171j17 Length = 703 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 gtgccgccctggcgccgctcggcc 375 |||||||||||||||||| ||||| Sbjct: 96 gtgccgccctggcgccgcgcggcc 119
>dbj|AB093208.1| Zea mays ache mRNA for hypothetical protein, complete cds Length = 1471 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gagcagcagcagcacggctg 252 |||||||||||||||||||| Sbjct: 142 gagcagcagcagcacggctg 123
>dbj|AB158460.1| Streptomyces halstedii hlsA, hlsB, hlsC genes for type I polyketide synthase, type I polyketide synthase, type I polyketide synthase, complete and partial cds Length = 45102 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ctcgtccccgccgcgcccgc 318 |||||||||||||||||||| Sbjct: 17216 ctcgtccccgccgcgcccgc 17235
>gb|AC009973.10| Homo sapiens BAC clone RP11-457P23 from 2, complete sequence Length = 202383 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctccagctccagcgtcagctccgc 232 |||||||||||||| ||||||||| Sbjct: 196821 ctccagctccagcggcagctccgc 196844
>gb|AC151273.2| Mus musculus BAC clone RP24-237J7 from chromosome 17, complete sequence Length = 143288 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aaaaccaaaacctcagagat 40 |||||||||||||||||||| Sbjct: 9457 aaaaccaaaacctcagagat 9476
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cccgccgcgcccgcaccgcg 324 |||||||||||||||||||| Sbjct: 5949581 cccgccgcgcccgcaccgcg 5949562
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggct 251 |||||||||||||||||||| Sbjct: 7594 cgagcagcagcagcacggct 7613
>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446G09 Length = 146898 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgagcagcagcagcacggct 251 |||||||||||||||||||| Sbjct: 53456 cgagcagcagcagcacggct 53475
>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1372_D06 Length = 129242 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 gccgccgccacgcccacctcgtcc 305 |||||||||||| ||||||||||| Sbjct: 101928 gccgccgccacggccacctcgtcc 101951
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1234_B11 Length = 128095 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 gccgccgccacgcccacctcgtcc 305 |||||||||||| ||||||||||| Sbjct: 20178 gccgccgccacggccacctcgtcc 20201
>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0042B03 Length = 167669 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgcgcgggcgacgtggcgtg 340 |||||||||||||||||||| Sbjct: 130299 cgcgcgggcgacgtggcgtg 130280
>gb|AF002158.1|GFAF002158 Gomphus floccosus cytochrome oxidase subunit 3 (cox3) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 640 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aacctccattagaaaaacca 27 |||||||||||||||||||| Sbjct: 52 aacctccattagaaaaacca 33
>dbj|AK105237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A03, full insert sequence Length = 2052 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 acgcccacctcgtccccgccgcgc 314 |||||||||||||||||| ||||| Sbjct: 1455 acgcccacctcgtccccgtcgcgc 1432
>dbj|AK104976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H07, full insert sequence Length = 2293 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccgccgcgcccgcaccgcgc 325 |||||||||||||||||||| Sbjct: 254 ccgccgcgcccgcaccgcgc 273
>dbj|AK069060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005G23, full insert sequence Length = 2323 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccgccgcgcccgcaccgcgc 325 |||||||||||||||||||| Sbjct: 283 ccgccgcgcccgcaccgcgc 302
>gb|AY107095.1| Zea mays PCO131316 mRNA sequence Length = 1042 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gagcagcagcagcacggctg 252 |||||||||||||||||||| Sbjct: 149 gagcagcagcagcacggctg 130
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgccgcgcccgcaccgcgcg 326 |||||||||||||||||||| Sbjct: 3361040 cgccgcgcccgcaccgcgcg 3361021 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgccgcgcccgcaccgcgcg 326 |||||||||||||||||||| Sbjct: 66749 cgccgcgcccgcaccgcgcg 66730
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccaactccagctccagcgtc 224 |||||||||||||||||||| Sbjct: 30075 ccaactccagctccagcgtc 30056
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgccgcgcccgcaccgcgcg 326 |||||||||||||||||||| Sbjct: 3476677 cgccgcgcccgcaccgcgcg 3476658 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cgccgcgcccgcaccgcgcg 326 |||||||||||||||||||| Sbjct: 858654 cgccgcgcccgcaccgcgcg 858673
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 acgcccacctcgtccccgccgcgc 314 |||||||||||||||||| ||||| Sbjct: 48472 acgcccacctcgtccccgtcgcgc 48449
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cgcccgacgccgcgccggcg 203 |||||||||||||||||||| Sbjct: 985038 cgcccgacgccgcgccggcg 985019
>gb|AC091234.7| Oryza sativa chromosome 3 BAC OSJNBa0057E11 genomic sequence, complete sequence Length = 138716 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 gcgcgggcgacgtggcgtgggcgc 345 |||||||||||| ||||||||||| Sbjct: 87767 gcgcgggcgacgcggcgtgggcgc 87790
>dbj|AB000402.1| Drosophila melanogaster mRNA for DMO25, complete cds Length = 2213 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccaactccagctccagcgtc 224 |||||||||||||||||||| Sbjct: 1308 ccaactccagctccagcgtc 1327 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,030,470 Number of Sequences: 3902068 Number of extensions: 4030470 Number of successful extensions: 123646 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117907 Number of HSP's gapped (non-prelim): 5734 length of query: 384 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 362 effective length of database: 17,147,199,772 effective search space: 6207286317464 effective search space used: 6207286317464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
