ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet92e11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 488 bits (246), Expect = e-135 Identities = 312/334 (93%) Strand = Plus / Plus Query: 117 gcatggctcgcatggcggtgtcggtgctggcgatcctgctcgcctggtgcgccctggcgg 176 ||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||| Sbjct: 47 gcatggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcgg 106 Query: 177 cggcgaggttcgacaaggagttcgacatcacctggggcgacgggcgtggcaagatcctga 236 ||||||| |||||||||||||||||| | |||||||| |||||||| ||||||||||| | Sbjct: 107 cggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcctca 166 Query: 237 acaatggtcagctcctgacgctggcgctggacaaggtgtccggctccgggttccagtcca 296 |||| || |||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 167 acaacggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtcca 226 Query: 297 agcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctg 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 agcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctg 286 Query: 357 ccggcaccgtcaccgcatactacctgtcgtcgcaggggccgacgcacgacgagatcgact 416 |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 287 ccggcaccgtaaccgcctactacctgtcgtcgcagggtccgacgcacgacgagatcgact 346 Query: 417 tcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||||||| ||||||||||||||||||| Sbjct: 347 tcgagttcctgggaaacgtcaccggcgagcccta 380
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 359 bits (181), Expect = 5e-96 Identities = 303/339 (89%), Gaps = 6/339 (1%) Strand = Plus / Plus Query: 118 catggctcgcatggcggtgtcggtgctggcgatcctgctcgcctggtgcgccct---ggc 174 ||||||||||||||||||||||||||||||||||||||| || | || ||| | ||| Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182 Query: 175 ggcggcgaggttcgacaaggagttcgacatcacctggggcgacgggcgtggcaagatcct 234 ||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacggccgtggaaagatcct 242 Query: 235 gaacaatggtcagctcctgacgctggcgctggacaaggtgtccggctccgggttccagtc 294 |||||||| ||||||||||| |||| |||||||||| ||||| |||||||||||||| Sbjct: 243 caacaatgggcagctcctgaccctggggctggacaagacctccgggtccgggttccagtc 302 Query: 295 caagcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtc-cccggcaac- 352 ||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||| Sbjct: 303 caagcgcgagtacctcttcggcaagatcgacatgcaactcaagctcgtcgccgggcaact 362 Query: 353 tctgccggcaccgtcaccgcatactacctgtcg-tcgcaggggccgacgcacgacgagat 411 || ||||||||||||||||| |||||||||||| ||| |||| ||||||||||| |||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgttcgatgggggcgacgcacgacaagat 422 Query: 412 cgacttcgagttcctggggcacgtcaccggcgagcccta 450 |||||||||||||||||| ||||||| ||||||||||| Sbjct: 423 cgacttcgagttcctgggcaacgtcacgggcgagcccta 461
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 317 bits (160), Expect = 2e-83 Identities = 232/256 (90%) Strand = Plus / Plus Query: 192 aggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcc 251 ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||| | Sbjct: 196 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 255 Query: 252 tgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctct 311 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 256 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 315 Query: 312 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccg 371 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 316 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 375 Query: 372 catactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggc 431 | |||||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 376 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 435 Query: 432 acgtcaccggcgagcc 447 | || ||||| ||||| Sbjct: 436 atgtgaccggggagcc 451
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 317 bits (160), Expect = 2e-83 Identities = 232/256 (90%) Strand = Plus / Plus Query: 192 aggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcc 251 ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||| | Sbjct: 186 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 245 Query: 252 tgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctct 311 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 246 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 305 Query: 312 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccg 371 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 306 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 Query: 372 catactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggc 431 | |||||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 366 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 425 Query: 432 acgtcaccggcgagcc 447 | || ||||| ||||| Sbjct: 426 atgtgaccggggagcc 441
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 254 bits (128), Expect = 2e-64 Identities = 164/176 (93%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 266 tccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 325 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||| Sbjct: 326 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcagggg 385 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 || ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 386 acggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcccta 441
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 246 bits (124), Expect = 5e-62 Identities = 163/176 (92%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| || Sbjct: 160 tccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagatc 219 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||| Sbjct: 220 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcagggg 279 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 || ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 280 acggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcccta 335
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 238 bits (120), Expect = 1e-59 Identities = 171/188 (90%) Strand = Plus / Minus Query: 192 aggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcc 251 ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||| | Sbjct: 28774036 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 28773977 Query: 252 tgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctct 311 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 28773976 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 28773917 Query: 312 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccg 371 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28773916 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 28773857 Query: 372 catactac 379 | |||||| Sbjct: 28773856 cctactac 28773849 Score = 151 bits (76), Expect = 2e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 200 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 259 |||||||| ||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 28761419 gacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctg 28761478 Query: 260 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 319 ||||||||| | |||||||||||| |||||||||||| || ||||||| | |||| Sbjct: 28761479 tcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgc 28761538 Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtc 367 ||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 28761539 ttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtc 28761586 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 28749714 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 28749773 Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 |||||||||||||||||||| ||||||||||||||| Sbjct: 28749774 aagctcgtccccggcaactccgccggcaccgtcacc 28749809 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 381 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 440 |||||||||||||||||||||| || |||||||||||||||||||||||| | || |||| Sbjct: 28773772 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 28773713 Query: 441 gcgagcc 447 | ||||| Sbjct: 28773712 gggagcc 28773706 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 381 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 440 ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||| |||| Sbjct: 28749954 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 28750013 Query: 441 gcgagcc 447 ||||||| Sbjct: 28750014 gcgagcc 28750020 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcacc 439 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||| | | Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 28761748 Query: 440 ggcgagcc 447 |||||||| Sbjct: 28761749 ggcgagcc 28761756 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggg 429 ||||||||||||||||||||||||||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctggg 13230430 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||||||||| | ||||||||||||||||| |||| | ||||||||| Sbjct: 28754713 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagcc 28754760 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 347 ggcaactctgccggcaccgtcaccgcatactac 379 |||||||| ||||||||||||||| | |||||| Sbjct: 13230243 ggcaactcggccggcaccgtcaccacctactac 13230275
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 238 bits (120), Expect = 1e-59 Identities = 171/188 (90%) Strand = Plus / Minus Query: 192 aggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcc 251 ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||| | Sbjct: 81811 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 81752 Query: 252 tgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctct 311 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 81751 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 81692 Query: 312 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccg 371 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 81691 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 81632 Query: 372 catactac 379 | |||||| Sbjct: 81631 cctactac 81624 Score = 151 bits (76), Expect = 2e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 200 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 259 |||||||| ||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 69194 gacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctg 69253 Query: 260 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 319 ||||||||| | |||||||||||| |||||||||||| || ||||||| | |||| Sbjct: 69254 tcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgc 69313 Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtc 367 ||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 69314 ttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtc 69361 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 57489 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 57548 Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 |||||||||||||||||||| ||||||||||||||| Sbjct: 57549 aagctcgtccccggcaactccgccggcaccgtcacc 57584 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 381 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 440 |||||||||||||||||||||| || |||||||||||||||||||||||| | || |||| Sbjct: 81547 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 81488 Query: 441 gcgagcc 447 | ||||| Sbjct: 81487 gggagcc 81481 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 381 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 440 ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||| |||| Sbjct: 57729 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 57788 Query: 441 gcgagcc 447 ||||||| Sbjct: 57789 gcgagcc 57795 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcacc 439 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||| | | Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 69523 Query: 440 ggcgagcc 447 |||||||| Sbjct: 69524 ggcgagcc 69531 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||||||||| | ||||||||||||||||| |||| | ||||||||| Sbjct: 62488 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagcc 62535
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 224 bits (113), Expect = 2e-55 Identities = 158/173 (91%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 |||||||||||||||||||| ||||||||||||||| | | |||| ||||||||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggt 381 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| |||||||||||||||||||||||| |||| ||||||||||| Sbjct: 382 tcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagcc 434
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 224 bits (113), Expect = 2e-55 Identities = 158/173 (91%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 |||||||||||||||||||| ||||||||||||||| | | |||| ||||||||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggt 381 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| |||||||||||||||||||||||| |||| ||||||||||| Sbjct: 382 tcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagcc 434
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 222 bits (112), Expect = 8e-55 Identities = 214/248 (86%) Strand = Plus / Plus Query: 200 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 259 |||||||| ||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 185 gacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctg 244 Query: 260 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 319 ||||||||| | |||||||||||| |||||||||||| || ||||||| | |||| Sbjct: 245 tcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgc 304 Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 ||||||||||| |||||||||||||||||||||| |||||||||||| || | | |||| Sbjct: 305 ttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 364 Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcacc 439 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||| | | Sbjct: 365 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 424 Query: 440 ggcgagcc 447 |||||||| Sbjct: 425 ggcgagcc 432
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 222 bits (112), Expect = 8e-55 Identities = 219/252 (86%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 200 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 259 |||||||| |||||||||||||| |||||| |||| |||| || | ||| ||||||||| Sbjct: 234 gacatcacgtggggcgacgggcggggcaaggtccttgacaacgggcggctgctgacgctg 293 Query: 260 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 319 |||||||| |||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 294 tcgctggaccgcacgtccggctccgggttccagtcccggcacgagtacctgttcggcaag 353 Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 |||||||||||||| ||| || || |||||||| ||||||||||||||||| |||||| Sbjct: 354 atcgacatgcagctgcggctggtgccgggcaactccgccggcaccgtcaccgcctactac 413 Query: 380 ctgtcgtcgcaggg-gccgacgcacgacgagatcgacttcgagttcctggggcacgtcac 438 |||||||||||||| | || ||||||||||||||||||||||||||||||| |||| | Sbjct: 414 ctgtcgtcgcagggcggcg-cgcacgacgagatcgacttcgagttcctgggcaacgtgtc 472 Query: 439 cggcgagcccta 450 |||||||||||| Sbjct: 473 cggcgagcccta 484
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 216 bits (109), Expect = 5e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 154 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 213 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 ||| |||||||||||||||| ||||||||||||||| | | |||| ||||||||||||| Sbjct: 214 aagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggt 273 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| |||||||||||||||||||||||| |||| ||||||||||| Sbjct: 274 tcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagcc 326
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 165 bits (83), Expect = 2e-37 Identities = 194/231 (83%) Strand = Plus / Plus Query: 200 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 259 |||||||||||||||||||| || ||||||||||| |||| || ||||||||||||||| Sbjct: 198 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 257 Query: 260 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 319 | |||||| | |||||||| || |||||||||||| | ||||||||| |||| Sbjct: 258 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 317 Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 ||||||||||||||||||||||||| || |||| |||||||||||| || | | ||| Sbjct: 318 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 377 Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggg 430 || ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 378 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctgggg 428
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 165 bits (83), Expect = 2e-37 Identities = 194/231 (83%) Strand = Plus / Plus Query: 200 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 259 |||||||||||||||||||| || ||||||||||| |||| || ||||||||||||||| Sbjct: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264 Query: 260 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 319 | |||||| | |||||||| || |||||||||||| | ||||||||| |||| Sbjct: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324 Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 ||||||||||||||||||||||||| || |||| |||||||||||| || | | ||| Sbjct: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384 Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggg 430 || ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctgggg 435
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 151 bits (76), Expect = 2e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 ||||||||||| |||||||||||| |||||||||||| ||||||| |||| |||||| || Sbjct: 323 tccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagatc 382 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 ||||| || ||||| ||||| ||||||||||||||| | | |||||| ||||| ||||| Sbjct: 383 aagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtcccagggc 442 Query: 395 ccgacgcacgacgagatcgacttcgagttcct 426 || | |||||||||||||||||||||||||| Sbjct: 443 cccaaccacgacgagatcgacttcgagttcct 474 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 tggggcgacgggcgtggcaagatc 232 ||||||||||| |||||||||||| Sbjct: 257 tggggcgacggccgtggcaagatc 280
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 151 bits (76), Expect = 2e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 200 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 259 |||||||| ||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 161985 gacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctg 162044 Query: 260 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 319 ||||||||| | |||||||||||| |||||||||||| || ||||||| | |||| Sbjct: 162045 tcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgc 162104 Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtc 367 ||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 162105 ttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtc 162152 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 150280 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 150339 Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 |||||||||||||||||||| ||||||||||||||| Sbjct: 150340 aagctcgtccccggcaactccgccggcaccgtcacc 150375 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 381 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccg 440 ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||| |||| Sbjct: 150520 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 150579 Query: 441 gcgagcc 447 ||||||| Sbjct: 150580 gcgagcc 150586 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtcacc 439 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||| | | Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 162314 Query: 440 ggcgagcc 447 |||||||| Sbjct: 162315 ggcgagcc 162322 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||||||||| | ||||||||||||||||| |||| | ||||||||| Sbjct: 155279 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagcc 155326
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 147 bits (74), Expect = 4e-32 Identities = 155/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 274 gtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 333 ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | Sbjct: 291 gtccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagat 350 Query: 334 caagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggg 393 |||||| || || |||||||| | ||||| |||||| | | |||||||||||| ||||| Sbjct: 351 caagctggtgccaggcaactccg-tggcacggtcaccaccttctacctgtcgtcccaggg 409 Query: 394 -gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 | || ||||||||||||||||||||||||||||||| |||| | ||| |||||||| Sbjct: 410 cgacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagcccta 466
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 139 bits (70), Expect = 9e-30 Identities = 208/254 (81%) Strand = Plus / Plus Query: 197 ttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacg 256 ||||||||||||||||| || || || || |||||||| ||||| || |||||||| | Sbjct: 331 ttcgacatcacctggggtgatggccgggggaagatcctaaacaacggccagctcctcagc 390 Query: 257 ctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggc 316 || | |||||||| |||||||| ||||| || || || || |||||||||| ||| Sbjct: 391 ctctccctggacaaaacctccggctcagggtttcaatctaaaaaccagtacctctttggc 450 Query: 317 aagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatac 376 || ||||||||||| || |||||||||||||||||||| || || || |||||||| || Sbjct: 451 aacatcgacatgcaactgaagctcgtccccggcaactcggctggaacggtcaccgcctat 510 Query: 377 tacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctggggcacgtc 436 ||||| || || ||||| || || ||||||||||||||||| |||||||| ||| ||||| Sbjct: 511 tacctatcctcacagggccctacccacgacgagatcgactttgagttcctcgggaacgtc 570 Query: 437 accggcgagcccta 450 ||||| ||||||| Sbjct: 571 tccggccagcccta 584
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 121 bits (61), Expect = 2e-24 Identities = 150/177 (84%), Gaps = 2/177 (1%) Strand = Plus / Minus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 ||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||| | Sbjct: 924 tccgggtccgggttccagtccaaggacgagtacctgttcggcaagatcgagatgcagatg 865 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggg- 393 ||||| || || |||||||| || |||||||| || | | ||||||||||||||||| Sbjct: 864 aagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctgtcgtcgcagggc 805 Query: 394 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 | || ||||||||||||||||| | ||||||||||| |||| | ||||||||||| Sbjct: 804 gacg-cgcacgacgagatcgacctggagttcctgggcaacgtgtcgggcgagcccta 749
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 121 bits (61), Expect = 2e-24 Identities = 150/177 (84%), Gaps = 2/177 (1%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 ||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||| | Sbjct: 280 tccgggtccgggttccagtccaaggacgagtacctgttcggcaagatcgagatgcagatg 339 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggg- 393 ||||| || || |||||||| || |||||||| || | | ||||||||||||||||| Sbjct: 340 aagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctgtcgtcgcagggc 399 Query: 394 gccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 | || ||||||||||||||||| | ||||||||||| |||| | ||||||||||| Sbjct: 400 gacg-cgcacgacgagatcgacctggagttcctgggcaacgtgtcgggcgagcccta 455
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 119 bits (60), Expect = 8e-24 Identities = 141/168 (83%) Strand = Plus / Plus Query: 200 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 259 |||||||||||||||||||| || ||||||||||| |||| || ||||||||||||||| Sbjct: 88 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 147 Query: 260 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 319 | |||||| | |||||||| || |||||||||||| | ||||||||| |||| Sbjct: 148 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 207 Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtc 367 ||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 208 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 255 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 383 tcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggg 430 ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 396 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctgggg 443
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 109 bits (55), Expect = 8e-21 Identities = 94/107 (87%) Strand = Plus / Plus Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 |||||||||||| ||||| ||||||| || ||||| |||||||||||||| || |||||| Sbjct: 311 atcgacatgcagatcaaggtcgtccctggtaactccgccggcaccgtcacagcctactac 370 Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcct 426 || || || ||||| |||||||||||||||||||||| |||||||| Sbjct: 371 ctctcctcccagggaacgacgcacgacgagatcgactttgagttcct 417
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 333 tcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg 392 ||||||||||| ||||| |||| ||||||||||||||||| | |||||||||||||||| Sbjct: 275 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 334 Query: 393 ggccgacgcacgacgagatcgacttcgagttcctgggg 430 || ||||||||||||||||||||||||||||||| Sbjct: 335 actcggagcacgacgagatcgacttcgagttcctgggg 372
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 333 tcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg 392 ||||||||||| ||||| |||| ||||||||||||||||| | |||||||||||||||| Sbjct: 272 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 331 Query: 393 ggccgacgcacgacgagatcgacttcgagttcctgggg 430 || ||||||||||||||||||||||||||||||| Sbjct: 332 actcggagcacgacgagatcgacttcgagttcctgggg 369
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 105 bits (53), Expect = 1e-19 Identities = 143/173 (82%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 211 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatg 270 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 ||||||||||||||| | || ||||||| ||| || | | ||||||| | ||| |||| Sbjct: 271 aagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggga 330 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 331 gatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagcc 383
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 105 bits (53), Expect = 1e-19 Identities = 143/173 (82%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 279 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatg 338 Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 ||||||||||||||| | || ||||||| ||| || | | ||||||| | ||| |||| Sbjct: 339 aagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggga 398 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 399 gatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagcc 451
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 351 actctgccggcaccgtcaccgcatactacctgtcgtcgcaggggccgacgcacgacgaga 410 |||| ||||||||||| ||||| |||||| |||| ||||| |||||||| |||||||||| Sbjct: 1 actccgccggcaccgtgaccgcttactacttgtcttcgcaagggccgactcacgacgaga 60 Query: 411 tcgacttcgagttcctgggg 430 | |||||||||||||||||| Sbjct: 61 ttgacttcgagttcctgggg 80
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 266 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 325 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 326 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 385 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 386 tc 387 || Sbjct: 341 tc 342
>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 1068 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 266 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 325 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 326 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 385 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 386 tc 387 || Sbjct: 341 tc 342
>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA, complete cds Length = 1100 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 266 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 325 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 210 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 269 Query: 326 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 385 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 270 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 329 Query: 386 tc 387 || Sbjct: 330 tc 331
>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 901 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 266 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 325 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 169 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 228 Query: 326 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 385 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 229 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 288 Query: 386 tc 387 || Sbjct: 289 tc 290
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 ||||||||||| |||||||| || || ||||| ||| ||| |||| |||| || || ||| Sbjct: 8 aagctcgtcccgggcaactccgctggtaccgttaccacattctacttgtcttcccaaggg 67 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggg 429 |||| ||||||||||||||||||||||||||||| Sbjct: 68 ccgaatcacgacgagatcgacttcgagttcctggg 102
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 333 tcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg 392 ||||||||||| |||| |||| |||||||| |||||||| | |||||||||||||||| Sbjct: 324 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 383 Query: 393 ggccgacgcacgacgagatcgacttcgagttcctgggg 430 || ||||||||||||||||||||||||| ||||| Sbjct: 384 actcggagcacgacgagatcgacttcgagttcttgggg 421
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 266 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 325 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 18979 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 19038 Query: 326 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||| Sbjct: 19039 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 19092 Score = 42.1 bits (21), Expect = 1.5 Identities = 81/101 (80%) Strand = Plus / Plus Query: 278 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 337 ||||| || ||||| |||||| |||| || | ||||| || |||||||||||| |||| Sbjct: 17324 ggctcaggattccaatccaagaacgaatatttgttcggtaaaatcgacatgcagatcaaa 17383 Query: 338 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 ||||| |||| ||||| || || || |||||||| ||||| Sbjct: 17384 ctcgttgccggaaactccgctggaactgtcaccgcttacta 17424
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 266 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 325 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 27900 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 27959 Query: 326 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||| Sbjct: 27960 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 28013 Score = 42.1 bits (21), Expect = 1.5 Identities = 81/101 (80%) Strand = Plus / Plus Query: 278 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 337 ||||| || ||||| |||||| |||| || | ||||| || |||||||||||| |||| Sbjct: 26245 ggctcaggattccaatccaagaacgaatatttgttcggtaaaatcgacatgcagatcaaa 26304 Query: 338 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 ||||| |||| ||||| || || || |||||||| ||||| Sbjct: 26305 ctcgttgccggaaactccgctggaactgtcaccgcttacta 26345
>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full insert sequence Length = 634 Score = 83.8 bits (42), Expect = 5e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 328 |||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 252 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatg 305
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 333 tcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg 392 ||||||||||| |||| |||| ||||||||||||||||| | |||||||||||| ||| Sbjct: 285 tcaagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctgtcgtcacaga 344 Query: 393 ggccgacgcacgacgagatcgacttcgagttcctgggg 430 || ||||||||||||||||||||||||| ||||| Sbjct: 345 actcggagcacgacgagatcgacttcgagttcttgggg 382
>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2) mRNA, complete cds Length = 1375 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 298 gcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgc 357 ||||||||| || || || |||||||| |||||||||||||| ||||| || || ||||| Sbjct: 236 gcacgagtatctatttggtaagatcgatatgcagctcaagctggtccctggaaattctgc 295 Query: 358 cggcaccgtcaccgcatactacctgtcgtcgcaggggccgacgcacgacgagatcgactt 417 ||||||||| || || || || || || || || ||||| || || || ||||||||||| Sbjct: 296 cggcaccgttactgcttattatctttcatcacaagggcctacccatgatgagatcgactt 355 Query: 418 cgagttcct 426 ||||||||| Sbjct: 356 cgagttcct 364
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 399 cgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 32715 cgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagcc 32667 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 32994 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatg 32935 Query: 335 aagctcgtccccggc 349 ||||||||||||||| Sbjct: 32934 aagctcgtccccggc 32920 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 ||||||||||||||| | |||||||| || |||||||||||||||| Sbjct: 29159 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagcc 29205
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 399 cgcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 30557007 cgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagcc 30556959 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 |||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 30557286 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatg 30557227 Query: 335 aagctcgtccccggc 349 ||||||||||||||| Sbjct: 30557226 aagctcgtccccggc 30557212 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 32180420 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 32180467 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 ||||||||||||||| | |||||||| || |||||||||||||||| Sbjct: 30553451 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagcc 30553497 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccgg 441 ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 30508420 cacgacgagatcgacctggagttcctgggcaacgtcaccgg 30508380 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 30508619 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 321 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 30517206 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 30517157
>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete cds Length = 1221 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 278 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 337 ||||| || ||||| |||||| |||| ||||| || ||||| || |||||||| ||||| Sbjct: 266 ggctcgggtttccaatccaagaacgaatacctttttggcaaaattgacatgcaactcaaa 325 Query: 338 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 || ||||| ||||||||||| ||||||||||| || ||||| Sbjct: 326 ctagtccctggcaactctgctggcaccgtcactgcctacta 366
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 394 ||||||||| |||| |||| || ||||||||||| || | |||||||||||||||| Sbjct: 297 aagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgcagaac 356 Query: 395 ccgacgcacgacgagatcgacttcgagttcctggg 429 || ||||||||||||||||| |||||||||||| Sbjct: 357 tcggagcacgacgagatcgactccgagttcctggg 391
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 344 cccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggggccgacgcac 403 ||||| || ||||| || ||||||||| | | |||| |||||||||| ||| ||| |||| Sbjct: 4 cccgggaattctgcggggaccgtcaccaccttctacttgtcgtcgcaagggtcgatgcac 63 Query: 404 gacgagatcgacttcgagttcct 426 ||||||||||| ||||||||||| Sbjct: 64 gacgagatcgatttcgagttcct 86
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 326 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 385 ||||||||||||||||| ||||||||||||| ||||| ||||| || |||||| |||| Sbjct: 261 atgcagctcaagctcgttgccggcaactctgctggcactgtcactgcttactacttgtca 320 Query: 386 tcgcaggggccgacgcacgacgagatcgacttcgagtt 423 || || ||||| || || || ||||| || |||||||| Sbjct: 321 tcccaagggccaacacatgatgagattgatttcgagtt 358
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds AT5G57550 (XTR3) mRNA, complete cds Length = 1059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 311 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 251 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 371 gcatactac 379 || |||||| Sbjct: 311 gcctactac 319
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds Length = 855 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 311 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 214 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 273 Query: 371 gcatactac 379 || |||||| Sbjct: 274 gcctactac 282
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds Length = 1060 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 311 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 251 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 371 gcatactac 379 || |||||| Sbjct: 311 gcctactac 319
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 311 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 228 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 287 Query: 371 gcatactac 379 || |||||| Sbjct: 288 gcctactac 296
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 311 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 37112 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 37053 Query: 371 gcatactac 379 || |||||| Sbjct: 37052 gcctactac 37044
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene, complete cds Length = 2703 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 311 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 1331 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 1390 Query: 371 gcatactac 379 || |||||| Sbjct: 1391 gcctactac 1399
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR3) mRNA, 3' end, partial cds Length = 1017 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 311 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 193 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 252 Query: 371 gcatactac 379 || |||||| Sbjct: 253 gcctactac 261
>ref|NM_113277.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT3G23730 mRNA, complete cds Length = 1074 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 423 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 63.9 bits (32), Expect = 4e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 255 cgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcg 314 |||||| ||| ||| ||| |||||||||||| ||| |||||||| | |||||||||||| Sbjct: 192 cgctggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcg 251 Query: 315 gcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 || || || | | | | | ||||||||| ||||||||| ||||||||||||||| Sbjct: 252 gcgagttccaggtccggatgaagctcgtcgacggcaactccgccggcaccgtcacc 307 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggg 429 ||||||||||||||| |||||||| |||| Sbjct: 341 cacgacgagatcgacatcgagttcatggg 369
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 76109 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 76156
>gb|AY084449.1| Arabidopsis thaliana clone 10852 mRNA, complete sequence Length = 1076 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 327 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 386 Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 423 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 387 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 430
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 63.9 bits (32), Expect = 4e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 255 cgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcg 314 |||||| ||| ||| ||| |||||||||||| ||| |||||||| | |||||||||||| Sbjct: 201 cgctggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcg 260 Query: 315 gcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 || || |||| | || | ||||||||| ||||||||| |||||||| |||||| Sbjct: 261 gcgagttcgaggtcaagatgaagctcgtcgacggcaactccgccggcacagtcacc 316
>dbj|AK175805.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A12 Length = 1084 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 423 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>dbj|AK175804.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A11 Length = 1084 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 380 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 423 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 331 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 378
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 335 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 382
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 31596 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 31643
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctgggg 430 ||||||||||||||||||||||||||||||| Sbjct: 113473 gcacgacgagatcgacttcgagttcctgggg 113503 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 333 tcaagctcgtccccggcaactctgccggcaccgtcaccgc 372 ||||||||||| ||||| |||| ||||||||||||||||| Sbjct: 113311 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 113350
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctgggg 430 ||||||||||||||||||||||||||||||| Sbjct: 13092 gcacgacgagatcgacttcgagttcctgggg 13122 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 333 tcaagctcgtccccggcaactctgccggcaccgtcaccgc 372 ||||||||||| ||||| |||| ||||||||||||||||| Sbjct: 12930 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 12969
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctgggg 430 ||||||||||||||||||||||||||||||| Sbjct: 19010275 gcacgacgagatcgacttcgagttcctgggg 19010305 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 333 tcaagctcgtccccggcaactctgccggcaccgtcaccgc 372 ||||||||||| ||||| |||| ||||||||||||||||| Sbjct: 19010113 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 19010152
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 336 agctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||||||||||||| ||||||||||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcacc 10358939 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggg 429 |||||||||||||||||||||||||||||| Sbjct: 10359113 gcacgacgagatcgacttcgagttcctggg 10359142 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 341 gtccccggcaactctgccggcaccgtcaccgcatactac 379 ||||||||||| || ||||||||||||||| |||||||| Sbjct: 10363481 gtccccggcaattcggccggcaccgtcaccacatactac 10363519 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | ||||||||||||||||| Sbjct: 28642113 gacgcacgacgagctggacttcgagttcctggg 28642145 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggg 429 |||||||||| | ||||||||||||||||| Sbjct: 1445478 gcacgacgagctggacttcgagttcctggg 1445507 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttc 424 ||||||||||||||||| |||||| Sbjct: 10363968 cacgacgagatcgactttgagttc 10363991 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gcgccctggcggcggcgagg 184 |||||||||||||||||||| Sbjct: 795921 gcgccctggcggcggcgagg 795902
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 336 agctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||||||||||||| ||||||||||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcacc 1361 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggg 429 |||||||||||||||||||||||||||||| Sbjct: 1535 gcacgacgagatcgacttcgagttcctggg 1564 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 341 gtccccggcaactctgccggcaccgtcaccgcatactac 379 ||||||||||| || ||||||||||||||| |||||||| Sbjct: 5903 gtccccggcaattcggccggcaccgtcaccacatactac 5941 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttc 424 ||||||||||||||||| |||||| Sbjct: 6390 cacgacgagatcgactttgagttc 6413
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 336 agctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||||||||||||| ||||||||||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcacc 124749 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggg 429 |||||||||||||||||||||||||||||| Sbjct: 124923 gcacgacgagatcgacttcgagttcctggg 124952
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctgggg 430 ||||||||||||||||||||||||||||||| Sbjct: 19168924 gcacgacgagatcgacttcgagttcctgggg 19168954 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 333 tcaagctcgtccccggcaactctgccggcaccgtcaccgc 372 ||||||||||| ||||| |||| ||||||||||||||||| Sbjct: 19168762 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 19168801
>gb|BT020422.1| Arabidopsis thaliana At4g14130 mRNA, complete cds Length = 870 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 379 cctgtc 384 | |||| Sbjct: 276 cttgtc 281
>ref|NM_117490.2| Arabidopsis thaliana XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G14130 (XTR7) mRNA, complete cds Length = 1064 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 379 cctgtc 384 | |||| Sbjct: 361 cttgtc 366
>gb|AY045865.1| Arabidopsis thaliana putative xyloglucan endotransglycosylase-related protein XTR-7 (At4g14130) mRNA, complete cds Length = 1075 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 379 cctgtc 384 | |||| Sbjct: 361 cttgtc 366
>emb|BX841553.1|CNS09YH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 279 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 338 Query: 379 cctgtc 384 | |||| Sbjct: 339 cttgtc 344
>gb|AY087282.1| Arabidopsis thaliana clone 33554 mRNA, complete sequence Length = 1060 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 379 cctgtc 384 | |||| Sbjct: 361 cttgtc 366
>gb|U43489.1|ATU43489 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR7) mRNA, complete cds Length = 979 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 379 cctgtc 384 | |||| Sbjct: 276 cttgtc 281
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 95873 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 95814 Query: 379 c 379 | Sbjct: 95813 c 95813
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 35421 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 35362 Query: 379 c 379 | Sbjct: 35361 c 35361
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggg 429 ||||||||||||||||||||||||||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctggg 147618 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 347 ggcaactctgccggcaccgtcaccgcatactac 379 |||||||| ||||||||||||||| | |||||| Sbjct: 147431 ggcaactcggccggcaccgtcaccacctactac 147463
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggg 429 ||||||||||||||||||||||||||||| Sbjct: 643 cacgacgagatcgacttcgagttcctggg 671 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 347 ggcaactctgccggcaccgtcaccgcatactac 379 |||||||| ||||||||||||||| | |||||| Sbjct: 589 ggcaactcggccggcaccgtcaccacctactac 621
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 275 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 334 ||||||||||| ||| | |||||| || |||||||||||||| || || | | | | | Sbjct: 229 tccggctccggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatg 288 Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 289 aagctcgtcgacggcaactccgccggcaccgtcacc 324
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 |||| ||||| ||||||||||||||||||| |||| ||||||||||| Sbjct: 390 gcacaacgagttcgacttcgagttcctgggcaacgtgaccggcgagcc 437
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcc 447 ||||||||||||||| | |||||||| || |||||||||||||||| Sbjct: 325 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagcc 371
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 397 gacgcacgacgagatcgacttcgagttcctggggcacgt 435 ||||||||||||| | |||||||||||||||||| |||| Sbjct: 7311670 gacgcacgacgagctggacttcgagttcctggggaacgt 7311632 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 404 gacgagatcgacttcgagttcct 426 ||||||||||||||||||||||| Sbjct: 944218 gacgagatcgacttcgagttcct 944240 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | |||||||||||| |||| Sbjct: 35691476 gacgcacgacgagctggacttcgagttcttggg 35691444
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 397 gacgcacgacgagatcgacttcgagttcctggggcacgt 435 ||||||||||||| | |||||||||||||||||| |||| Sbjct: 62926 gacgcacgacgagctggacttcgagttcctggggaacgt 62888
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 397 gacgcacgacgagatcgacttcgagttcctggggcacgt 435 ||||||||||||| | |||||||||||||||||| |||| Sbjct: 7309565 gacgcacgacgagctggacttcgagttcctggggaacgt 7309527 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 404 gacgagatcgacttcgagttcct 426 ||||||||||||||||||||||| Sbjct: 944216 gacgagatcgacttcgagttcct 944238 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | |||||||||||| |||| Sbjct: 35781549 gacgcacgacgagctggacttcgagttcttggg 35781517
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcct 426 ||||||||||||||||||||||||||| Sbjct: 445 gcacgacgagatcgacttcgagttcct 471
>dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G03, full insert sequence Length = 1194 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggggcacgt 435 ||||||||||||| | |||||||||||||||||| |||| Sbjct: 433 gacgcacgacgagctggacttcgagttcctggggaacgt 471
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||| | ||| | |||||||| ||| ||||||||||||||||||| Sbjct: 346 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagcccta 395
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||| | ||| | |||||||| ||| ||||||||||||||||||| Sbjct: 8379000 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagcccta 8378951 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacc 8321992
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||| | ||| | |||||||| ||| ||||||||||||||||||| Sbjct: 119109 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagcccta 119060 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacc 62101
>ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | ||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctggg 508
>ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-group), B1053A04.26-1 mRNA Length = 1395 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | ||||||||||||||||| Sbjct: 478 gacgcacgacgagctggacttcgagttcctggg 510
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccgg 441 ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 316 cacgacgagatcgacctggagttcctgggcaacgtcaccgg 356 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 228 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 279
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccgg 441 ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 141797 cacgacgagatcgacctggagttcctgggcaacgtcaccgg 141757 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 141996 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 321 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 150583 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 150534
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtc 367 |||||| ||||||||||||| |||||||||||| Sbjct: 328 aagctcatccccggcaactccgccggcaccgtc 360
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | ||||||||||||||||| Sbjct: 106126 gacgcacgacgagctggacttcgagttcctggg 106158
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 50.1 bits (25), Expect = 0.006 Identities = 89/108 (82%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 346 cggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg-ggccgacg--ca 402 ||||||||| ||||||||||||||| | | ||||||| |||| || || ||||| || Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggca 355 Query: 403 cgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||||||| |||||||| |||| || ||| |||||| ||||| Sbjct: 356 cgacgagatcgacatcgagttcatgggcaacctcagcggcgaccccta 403
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 50.1 bits (25), Expect = 0.006 Identities = 89/108 (82%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 346 cggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg-ggccgacg--ca 402 ||||||||| ||||||||||||||| | | ||||||| |||| || || ||||| || Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggca 355 Query: 403 cgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||||||| |||||||| |||| || ||| |||||| ||||| Sbjct: 356 cgacgagatcgacatcgagttcatgggcaacctcagcggcgaccccta 403
>dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A05, full insert sequence Length = 1368 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | ||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctggg 508
>dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H14, full insert sequence Length = 1394 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | ||||||||||||||||| Sbjct: 477 gacgcacgacgagctggacttcgagttcctggg 509
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccgg 441 ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 379 cacgacgagatcgacctggagttcctgggcaacgtcaccgg 419 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 291 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 342
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtc 367 |||||| ||||||||||||| |||||||||||| Sbjct: 353 aagctcatccccggcaactccgccggcaccgtc 385
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacc 319
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacc 324
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacc 315
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 320 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 379 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 24457 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 24516
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacc 324
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 323 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 272
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 335 aagctcgtccccggcaactctgccggcaccgtcacc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacc 319
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 404 gacgagatcgacttcgagttcct 426 ||||||||||||||||||||||| Sbjct: 99415 gacgagatcgacttcgagttcct 99437
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 404 gacgagatcgacttcgagttcctgggg 430 ||||| ||||||||||||||||||||| Sbjct: 424 gacgaaatcgacttcgagttcctgggg 450
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 404 gacgagatcgacttcgagttcct 426 ||||||||||||||||||||||| Sbjct: 355 gacgagatcgacttcgagttcct 377
>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108, complete sequence Length = 117124 Score = 46.1 bits (23), Expect = 0.098 Identities = 62/75 (82%) Strand = Plus / Minus Query: 305 tacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcacc 364 |||||||| || | ||| || |||||||||||||| || | ||||||||||| ||||| Sbjct: 92397 tacctctttgggaggattgatatgcagctcaagcttgttgctggcaactctgctggcact 92338 Query: 365 gtcaccgcatactac 379 ||||| || |||||| Sbjct: 92337 gtcactgcttactac 92323
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctgggg 430 |||||| |||||||||||||||||| ||||| Sbjct: 353 gcacgatgagatcgacttcgagttcttgggg 383
>ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggg 429 |||||||||| | ||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctggg 665
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||||||||| | ||||||||||| | || ||||||||||||| Sbjct: 361 cacgacgagatcgacatggagttcctgggcaccatccccggcgagcccta 410
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 321 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 206 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 255
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds Length = 590284 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 ttccagcttttcatccttctca 43 |||||||||||||||||||||| Sbjct: 29251 ttccagcttttcatccttctca 29272
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 346 cggcaactctgccggcaccgtcaccgcatactacctgtcgtc 387 ||||||||| ||||||||||||||| | | ||||||| |||| Sbjct: 307 cggcaactccgccggcaccgtcacctccttctacctgacgtc 348
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctgggg 430 |||||||||||||| ||||||||| ||||| Sbjct: 370 cacgacgagatcgatttcgagttcttgggg 399
>gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotransglucosylase/hydrolase (XTH1) mRNA, complete cds Length = 849 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 404 gacgagatcgacttcgagttcctggg 429 |||||||||||| ||||||||||||| Sbjct: 295 gacgagatcgacctcgagttcctggg 320
>gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, complete sequence Length = 163926 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 ttccagcttttcatccttctca 43 |||||||||||||||||||||| Sbjct: 92371 ttccagcttttcatccttctca 92350
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 321 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 278 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 327
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||||||||| | ||||||||||| | || ||||||||||||| Sbjct: 17438276 cacgacgagatcgacatggagttcctgggcaccatccccggcgagcccta 17438325 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 403 cgacgagatcgacttcgagttcctgggg 430 ||||||| | |||||||||||||||||| Sbjct: 20676460 cgacgagctggacttcgagttcctgggg 20676487
>emb|BX827656.1|CNS0A2HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 44.1 bits (22), Expect = 0.39 Identities = 55/66 (83%) Strand = Plus / Plus Query: 319 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||| |||||||||| || ||| |||| |||| |||||||||||||| || ||||| Sbjct: 285 gatcgatatgcagctcagacttgtcgccggagactcggccggcaccgtcactgcttacta 344 Query: 379 cctgtc 384 | |||| Sbjct: 345 cttgtc 350
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctggggcacgtcaccggcgagcccta 450 ||||||||||||||| | ||||||||||| | || ||||||||||||| Sbjct: 106500 cacgacgagatcgacatggagttcctgggcaccatccccggcgagcccta 106549
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggg 429 |||||||||| | ||||||||||||||||| Sbjct: 126750 gcacgacgagctggacttcgagttcctggg 126779
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 346 cggcaactctgccggcaccgtcaccgcatactacctgtcgtc 387 ||||||||| ||||||||||||||| | | ||||||| |||| Sbjct: 295 cggcaactccgccggcaccgtcacctccttctacctgacgtc 336
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggg 429 |||||||||| | ||||||||||||||||| Sbjct: 8899 gcacgacgagctggacttcgagttcctggg 8928
>dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H23, full insert sequence Length = 1562 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 gcacgacgagatcgacttcgagttcctggg 429 |||||||||| | ||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctggg 665
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 321 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 370 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 296 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 345
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 401 cacgacgagatcgacttcgagttcctgggg 430 |||||||||||||| ||||||||| ||||| Sbjct: 436 cacgacgagatcgatttcgagttcttgggg 465
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 catggcggtgtcggtgctggcg 148 |||||||||||||||||||||| Sbjct: 2218712 catggcggtgtcggtgctggcg 2218691
>ref|NM_118713.2| Arabidopsis thaliana XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25810 (XTR6) mRNA, complete cds Length = 1078 Score = 42.1 bits (21), Expect = 1.5 Identities = 81/101 (80%) Strand = Plus / Plus Query: 278 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 337 ||||| || ||||| |||||| |||| || | ||||| || |||||||||||| |||| Sbjct: 217 ggctcaggattccaatccaagaacgaatatttgttcggtaaaatcgacatgcagatcaaa 276 Query: 338 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 ||||| |||| ||||| || || || |||||||| ||||| Sbjct: 277 ctcgttgccggaaactccgctggaactgtcaccgcttacta 317
>ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | |||||||||||| |||| Sbjct: 456 gacgcacgacgagctggacttcgagttcttggg 488
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | |||||||||||| |||| Sbjct: 89254 gacgcacgacgagctggacttcgagttcttggg 89222
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gctccgggttccagtccaagcacga 303 ||||||||||||||||| ||||||| Sbjct: 90144 gctccgggttccagtcccagcacga 90120
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 gctggcgctggacaaggtgtccggc 280 ||||||||||||||||||| ||||| Sbjct: 1311448 gctggcgctggacaaggtgcccggc 1311472
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggcaagatcgacatgcagctcaag 337 ||||||||||||||||||| ||||| Sbjct: 511026 cggcaagatcgacatgcagatcaag 511050
>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence Length = 70347 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 aactctgccggcaccgtcaccgcatacta 378 |||||||| ||||| |||||||||||||| Sbjct: 59824 aactctgctggcactgtcaccgcatacta 59852
>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete sequence Length = 70497 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 aactctgccggcaccgtcaccgcatacta 378 |||||||| ||||| |||||||||||||| Sbjct: 59824 aactctgctggcactgtcaccgcatacta 59852
>dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A12, full insert sequence Length = 1326 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | |||||||||||| |||| Sbjct: 407 gacgcacgacgagctggacttcgagttcttggg 439
>dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H18, full insert sequence Length = 1359 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 397 gacgcacgacgagatcgacttcgagttcctggg 429 ||||||||||||| | |||||||||||| |||| Sbjct: 460 gacgcacgacgagctggacttcgagttcttggg 492
>gb|AC005828.1|AC005828 Homo sapiens chromosome 17, clone hRPK.269_G_24, complete sequence Length = 163685 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tcccttccagcttttcatcct 38 ||||||||||||||||||||| Sbjct: 111619 tcccttccagcttttcatcct 111639
>gb|U43488.1|ATU43488 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR6) mRNA, complete cds Length = 885 Score = 42.1 bits (21), Expect = 1.5 Identities = 81/101 (80%) Strand = Plus / Plus Query: 278 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 337 ||||| || ||||| |||||| |||| || | ||||| || |||||||||||| |||| Sbjct: 169 ggctcaggattccaatccaagaacgaatatttgttcggtaaaatcgacatgcagatcaaa 228 Query: 338 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 ||||| |||| ||||| || || || |||||||| ||||| Sbjct: 229 ctcgttgccggaaactccgctggaactgtcaccgcttacta 269
>ref|XM_463866.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcgccctggcggcggcgagg 184 |||||||||||||||||||| Sbjct: 360 gcgccctggcggcggcgagg 379
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 403 cgacgagatcgacttcgagttcctgggg 430 ||||||| | |||||||||||||||||| Sbjct: 345 cgacgagctggacttcgagttcctgggg 372
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 403 cgacgagatcgacttcgagttcctgggg 430 ||||||| | |||||||||||||||||| Sbjct: 437 cgacgagctggacttcgagttcctgggg 464
>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224115 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tatttgtcttgtgacttgtg 69 |||||||||||||||||||| Sbjct: 221597 tatttgtcttgtgacttgtg 221616
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 133 ggtgtcggtgctggcgatcctgctcgcc 160 |||| ||||| ||||||||||||||||| Sbjct: 3145732 ggtgccggtgatggcgatcctgctcgcc 3145705
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 ggctccgggttccagtccaagcac 301 ||||||||||||||| |||||||| Sbjct: 108026 ggctccgggttccagcccaagcac 108003
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 ggtgtcggtgctggcgatcctgctcgcc 160 |||| ||||| ||||||||||||||||| Sbjct: 1655427 ggtgccggtgatggcgatcctgctcgcc 1655454
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 ggctccgggttccagtccaagcac 301 ||||||||||||||| |||||||| Sbjct: 17463 ggctccgggttccagcccaagcac 17440
>gb|BT014081.1| Lycopersicon esculentum clone 133181F, mRNA sequence Length = 1229 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 323 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||||||||||| || ||||| || || ||||| ||||| ||||| || ||||| Sbjct: 251 gacatgcagctcaaacttgtcccaggaaattctgctggcactgtcactgcttacta 306
>gb|AY497476.1| Lycopersicon esculentum xyloglucan endotransglucosylase-hydrolase XTH3 (XTH3) mRNA, complete cds Length = 1055 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 323 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 378 |||||||||||||| || ||||| || || ||||| ||||| ||||| || ||||| Sbjct: 244 gacatgcagctcaaacttgtcccaggaaattctgctggcactgtcactgcttacta 299
>gb|AY460341.1| Oncopeltus fasciatus hunchback mRNA, complete cds Length = 2071 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cgacatcacctggggcgacg 218 |||||||||||||||||||| Sbjct: 723 cgacatcacctggggcgacg 742
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ctgacgctggcgctggacaaggtg 274 |||||||||||||||| ||||||| Sbjct: 195103 ctgacgctggcgctggccaaggtg 195126
>gb|AC122345.4| Mus musculus BAC clone RP23-366P9 from chromosome 6, complete sequence Length = 199923 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tatttgtcttgtgacttgtg 69 |||||||||||||||||||| Sbjct: 66091 tatttgtcttgtgacttgtg 66110
>gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence Length = 765 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 gagatcgacttcgagttcctgggg 430 |||||||||||||||||| ||||| Sbjct: 1 gagatcgacttcgagttcttgggg 24
>gb|AC121984.3| Mus musculus BAC clone RP24-292L23 from chromosome 3, complete sequence Length = 145348 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cttttcatccttctcatcaa 47 |||||||||||||||||||| Sbjct: 112181 cttttcatccttctcatcaa 112162
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 ggtgtcggtgctggcgatcctgctcgcc 160 |||| ||||| ||||||||||||||||| Sbjct: 1542370 ggtgccggtgatggcgatcctgctcgcc 1542397
>gb|DQ382358.1| Glycine max clone pSXET1a xyloglucan endotransglycosylase precursor (XET1) mRNA, partial cds Length = 681 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 302 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgc 357 |||||| | ||||| || || ||||||||||||||||| || || || |||||||| Sbjct: 354 gagtacttgttcggaaaaattgacatgcagctcaagcttgtgcctggtaactctgc 409
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cgatcctgctcgcctggtgc 166 |||||||||||||||||||| Sbjct: 1726715 cgatcctgctcgcctggtgc 1726734
>gb|AY129331.1| Mycobacteriophage CJW1, complete genome Length = 75931 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gtgctggcgatcctgctcgc 159 |||||||||||||||||||| Sbjct: 796 gtgctggcgatcctgctcgc 815
>gb|AF165214.1|AF165214 Bacteriophage D3, complete genome Length = 56425 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ggtgctggcgatcctgctcg 158 |||||||||||||||||||| Sbjct: 54849 ggtgctggcgatcctgctcg 54868
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tgctggcgatcctgctcgcc 160 |||||||||||||||||||| Sbjct: 925869 tgctggcgatcctgctcgcc 925888
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctgacgctggcgctggacaa 270 |||||||||||||||||||| Sbjct: 1832811 ctgacgctggcgctggacaa 1832792
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gcgccctggcggcggcgagg 184 |||||||||||||||||||| Sbjct: 5129 gcgccctggcggcggcgagg 5110
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gcgccctggcggcggcgagg 184 |||||||||||||||||||| Sbjct: 74052 gcgccctggcggcggcgagg 74033
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gctggcgatcctgctcgcct 161 |||||||||||||||||||| Sbjct: 5519571 gctggcgatcctgctcgcct 5519590
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 gacgagatcgacttcgagttcctg 427 |||||||||||||||||| ||||| Sbjct: 4194088 gacgagatcgacttcgagatcctg 4194111
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 403 cgacgagatcgacttcgagttcctgggg 430 ||||||| | |||||||||||||||||| Sbjct: 29210 cgacgagctggacttcgagttcctgggg 29237
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 403 cgacgagatcgacttcgagttcctgggg 430 ||||||| | |||||||||||||||||| Sbjct: 437 cgacgagctggacttcgagttcctgggg 464
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 403 cgacgagatcgacttcgagttcctgggg 430 ||||||| | |||||||||||||||||| Sbjct: 531 cgacgagctggacttcgagttcctgggg 558
>gb|AC108437.14| Mus musculus chromosome 13, clone RP23-207N7, complete sequence Length = 194800 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tgaacaatggtcagctcctg 253 |||||||||||||||||||| Sbjct: 38279 tgaacaatggtcagctcctg 38298
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 133 ggtgtcggtgctggcgatcctgctcgcc 160 |||| ||||| ||||||||||||||||| Sbjct: 3230785 ggtgccggtgatggcgatcctgctcgcc 3230758
>gb|AC145743.4| Mus musculus BAC clone RP24-171K11 from 3, complete sequence Length = 174136 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cttttcatccttctcatcaa 47 |||||||||||||||||||| Sbjct: 126267 cttttcatccttctcatcaa 126248 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,957,669 Number of Sequences: 3902068 Number of extensions: 2957669 Number of successful extensions: 61171 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59228 Number of HSP's gapped (non-prelim): 1922 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
