>LYAM3_MOUSE (Q01102) P-selectin precursor (Granule membrane protein 140)|
           (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion
           molecule 3) (LECAM3) (CD62P antigen)
          Length = 768

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 24/80 (30%), Positives = 30/80 (37%)
 Frame = +3

Query: 96  PCRSSRSHCQSLET*PAGCMAKRNPVATTXXXXXXXASSEPWPAGGASSTARTRGMGSWA 275
           P +     CQSLE  P G MA  +P+A            +P      S+T    G G W 
Sbjct: 254 PPKCDAVQCQSLEAPPHGTMACMHPIAAFAYDSSCKFECQPGYRARGSNTLHCTGSGQW- 312

Query: 276 LWTRTSAPASSPTARWCRPP 335
                S P  +  A  C PP
Sbjct: 313 -----SEPLPTCEAIACEPP 327

>DIP2C_HUMAN (Q9Y2E4) Disco-interacting protein 2 homolog C|
          Length = 1556

 Score = 32.3 bits (72), Expect = 0.47
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = +1

Query: 1   TTPASQQSQTLLAGSGRQHIDREDPTN*HLARHVVPPDPTANRWRHSQQAAWPR 162
           TT  +  S T   GSG  H   +     H+  H  PPD T     HS Q   P+
Sbjct: 172 TTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSIQVERPQ 225

>Y4HP_RHISN (P50360) Hypothetical 61.7 kDa protein y4hP|
          Length = 552

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
 Frame = +2

Query: 119 LPIVGDIASRLHGQEKPRGDDTTPPAPARVLGTVASRWRELHGENSWDGLLGPL------ 280
           +P+   I + +   E+  GDDTT P  AR   T    W  +  +  + G   P       
Sbjct: 247 MPVFDLIEAHVFAAERLHGDDTTIPIQARDKCTTGRIWTYVCDDRPFGGTAPPAAIYYAS 306

Query: 281 ----DPHLRSSIISYGEMVQA-AYDGF 346
                 H +  +  YG ++Q+  Y+GF
Sbjct: 307 SDRRGEHPQKHLAGYGGILQSDCYNGF 333

>GAK_HUMAN (O14976) Cyclin G-associated kinase (EC 2.7.11.1)|
          Length = 1311

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 222  PAGGASSTARTRGMGSWALWTRTSAPASSPT 314
            P+   +S++    +G WA WT T+A A +PT
Sbjct: 1021 PSKMTASSSNPDLLGGWAAWTETAASAVAPT 1051

>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = +3

Query: 102 RSSRSHCQS-LET*PAGCMAKRNPVATTXXXXXXXASSEPWPAGGASSTARTRGMGSWAL 278
           RSS +HC+  L+  P G      PVA         +SS   PA  ++S A +  +GS   
Sbjct: 500 RSSFTHCRPPLDPEPPG--PPDPPVAFGKGYGSAPSSSASSPASSSASAATSFSLGSGTF 557

Query: 279 WTRTSAPASSPTARWCRPPTTG 344
             + S   S  TA   RPP  G
Sbjct: 558 KAQESGQGS--TAGPLRPPPPG 577

>MYCL1_MOUSE (P10166) L-myc-1 proto-oncogene protein|
          Length = 368

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +3

Query: 213 EPWPAGGASSTARTRGMGSWALWTRTSAPASSPTARW 323
           EPWP GGA   A +RG      W R  A        W
Sbjct: 62  EPWPGGGAGDEAESRGHSK--AWGRNYASIIRRDCMW 96

>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
            3.6.1.-)
          Length = 1072

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -1

Query: 358  PLGVEPVVGGLHHLAVGDDAGAEVRVQRAQEPIPRVL 248
            P G EP +GG   L++  ++  E+RV+ A E I RVL
Sbjct: 1013 PPGEEPALGGEPKLSLLIESNDEMRVRAAVEEIRRVL 1049

>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 551

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 52  QHIDREDPTN*HLARHVVPPDPTANRWRHSQQAAWPRETPWRRHD 186
           +H    D    HL+RHV P D   ++ R+   +    +   RRHD
Sbjct: 448 RHDSHRDHERHHLSRHVRPSDEGESKCRYEAHSHTRHDEHTRRHD 492

>GUAA_MYCPA (Q73U79) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 525

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
 Frame = +2

Query: 212 GTVASRWRELHGENSWDGLLGPLD---PHLRSSIISYGEMVQAAYDGFNTERRSPHCGAC 382
           GTVA      +G      L G L    P ++   +S+G+ V AA DGF     SP  GA 
Sbjct: 105 GTVAHTGTSEYGRTELKVLGGELHSGLPGVQPVWMSHGDAVTAAPDGFEVVASSP--GAV 162

Query: 383 FYAYED---LLAGV 415
             A+E+    LAGV
Sbjct: 163 VAAFENRARRLAGV 176

>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 348

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 32/113 (28%), Positives = 41/113 (36%), Gaps = 13/113 (11%)
 Frame = +3

Query: 36  RRQW*AAHRSRRSHELTPRAPCRSSR----SHCQSLET*PAGCMAKRNPVATTXXXXXXX 203
           RR     HR R S   T  +   SS     S   S  T  A    +  P           
Sbjct: 149 RRHRKPGHRRRTSTTSTSASSGSSSAGSTGSRWTSASTRGASTSPRATPPTWQRSTSMPP 208

Query: 204 ASSEPWP--------AGGAS-STARTRGMGSWALWTRTSAPASSPTARWCRPP 335
           + + PWP        AG AS +T RTR   SW+  +  SA  ++   R   PP
Sbjct: 209 SRASPWPRYGRRWRTAGTASRTTTRTRTGRSWSTGSIVSAAPTAMPRRSTSPP 261

>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC|
           6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS)
          Length = 650

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -3

Query: 158 GHAACWLCLQRLAVG--SGGTTWRARC 84
           GH  CW C+Q  AV   S  +T  ARC
Sbjct: 270 GHLFCWTCIQEHAVAATSSASTSSARC 296

>IGHE_MOUSE (P06336) Ig epsilon chain C region|
          Length = 421

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = +3

Query: 63  SRRSHELTPRAPCRSSRSHCQSLET*PAGCMAKR---NPVATTXXXXXXXASSEPWPAGG 233
           S R+ +L P  PC+ + S          GC+ K    NPV  T        S+  +PA G
Sbjct: 1   SIRNPQLYPLKPCKGTASMT-------LGCLVKDYFPNPVTVTWYSDSLNMSTVNFPALG 53

Query: 234 ASSTARTRGMGSW 272
           +     T  + SW
Sbjct: 54  SELKVTTSQVTSW 66

>YL585_MIMIV (Q5UP53) Hypothetical protein L585|
          Length = 107

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 252 FSPWSSRHLLATVPRTRAGAGGVVSSPRG 166
           + PW+ R LL      RAG+G V S+P G
Sbjct: 65  YRPWAGRSLLVAPAIYRAGSGPVGSTPWG 93

>E2F3_MOUSE (O35261) Transcription factor E2F3 (E2F-3)|
          Length = 457

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -2

Query: 228 LLATVPRTRAGAGGVVSSPRGFSWPCSLLAMSPTIGSGIGRNDMAREVLIRG 73
           LL +VP T   A  + ++P+G S    LL   P  G G G    A+  L  G
Sbjct: 80  LLPSVPGTEPAASSLYTTPQGPSSRVGLLQQPPAPGRGGGGGPPAKRRLELG 131

>CEP68_PONPY (Q5RCQ2) Centrosomal protein of 68 kDa (Cep68 protein)|
          Length = 751

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +3

Query: 207 SSEPWPAGGASSTARTRGMGSWALWTRTSAPASSPTARW-CRPP 335
           S + WP+G         G+ SW+  T T     S  ARW CR P
Sbjct: 368 SLKQWPSGVPQKQGGM-GLASWSQLTSTPRAPGSRDARWECREP 410

>OPGD1_RALSO (Q8XUX6) Glucans biosynthesis protein D 1 precursor|
          Length = 535

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 225 LATVPRTRAGAGGVVSSP-RGFSW 157
           LA V  TR G GG+V  P R FSW
Sbjct: 424 LARVVATRTGIGGIVGQPRRHFSW 447

>ARGD_SYNEL (P59322) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 412

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 346 EPVVGGLHHLAVGDDAGAEVRVQRAQEPIPRVLAVELAPPAGHG 215
           +P+V G  ++   D    E  V    +P P+V A+ L P  G G
Sbjct: 163 DPLVPGFAYVPYNDLGALEALVASLDQPQPQVAAILLEPLQGEG 206

>ARGD_ANASP (P54752) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 427

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 346 EPVVGGLHHLAVGDDAGAEVRVQRAQEPIPRVLAVELAPPAGHG 215
           +P+V G H++   D +  E  +    E   RV A+ + P  G G
Sbjct: 178 DPLVPGFHYVNYNDISAVEAAISELDEGDYRVAAILIEPLQGEG 221

>DYNA_CHICK (P35458) Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150)|
            (DAP-150) (p150-glued)
          Length = 1224

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +3

Query: 219  WPAGGASSTARTRGMGSWALWTRTSAPASSPTARWCRPP 335
            W   G+    RTR  G W   +R  A   SP A  C PP
Sbjct: 1186 WAMKGSIEALRTRPCGRWCSSSRARA---SPPASACSPP 1221

>DOCK4_MOUSE (P59764) Dedicator of cytokinesis protein 4|
          Length = 1978

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 12/65 (18%)
 Frame = +2

Query: 35   SPAVVGSTS--IEKIPRINTSRAMSF----------LPIPLPIVGDIASRLHGQEKPRGD 178
            SP + GS S  I  + R +TS    F          +P+P+P+   + S    +E  R +
Sbjct: 1849 SPVLSGSYSSGISSLSRCSTSETSGFENQANEQSVPVPVPVPVPVPVPSFSGSEEPVRKE 1908

Query: 179  DTTPP 193
              TPP
Sbjct: 1909 SKTPP 1913


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,553,920
Number of Sequences: 219361
Number of extensions: 1265428
Number of successful extensions: 4225
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4223
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)