Clone Information

BLAST Search Result

Clone Name	baet92d01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS20_GLUOX (Q5FN16) 30S ribosomal protein S20	40	0.004
2	RS20_THEMA (Q9X1Y7) 30S ribosomal protein S20	35	0.099
3	RS20_SHISS (Q3Z5Y7) 30S ribosomal protein S20	34	0.17
4	RS20_SHIDS (Q32K74) 30S ribosomal protein S20	34	0.17
5	RS20_SHIBS (Q326K0) 30S ribosomal protein S20	34	0.17
6	RS20_SALTY (P0A2B1) 30S ribosomal protein S20	34	0.17
7	RS20_SALTI (P0A2B2) 30S ribosomal protein S20	34	0.17
8	RS20_SALPA (Q5PDM2) 30S ribosomal protein S20	34	0.17
9	RS20_SALCH (Q57TL8) 30S ribosomal protein S20	34	0.17
10	RS20_ECOLI (P0A7U7) 30S ribosomal protein S20	34	0.17
11	RS20_ECOL6 (P0A7U8) 30S ribosomal protein S20	34	0.17
12	RS20_ECO57 (P0A7U9) 30S ribosomal protein S20	34	0.17
13	RS20_COXBU (Q83ED6) 30S ribosomal protein S20	34	0.17
14	RS20_THEFY (Q47RQ2) 30S ribosomal protein S20	34	0.22
15	RS20_VIBPA (Q87S93) 30S ribosomal protein S20	33	0.29
16	RS20_PROMA (Q7VA27) 30S ribosomal protein S20	33	0.37
17	RS20_IDILO (Q5QZS3) 30S ribosomal protein S20	33	0.37
18	RS20_PSEHT (Q3IEA5) 30S ribosomal protein S20	33	0.49
19	RS20_PHOPR (Q6LUL5) 30S ribosomal protein S20	33	0.49
20	RS20_MYCTU (P66505) 30S ribosomal protein S20	33	0.49
21	RS20_MYCBO (P66506) 30S ribosomal protein S20	33	0.49
22	RS20_COLP3 (Q486U3) 30S ribosomal protein S20	33	0.49
23	PTTG_PONPY (Q5NVI6) Pituitary tumor-transforming gene 1 protein-...	33	0.49
24	PTTG_HUMAN (P53801) Pituitary tumor-transforming gene 1 protein-...	33	0.49
25	RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20	32	0.64
26	RS20_METCA (Q605N0) 30S ribosomal protein S20	32	0.64
27	RS20_THIDA (Q3SHS6) 30S ribosomal protein S20	32	0.83
28	RS20_PHOLL (Q7N8X4) 30S ribosomal protein S20	32	0.83
29	RS20_FRATT (Q5NEF7) 30S ribosomal protein S20	32	0.83
30	DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-)...	32	0.83
31	RS20_MANSM (Q65RP7) 30S ribosomal protein S20	32	1.1
32	RS20_YERPS (Q66ES6) 30S ribosomal protein S20	31	1.4
33	RS20_YERPE (Q8ZIM3) 30S ribosomal protein S20	31	1.4
34	RS20_VIBVY (Q7MNN1) 30S ribosomal protein S20	31	1.4
35	RS20_VIBVU (Q8DES4) 30S ribosomal protein S20	31	1.4
36	RS20_VIBCH (O34239) 30S ribosomal protein S20	31	1.4
37	RS20_SHEON (Q8EBH9) 30S ribosomal protein S20	31	1.4
38	RS20_PASMU (Q9CKG0) 30S ribosomal protein S20	31	1.4
39	RS20_HAEDU (Q7VKC6) 30S ribosomal protein S20	31	1.4
40	RS20_FUSNN (Q8RHW1) 30S ribosomal protein S20	31	1.4
41	RS20_DESPS (Q6AMS8) 30S ribosomal protein S20	31	1.4
42	CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alph...	31	1.4
43	CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel al...	31	1.4
44	CAC1H_RAT (Q9EQ60) Voltage-dependent T-type calcium channel alph...	31	1.4
45	RS20_PROMM (Q7TUR7) 30S ribosomal protein S20	31	1.9
46	RS20_NITOC (Q3J6R8) 30S ribosomal protein S20	31	1.9
47	RS20_KLEPN (P45601) 30S ribosomal protein S20 (Fragment)	31	1.9
48	RS20_ERWCT (Q6D0C1) 30S ribosomal protein S20	31	1.9
49	VPHE_NPVAC (P24728) Polyhedral envelope protein (PE) (Polyhedral...	30	2.4
50	DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (...	30	2.4
51	RS20_PROMI (P42275) 30S ribosomal protein S20 (Fragment)	30	2.4
52	RS20_HAEIN (P44959) 30S ribosomal protein S20	30	2.4
53	RS20_HAEI8 (Q4QLU2) 30S ribosomal protein S20	30	2.4
54	RS20_BORBU (P49394) 30S ribosomal protein S20	30	2.4
55	RS20_XYLFT (P66513) 30S ribosomal protein S20	30	3.2
56	RS20_XYLFA (P66512) 30S ribosomal protein S20	30	3.2
57	RS20_NEIMB (P66508) 30S ribosomal protein S20	30	3.2
58	RS20_NEIMA (P66507) 30S ribosomal protein S20	30	3.2
59	RS20_NEIG1 (Q5F6Q6) 30S ribosomal protein S20	30	3.2
60	RS20_MYCLE (O33132) 30S ribosomal protein S20	30	3.2
61	T2_MOUSE (Q06666) Octapeptide-repeat protein T2	30	3.2
62	PTTG_RAT (Q6P767) Pituitary tumor-transforming gene 1 protein-in...	30	4.1
63	RS20_XANOR (Q5H2E4) 30S ribosomal protein S20	30	4.1
64	RS20_XANCP (Q8PBG9) 30S ribosomal protein S20	30	4.1
65	RS20_XANC8 (Q4US37) 30S ribosomal protein S20	30	4.1
66	RS20_XANC5 (Q3BW45) 30S ribosomal protein S20	30	4.1
67	RS20_XANAC (Q8PN22) 30S ribosomal protein S20	30	4.1
68	RS20_DECAR (Q47BL6) 30S ribosomal protein S20	29	5.4
69	RS20_BORGA (Q662D1) 30S ribosomal protein S20	29	5.4
70	PTTG_MOUSE (Q8R143) Pituitary tumor-transforming gene 1 protein-...	29	5.4
71	ADA2C_RAT (P22086) Alpha-2C adrenergic receptor (Alpha-2C adreno...	29	5.4
72	ADA2C_MOUSE (Q01337) Alpha-2C adrenergic receptor (Alpha-2C adre...	29	5.4
73	CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alph...	29	7.1
74	NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 pr...	29	7.1
75	NOTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 prec...	29	7.1
76	RS20_PROMT (Q46J20) 30S ribosomal protein S20	29	7.1
77	NOP14_KLULA (Q6CT09) Probable nucleolar complex protein 14	28	9.2
78	UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (E...	28	9.2
79	RR20_GUITH (O78486) Chloroplast 30S ribosomal protein S20	28	9.2
80	GCC1_HUMAN (Q96CN9) GRIP and coiled-coil domain-containing prote...	28	9.2

>RS20_GLUOX (Q5FN16) 30S ribosomal protein S20|
          Length = 89

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQ 411
           S +KR RQN+R R RN AR + MRT +KKV  A++   K A A+
Sbjct: 6   SARKRIRQNERRRERNVARMSRMRTFIKKVELAIQAGDKSAAAE 49

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>RS20_THEMA (Q9X1Y7) 30S ribosomal protein S20|
          Length = 96

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKK 399
           S KKR R +++ R+RN A K   + R+K+V +A+E    K
Sbjct: 6   SAKKRVRVSEKRRLRNKAYKTFFKNRIKEVLKAIENKEPK 45

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>RS20_SHISS (Q3Z5Y7) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_SHIDS (Q32K74) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_SHIBS (Q326K0) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_SALTY (P0A2B1) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_SALTI (P0A2B2) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_SALPA (Q5PDM2) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_SALCH (Q57TL8) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_ECOLI (P0A7U7) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_ECOL6 (P0A7U8) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_ECO57 (P0A7U9) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_COXBU (Q83ED6) 30S ribosomal protein S20|
          Length = 90

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 12/33 (36%), Positives = 25/33 (75%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           KKR RQN++  + N ++++ +RT +KK+ ++L+
Sbjct: 8   KKRARQNEKRELHNASQRSAVRTAVKKILKSLQ 40

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>RS20_THEFY (Q47RQ2) 30S ribosomal protein S20|
          Length = 92

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S KKR RQN++ R+RN A K+ ++T ++K   A E
Sbjct: 6   SQKKRIRQNEKARLRNKAVKSSLKTAIRKFREAAE 40

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>RS20_VIBPA (Q87S93) 30S ribosomal protein S20|
          Length = 86

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q ++ R  N +R++ MRT MKK   A+E   K+A
Sbjct: 6   SAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIEAGDKEA 46

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>RS20_PROMA (Q7VA27) 30S ribosomal protein S20|
          Length = 99

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +1

Query: 277 DSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRA 378
           +S KKR +  +R+RI+N   K+ MRT MK+ F A
Sbjct: 5   NSAKKRIQIAERNRIQNRTYKSAMRTLMKRCFEA 38

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>RS20_IDILO (Q5QZS3) 30S ribosomal protein S20|
          Length = 86

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q +++R  N +R++ MRT +K+V  A+E   K+A
Sbjct: 6   SAKKRAIQAEKNRRHNASRRSMMRTYLKRVNAAIETKDKEA 46

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>RS20_PSEHT (Q3IEA5) 30S ribosomal protein S20|
          Length = 86

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQ 411
           S KKR   ++++R  N +R++ MRT  KKV  A+E   K+A  Q
Sbjct: 6   SAKKRAITSEKNRQHNASRRSMMRTYFKKVIVAIEAGDKEAAQQ 49

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>RS20_PHOPR (Q6LUL5) 30S ribosomal protein S20|
          Length = 86

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKK------ADAQP 414
           S KKR   +++ R  N +R++ MRT  KKV  A+E   K+      AD QP
Sbjct: 6   SAKKRAITSEKRRQHNASRRSMMRTFFKKVIAAIEAGEKENATKAFADMQP 56

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>RS20_MYCTU (P66505) 30S ribosomal protein S20|
          Length = 86

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPXXXXXXXKMISEAYK 459
           S +KR R N+R R+RN A K+ +RT + + FR       KA A         K+   A K
Sbjct: 6   SQQKRNRTNERARLRNKAVKSSLRTAV-RAFREAAHAGDKAKAAELLASTNRKLDKAASK 64

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>RS20_MYCBO (P66506) 30S ribosomal protein S20|
          Length = 86

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPXXXXXXXKMISEAYK 459
           S +KR R N+R R+RN A K+ +RT + + FR       KA A         K+   A K
Sbjct: 6   SQQKRNRTNERARLRNKAVKSSLRTAV-RAFREAAHAGDKAKAAELLASTNRKLDKAASK 64

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>RS20_COLP3 (Q486U3) 30S ribosomal protein S20|
          Length = 86

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           KKR  Q+++ R  N +R++ MRT +KKV  A+E
Sbjct: 8   KKRAGQSEKRRQHNASRRSMMRTLVKKVLAAIE 40

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>PTTG_PONPY (Q5NVI6) Pituitary tumor-transforming gene 1 protein-interacting|
           protein precursor (Pituitary tumor-transforming gene
           protein-binding factor) (PTTG-binding factor) (PBF)
          Length = 180

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 241 CAAEPPKTGRQPD-SVKKRERQNDRHRIRNHARKAEMRTRMKKV 369
           C     K  R+PD S +K  R+ +  RIR   R+AEM+TR  ++
Sbjct: 118 CCCCRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRHDEI 161

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>PTTG_HUMAN (P53801) Pituitary tumor-transforming gene 1 protein-interacting|
           protein precursor (Pituitary tumor-transforming gene
           protein-binding factor) (PTTG-binding factor) (PBF)
          Length = 180

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 241 CAAEPPKTGRQPD-SVKKRERQNDRHRIRNHARKAEMRTRMKKV 369
           C     K  R+PD S +K  R+ +  RIR   R+AEM+TR  ++
Sbjct: 118 CCCCRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRHDEI 161

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>RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20|
          Length = 98

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKK 399
           + KKR    +R+R+RN   K+ +RT MK+ F A E   K+
Sbjct: 6   AAKKRIEIAERNRLRNRTYKSALRTLMKRCFVACEAYSKE 45

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>RS20_METCA (Q605N0) 30S ribosomal protein S20|
          Length = 92

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S KKR RQ + +R  N A ++ +RT +KKV  A++
Sbjct: 6   SAKKRARQAENNRAHNAALRSRLRTYIKKVILAVD 40

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>RS20_THIDA (Q3SHS6) 30S ribosomal protein S20|
          Length = 87

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           +KR RQ    R  N ++++E+RT +KKV +A+E   K A
Sbjct: 8   RKRARQASAQRDHNMSQRSELRTAIKKVRKAIEAGDKAA 46

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>RS20_PHOLL (Q7N8X4) 30S ribosomal protein S20|
          Length = 87

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N +R++ +RT +KKV+ A+    K+A
Sbjct: 6   SAKKRAIQSEKRRKHNASRRSMVRTFIKKVYAAIATGDKEA 46

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>RS20_FRATT (Q5NEF7) 30S ribosomal protein S20|
          Length = 90

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEK 387
           KKR  Q +R+R  N AR++ MRT +KK   A+EK
Sbjct: 8   KKRIIQAERNRQHNVARRSMMRTFLKKTAYAIEK 41

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>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box|
           protein 8) (RNA helicase HRH1)
          Length = 1220

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +1

Query: 199 ASTGRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRA 378
           ++ G+ ++R  +     +  K  R  D  + R+R  +R+R R+H R+   R+R +   R 
Sbjct: 155 SAAGQEKQRDAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRE 214

Query: 379 LEKLRKK 399
             K++ +
Sbjct: 215 RNKVKSR 221

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>RS20_MANSM (Q65RP7) 30S ribosomal protein S20|
          Length = 89

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N ++++ MRT +KKV+ A+    K A
Sbjct: 8   SAKKRAVQSEKSRQHNASQRSMMRTYIKKVYAAVAAGEKAA 48

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>RS20_YERPS (Q66ES6) 30S ribosomal protein S20|
          Length = 87

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 381
           S KKR  Q+++ R  N +R++ +RT +KKV+ A+
Sbjct: 6   SAKKRAVQSEKRRKHNASRRSMVRTFIKKVYAAI 39

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>RS20_YERPE (Q8ZIM3) 30S ribosomal protein S20|
          Length = 87

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 381
           S KKR  Q+++ R  N +R++ +RT +KKV+ A+
Sbjct: 6   SAKKRAVQSEKRRKHNASRRSMVRTFIKKVYAAI 39

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>RS20_VIBVY (Q7MNN1) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q ++ R  N +R++ MRT MKK   A+    K+A
Sbjct: 6   SAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIAAGDKEA 46

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>RS20_VIBVU (Q8DES4) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q ++ R  N +R++ MRT MKK   A+    K+A
Sbjct: 6   SAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIAAGDKEA 46

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>RS20_VIBCH (O34239) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q ++ R  N +R++ MRT MKK   A+    K+A
Sbjct: 6   SAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIAAGDKEA 46

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>RS20_SHEON (Q8EBH9) 30S ribosomal protein S20|
          Length = 88

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 381
           S KKR  Q+++ R  N +R++ +RT +KKV  A+
Sbjct: 6   SAKKRALQSEKRRQHNASRRSMLRTYVKKVIAAI 39

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>RS20_PASMU (Q9CKG0) 30S ribosomal protein S20|
          Length = 89

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 381
           S KKR  Q+++ R  N ++++ MRT +KKV+ A+
Sbjct: 8   SAKKRAIQSEKRRQHNASQRSMMRTYIKKVYAAV 41

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>RS20_HAEDU (Q7VKC6) 30S ribosomal protein S20|
          Length = 89

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 381
           S KKR  Q+++ R  N ++++ MRT +KKV+ A+
Sbjct: 8   SAKKRAVQSEKRRQHNASQRSMMRTFIKKVYAAI 41

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>RS20_FUSNN (Q8RHW1) 30S ribosomal protein S20|
          Length = 90

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S KKR    +R+R+RN A K  ++T  KKV   +E
Sbjct: 6   SAKKRILVAERNRVRNQAVKTRVKTMAKKVLSTIE 40

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>RS20_DESPS (Q6AMS8) 30S ribosomal protein S20|
          Length = 89

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S +KR RQN   R+RN + +  M+  ++K+  ALE
Sbjct: 6   SAEKRNRQNQVARLRNKSTRTAMKNSVRKLDEALE 40

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>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.3)
            (CaVT.3)
          Length = 2201

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 313  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQP 414
            H+ R H    E R R +K  R LEK R+KA   P
Sbjct: 1394 HKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLP 1427

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>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.3)
            (Ca(v)3.3)
          Length = 2223

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 313  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQP 414
            H+ R H    E R R +K  R LEK R+KA   P
Sbjct: 1435 HKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLP 1468

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>CAC1H_RAT (Q9EQ60) Voltage-dependent T-type calcium channel alpha-1H subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.2)
          Length = 2359

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 313  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQP 414
            H+ R H    E R R +K  R LE+ R+KA  +P
Sbjct: 1570 HKCRQHQEAEEARRREEKRLRRLERRRRKAQRRP 1603



 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = +2

Query: 149 ACRPPTPPSPSVGSEPXXXXXXXXXXXCRWCAPPSRPRLEDS 274
           AC PP+PPSP  G              C    P  R R+  S
Sbjct: 554 ACAPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARVAHS 595

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>RS20_PROMM (Q7TUR7) 30S ribosomal protein S20|
          Length = 100

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRA 378
           S KKR +  +R+R+ N + K+ MRT MK+ F A
Sbjct: 6   SSKKRVQIAERNRLENKSYKSAMRTLMKRCFSA 38

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>RS20_NITOC (Q3J6R8) 30S ribosomal protein S20|
          Length = 87

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 381
           +KR RQ    R+RN  +++ MRT +KK+ +A+
Sbjct: 8   RKRARQAGVRRVRNAGQRSMMRTYVKKIVKAI 39

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>RS20_KLEPN (P45601) 30S ribosomal protein S20 (Fragment)|
          Length = 72

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +1

Query: 289 KRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           KR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 1   KRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 38

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>RS20_ERWCT (Q6D0C1) 30S ribosomal protein S20|
          Length = 87

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL----EKLRKKA--DAQP 414
           S KKR  Q+++ R  N + ++ MRT +KKV+ A+    +++ +KA  D QP
Sbjct: 6   SAKKRAVQSEKRRKHNASSRSMMRTFIKKVYAAIATGDKEVAQKAFNDMQP 56

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>VPHE_NPVAC (P24728) Polyhedral envelope protein (PE) (Polyhedral calyx|
           protein)
          Length = 252

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 292 RERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKAD 405
           R R   R R R+ +R +  R   +++F ALEK+R + D
Sbjct: 127 RPRSRSRSRSRSRSRSSSPRRGRRQIFDALEKIRHQND 164

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>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1018

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +1

Query: 268 RQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           R PDS  KR +++DR   R H+R+   R+R ++  R  ++ R+ +
Sbjct: 25  RSPDS--KRSKKDDRTASRTHSRRERSRSRERRRSRERKRQRRSS 67

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>RS20_PROMI (P42275) 30S ribosomal protein S20 (Fragment)|
          Length = 72

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 289 KRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           KR  Q+++ R  N +R++ MRT +KKV+ A+    K+A
Sbjct: 1   KRAVQSEKRRQHNASRRSMMRTYIKKVYAAVASGDKEA 38

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>RS20_HAEIN (P44959) 30S ribosomal protein S20|
          Length = 86

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N ++++ MRT +KKV+  +    K A
Sbjct: 5   SAKKRAVQSEKRRQHNASQRSMMRTYIKKVYAQVAAGEKSA 45

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>RS20_HAEI8 (Q4QLU2) 30S ribosomal protein S20|
          Length = 89

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           S KKR  Q+++ R  N ++++ MRT +KKV+  +    K A
Sbjct: 8   SAKKRAVQSEKRRQHNASQRSMMRTYIKKVYAQVAAGEKSA 48

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>RS20_BORBU (P49394) 30S ribosomal protein S20|
          Length = 85

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +1

Query: 268 RQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPXXXXXXXKMIS 447
           R+  S  KR RQN + +IRN + K+E++T  K+    + K  KK +A         K+ +
Sbjct: 2   RKNASALKRSRQNLKRKIRNVSVKSELKTIEKRCINMI-KAGKKDEAIEFFKFVAKKLDT 60

Query: 448 EAYK 459
            A K
Sbjct: 61  AARK 64

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>RS20_XYLFT (P66513) 30S ribosomal protein S20|
          Length = 89

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 381
           S KKR +Q      RN A+++ +RT +KKV +AL
Sbjct: 6   SAKKRVKQTVVRNERNTAQRSMLRTAVKKVIKAL 39

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>RS20_XYLFA (P66512) 30S ribosomal protein S20|
          Length = 89

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 381
           S KKR +Q      RN A+++ +RT +KKV +AL
Sbjct: 6   SAKKRVKQTVVRNERNTAQRSMLRTAVKKVIKAL 39

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>RS20_NEIMB (P66508) 30S ribosomal protein S20|
          Length = 87

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           +KR RQ+ + R  N + +   RT +KKV +A+E   K A
Sbjct: 8   RKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAA 46

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>RS20_NEIMA (P66507) 30S ribosomal protein S20|
          Length = 87

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           +KR RQ+ + R  N + +   RT +KKV +A+E   K A
Sbjct: 8   RKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAA 46

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>RS20_NEIG1 (Q5F6Q6) 30S ribosomal protein S20|
          Length = 87

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           +KR RQ+ + R  N + +   RT +KKV +A+E   K A
Sbjct: 8   RKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAA 46

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>RS20_MYCLE (O33132) 30S ribosomal protein S20|
          Length = 86

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQ 411
           S +KR R N+R R+RN + K+ +RT ++    A+    K+  A+
Sbjct: 6   SQQKRNRTNERARLRNKSVKSSLRTAVRAFREAVHAGEKEKAAK 49

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>T2_MOUSE (Q06666) Octapeptide-repeat protein T2|
          Length = 185

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 217 RRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAE-MRTRMKKVFRALEKLR 393
           R+RG +     E  + GR+ +  + RER+ +R R R   R+AE  R R ++  R  E  R
Sbjct: 70  RQRGRERGREVERHRRGREAERQRGREREAERQRGREAEREAERQRERQRERQRGREAER 129

Query: 394 KK 399
           ++
Sbjct: 130 QR 131

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>PTTG_RAT (Q6P767) Pituitary tumor-transforming gene 1 protein-interacting|
           protein precursor (Pituitary tumor-transforming gene
           protein-binding factor) (PTTG-binding factor) (PBF)
          Length = 174

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 241 CAAEPPKTGRQPDSVKKRE-RQNDRHRIRNHARKAEMRTRMKKV 369
           C     K  R+PD   +R  R+ +  R+R   R+AEM++R  ++
Sbjct: 115 CCCCRRKRSRKPDKSDERAMREQEERRVRQEERRAEMKSRHDEI 158

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>RS20_XANOR (Q5H2E4) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTIVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_XANCP (Q8PBG9) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTVVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_XANC8 (Q4US37) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTVVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_XANC5 (Q3BW45) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTIVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_XANAC (Q8PN22) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTIVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_DECAR (Q47BL6) 30S ribosomal protein S20|
          Length = 89

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 286 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 402
           +KR RQ D  R  N + ++ +RT +K+V +A+E   K A
Sbjct: 8   RKRARQADGQRSHNASLRSTLRTAIKRVRQAIEAGDKAA 46

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>RS20_BORGA (Q662D1) 30S ribosomal protein S20|
          Length = 85

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 268 RQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRK 396
           R+  S  KR RQN + +IRN + ++E++T  K+    ++  RK
Sbjct: 2   RKNASALKRSRQNLKRKIRNVSVESELKTIEKRCINMIKAGRK 44

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>PTTG_MOUSE (Q8R143) Pituitary tumor-transforming gene 1 protein-interacting|
           protein precursor (Pituitary tumor-transforming gene
           protein-binding factor) (PTTG-binding factor) (PBF)
          Length = 174

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 259 KTGRQPDSVKKRE-RQNDRHRIRNHARKAEMRTRMKKV 369
           K  R+PD   +R  R+ +  R+R   R+AEM++R  ++
Sbjct: 121 KKSRKPDKSDERAMREQEERRVRQEERRAEMKSRHDEI 158

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>ADA2C_RAT (P22086) Alpha-2C adrenergic receptor (Alpha-2C adrenoceptor)|
           (Alpha-2C adrenoreceptor) (Alpha-2 adrenergic receptor
           subtype C4)
          Length = 458

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 175 PIGGFGASAST--GRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAE 345
           P G  GAS +T  G  +  G    CA  PP+T  +PD     ER+  R  +R   R+ E
Sbjct: 250 PAGPDGASPTTENGLGKAAGENGHCA--PPRTEVEPDESSAAERRRRRGALRRGGRRRE 306

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>ADA2C_MOUSE (Q01337) Alpha-2C adrenergic receptor (Alpha-2C adrenoceptor)|
           (Alpha-2C adrenoreceptor) (Alpha-2 adrenergic receptor
           subtype C4)
          Length = 458

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 175 PIGGFGASAST--GRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAE 345
           P G  GAS +T  G  +  G    CA  PP+T  +PD     ER+  R  +R   R+ E
Sbjct: 250 PAGPDGASPTTENGLGKAAGENGHCA--PPRTEVEPDESSAAERRRRRGALRRGGRRRE 306

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>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.1)
          Length = 2254

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 313  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQ 411
            H+ R H  + E R R +K  R LEK R+  + Q
Sbjct: 1520 HKCRQHQEEEEARRREEKRLRRLEKKRRSKEKQ 1552

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>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            (Motch B) [Contains: Notch 2 extracellular truncation;
            Notch 2 intracellular domain]
          Length = 2470

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -3

Query: 370  KPSSSGCASRPCGHGCEC 317
            K   SGCAS PC HG  C
Sbjct: 1370 KDCESGCASNPCQHGGTC 1387

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>NOTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            [Contains: Notch 2 extracellular truncation; Notch 2
            intracellular domain]
          Length = 2471

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -3

Query: 370  KPSSSGCASRPCGHGCEC 317
            K   SGCAS PC HG  C
Sbjct: 1372 KDCESGCASNPCQHGGTC 1389

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>RS20_PROMT (Q46J20) 30S ribosomal protein S20|
          Length = 98

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = +1

Query: 277 DSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRK------KADAQPXXXXXXXK 438
           +S KKR +  +R+R+ N   K+ +RT MK+ F A     K      KAD Q        K
Sbjct: 5   NSAKKRIQIAERNRLENKNYKSTVRTLMKRCFVACGIFEKEPGDESKADLQKTFNLAFSK 64

Query: 439 M 441
           +
Sbjct: 65  I 65

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>NOP14_KLULA (Q6CT09) Probable nucleolar complex protein 14|
          Length = 837

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 7/103 (6%)
 Frame = +1

Query: 178 IGGFGASASTGRLRRRGL--QVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMR 351
           +GG         L+  GL  Q        K G+ P    + ERQ    RIR      +++
Sbjct: 1   MGGSQLKNLKAALKANGLTGQTNVKKSSKKKGKSPREFDREERQKTIERIREQFNPFDVK 60

Query: 352 T-RMKKVFRALEKLRKKADAQPXXXXXX----XKMISEAYKPS 465
           T R KKV    E   K A  +P           KM  EA K S
Sbjct: 61  TNRNKKVGVMRESAAKLAVGKPGITKQAGEDQRKMFYEAKKSS 103

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>UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 10)
           (Ubiquitin-specific-processing protease 10)
           (Deubiquitinating enzyme 10) (Disrupter of telomere
           silencing protein 4)
          Length = 792

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +1

Query: 193 ASASTGRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDR--HRIRNHA--RKAEMRTR 357
           A+ +TG  +   L    + EPP +  + D V K E +     H  R++   RKA ++ R
Sbjct: 105 AADATGAKKSAELSTELSTEPPSSSSEDDKVGKEEEEEGEIFHEARDYVEPRKASLKER 163

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>RR20_GUITH (O78486) Chloroplast 30S ribosomal protein S20|
          Length = 95

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 280 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 384
           S  KR   N+R+R+RN   K+ ++T  KK   A+E
Sbjct: 6   SAIKRIELNERNRLRNKTYKSMLKTYYKKCIVAIE 40

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>GCC1_HUMAN (Q96CN9) GRIP and coiled-coil domain-containing protein 1 (Golgi|
           coiled coil protein 1)
          Length = 775

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/97 (21%), Positives = 46/97 (47%)
 Frame = +1

Query: 160 SYAAFPIGGFGASASTGRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARK 339
           +YAA  + GF     T +L R   ++    +  +  +     + +E Q +  R+++H + 
Sbjct: 279 AYAAEQMEGF--ELQTKQLTREVEELKSELQAIRDEKNQPDPRLQELQEEAARLKSHFQ- 335

Query: 340 AEMRTRMKKVFRALEKLRKKADAQPXXXXXXXKMISE 450
           A+++  M+K   A ++LR+++  +          ISE
Sbjct: 336 AQLQQEMRKTALAEDQLRQQSQVEEQRVAALENQISE 372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.126    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,687,531
Number of Sequences: 219361
Number of extensions: 754388
Number of successful extensions: 3881
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 3403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3866
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

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full-length cDNA and EST

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BLAST Search Result