ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet93a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ERBB2_RAT (P06494) Receptor tyrosine-protein kinase erbB-2 precu... 28 7.4

>ERBB2_RAT (P06494) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
            2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
            (Epidermal growth factor receptor-related protein)
          Length = 1257

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 75   SSDRPPGTGDAGHRKRRDGEERNG 4
            S D  PGTG   HR+ R    R+G
Sbjct: 1034 SPDPTPGTGSTAHRRHRSSSTRSG 1057


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,263,973
Number of Sequences: 219361
Number of extensions: 120228
Number of successful extensions: 571
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 80,573,946
effective HSP length: 2
effective length of database: 80,135,224
effective search space used: 1923245376
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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