ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet92e01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 157 bits (79), Expect = 4e-35 Identities = 165/193 (85%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 251 ccgccgccgccggccccggcgggggcggaggcgacgacatcgccagcgccgccgtcaccg 310 |||||||||||||||| ||||| || |||| |||||||| ||| |||| | |||||| Sbjct: 32153 ccgccgccgccggcccaggcggaggaggag---acgacatcaccaccgccctcatcaccg 32209 Query: 311 ccgtcaccttcgtcgccatcgtcacggccgccaccttcttcatggcgctgctcttctact 370 |||| |||||||||| ||||||||||||||||||| || | ||| | ||||||||| Sbjct: 32210 ccgtgaccttcgtcgtggccgtcacggccgccaccttcctcctcgcgttcctcttctacc 32269 Query: 371 tccgctgcacgccctgcctccgcgcctacctcggcctctccgcgatctgggtcctcctgc 430 ||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| | Sbjct: 32270 tccgctgcacgccctgcctccgcgcctacctcggcttctcctcgctctccgtcctcctcc 32329 Query: 431 tcctcggcggcca 443 ||||||||||||| Sbjct: 32330 tcctcggcggcca 32342 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 124 ctcgactccctcggcgaggacatcacccgcatcgtcggcccggtctccgcatgcatgctc 183 ||||| |||||||| ||||||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 32026 ctcgattccctcggggaggacatcacccgcatcgtcacccccgtctccacctgcatgctc 32085 Query: 184 atcgtcgtc 192 |||||||| Sbjct: 32086 ctcgtcgtc 32094
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 4e-35 Identities = 165/193 (85%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 251 ccgccgccgccggccccggcgggggcggaggcgacgacatcgccagcgccgccgtcaccg 310 |||||||||||||||| ||||| || |||| |||||||| ||| |||| | |||||| Sbjct: 22436906 ccgccgccgccggcccaggcggaggaggag---acgacatcaccaccgccctcatcaccg 22436962 Query: 311 ccgtcaccttcgtcgccatcgtcacggccgccaccttcttcatggcgctgctcttctact 370 |||| |||||||||| ||||||||||||||||||| || | ||| | ||||||||| Sbjct: 22436963 ccgtgaccttcgtcgtggccgtcacggccgccaccttcctcctcgcgttcctcttctacc 22437022 Query: 371 tccgctgcacgccctgcctccgcgcctacctcggcctctccgcgatctgggtcctcctgc 430 ||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| | Sbjct: 22437023 tccgctgcacgccctgcctccgcgcctacctcggcttctcctcgctctccgtcctcctcc 22437082 Query: 431 tcctcggcggcca 443 ||||||||||||| Sbjct: 22437083 tcctcggcggcca 22437095 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 124 ctcgactccctcggcgaggacatcacccgcatcgtcggcccggtctccgcatgcatgctc 183 ||||| |||||||| ||||||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 22436779 ctcgattccctcggggaggacatcacccgcatcgtcacccccgtctccacctgcatgctc 22436838 Query: 184 atcgtcgtc 192 |||||||| Sbjct: 22436839 ctcgtcgtc 22436847 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccccgcggccgcggccgccg 94 |||||||||||||||||||| Sbjct: 27696489 ccccgcggccgcggccgccg 27696470 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 12000023 tcgccgccgccgccggcccc 12000004
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 4e-35 Identities = 165/193 (85%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 251 ccgccgccgccggccccggcgggggcggaggcgacgacatcgccagcgccgccgtcaccg 310 |||||||||||||||| ||||| || |||| |||||||| ||| |||| | |||||| Sbjct: 22429935 ccgccgccgccggcccaggcggaggaggag---acgacatcaccaccgccctcatcaccg 22429991 Query: 311 ccgtcaccttcgtcgccatcgtcacggccgccaccttcttcatggcgctgctcttctact 370 |||| |||||||||| ||||||||||||||||||| || | ||| | ||||||||| Sbjct: 22429992 ccgtgaccttcgtcgtggccgtcacggccgccaccttcctcctcgcgttcctcttctacc 22430051 Query: 371 tccgctgcacgccctgcctccgcgcctacctcggcctctccgcgatctgggtcctcctgc 430 ||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| | Sbjct: 22430052 tccgctgcacgccctgcctccgcgcctacctcggcttctcctcgctctccgtcctcctcc 22430111 Query: 431 tcctcggcggcca 443 ||||||||||||| Sbjct: 22430112 tcctcggcggcca 22430124 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 124 ctcgactccctcggcgaggacatcacccgcatcgtcggcccggtctccgcatgcatgctc 183 ||||| |||||||| ||||||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 22429808 ctcgattccctcggggaggacatcacccgcatcgtcacccccgtctccacctgcatgctc 22429867 Query: 184 atcgtcgtc 192 |||||||| Sbjct: 22429868 ctcgtcgtc 22429876 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccccgcggccgcggccgccg 94 |||||||||||||||||||| Sbjct: 27787812 ccccgcggccgcggccgccg 27787793 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 11996786 tcgccgccgccgccggcccc 11996767
>ref|NM_194693.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0020E23.10), mRNA Length = 1728 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 385 tgcctccgcgcctacctcggcctctccgcgatctgggtcctcctgctcctcggcggcca 443 ||||||||||||||| ||| | ||||| || ||| |||||||| |||||||||||||| Sbjct: 37 tgcctccgcgcctacatcgccttctcctcgctctccgtcctcctcctcctcggcggcca 95
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 385 tgcctccgcgcctacctcggcctctccgcgatctgggtcctcctgctcctcggcggcca 443 ||||||||||||||| ||| | ||||| || ||| |||||||| |||||||||||||| Sbjct: 1677825 tgcctccgcgcctacatcgccttctcctcgctctccgtcctcctcctcctcggcggcca 1677767
>gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23, complete sequence Length = 151359 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 385 tgcctccgcgcctacctcggcctctccgcgatctgggtcctcctgctcctcggcggcca 443 ||||||||||||||| ||| | ||||| || ||| |||||||| |||||||||||||| Sbjct: 74922 tgcctccgcgcctacatcgccttctcctcgctctccgtcctcctcctcctcggcggcca 74864
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 385 tgcctccgcgcctacctcggcctctccgcgatctgggtcctcctgctcctcggcggcca 443 ||||||||||||||| ||| | ||||| || ||| |||||||| |||||||||||||| Sbjct: 1677825 tgcctccgcgcctacatcgccttctcctcgctctccgtcctcctcctcctcggcggcca 1677767 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcgggggcggaggcga 284 |||||||||||||||||| | |||| || |||||||| Sbjct: 21207550 tcgccgccgccgccggcctccgcggcggaggaggcga 21207586 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||||| ||||||| Sbjct: 11431594 cgccgccgccgccggcgccggcgg 11431571
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 385 tgcctccgcgcctacctcggcctctccgcgatctgggtcctcctgctcctcggcggcca 443 ||||||||||||||| ||| | ||||| || ||| |||||||| |||||||||||||| Sbjct: 1677776 tgcctccgcgcctacatcgccttctcctcgctctccgtcctcctcctcctcggcggcca 1677718 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcgggggcggaggcga 284 |||||||||||||||||| | |||| || |||||||| Sbjct: 21218814 tcgccgccgccgccggcctccgcggcggaggaggcga 21218850 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||||| ||||||| Sbjct: 11438034 cgccgccgccgccggcgccggcgg 11438011
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||||||||||||| Sbjct: 9390 cgccgccgccgccggccccggcgg 9413
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||||||||||||| Sbjct: 106460 cgccgccgccgccggccccggcgg 106483
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||||||||||||| Sbjct: 29969708 cgccgccgccgccggccccggcgg 29969731 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccgcggccgcggccgccgtcc 97 ||||||||||||||||||||| Sbjct: 24419141 ccgcggccgcggccgccgtcc 24419121 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 24419377 tcgccgccgccgccggcccc 24419358
>ref|NM_188057.1| Oryza sativa (japonica cultivar-group), Ozsa8477 predicted mRNA Length = 702 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggaggcgacga 287 |||||||||||||||| |||||| ||||| |||||||| Sbjct: 32 cgccgccgccgccggcggcggcggcggcggcggcgacga 70
>ref|NM_190278.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2883 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggccccggcgggggcgg 278 |||||||||||||||||| |||||| ||||| Sbjct: 1487 tcgccgccgccgccggccgcggcggcggcgg 1457
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcgga 279 ||||||||||||||||| |||||| |||||| Sbjct: 30621 cgccgccgccgccggccgcggcggaggcgga 30591
>gb|AY425710.1| Triticum aestivum sucrose-phosphate synthase (SPS10) mRNA, partial cds Length = 641 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcg 271 ||||||||||||||||||||||| Sbjct: 185 cgccgccgccgccggccccggcg 163
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggaggcg 283 |||||||||||||| | ||||||| |||||||||| Sbjct: 85684 cgccgccgccgccgccaccggcggaggcggaggcg 85718
>gb|DQ471183.1| Camarops microspora isolate AFTOL-ID 1361 RNA polymerase II subunit 1 (RPB1) gene, partial sequence Length = 1184 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 296 gcgccgccgtcaccgccgtcacc 318 ||||||||||||||||||||||| Sbjct: 328 gcgccgccgtcaccgccgtcacc 306
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 291 cgccagcgccgccgtcaccgccg 313 ||||||||||||||||||||||| Sbjct: 2056312 cgccagcgccgccgtcaccgccg 2056290
>emb|AJ557012.1|HDE557012 Haloferax denitrificans nirK gene for nitrite reductase Length = 1439 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/38 (92%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 252 cgccgccgccggccccggcgggg--gcggaggcgacga 287 ||||| ||||||||||||||||| ||||||||||||| Sbjct: 736 cgccgtcgccggccccggcgggggcgcggaggcgacga 773
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 88 gccgccgtccccgtcggccgggc 110 ||||||||||||||||||||||| Sbjct: 2064727 gccgccgtccccgtcggccgggc 2064705 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgacgacatcgccagcgccg 301 |||||||||||||||||||| Sbjct: 1107931 cgacgacatcgccagcgccg 1107912
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggaggcg 283 |||||||||||||| | ||||||| |||||||||| Sbjct: 6854730 cgccgccgccgccgccaccggcggaggcggaggcg 6854764 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcgga 279 ||||||||||||||||| |||||| |||||| Sbjct: 2545735 cgccgccgccgccggccgcggcggaggcgga 2545705 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 gcccccgcggccgcggccgccg 94 |||||||||||||||||||||| Sbjct: 25560594 gcccccgcggccgcggccgccg 25560573 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 297 cgccgccgtcaccgccgtcaccttc 321 |||||||||| |||||||||||||| Sbjct: 3276915 cgccgccgtcgccgccgtcaccttc 3276891 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 21689545 cgccgccgccgccggccccg 21689564 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 14907486 cgccgccgccgccggccccg 14907505 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gcgccgccgtcaccgccgtc 315 |||||||||||||||||||| Sbjct: 13164650 gcgccgccgtcaccgccgtc 13164669 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 72 agcccccgcggccgcggccgccgtccccgtcg 103 ||||||||||||||||| || |||| |||||| Sbjct: 9270336 agcccccgcggccgcggtcgtcgtcgccgtcg 9270305 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggag 280 |||||||||||||||| |||||| ||||||| Sbjct: 3654053 cgccgccgccgccggcagcggcggaggcggag 3654084
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcgggggcgg 278 |||||||||||||||||| |||||| ||||| Sbjct: 39009568 tcgccgccgccgccggccgcggcggcggcgg 39009598 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggaggcgacga 287 |||||||||||||||| |||||| ||||| |||||||| Sbjct: 9369793 cgccgccgccgccggcggcggcggcggcggcggcgacga 9369831 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||| ||||||||| |||| Sbjct: 8290548 cgccgccgccgccgcccccggcggcggcg 8290520 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggccccggcgg 272 ||||||||||||||| ||||||||| Sbjct: 7581605 tcgccgccgccgccgcccccggcgg 7581581 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tcgactccctcggcgaggac 144 |||||||||||||||||||| Sbjct: 23797089 tcgactccctcggcgaggac 23797108 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tcgactccctcggcgaggac 144 |||||||||||||||||||| Sbjct: 23780566 tcgactccctcggcgaggac 23780585
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 agcccccgcggccgcggccgccg 94 ||||||||||||||||||||||| Sbjct: 587395 agcccccgcggccgcggccgccg 587417 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 cgccgccgccggccccggcggggg 275 ||||||||||||| |||||||||| Sbjct: 1386798 cgccgccgccggcgccggcggggg 1386821
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcgggggcgg 278 |||||||||||||||||| |||||| ||||| Sbjct: 83201 tcgccgccgccgccggccgcggcggcggcgg 83231
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcgggggcgg 278 |||||||||||||||||| |||||| ||||| Sbjct: 27548 tcgccgccgccgccggccgcggcggcggcgg 27578
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggaggcgacga 287 |||||||||||||||| |||||| ||||| |||||||| Sbjct: 40120 cgccgccgccgccggcggcggcggcggcggcggcgacga 40158
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggaggcgacga 287 |||||||||||||||| |||||| ||||| |||||||| Sbjct: 146387 cgccgccgccgccggcggcggcggcggcggcggcgacga 146425
>dbj|AK107957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-C05, full insert sequence Length = 819 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcgga 279 ||||||||||||||||| |||||| |||||| Sbjct: 133 cgccgccgccgccggccgcggcggaggcgga 163
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 gcccccgcggccgcggccgccg 94 |||||||||||||||||||||| Sbjct: 77001 gcccccgcggccgcggccgccg 76980
>gb|BC058831.1| Homo sapiens von Hippel-Lindau tumor suppressor, transcript variant 2, mRNA (cDNA clone MGC:61974 IMAGE:6457060), complete cds Length = 2703 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 113 cctccgcgcctacctcggcctc 92
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 291 cgccagcgccgccgtcaccgcc 312 |||||||||||||||||||||| Sbjct: 2058724 cgccagcgccgccgtcaccgcc 2058745 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 atcgccgccgccgccggcccc 267 ||||||||||||||||||||| Sbjct: 3964403 atcgccgccgccgccggcccc 3964423 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 3729437 gccgccgtcaccgccgtcacc 3729457 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 2797939 gccgccgtcaccgccgtcacc 2797959 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcaccttcgtcgcc 327 |||||||| |||||||||||| ||||||| Sbjct: 2797220 ccgccgtcgccgccgtcacctccgtcgcc 2797248 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 3793038 cgccgccgccgccggccccg 3793019 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 3729447 ccgccgtcaccgccgtcacc 3729466 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 2385892 cgccgccgccgccggccccg 2385911 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gcgccgccgtcaccgccgtc 315 |||||||||||||||||||| Sbjct: 2058771 gcgccgccgtcaccgccgtc 2058790 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccgccgtccccgtcggccgg 108 |||||||||||||||||||| Sbjct: 701611 ccgccgtccccgtcggccgg 701592
>ref|XM_130764.7| PREDICTED: Mus musculus TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 1 (Taf4a), mRNA Length = 4422 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggc 270 |||||||||||||||||||||| Sbjct: 972 cgccgccgccgccggccccggc 951
>ref|NM_000551.2| Homo sapiens von Hippel-Lindau tumor suppressor (VHL), transcript variant 1, mRNA Length = 2968 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 262 cctccgcgcctacctcggcctc 241
>ref|NM_198156.1| Homo sapiens von Hippel-Lindau tumor suppressor (VHL), transcript variant 2, mRNA Length = 2845 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 262 cctccgcgcctacctcggcctc 241
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 291 cgccagcgccgccgtcaccgcc 312 |||||||||||||||||||||| Sbjct: 330049 cgccagcgccgccgtcaccgcc 330070 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gcgccgccgtcaccgccgtc 315 |||||||||||||||||||| Sbjct: 330096 gcgccgccgtcaccgccgtc 330115
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 291 cgccagcgccgccgtcaccgcc 312 |||||||||||||||||||||| Sbjct: 137761 cgccagcgccgccgtcaccgcc 137782 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gcgccgccgtcaccgccgtc 315 |||||||||||||||||||| Sbjct: 137808 gcgccgccgtcaccgccgtc 137827
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 293 ccagcgccgccgtcaccgccgtcacc 318 |||||||||||||| ||||||||||| Sbjct: 19756 ccagcgccgccgtccccgccgtcacc 19781 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 293 ccagcgccgccgtcaccgccgtcacc 318 |||||||||||||| ||||||||||| Sbjct: 15965 ccagcgccgccgtccccgccgtcacc 15990
>gb|BC027957.1| Homo sapiens, Similar to von Hippel-Lindau syndrome, clone IMAGE:5210077, mRNA Length = 214 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 96 cctccgcgcctacctcggcctc 75
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 297 cgccgccgtcaccgccgtcacc 318 |||||||||||||||||||||| Sbjct: 3352370 cgccgccgtcaccgccgtcacc 3352391
>gb|AY708393.1| Mycobacterium tuberculosis strain Erdman PE_PGRS 33 gene, complete cds Length = 1506 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 cgccagcgccgccgtcaccgcc 312 |||||||||||||||||||||| Sbjct: 1378 cgccagcgccgccgtcaccgcc 1357 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 gcgccgccgtcaccgccgtc 315 |||||||||||||||||||| Sbjct: 1331 gcgccgccgtcaccgccgtc 1312
>gb|AC069461.2| Homo sapiens chromosome 3 clone RP11-1022P15 map 3p, complete sequence Length = 193214 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 171003 cctccgcgcctacctcggcctc 170982
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcgggggcggaggcgac 285 ||||||||||||||| | ||||||| ||||| |||||| Sbjct: 30142764 tcgccgccgccgccgccaccggcggcggcggcggcgac 30142801 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||| ||||||| |||| Sbjct: 10688371 cgccgccgccgccggcgccggcggcggcg 10688399 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 ggccgcggccgccgtccccgtcggc 105 |||||||||||||||||||| |||| Sbjct: 7078471 ggccgcggccgccgtccccggcggc 7078447 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 252 cgccgccgccggccccggcgggggcggaggcg 283 ||||||||||||| ||||||| ||||| |||| Sbjct: 10688399 cgccgccgccggcgccggcggcggcggcggcg 10688368 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgg 272 ||||||||||||||||| |||||| Sbjct: 7054901 cgccgccgccgccggccgcggcgg 7054924
>gb|AC022383.3|AC022383 Homo sapiens chromosome 3 clone RP11-415K13 map 3p, complete sequence Length = 188631 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 68066 cctccgcgcctacctcggcctc 68045
>gb|AF010238.1|AF010238 Homo sapiens von Hippel-Lindau tumor suppressor (VHL) gene, complete cds Length = 14543 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 763 cctccgcgcctacctcggcctc 742
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcgggggcggaggcgac 285 ||||||||||||||| | ||||||| ||||| |||||| Sbjct: 9099 tcgccgccgccgccgccaccggcggcggcggcggcgac 9136
>dbj|AP006065.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0076I16 Length = 151711 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcgggggcggaggcgac 285 ||||||||||||||| | ||||||| ||||| |||||| Sbjct: 134746 tcgccgccgccgccgccaccggcggcggcggcggcgac 134783
>gb|AC018828.4| Homo sapiens chromosome 3 clone RP11-382A21 map 3p, complete sequence Length = 178230 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 92119 cctccgcgcctacctcggcctc 92098
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggc 270 |||||||||||||||||||||| Sbjct: 96549 cgccgccgccgccggccccggc 96570
>gb|AC022384.5| Homo sapiens chromosome 3 clone RP11-438J1 map 3p, complete sequence Length = 210053 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 21102 cctccgcgcctacctcggcctc 21081
>gb|AC034193.5| Homo sapiens chromosome 3 clone RP11-572M14 map 3p, complete sequence Length = 169013 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 22218 cctccgcgcctacctcggcctc 22239
>gb|AC018808.5| Homo sapiens chromosome 3 clone RP11-1016H17 map 3p, complete sequence Length = 207708 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 18965 cctccgcgcctacctcggcctc 18986
>gb|L15409.1|HUMHIPLIND Homo sapiens (clone g7) von Hippel-Lindau disease tumor suppressor mRNA sequence Length = 1810 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cctccgcgcctacctcggcctc 408 |||||||||||||||||||||| Sbjct: 262 cctccgcgcctacctcggcctc 241
>ref|NM_187856.1| Oryza sativa (japonica cultivar-group), Ozsa8300 predicted mRNA Length = 960 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||| ||||||||| |||| Sbjct: 154 cgccgccgccgccgcccccggcggcggcg 126
>ref|XM_475605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2313 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 297 cgccgccgtcaccgccgtcaccttc 321 |||||||||| |||||||||||||| Sbjct: 1131 cgccgccgtcgccgccgtcaccttc 1155
>ref|XM_450541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1260 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccgcggccgcggccgccgtcc 97 ||||||||||||||||||||| Sbjct: 358 ccgcggccgcggccgccgtcc 338 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 526 tcgccgccgccgccggcccc 507
>ref|NM_197686.1| Oryza sativa (japonica cultivar-group) putative flavin-containing monooxygenase (OSJNBb0014I11.12), mRNA Length = 1512 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggccccggcgggggcggaggcga 284 |||||||||||||||||| | |||| || |||||||| Sbjct: 290 tcgccgccgccgccggcctccgcggcggaggaggcga 254
>ref|XM_478718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||||||| ||| |||| Sbjct: 943 cgccgccgccgccggccccgccggcggcg 915
>ref|XM_513451.1| PREDICTED: Pan troglodytes similar to Dedicator of cytokinesis protein 6 (LOC456902), mRNA Length = 2307 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 tcctcctgctcctcggcggcc 442 ||||||||||||||||||||| Sbjct: 166 tcctcctgctcctcggcggcc 186
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 ccttcgtcgccatcgtcacggccgc 341 ||||||||||||||||| ||||||| Sbjct: 1827175 ccttcgtcgccatcgtcgcggccgc 1827199
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 258 cgccggccccggcgggggcggaggc 282 |||||||| |||||||||||||||| Sbjct: 72887 cgccggcctcggcgggggcggaggc 72911
>gb|AY505474.1| Chlamydomonas reinhardtii circadian RNA-binding protein CHLAMY 1 subunit C3 mRNA, partial cds Length = 2570 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 cgccgccgccggccccggcgg 272 ||||||||||||||||||||| Sbjct: 440 cgccgccgccggccccggcgg 460
>ref|XM_425734.1| PREDICTED: Gallus gallus similar to putative sweet taste receptor T1R1 (LOC428176), mRNA Length = 2286 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ccagcgccgccgtcaccgccg 313 ||||||||||||||||||||| Sbjct: 2146 ccagcgccgccgtcaccgccg 2126
>ref|XM_418781.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 1600013P15 (LOC420681), mRNA Length = 1526 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 33 cgccgccgccgccggccccgg 13
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 cctgctcctcggcggccagat 446 ||||||||||||||||||||| Sbjct: 901735 cctgctcctcggcggccagat 901715
>ref|XM_951150.1| Neurospora crassa OR74A hypothetical protein (NCU01540.1) partial mRNA Length = 3021 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 atctgggtcctcctgctcctc 435 ||||||||||||||||||||| Sbjct: 2299 atctgggtcctcctgctcctc 2319
>ref|XM_327978.1| Neurospora crassa OR74A hypothetical protein (NCU01540.1) partial mRNA Length = 3021 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 atctgggtcctcctgctcctc 435 ||||||||||||||||||||| Sbjct: 2299 atctgggtcctcctgctcctc 2319
>ref|XM_858326.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 10 (LOC478507), mRNA Length = 2459 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 142 cgccgccgccgccggccccgg 122
>ref|XM_858309.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 9 (LOC478507), mRNA Length = 2375 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 142 cgccgccgccgccggccccgg 122
>ref|XM_858284.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 8 (LOC478507), mRNA Length = 2416 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 142 cgccgccgccgccggccccgg 122
>ref|XM_846148.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 2 (LOC478507), mRNA Length = 1320 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 142 cgccgccgccgccggccccgg 122
>ref|XM_858241.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 7 (LOC478507), mRNA Length = 2642 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 116 cgccgccgccgccggccccgg 96
>ref|XM_858223.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 6 (LOC478507), mRNA Length = 2431 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 142 cgccgccgccgccggccccgg 122
>ref|XM_858201.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 5 (LOC478507), mRNA Length = 2494 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 142 cgccgccgccgccggccccgg 122
>ref|XM_858178.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 4 (LOC478507), mRNA Length = 2459 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 116 cgccgccgccgccggccccgg 96
>ref|XM_858157.1| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 3 (LOC478507), mRNA Length = 1305 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 142 cgccgccgccgccggccccgg 122
>ref|XM_535686.2| PREDICTED: Canis familiaris similar to lymphoid enhancer binding factor-1, transcript variant 1 (LOC478507), mRNA Length = 776 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 116 cgccgccgccgccggccccgg 96
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 3862728 cgccgccgccgccggccccgg 3862708
>ref|XM_838471.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1389) partial mRNA Length = 1599 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 ccttcgtcgccatcgtcacggccgc 341 ||||||||||||||||| ||||||| Sbjct: 1567 ccttcgtcgccatcgtcgcggccgc 1591
>ref|XM_750706.1| Aspergillus fumigatus Af293 eukaryotic translation initiation factor 3 subunit EifCd (Afu2g14670) partial mRNA Length = 1758 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 tcctcctgctcctcggcggcc 442 ||||||||||||||||||||| Sbjct: 1730 tcctcctgctcctcggcggcc 1710
>gb|BC063837.1| Homo sapiens cDNA clone IMAGE:6178557, partial cds Length = 2029 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 26 gccgccgtcaccgccgtcacc 6
>gb|AF153714.1| Pseudomonas sp. BG33R strain BG33R GTP-binding protein-like protein gene, partial cds Length = 624 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 129 gccgccgtcaccgccgtcacc 109
>gb|AY373324.1| Gallus gallus sine oculis related homeobox 3 mRNA, complete cds Length = 1009 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 180 cgccgccgccgccggccccgg 160
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 gccggccccggcgggggcgga 279 ||||||||||||||||||||| Sbjct: 393674 gccggccccggcgggggcgga 393694
>emb|BX011523.1|CNS08H1Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA18BG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 830 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 73 gcccccgcggccgcggccgccgtccccgt 101 |||||||| ||||| |||||||||||||| Sbjct: 493 gcccccgccgccgccgccgccgtccccgt 521
>emb|Y15106.1|GGCSIX3 Gallus gallus mRNA for cSIX3 protein Length = 1204 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 355 cgccgccgccgccggccccgg 335
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 atcgccgccgccgccggcccc 267 ||||||||||||||||||||| Sbjct: 155084 atcgccgccgccgccggcccc 155104
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 269450 gccgccgtcaccgccgtcacc 269470 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 334500 cgccgccgccgccggccccg 334481 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 269460 ccgccgtcaccgccgtcacc 269479
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 29415 gccgccgtcaccgccgtcacc 29435 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcaccttcgtcgcc 327 |||||||| |||||||||||| ||||||| Sbjct: 28696 ccgccgtcgccgccgtcacctccgtcgcc 28724
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 atcgccgccgccgccggcccc 267 ||||||||||||||||||||| Sbjct: 164475 atcgccgccgccgccggcccc 164495
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 247808 gccgccgtcaccgccgtcacc 247828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 247818 ccgccgtcaccgccgtcacc 247837
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 258249 gccgccgtcaccgccgtcacc 258269 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcaccttcgtcgcc 327 |||||||| |||||||||||| ||||||| Sbjct: 257533 ccgccgtcgccgccgtcacctccgtcgcc 257561
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ggccgccgtccccgtcggccgggcg 111 |||||| |||||||||||||||||| Sbjct: 129333 ggccgcggtccccgtcggccgggcg 129357
>emb|AL670002.1|NCB24G3 Neurospora crassa DNA linkage group II BAC clone B24G3 Length = 77166 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 atctgggtcctcctgctcctc 435 ||||||||||||||||||||| Sbjct: 34097 atctgggtcctcctgctcctc 34117
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccgcggccgcggccgccgtcc 97 ||||||||||||||||||||| Sbjct: 135552 ccgcggccgcggccgccgtcc 135532 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 135788 tcgccgccgccgccggcccc 135769
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggccccggcgggggcggaggcga 284 |||||||||||||||||| | |||| || |||||||| Sbjct: 126809 tcgccgccgccgccggcctccgcggcggaggaggcga 126773
>gb|AC103923.2| Homo sapiens chromosome 1 clone RP11-230B22, complete sequence Length = 185624 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 tcctcctgctcctcggcggcc 442 ||||||||||||||||||||| Sbjct: 43675 tcctcctgctcctcggcggcc 43655
>gb|AY040530.1| Gallus gallus helix-loop-helix protein (Id4a) mRNA, complete cds Length = 1172 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcggg 273 ||||||||||||| ||||||||||| Sbjct: 323 cgccgccgccgcccgccccggcggg 299
>gb|AY040529.1| Gallus gallus helix-loop-helix protein (Id4) mRNA, complete cds Length = 1104 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcggg 273 ||||||||||||| ||||||||||| Sbjct: 323 cgccgccgccgcccgccccggcggg 299
>gb|AY517644.1| Chlamydomonas reinhardtii phosphoenolpyruvate carboxylase (Ppc1) mRNA, complete cds Length = 3902 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 cagcgccgccgtcaccgccgtcacc 318 |||||||||||||||||||| |||| Sbjct: 3007 cagcgccgccgtcaccgccgccacc 2983
>emb|BX932419.2| Gallus gallus finished cDNA, clone ChEST628j15 Length = 1290 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 33 cgccgccgccgccggccccgg 13
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 agcgccgccgtcaccgccgtc 315 ||||||||||||||||||||| Sbjct: 10828359 agcgccgccgtcaccgccgtc 10828379 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccgcggccgcggccgccgtcc 97 ||||||||||||||||||||| Sbjct: 9565822 ccgcggccgcggccgccgtcc 9565802 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgacatcgccagcgccgccgtcac 308 ||||||||||||||||| |||||| Sbjct: 17234775 cgacatcgccagcgccggcgtcac 17234798 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 9565990 tcgccgccgccgccggcccc 9565971
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||||||| ||| |||| Sbjct: 22374290 cgccgccgccgccggccccgccggcggcg 22374262 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 cagcccccgcggccgcggccgccg 94 ||||| |||||||||||||||||| Sbjct: 25047193 cagccgccgcggccgcggccgccg 25047170 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggccccggcg 271 |||||||||||||||| ||||||| Sbjct: 24294656 tcgccgccgccgccggacccggcg 24294679 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 21257415 cgccgccgccgccggccccg 21257396
>gb|AC156446.2| Volvox carteri clone JGIAOBO-29H23, complete sequence Length = 31927 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gccgccgccgccggccccggc 270 ||||||||||||||||||||| Sbjct: 13967 gccgccgccgccggccccggc 13987
>emb|BX930475.1| Gallus gallus finished cDNA, clone ChEST636l24 Length = 1315 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 25 cgccgccgccgccggccccgg 5
>ref|NM_204282.1| Gallus gallus inhibitor of DNA binding 4, dominant negative helix-loop-helix protein (ID4), mRNA Length = 1172 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcggg 273 ||||||||||||| ||||||||||| Sbjct: 323 cgccgccgccgcccgccccggcggg 299
>ref|NM_204364.1| Gallus gallus sine oculis homeobox homolog 3 (Drosophila) (SIX3), mRNA Length = 1204 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 355 cgccgccgccgccggccccgg 335
>gb|DQ119605.1| Anniella pulchra HOXA13 (HOXA13) gene, partial cds Length = 436 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 416 cgccgccgccgccggccccgg 396
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggccccggcgg 272 ||||||||||||||| ||||||||| Sbjct: 130397 tcgccgccgccgccgcccccggcgg 130373
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||| ||||||||| |||| Sbjct: 84479 cgccgccgccgccgcccccggcggcggcg 84451
>gb|AY757356.1| Mustela vison lymphoid enhancer binding factor 1 (Lef-1) mRNA, complete cds, alternatively spliced Length = 2496 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccgg 269 ||||||||||||||||||||| Sbjct: 127 cgccgccgccgccggccccgg 107
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||||||| ||| |||| Sbjct: 179536 cgccgccgccgccggccccgccggcggcg 179508
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||||||| ||| |||| Sbjct: 35357 cgccgccgccgccggccccgccggcggcg 35329
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccccggcgggggcggaggcga 284 ||||||||||||||||||||| Sbjct: 155204 ccccggcgggggcggaggcga 155224
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 agcgccgccgtcaccgccgtc 315 ||||||||||||||||||||| Sbjct: 52082 agcgccgccgtcaccgccgtc 52102
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 cagcgccgccgtcaccgccgt 314 ||||||||||||||||||||| Sbjct: 5034634 cagcgccgccgtcaccgccgt 5034614 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 tcgtcgccatcgtcacggccgcca 343 |||||||||||| ||||||||||| Sbjct: 3846174 tcgtcgccatcggcacggccgcca 3846197
>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036B02 Length = 168253 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||| ||||||| |||| Sbjct: 41434 cgccgccgccgccggcgccggcggcggcg 41462 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 252 cgccgccgccggccccggcgggggcggaggcg 283 ||||||||||||| ||||||| ||||| |||| Sbjct: 41462 cgccgccgccggcgccggcggcggcggcggcg 41431
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 ggccgcggccgccgtccccgtcggc 105 |||||||||||||||||||| |||| Sbjct: 99258 ggccgcggccgccgtccccggcggc 99234 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgg 272 ||||||||||||||||| |||||| Sbjct: 75688 cgccgccgccgccggccgcggcgg 75711
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccgcggccgcggccgccgtcc 97 ||||||||||||||||||||| Sbjct: 5919 ccgcggccgcggccgccgtcc 5899 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 6087 tcgccgccgccgccggcccc 6068
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccgcggccgcggccgccgtcc 97 ||||||||||||||||||||| Sbjct: 129458 ccgcggccgcggccgccgtcc 129438 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 129626 tcgccgccgccgccggcccc 129607
>dbj|AK120878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027I19, full insert sequence Length = 1760 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggccccggcgggggcggaggcga 284 |||||||||||||||||| | |||| || |||||||| Sbjct: 455 tcgccgccgccgccggcctccgcggcggaggaggcga 419
>gb|AF083096.1|AF083096 Canis familiaris transcription factor HOXA13 (HOXA13) gene, partial cds Length = 390 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cccccgcggccgcggccgccg 94 ||||||||||||||||||||| Sbjct: 136 cccccgcggccgcggccgccg 116
>gb|AF083095.1|AF083095 Felis catus transcription factor HOXA13 (HOXA13) gene, partial cds Length = 393 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cccccgcggccgcggccgccg 94 ||||||||||||||||||||| Sbjct: 136 cccccgcggccgcggccgccg 116
>dbj|AK108426.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-A07, full insert sequence Length = 989 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||||||| ||| |||| Sbjct: 209 cgccgccgccgccggccccgccggcggcg 181
>dbj|AK107275.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-A04, full insert sequence Length = 2661 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 297 cgccgccgtcaccgccgtcaccttc 321 |||||||||| |||||||||||||| Sbjct: 1226 cgccgccgtcgccgccgtcaccttc 1250
>dbj|AK101781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P19, full insert sequence Length = 1279 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||| ||||||||| |||| Sbjct: 179 cgccgccgccgccgcccccggcggcggcg 151
>dbj|AK073778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070D07, full insert sequence Length = 1313 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||| ||||||||| |||| Sbjct: 214 cgccgccgccgccgcccccggcggcggcg 186
>dbj|AK059089.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B08, full insert sequence Length = 1743 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||| ||||||| |||| Sbjct: 368 cgccgccgccgccggcgccggcggcggcg 340 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 252 cgccgccgccggccccggcgggggcggaggcg 283 ||||||||||||| ||||||| ||||| |||| Sbjct: 340 cgccgccgccggcgccggcggcggcggcggcg 371
>dbj|AK058424.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-D12, full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcg 277 |||||||||||||||| ||||||| |||| Sbjct: 368 cgccgccgccgccggcgccggcggcggcg 340 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 252 cgccgccgccggccccggcgggggcggaggcg 283 ||||||||||||| ||||||| ||||| |||| Sbjct: 340 cgccgccgccggcgccggcggcggcggcggcg 371
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 atcgccgccgccgccggccccggcg 271 |||||||||||||||||| |||||| Sbjct: 2533087 atcgccgccgccgccggcgccggcg 2533063 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gcccccgcggccgcggccgcc 93 ||||||||||||||||||||| Sbjct: 1348699 gcccccgcggccgcggccgcc 1348719
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccgcggccgcggccgccgtcc 97 ||||||||||||||||||||| Sbjct: 12463 ccgcggccgcggccgccgtcc 12443 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 12699 tcgccgccgccgccggcccc 12680
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccccggcgggggcggaggcga 284 ||||||||||||||||||||| Sbjct: 1734596 ccccggcgggggcggaggcga 1734576
>gb|AC127360.3| Mus musculus BAC clone RP23-125F9 from 15, complete sequence Length = 192315 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gccgccgtcaccgccgtcacc 318 ||||||||||||||||||||| Sbjct: 86192 gccgccgtcaccgccgtcacc 86212
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 ccgccgccggccccggcgggg 274 ||||||||||||||||||||| Sbjct: 624126 ccgccgccggccccggcgggg 624146
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 297 cgccgccgtcaccgccgtcaccttc 321 |||||||||| |||||||||||||| Sbjct: 70739 cgccgccgtcgccgccgtcaccttc 70715
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gcccagcccccgcggccgcggccg 91 |||| ||||||||||||||||||| Sbjct: 150614 gccccgcccccgcggccgcggccg 150591 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 gcccagcccccgcggccgcggccg 91 |||| ||||||||||||||||||| Sbjct: 123395 gccccgcccccgcggccgcggccg 123418 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gcccagcccccgcggccgcggccg 91 |||| ||||||||||||||||||| Sbjct: 135 gccccgcccccgcggccgcggccg 112
>gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin biosynthesis gene cluster, complete sequence Length = 75439 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 300 cgccgtcaccgccgtcaccttcgtcgcc 327 ||||||||||||||||||| ||||||| Sbjct: 46238 cgccgtcaccgccgtcaccgccgtcgcc 46211
>gb|DQ242507.1| Myxococcus xanthus DK 1622 PilG (pilG), PilH (pilH), PilI (pilI), PilD (pilD), PilS2 (pilS2), PilR2 (pilR2), PilM (pilM), PilN (pilN), PilO (pilO), PilP (pilP), and PilQ (pilQ) genes, complete cds; and unknown gene Length = 13124 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 tcacggccgccaccttcttcatgg 355 |||||||||||| ||||||||||| Sbjct: 8493 tcacggccgccaacttcttcatgg 8516
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cctcggcgaggacatcaccc 151 |||||||||||||||||||| Sbjct: 3655046 cctcggcgaggacatcaccc 3655065
>ref|XM_481307.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2229 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cccccgcggccgcggccgcc 93 |||||||||||||||||||| Sbjct: 173 cccccgcggccgcggccgcc 154
>ref|XM_480467.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3096 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcggag 280 |||||||||||||||| |||||| ||||||| Sbjct: 2401 cgccgccgccgccggctgcggcggcggcggag 2370
>ref|XM_480059.1| Oryza sativa (japonica cultivar-group), mRNA Length = 931 Score = 40.1 bits (20), Expect = 6.0 Identities = 37/42 (88%), Gaps = 3/42 (7%) Strand = Plus / Plus Query: 249 cgccgccgccgccggc---cccggcgggggcggaggcgacga 287 |||||||||||||||| |||||||| ||||| |||||||| Sbjct: 399 cgccgccgccgccggcgagcccggcggcggcggcggcgacga 440
>ref|XM_475644.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 7053 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcggag 280 |||||||||||||||| |||||| ||||||| Sbjct: 66 cgccgccgccgccggcagcggcggaggcggag 35
>gb|DQ215182.1| Taeniopygia guttata clone 0058P0023D01 nascent-polypeptide-associated complex alpha polypeptide-like mRNA, complete sequence Length = 801 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 32 cgccgccgccgccggccccg 13
>gb|DQ215181.1| Taeniopygia guttata clone 0058P0008G11 nascent-polypeptide-associated complex alpha polypeptide-like mRNA, complete sequence Length = 801 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 20 cgccgccgccgccggccccg 1
>ref|XM_464611.1| Oryza sativa (japonica cultivar-group), mRNA Length = 462 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 405 cgccgccgccgccggccccg 424
>ref|XM_465375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1827 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 ||||||||||||||||| |||||| Sbjct: 231 cgccgccgccgccggccgcggcgg 208
>ref|NM_001030756.1| Gallus gallus nuclear factor (erythroid-derived 2)-like 1 (NFE2L1), mRNA Length = 4302 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 35 cgccgccgccgccggccccg 16
>ref|NM_196152.1| Oryza sativa (japonica cultivar-group) putative hydrolase (OSJNBa0091J06.21), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||||| ||||||| Sbjct: 55 cgccgccgccgccggcgccggcgg 32
>ref|XM_517037.1| PREDICTED: Pan troglodytes similar to HMGIC fusion partner-like protein 4 (LOC461031), mRNA Length = 909 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 401 cgccgccgccgccggccccg 420
>ref|XM_469388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccccgcggccgcggccgccg 94 |||||||||||||||||||| Sbjct: 412 ccccgcggccgcggccgccg 393
>ref|XM_479122.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 cagcccccgcggccgcggccgccg 94 ||||| |||||||||||||||||| Sbjct: 127 cagccgccgcggccgcggccgccg 104
>ref|XM_479008.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3330 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggccccggcg 271 |||||||||||||||| ||||||| Sbjct: 3317 tcgccgccgccgccggacccggcg 3294
>ref|XM_478579.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1340 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 314 cgccgccgccgccggccccg 333
>ref|NM_005986.2| Homo sapiens SRY (sex determining region Y)-box 1 (SOX1), mRNA Length = 4108 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ccgccgccgccggccccggcgggg 274 ||||||||||| |||||||||||| Sbjct: 155 ccgccgccgcccgccccggcgggg 132
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03, complete sequence Length = 146278 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 58402 cgccgccgccgccggccccg 58421
>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0109A13, complete sequence Length = 134258 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 133828 cgccgccgccgccggccccg 133847
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 72 agcccccgcggccgcggccgccgtccccgtcg 103 ||||||||||||||||| || |||| |||||| Sbjct: 42281 agcccccgcggccgcggtcgtcgtcgccgtcg 42250
>gb|AC112970.18| Mus musculus chromosome 17, clone RP24-443D19, complete sequence Length = 172747 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccctgcctccgcgcctacc 400 |||||||||||||||||||| Sbjct: 152594 gccctgcctccgcgcctacc 152613
>gb|AY022704.1| Oryza sativa microsatellite MRG5029 containing (CCG)X8, closest to marker L449, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggc 276 |||||||||||||| | ||||||||||| Sbjct: 105 cgccgccgccgccgccgccggcgggggc 132
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 ccgccgccggccccggcggg 273 |||||||||||||||||||| Sbjct: 176242 ccgccgccggccccggcggg 176223
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggaggcga 284 |||||||||||||| | ||||||| ||||| ||||| Sbjct: 122576 cgccgccgccgccgacgccggcggcggcggcggcga 122611
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 80721 cgccgccgccgccggccccg 80740
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 72 agcccccgcggccgcggccgccgtccccgtcg 103 ||||||||||||||||| || |||| |||||| Sbjct: 146991 agcccccgcggccgcggtcgtcgtcgccgtcg 146960
>gb|AY260902.1| Rhodospirillum centenum che2 gene cluster, complete sequence Length = 11332 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gacatcgccagcgccgccgt 305 |||||||||||||||||||| Sbjct: 2382 gacatcgccagcgccgccgt 2401
>ref|XM_600754.2| PREDICTED: Bos taurus frizzled homolog 1 (Drosophila) (FZD1), mRNA Length = 3710 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||| ||||||||| Sbjct: 58 cgccgccgccgccgcccccggcgg 35
>ref|XM_423949.1| PREDICTED: Gallus gallus similar to mevalonate kinase (LOC426286), mRNA Length = 1993 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gccgccgccgccggccccgg 269 |||||||||||||||||||| Sbjct: 909 gccgccgccgccggccccgg 890
>ref|XM_600319.2| PREDICTED: Bos taurus similar to H6 homeo box 3 (LOC522046), mRNA Length = 1080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gcccccgcggccgcggccgc 92 |||||||||||||||||||| Sbjct: 983 gcccccgcggccgcggccgc 964
>ref|XM_369144.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00100.4) partial mRNA Length = 606 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 cgccgccgtcaccgccgtca 316 |||||||||||||||||||| Sbjct: 279 cgccgccgtcaccgccgtca 260
>ref|XM_422620.1| PREDICTED: Gallus gallus similar to mKIAA0617 protein (LOC424804), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 110 cgccgccgccgccggccccg 129
>ref|XM_417174.1| PREDICTED: Gallus gallus similar to hypothetical protein MGC2714 (LOC418980), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 306 cgccgccgccgccggccccg 287
>ref|XM_592835.2| PREDICTED: Bos taurus similar to GC-rich sequence DNA-binding factor homolog (LOC514918), mRNA Length = 4803 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggccccggcgggggcggaggcgac 285 ||||||||||| |||||||||||| Sbjct: 312 ggccccggcggcggcggaggcgac 335
>gb|AE008983.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 9 of 256 of the complete sequence Length = 9958 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 acatcacccgcatcgtcggcccgg 166 |||||||||||| ||||||||||| Sbjct: 3802 acatcacccgcagcgtcggcccgg 3825
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 1106847 ccgccgtcaccgccgtcacc 1106866
>ref|XR_004221.1| PREDICTED: Mus musculus similar to rRNA promoter binding protein (LOC673388), mRNA Length = 1051 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 658 tcgccgccgccgccggcccc 677
>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0082F22, complete sequence Length = 176038 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gcgccgccgtcaccgccgtc 315 |||||||||||||||||||| Sbjct: 127427 gcgccgccgtcaccgccgtc 127446
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggag 280 |||||||||||||||| |||||| ||||||| Sbjct: 76400 cgccgccgccgccggcagcggcggaggcggag 76431
>ref|XM_001000601.1| PREDICTED: Mus musculus RIKEN cDNA 2310061I04 gene (2310061I04Rik), mRNA Length = 1253 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccctgcctccgcgcctacc 400 |||||||||||||||||||| Sbjct: 168 gccctgcctccgcgcctacc 187
>ref|XM_001002280.1| PREDICTED: Mus musculus RIKEN cDNA 2310061I04 gene (2310061I04Rik), mRNA Length = 1253 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccctgcctccgcgcctacc 400 |||||||||||||||||||| Sbjct: 168 gccctgcctccgcgcctacc 187
>ref|XM_128627.9| PREDICTED: Mus musculus RIKEN cDNA 2310061I04 gene, transcript variant 1 (2310061I04Rik), mRNA Length = 1253 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccctgcctccgcgcctacc 400 |||||||||||||||||||| Sbjct: 168 gccctgcctccgcgcctacc 187
>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence Length = 255036 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggccccggcgggggcggaggcgac 285 ||||||||||||||||| |||||| Sbjct: 40998 ggccccggcgggggcgggggcgac 41021
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cggccgggcggccgccacca 121 |||||||||||||||||||| Sbjct: 966365 cggccgggcggccgccacca 966384
>ref|XM_844146.1| PREDICTED: Canis familiaris similar to SRY (sex determining region Y)-box 1 (LOC607464), mRNA Length = 1212 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ccgccgccgccggccccggc 270 |||||||||||||||||||| Sbjct: 95 ccgccgccgccggccccggc 76
>ref|XM_533104.2| PREDICTED: Canis familiaris similar to Mitochondrial processing peptidase beta subunit, mitochondrial precursor (Beta-MPP) (P-52) (LOC475897), mRNA Length = 1650 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 33 ccgccgtcaccgccgtcacc 14
>ref|XM_389968.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09792.1) partial mRNA Length = 885 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 atcgccgccgccgccggccccggc 270 |||||||||||||||| ||||||| Sbjct: 504 atcgccgccgccgccgtccccggc 527
>ref|XM_539218.2| PREDICTED: Canis familiaris similar to cysteine and histidine rich 1 isoform 1 (LOC482097), mRNA Length = 1896 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 453 cgccgccgccgccggccccg 434
>gb|AE004327.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 235 of 251 of the complete chromosome Length = 16140 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atcgtcacggccgccacctt 347 |||||||||||||||||||| Sbjct: 15210 atcgtcacggccgccacctt 15229
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis gene cluster, partial sequence Length = 103450 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ccccgtcggccgggcggccg 115 |||||||||||||||||||| Sbjct: 6809 ccccgtcggccgggcggccg 6828
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cagcgccgccgtcaccgccg 313 |||||||||||||||||||| Sbjct: 4488263 cagcgccgccgtcaccgccg 4488244
>emb|AL138691.15| Human DNA sequence from clone RP11-310D8 on chromosome 13 Contains the SOX1 gene for SRY (sex determining region Y)-box 1 protein and 7 CpG islands, complete sequence Length = 147665 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ccgccgccgccggccccggcgggg 274 ||||||||||| |||||||||||| Sbjct: 15753 ccgccgccgcccgccccggcgggg 15776
>emb|AL035703.21|HS61A9 Human DNA sequence from clone RP1-61A9 on chromosome 1p35.2-36.13 Contains a novel gene (KIAA0478) and the EPHA8 gene for ephrin receptor EphA8 precursor, complete sequence Length = 160705 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggc 276 |||||||||||||| ||| ||||||||| Sbjct: 65814 cgccgccgccgccgccccgggcgggggc 65841
>ref|XM_963601.1| PREDICTED: Tribolium castaneum similar to CG13503-PF, isoform F (LOC657123), mRNA Length = 1506 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 41 cgccgccgccgccggccccg 60
>ref|XM_795256.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC585658 (LOC585658), mRNA Length = 1323 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 362 ccgccgtcaccgccgtcacc 343
>emb|Y13436.1|HSSOX1 Homo sapiens sox1 gene Length = 4091 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ccgccgccgccggccccggcgggg 274 ||||||||||| |||||||||||| Sbjct: 155 ccgccgccgcccgccccggcgggg 132
>emb|X56336.1|OSRAMY3A O.sativa RAmy3A gene for alpha-amylase Length = 2625 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgacatcgccagcgccgccgtcac 308 ||||||||||||||||| |||||| Sbjct: 743 cgacatcgccagcgccggcgtcac 766
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cagcgccgccgtcaccgccg 313 |||||||||||||||||||| Sbjct: 2345974 cagcgccgccgtcaccgccg 2345993
>emb|BX883048.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 7/11 Length = 349943 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gccctgcctccgcgcctacc 400 |||||||||||||||||||| Sbjct: 116476 gccctgcctccgcgcctacc 116457
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 308612 cgccgccgccgccggccccg 308631
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccgccgtccccgtcggccgg 108 |||||||||||||||||||| Sbjct: 15890 ccgccgtccccgtcggccgg 15871
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 ccgccgtcaccttcgtcgcc 327 |||||||||||||||||||| Sbjct: 260806 ccgccgtcaccttcgtcgcc 260787
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 162713 cgccgccgccgccggccccg 162732
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccgccgtccccgtcggccgg 108 |||||||||||||||||||| Sbjct: 34408 ccgccgtccccgtcggccgg 34389
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cggccgcggccgccgtcccc 99 |||||||||||||||||||| Sbjct: 15148 cggccgcggccgccgtcccc 15167
>gb|AY278320.1| Homo sapiens lipoma HMGIC fusion partner-like protein 4 mRNA, complete cds Length = 1444 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 255 cgccgccgccgccggccccg 274
>emb|AJ719867.1| Gallus gallus mRNA for hypothetical protein, clone 7g14 Length = 4302 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 35 cgccgccgccgccggccccg 16
>gb|AY648960.2| Rubrivivax gelatinosus strain 1 superoxide dismutase (sodA) gene, partial cds; hypothetical protein (orf158), CtpA (ctpA), CcoS (ccoS), Cbb3-type cytochrome oxidase subunit 1 (ccoN), Cbb3-type cytochrome oxidase subunit 2 (ccoO), CcoQ (ccoQ), Cbb3-type cytochrome oxidase subunit 3 (ccoP), ferredoxin (ccoG), hypothetical protein (orf86), global transcriptional regulator (fnrL), and anaerobic coproporphyrinogen III oxidase (hemN2) genes, complete cds; and hypothetical protein gene, partial cds Length = 11731 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgccgtcaccttcgtcgcca 328 |||||||||||||||||||| Sbjct: 1629 cgccgtcaccttcgtcgcca 1648
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||| ||||||||||||| Sbjct: 449178 cgccgccgcccccggccccggcgg 449155
>gb|AC011846.16| Homo sapiens chromosome 15, clone RP11-346A8, complete sequence Length = 147760 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cccgcggccgcggccgccgtcccc 99 |||||||||||||||| ||||||| Sbjct: 11961 cccgcggccgcggccggcgtcccc 11984
>ref|NM_198560.1| Homo sapiens lipoma HMGIC fusion partner-like protein 4 (LOC375323), mRNA Length = 1444 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 255 cgccgccgccgccggccccg 274
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence Length = 198295 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cccgcggccgcggccgccgtcccc 99 |||||||||||||||| ||||||| Sbjct: 62926 cccgcggccgcggccggcgtcccc 62903
>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0091J06 from chromosome 10, complete sequence Length = 141911 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||||| ||||||| Sbjct: 124665 cgccgccgccgccggcgccggcgg 124642
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||||| ||||||| Sbjct: 15587 cgccgccgccgccggcgccggcgg 15564
>gb|AY065570.1|AY065570S1 Zea mays clone tac 907.49 5' Ac insertion site sequence Length = 636 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tcctcctgctcctcggcggc 441 |||||||||||||||||||| Sbjct: 418 tcctcctgctcctcggcggc 399
>gb|AC104701.5| Homo sapiens BAC clone RP11-772N1 from 4, complete sequence Length = 152547 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccccgcggccgcggccgccg 94 |||||||||||||||||||| Sbjct: 138116 ccccgcggccgcggccgccg 138135
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 acatcacccgcatcgtcggcccgg 166 |||||||||||| ||||||||||| Sbjct: 95113 acatcacccgcagcgtcggcccgg 95136
>dbj|AK133917.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730522K16 product:hypothetical protein, full insert sequence Length = 2507 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 1470 tcgccgccgccgccggcccc 1451
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgccgtcaccttcgtcgcca 328 |||||||||||||||||||| Sbjct: 1133 cgccgtcaccttcgtcgcca 1152
>dbj|AK154459.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630036A16 product:hypothetical protein, full insert sequence Length = 4754 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 1229 tcgccgccgccgccggcccc 1210
>gb|U77931.1|RNU77931 Rattus norvegicus rRNA promoter binding protein mRNA, complete cds Length = 1038 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 275 tcgccgccgccgccggcccc 294
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 gccgccgtccccgtcggccgggcg 111 ||||||||||||| |||||||||| Sbjct: 4099349 gccgccgtccccggcggccgggcg 4099326 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 3636131 ccgccgtcaccgccgtcacc 3636150 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 3636122 ccgccgtcaccgccgtcacc 3636141 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gccggccccggcgggggcgg 278 |||||||||||||||||||| Sbjct: 3148490 gccggccccggcgggggcgg 3148509 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 2602846 ccgccgtcaccgccgtcacc 2602827
>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete sequence Length = 212960 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 165798 cgccgccgccgccggccccg 165817
>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence Length = 180084 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggccccggcgggggcggaggcgac 285 ||||||||||||||||| |||||| Sbjct: 96845 ggccccggcgggggcgggggcgac 96868
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 ccgccgtcaccttcgtcgcc 327 |||||||||||||||||||| Sbjct: 4373548 ccgccgtcaccttcgtcgcc 4373567
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||| ||||||||||||||||||| Sbjct: 178174 cgccaccgccgccggccccggcgg 178151 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 gccgccgccgccggccccggcggg 273 |||||||||||||||| ||||||| Sbjct: 120390 gccgccgccgccggccgcggcggg 120413
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cagcccccgcggccgcggccgccg 94 ||||| |||||||||||||||||| Sbjct: 41960 cagccgccgcggccgcggccgccg 41983
>tpg|BK000964.1| TPA: TPA_exp: Mus musculus ribosomal DNA, complete repeating unit Length = 45309 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 11105 tcgccgccgccgccggcccc 11086
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgg 272 |||||||||||||| ||||||||| Sbjct: 3032398 cgccgccgccgccgtccccggcgg 3032375
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccggcgggggcggaggcga 284 |||||||||||||| | ||||||| ||||| ||||| Sbjct: 8895651 cgccgccgccgccgacgccggcggcggcggcggcga 8895616
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccccgcggccgcggccgcc 93 |||||||||||||||||||| Sbjct: 11461294 cccccgcggccgcggccgcc 11461313 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgggggcggag 280 |||||||||||||||| |||||| ||||||| Sbjct: 5269215 cgccgccgccgccggctgcggcggcggcggag 5269246 Score = 40.1 bits (20), Expect = 6.0 Identities = 37/42 (88%), Gaps = 3/42 (7%) Strand = Plus / Plus Query: 249 cgccgccgccgccggc---cccggcgggggcggaggcgacga 287 |||||||||||||||| |||||||| ||||| |||||||| Sbjct: 2489133 cgccgccgccgccggcgagcccggcggcggcggcggcgacga 2489174
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ccgcggccgcggccgccgtccccg 100 |||||||||||||||||| ||||| Sbjct: 25637923 ccgcggccgcggccgccgcccccg 25637900 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 24676759 tcgccgccgccgccggcccc 24676778 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgg 272 ||||||||||||||||| |||||| Sbjct: 14231637 cgccgccgccgccggccgcggcgg 14231660 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 6322968 cgccgccgccgccggccccg 6322949
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 20603 tcgccgccgccgccggcccc 20584
>gb|AC156451.2| Volvox carteri clone JGIAOBO-45F10, complete sequence Length = 35415 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 2069 cgccgccgccgccggccccg 2088
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgccgtcaccttcgtcgcca 328 |||||||||||||||||||| Sbjct: 405 cgccgtcaccttcgtcgcca 424
>gb|AC026172.3|AC026172 Homo sapiens chromosome 3 clone RP11-168L3 map 3p, complete sequence Length = 181598 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 53279 cgccgccgccgccggccccg 53298
>ref|NM_147136.1| Rattus norvegicus rRNA promoter binding protein (LOC257642), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tcgccgccgccgccggcccc 267 |||||||||||||||||||| Sbjct: 275 tcgccgccgccgccggcccc 294
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tccccatctcctccccgaga 50 |||||||||||||||||||| Sbjct: 124375 tccccatctcctccccgaga 124356
>gb|AC123764.18| Homo sapiens chromosome 17, clone CTC-784N20, complete sequence Length = 144000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 92231 cgccgccgccgccggccccg 92212 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 92201 cgccgccgccgccggccccg 92182 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 92171 cgccgccgccgccggccccg 92152 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 92141 cgccgccgccgccggccccg 92122 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 92111 cgccgccgccgccggccccg 92092 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 92081 cgccgccgccgccggccccg 92062 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 92051 cgccgccgccgccggccccg 92032 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 92021 cgccgccgccgccggccccg 92002 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 91991 cgccgccgccgccggccccg 91972 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 91961 cgccgccgccgccggccccg 91942 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 91934 cgccgccgccgccggccccg 91915
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tcgactccctcggcgaggac 144 |||||||||||||||||||| Sbjct: 158270 tcgactccctcggcgaggac 158289
>emb|BX935584.1| Gallus gallus finished cDNA, clone ChEST82d11 Length = 1226 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 312 cgccgccgccgccggccccg 293
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 6255858 cgccgccgccgccggccccg 6255877
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccccgcggccgcggccgccg 94 |||||||||||||||||||| Sbjct: 117405 ccccgcggccgcggccgccg 117424
>ref|XM_231763.3| PREDICTED: Rattus norvegicus nuclear factor, erythroid derived 2, like 3 (predicted) (Nfe2l3_predicted), mRNA Length = 3024 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 tcctcctgctcctcggcggccaga 445 ||||||| |||||||||||||||| Sbjct: 1118 tcctcctcctcctcggcggccaga 1095
>gb|AC007850.29|AC007850 Homo sapiens 3 BAC CTB-237N12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157872 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 22528 cgccgccgccgccggccccg 22509
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccccgcggccgcggccgcc 93 |||||||||||||||||||| Sbjct: 15428 cccccgcggccgcggccgcc 15447
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccgccgccgccggccccg 268 |||||||||||||||||||| Sbjct: 120355 cgccgccgccgccggccccg 120336
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 406 ctctccgcgatctgggtcctcctgctcctcggcggc 441 ||||||||||||| ||| || ||| ||||||||||| Sbjct: 1205951 ctctccgcgatctcggtgctgctgatcctcggcggc 1205986
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ccgccgtcaccgccgtcacc 318 |||||||||||||||||||| Sbjct: 621305 ccgccgtcaccgccgtcacc 621286
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tcgactccctcggcgaggac 144 |||||||||||||||||||| Sbjct: 77674 tcgactccctcggcgaggac 77693 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tcgactccctcggcgaggac 144 |||||||||||||||||||| Sbjct: 61151 tcgactccctcggcgaggac 61170
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgacatcgccagcgccgccgtcac 308 ||||||||||||||||| |||||| Sbjct: 21647 cgacatcgccagcgccggcgtcac 21670
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 cgccgccgccgccggccccggcgg 272 ||||||||||||||||| |||||| Sbjct: 114328 cgccgccgccgccggccgcggcgg 114351
>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0571B09 Length = 147382 Score = 40.1 bits (20), Expect = 6.0 Identities = 37/42 (88%), Gaps = 3/42 (7%) Strand = Plus / Plus Query: 249 cgccgccgccgccggc---cccggcgggggcggaggcgacga 287 |||||||||||||||| |||||||| ||||| |||||||| Sbjct: 3490 cgccgccgccgccggcgagcccggcggcggcggcggcgacga 3531 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,639,285 Number of Sequences: 3902068 Number of extensions: 3639285 Number of successful extensions: 260576 Number of sequences better than 10.0: 335 Number of HSP's better than 10.0 without gapping: 356 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 231931 Number of HSP's gapped (non-prelim): 28555 length of query: 446 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 424 effective length of database: 17,147,199,772 effective search space: 7270412703328 effective search space used: 7270412703328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
