ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet92g01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 589 bits (297), Expect = e-165 Identities = 326/335 (97%), Gaps = 3/335 (0%) Strand = Plus / Minus Query: 1 aacccaaagtcgcacactgcatctgcatctgcatgccacaccatctgtcccgtccctagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122579 aacccaaagtcgcacactgcatctgcatctgcatgccacaccatctgtcccgtccctagc 122520 Query: 61 catctacagctctctcccatgtgaaccagcgacgccagtccgccgctcattcaagggagc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122519 catctacagctctctcccatgtgaaccagcgacgccagtccgccgctcattcaagggagc 122460 Query: 121 aacaacctcgtgccgcggccggtagacagaggaggaggagatggtcagcgtggagaagca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122459 aacaacctcgtgccgcggccggtagacagaggaggaggagatggtcagcgtggagaagca 122400 Query: 181 gtcggcgccggcggcagcggcgtctgccgggaaggggctgacggtgggcggctgggcgca 240 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122399 gtcggcgccggcg---gcggcgcctgccgggaaggggctgacggtgggcggctgggcgca 122343 Query: 241 gcggcacctcaacctgtgcttcgtcgccggcttcctcctcgtgctcctcgcctacttcat 300 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 122342 acggcacctcaacctgtgcttcgtcgccggcttcctcctcgtgctcatcgcctacttcgt 122283 Query: 301 cgtctcccagcagttcgtcgtcgcctcccctgacg 335 ||||||||||||||||| |||||||||||| |||| Sbjct: 122282 cgtctcccagcagttcgccgtcgcctcccccgacg 122248 Score = 153 bits (77), Expect = 6e-34 Identities = 77/77 (100%) Strand = Plus / Minus Query: 335 gcagccgtctccgccatgacgccgcaccggaagaagcaccaggcgaccaagtcctccggt 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122101 gcagccgtctccgccatgacgccgcaccggaagaagcaccaggcgaccaagtcctccggt 122042 Query: 395 cgcgccggcgaagcagg 411 ||||||||||||||||| Sbjct: 122041 cgcgccggcgaagcagg 122025 Score = 113 bits (57), Expect = 5e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 209 gggaaggggctgacggtgggcggctgggcgcagcggcacctcaacctgtgcttcgtcgcc 268 ||||||||||||| |||| |||||||||||| || ||||||||||| | ||||||||| Sbjct: 147992 gggaaggggctgatggtgaagggctgggcgcagaggtacctcaacctggggttcgtcgcc 147933 Query: 269 ggcttcctcctcgtgctcctcgcctacttcatcgtctcccagcagttcg 317 || |||||||||||||| ||| ||||| || |||||||||||||||||| Sbjct: 147932 gggttcctcctcgtgctgctcacctacatcgtcgtctcccagcagttcg 147884 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 408 caggattaacgcaacggaatcgaggaggag 437 |||||||||||||||||||| ||||||||| Sbjct: 121814 caggattaacgcaacggaatggaggaggag 121785
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 561 bits (283), Expect = e-157 Identities = 323/335 (96%), Gaps = 6/335 (1%) Strand = Plus / Minus Query: 1 aacccaaagtcgcacactgcatctgcatctgcatgccacaccatctgtcccgtccctagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187258 aacccaaagtcgcacactgcatctgcatctgcatgccacaccatctgtcccgtccctagc 187199 Query: 61 catctacagctctctcccatgtgaaccagcgacgccagtccgccgctcattcaagggagc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187198 catctacagctctctcccatgtgaaccagcgacgccagtccgccgctcattcaagggagc 187139 Query: 121 aacaacctcgtgccgcggccggtagacagaggaggaggagatggtcagcgtggagaagca 180 || |||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 187138 aagaacctcgtgccgcggccggtagac---ggaggaggagatggtcagcgtggagaagca 187082 Query: 181 gtcggcgccggcggcagcggcgtctgccgggaaggggctgacggtgggcggctgggcgca 240 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 187081 gtcggcgccggcg---ccggcgtctgccgggaaggggctgacggtgggcgcctgggcgca 187025 Query: 241 gcggcacctcaacctgtgcttcgtcgccggcttcctcctcgtgctcctcgcctacttcat 300 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 187024 gcggcacctcaacctatgcttcgtcgccggcttcctcctcgtgctcctcgcctacttcgt 186965 Query: 301 cgtctcccagcagttcgtcgtcgcctcccctgacg 335 ||||||||||||||||| ||||||||||||||||| Sbjct: 186964 cgtctcccagcagttcgccgtcgcctcccctgacg 186930 Score = 153 bits (77), Expect = 6e-34 Identities = 77/77 (100%) Strand = Plus / Minus Query: 335 gcagccgtctccgccatgacgccgcaccggaagaagcaccaggcgaccaagtcctccggt 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186783 gcagccgtctccgccatgacgccgcaccggaagaagcaccaggcgaccaagtcctccggt 186724 Query: 395 cgcgccggcgaagcagg 411 ||||||||||||||||| Sbjct: 186723 cgcgccggcgaagcagg 186707 Score = 99.6 bits (50), Expect = 7e-18 Identities = 92/106 (86%) Strand = Plus / Minus Query: 212 aaggggctgacggtgggcggctgggcgcagcggcacctcaacctgtgcttcgtcgccggc 271 |||||||||| |||| |||||||||||| || ||||||||||| | ||||||||||| Sbjct: 196886 aaggggctgatggtgaagggctgggcgcagaggtacctcaacctggggttcgtcgccggg 196827 Query: 272 ttcctcctcgtgctcctcgcctacttcatcgtctcccagcagttcg 317 |||||||||||||| ||| | ||| || |||||||||||||||||| Sbjct: 196826 ttcctcctcgtgctgctcacatacatcgtcgtctcccagcagttcg 196781 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 408 caggattaacgcaacggaatcgaggaggag 437 |||||||||||||||||||||||||||||| Sbjct: 186513 caggattaacgcaacggaatcgaggaggag 186484
>emb|AJ867398.1| Triticum aestivum mRNA for glycosyltransferase (a3a gene) Length = 1969 Score = 127 bits (64), Expect = 3e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 231 gctgggcgcagcggcacctcaacctgtgcttcgtcgccggcttcctcctcgtgctcctcg 290 ||||||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 213 gctgggcgcagaggtacctcaacctgggcttcgtcgccggcttcctgctcgtgctcctcg 272 Query: 291 cctacttcatcgtctcccagcagttcgtcgtcgcctcccc 330 ||||| || ||||| |||||||||||||| || ||||||| Sbjct: 273 cctacatcgtcgtcacccagcagttcgtcatcacctcccc 312
>ref|NM_184127.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1690 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 258 gcttcgtcgccggcttcctcctcgtgctcctcgcctacttcatcgtctcccagcagttcg 317 ||||| ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||| Sbjct: 88 gcttcttcgccggcttcctcctcgtcctcctcacctacgtcatcgtctcgcagcagttcg 147
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 258 gcttcgtcgccggcttcctcctcgtgctcctcgcctacttcatcgtctcccagcagttcg 317 ||||| ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||| Sbjct: 1080409 gcttcttcgccggcttcctcctcgtcctcctcacctacgtcatcgtctcgcagcagttcg 1080350 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gtcggcgccggcggcagcggc 201 ||||||||||||||||||||| Sbjct: 15478040 gtcggcgccggcggcagcggc 15478020 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 tcgcacactgcatctgcatc 29 |||||||||||||||||||| Sbjct: 43053265 tcgcacactgcatctgcatc 43053246
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 258 gcttcgtcgccggcttcctcctcgtgctcctcgcctacttcatcgtctcccagcagttcg 317 ||||| ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||| Sbjct: 118077 gcttcttcgccggcttcctcctcgtcctcctcacctacgtcatcgtctcgcagcagttcg 118018
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 258 gcttcgtcgccggcttcctcctcgtgctcctcgcctacttcatcgtctcccagcagttcg 317 ||||| ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||| Sbjct: 49723 gcttcttcgccggcttcctcctcgtcctcctcacctacgtcatcgtctcgcagcagttcg 49664
>dbj|AK105948.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C08, full insert sequence Length = 1791 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 258 gcttcgtcgccggcttcctcctcgtgctcctcgcctacttcatcgtctcccagcagttcg 317 ||||| ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||| Sbjct: 189 gcttcttcgccggcttcctcctcgtcctcctcacctacgtcatcgtctcgcagcagttcg 248
>dbj|AK071050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075J12, full insert sequence Length = 1688 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 258 gcttcgtcgccggcttcctcctcgtgctcctcgcctacttcatcgtctcccagcagttcg 317 ||||| ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||| Sbjct: 87 gcttcttcgccggcttcctcctcgtcctcctcacctacgtcatcgtctcgcagcagttcg 146
>emb|AJ867400.1| Sorghum bicolor mRNA for glycosyltransferase (a3 gene) Length = 2019 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 231 gctgggcgcagcggcacctcaacctgtgcttcgtcgccggcttcctcctcgtgctcctcg 290 ||||||||||||| ||||||||| | |||||| || |||||||||||||||||| ||| Sbjct: 311 gctgggcgcagcgccacctcaacgtcggcttcgccgtcggcttcctcctcgtgctgctca 370 Query: 291 cctacttcatcgtctcc 307 ||||| || |||||||| Sbjct: 371 cctacctcgtcgtctcc 387
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 181 gtcggcgccggcggcagcggcgt 203 ||||||||||||||||||||||| Sbjct: 6313504 gtcggcgccggcggcagcggcgt 6313482
>ref|XM_598625.2| PREDICTED: Bos taurus similar to calmodulin regulated spectrin-associated protein 1-like 1 (LOC520385), mRNA Length = 4269 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 ggagatggtcagcgtggagaag 178 |||||||||||||||||||||| Sbjct: 327 ggagatggtcagcgtggagaag 348
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 gtcggcgccggcggcagcggcg 202 |||||||||||||||||||||| Sbjct: 166313 gtcggcgccggcggcagcggcg 166334
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 179 cagtcggcgccggcggcagcggcgtc 204 |||||||| ||||||||||||||||| Sbjct: 194486 cagtcggccccggcggcagcggcgtc 194511
>ref|XM_464126.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3581 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 gaggaggaggagatggtcagcgtgg 173 |||||||||||||||| |||||||| Sbjct: 179 gaggaggaggagatgggcagcgtgg 203
>ref|NM_193872.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1503 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gtcggcgccggcggcagcggc 201 ||||||||||||||||||||| Sbjct: 87 gtcggcgccggcggcagcggc 67
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcgt 203 ||||||||||||||||||||| Sbjct: 7490161 cggcgccggcggcagcggcgt 7490181
>emb|AL138959.20| Human DNA sequence from clone RP11-214O11 on chromosome 13 Contains a nucleosome assembly protein 1-like 1 (NAP1L1) pseudogene and a ribosomal protein L27a (RPL27A) pseudogene, complete sequence Length = 168790 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 cagaggaggaggagatggtca 167 ||||||||||||||||||||| Sbjct: 33168 cagaggaggaggagatggtca 33188
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gtggagaagcagtcggcgccggcgg 194 ||||||||| ||||||||||||||| Sbjct: 129027 gtggagaaggagtcggcgccggcgg 129003
>emb|AJ316244.1|SPA316244 Salmon pancreas disease virus complete genome, isolate F93125, genomic RNA Length = 11919 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 cgtcgccggcttcctcctcgt 282 ||||||||||||||||||||| Sbjct: 1675 cgtcgccggcttcctcctcgt 1655
>gb|AF494098.1| Canis familiaris periplakin mRNA, partial cds Length = 2892 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 ggcttcctcctcgtgctcctc 289 ||||||||||||||||||||| Sbjct: 81 ggcttcctcctcgtgctcctc 61
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cactgcatctgcatctgcatg 35 ||||||||||||||||||||| Sbjct: 28108794 cactgcatctgcatctgcatg 28108814 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 322 cgcctcccctgacgcagccgtctccgcc 349 |||||||||| |||| |||||||||||| Sbjct: 13476915 cgcctcccctcacgccgccgtctccgcc 13476888
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcgt 203 ||||||||||||||||||||| Sbjct: 7487996 cggcgccggcggcagcggcgt 7488016
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctgcatctgcatctgcatgcc 37 ||||||||||||||||||||| Sbjct: 10183760 ctgcatctgcatctgcatgcc 10183780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 gaggaggaggagatggtcagcgtgg 173 |||||||||||||||| |||||||| Sbjct: 2397636 gaggaggaggagatgggcagcgtgg 2397660
>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0042A11, complete sequence Length = 113049 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcgt 203 ||||||||||||||||||||| Sbjct: 19057 cggcgccggcggcagcggcgt 19077
>dbj|AP007251.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone:OSJNOa234E14 Length = 34070 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 cgtcgccggcttcctcctcgtgctc 286 |||||||||| |||||||||||||| Sbjct: 33787 cgtcgccggcgtcctcctcgtgctc 33811
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gtcggcgccggcggcagcggc 201 ||||||||||||||||||||| Sbjct: 35549 gtcggcgccggcggcagcggc 35529
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cactgcatctgcatctgcatg 35 ||||||||||||||||||||| Sbjct: 92090 cactgcatctgcatctgcatg 92110
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctgcatctgcatctgcatgcc 37 ||||||||||||||||||||| Sbjct: 56126 ctgcatctgcatctgcatgcc 56146
>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017G06 Length = 150628 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctgcatctgcatctgcatgcc 37 ||||||||||||||||||||| Sbjct: 131454 ctgcatctgcatctgcatgcc 131474
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 gaggaggaggagatggtcagcgtgg 173 |||||||||||||||| |||||||| Sbjct: 13557 gaggaggaggagatgggcagcgtgg 13581
>dbj|AK070600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055D09, full insert sequence Length = 3582 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 gaggaggaggagatggtcagcgtgg 173 |||||||||||||||| |||||||| Sbjct: 179 gaggaggaggagatgggcagcgtgg 203
>dbj|AK069304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010M20, full insert sequence Length = 1003 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcgt 203 ||||||||||||||||||||| Sbjct: 262 cggcgccggcggcagcggcgt 282
>dbj|AK065146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A22, full insert sequence Length = 1726 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcgt 203 ||||||||||||||||||||| Sbjct: 916 cggcgccggcggcagcggcgt 896
>ref|XM_474474.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cactgcatctgcatctgcat 34 |||||||||||||||||||| Sbjct: 21 cactgcatctgcatctgcat 40
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 3133002 cggcgccggcggcagcggcg 3133021
>gb|BC085510.1| Mus musculus frequently rearranged in advanced T-cell lymphomas 2, mRNA (cDNA clone MGC:102239 IMAGE:5718518), complete cds Length = 2152 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 238 tcgtcgccggcttcctcctc 219
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cactgcatctgcatctgcat 34 |||||||||||||||||||| Sbjct: 475724 cactgcatctgcatctgcat 475743
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 3730469 cggcgccggcggcagcggcg 3730450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 3049839 cggcgccggcggcagcggcg 3049858 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 338188 cggcgccggcggcagcggcg 338169 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 337021 cggcgccggcggcagcggcg 337002
>gb|AC150551.1| Drosophila melanogaster clone BACR16A12, complete sequence Length = 185417 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcatctgcatgccacaccat 44 |||||||||||||||||||| Sbjct: 98032 gcatctgcatgccacaccat 98013
>gb|BC034214.1| Mus musculus frequently rearranged in advanced T-cell lymphomas 2, mRNA (cDNA clone MGC:37615 IMAGE:4989784), complete cds Length = 2164 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 225 tcgtcgccggcttcctcctc 206
>gb|AY518895.1| Mus musculus FRAT2 (Frat2) gene, complete cds Length = 3447 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 429 tcgtcgccggcttcctcctc 410
>gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosome 19, complete sequence Length = 226099 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 75610 tcgtcgccggcttcctcctc 75629 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 57947 tcgtcgccggcttcctcctc 57928
>ref|XM_656779.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4267.2), mRNA Length = 2817 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cactgcatctgcatctgcat 34 |||||||||||||||||||| Sbjct: 2147 cactgcatctgcatctgcat 2128
>ref|NM_177603.1| Mus musculus frequently rearranged in advanced T-cell lymphomas 2 (Frat2), mRNA Length = 2156 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 265 tcgtcgccggcttcctcctc 246
>ref|NM_144612.4| Homo sapiens lipoxygenase homology domains 1 (LOXHD1), mRNA Length = 4775 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gacagaggaggaggagatgg 164 |||||||||||||||||||| Sbjct: 2205 gacagaggaggaggagatgg 2224
>gb|AC137967.14| Mus musculus chromosome 10, clone RP24-323I24, complete sequence Length = 199669 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctgcatgccacaccatctgt 48 |||||||||||||||||||| Sbjct: 11391 ctgcatgccacaccatctgt 11372
>gb|AC124721.4| Mus musculus chromosome 10 clone RP23-387G19, complete sequence Length = 216612 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctgcatgccacaccatctgt 48 |||||||||||||||||||| Sbjct: 81623 ctgcatgccacaccatctgt 81642
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctcctcgcctacttcatcg 302 |||||||||||||||||||| Sbjct: 2072353 gctcctcgcctacttcatcg 2072372
>gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosome 19, complete sequence Length = 173527 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 20632 tcgtcgccggcttcctcctc 20651 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 2969 tcgtcgccggcttcctcctc 2950
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 131956 cggcgccggcggcagcggcg 131975 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 106262 cggcgccggcggcagcggcg 106243
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 194167 cggcgccggcggcagcggcg 194186
>ref|XM_381339.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01163.1) partial mRNA Length = 1242 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 actgcatctgcatctgcatg 35 |||||||||||||||||||| Sbjct: 670 actgcatctgcatctgcatg 651
>ref|XM_572409.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH02340) partial mRNA Length = 2430 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cactgcatctgcatctgcat 34 |||||||||||||||||||| Sbjct: 2094 cactgcatctgcatctgcat 2113
>emb|BX936293.11| Platypus DNA sequence from clone XX-516O5, complete sequence Length = 178175 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cttcctcctcgtgctcctcg 290 |||||||||||||||||||| Sbjct: 16130 cttcctcctcgtgctcctcg 16149
>gb|U58974.2|MMU58974 Mus musculus proto-oncogene Frat1 (Frat1) mRNA, complete cds Length = 2464 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 93 tcgtcgccggcttcctcctc 74
>emb|AL360001.33| Human DNA sequence from clone RP11-332O19 on chromosome 10 Contains the 5' end of the NT5C2 gene for cytosolic 5'-nucleotidase II, a ribosomal protrein S15A (RPS15A) pseudogene, a MARCKS-like protein (MLP) pseudogene, a suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) (ST13) pseudogene, a ribulose-5-phosphate-3-epimerase (RPE) pseudogene and two CpG islands, complete sequence Length = 142893 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cacactgcatctgcatctgc 32 |||||||||||||||||||| Sbjct: 4591 cacactgcatctgcatctgc 4572
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 acctgtgcttcgtcgccggc 271 |||||||||||||||||||| Sbjct: 4859826 acctgtgcttcgtcgccggc 4859807
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 270482 cggcgccggcggcagcggcg 270463
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 282080 cggcgccggcggcagcggcg 282099
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 338126 cggcgccggcggcagcggcg 338107 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 336926 cggcgccggcggcagcggcg 336907
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 339137 cggcgccggcggcagcggcg 339118 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 337946 cggcgccggcggcagcggcg 337927
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 248840 cggcgccggcggcagcggcg 248821
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cactgcatctgcatctgcat 34 |||||||||||||||||||| Sbjct: 53362 cactgcatctgcatctgcat 53343
>emb|AL645909.11| Mouse DNA sequence from clone RP23-216O18 on chromosome 11 Contains the Lcp2 gene for lymphocyte cytosolic protein 2, the 5' end of a novel gene and a novel gene, complete sequence Length = 186087 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cactgcatctgcatctgcat 34 |||||||||||||||||||| Sbjct: 46153 cactgcatctgcatctgcat 46172
>dbj|AK127869.1| Homo sapiens cDNA FLJ45972 fis, clone PLACE7018304 Length = 4775 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gacagaggaggaggagatgg 164 |||||||||||||||||||| Sbjct: 2205 gacagaggaggaggagatgg 2224
>dbj|AK127670.1| Homo sapiens cDNA FLJ45768 fis, clone NETRP2000961, highly similar to Cytosolic purine 5'-nucleotidase (EC 3.1.3.5) Length = 2625 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cacactgcatctgcatctgc 32 |||||||||||||||||||| Sbjct: 148 cacactgcatctgcatctgc 167
>gb|AC005396.3| Arabidopsis thaliana chromosome 2 clone T26I20 map mi398, complete sequence Length = 85214 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggagaagcagtcggcgccgg 191 |||||||||||||||||||| Sbjct: 13291 ggagaagcagtcggcgccgg 13272
>gb|AC115482.2| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone BACR04A24, complete sequence Length = 166677 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcatctgcatgccacaccat 44 |||||||||||||||||||| Sbjct: 103462 gcatctgcatgccacaccat 103443
>gb|AF014950.1| Stenotrophomonas maltophilia chitinase A (chiA) gene, complete cds Length = 2810 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ggctgacggtgggcggctgg 235 |||||||||||||||||||| Sbjct: 627 ggctgacggtgggcggctgg 608
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete sequence Length = 132097 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cactgcatctgcatctgcat 34 |||||||||||||||||||| Sbjct: 72939 cactgcatctgcatctgcat 72958
>gb|S76843.1| orf 3' of PGRS tandem repeat {polymorphic GC-rich repetitive sequence} [Mycobacterium tuberculosis, H37Rv, Genomic, 1450 nt] Length = 1450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 537 cggcgccggcggcagcggcg 556
>dbj|AK081171.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930095M03 product:similar to FRAT2 [Homo sapiens], full insert sequence Length = 2156 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 265 tcgtcgccggcttcctcctc 246
>dbj|AK015680.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930502J22 product:frequently rearranged in advanced T-cell lymphomas, full insert sequence Length = 1186 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 172 tcgtcgccggcttcctcctc 153
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cactgcatctgcatctgcat 34 |||||||||||||||||||| Sbjct: 35428559 cactgcatctgcatctgcat 35428540
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ggcgccggcggcagcggcgtctgc 207 |||| ||||||||||||||||||| Sbjct: 17335458 ggcggcggcggcagcggcgtctgc 17335435
>emb|BX821626.1|CNS0AA3L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL59ZH01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggagaagcagtcggcgccgg 191 |||||||||||||||||||| Sbjct: 524 ggagaagcagtcggcgccgg 505
>emb|BX819828.1|CNS0A8IK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS33ZA04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 745 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggagaagcagtcggcgccgg 191 |||||||||||||||||||| Sbjct: 569 ggagaagcagtcggcgccgg 550
>gb|AC153817.6| Mus musculus BAC RP23-11P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 247508 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 acagaggaggaggagatggt 165 |||||||||||||||||||| Sbjct: 146347 acagaggaggaggagatggt 146366
>gb|AC102491.19| Mus musculus chromosome 1, clone RP24-529L13, complete sequence Length = 190728 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gacagaggaggaggagatgg 164 |||||||||||||||||||| Sbjct: 89555 gacagaggaggaggagatgg 89536
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 tcgcacactgcatctgcatc 29 |||||||||||||||||||| Sbjct: 50294 tcgcacactgcatctgcatc 50275
>gb|AE004669.1| Pseudomonas aeruginosa PAO1, section 230 of 529 of the complete genome Length = 22444 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ccagcagttcgtcgtcgcct 326 |||||||||||||||||||| Sbjct: 20617 ccagcagttcgtcgtcgcct 20636
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 agtcggcgccggcggcagcg 199 |||||||||||||||||||| Sbjct: 6312148 agtcggcgccggcggcagcg 6312167
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ggcgccggcggcagcggcgtctgc 207 |||| ||||||||||||||||||| Sbjct: 122330 ggcggcggcggcagcggcgtctgc 122307
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ggcgccggcggcagcggcgtctgc 207 |||| ||||||||||||||||||| Sbjct: 59371 ggcggcggcggcagcggcgtctgc 59348
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 322 cgcctcccctgacgcagccgtctccgcc 349 |||||||||| |||| |||||||||||| Sbjct: 56598 cgcctcccctcacgccgccgtctccgcc 56571
>emb|BX648078.1|HSM808224 Homo sapiens mRNA; cDNA DKFZp686H0227 (from clone DKFZp686H0227) Length = 7308 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cacactgcatctgcatctgc 32 |||||||||||||||||||| Sbjct: 353 cacactgcatctgcatctgc 372
>dbj|AK118194.1| Arabidopsis thaliana mRNA, clone: RAFL19-51-K06 Length = 808 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggagaagcagtcggcgccgg 191 |||||||||||||||||||| Sbjct: 582 ggagaagcagtcggcgccgg 563
>dbj|AK068103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129K12, full insert sequence Length = 2482 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 322 cgcctcccctgacgcagccgtctccgcc 349 |||||||||| |||| |||||||||||| Sbjct: 177 cgcctcccctcacgccgccgtctccgcc 204
>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase, aminoalcoholphosphotransferase, putative growth-regulating factor 1, putative GAG-POL precursor, putative GAG-POL precursor, putative RIRE2 orf3, putative anthocyanin regulatory C1, putative protein T30F21.6, putative copia polyprotein, putative copia polyprotein, putative protein NP_196765.1, and gb protein genes, complete cds; and putative zinc finger protein gene, partial cds Length = 144159 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctgcatctgcatctgcatgc 36 |||||||||||||||||||| Sbjct: 42271 ctgcatctgcatctgcatgc 42252
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcatctgcatgccacaccat 44 |||||||||||||||||||| Sbjct: 131625 gcatctgcatgccacaccat 131606
>gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s DS00679 (D272) and DS05054 (D135)), complete sequence Length = 81053 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcatctgcatgccacaccat 44 |||||||||||||||||||| Sbjct: 76851 gcatctgcatgccacaccat 76832
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcttcgtcgccggcttcctc 277 |||||||||||||||||||| Sbjct: 266442 gcttcgtcgccggcttcctc 266423
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tcctcctcgtgctcctcgcc 292 |||||||||||||||||||| Sbjct: 2992466 tcctcctcgtgctcctcgcc 2992485
>emb|AL844852.11| Mouse DNA sequence from clone RP23-260N23 on chromosome 2, complete sequence Length = 257676 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cagaggaggaggagatggtc 166 |||||||||||||||||||| Sbjct: 61311 cagaggaggaggagatggtc 61330
>gb|AC005269.1|AC005269 Drosophila melanogaster DNA sequence (P1s DS00764 (D273) and DS00501 (D274)), complete sequence Length = 104278 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcatctgcatgccacaccat 44 |||||||||||||||||||| Sbjct: 994 gcatctgcatgccacaccat 975
>emb|CT025532.15| Mouse DNA sequence from clone RP23-231K10 on chromosome 9, complete sequence Length = 196153 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 agacagaggaggaggagatg 163 |||||||||||||||||||| Sbjct: 27326 agacagaggaggaggagatg 27345
>ref|NM_008043.2| Mus musculus frequently rearranged in advanced T-cell lymphomas (Frat1), mRNA Length = 2464 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcgtcgccggcttcctcctc 280 |||||||||||||||||||| Sbjct: 93 tcgtcgccggcttcctcctc 74
>gb|AD000002.1|MSGY154 Mycobacterium tuberculosis sequence from clone y154 Length = 40221 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 10300 cggcgccggcggcagcggcg 10281
>gb|L15192.1|MSGREPEATS Mycobacterium tuberculosis DNA fragment with chi-like repeats Length = 958 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 611 cggcgccggcggcagcggcg 630
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control protein (BICP4) gene, complete cds Length = 8113 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 4769 cggcgccggcggcagcggcg 4788
>gb|L14321.1|HSBBICP4B Bovine herpesvirus type 1 immedidate-early transcriptional control protein (BICP4) gene, 5' end Length = 2764 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcggcagcggcg 202 |||||||||||||||||||| Sbjct: 2017 cggcgccggcggcagcggcg 2036 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,854,787 Number of Sequences: 3902068 Number of extensions: 3854787 Number of successful extensions: 98222 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95954 Number of HSP's gapped (non-prelim): 2265 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
